BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB2114 (PAB2114) DE:Hypothetical protein (212 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||H75148 hypothetical protein PAB2114 - Pyrococcus abyssi (st... 450 e-126 pir||H71188 hypothetical protein PH1784 - Pyrococcus horikoshii ... 370 e-102 gb|AAG14895.1|AF298156_1 (AF298156) metallopeptidase-2 [Pyrococc... 323 9e-88 >pir||H75148 hypothetical protein PAB2114 - Pyrococcus abyssi (strain Orsay) >gi|5457781|emb|CAB49271.1| (AJ248284) hypothetical protein [Pyrococcus abyssi] Length = 212 Score = 450 bits (1146), Expect = e-126 Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 MDKIAFVYMGGDEFEWLFFEVYDRVNRYLRDVGLGVTLVYAGRIKLPPGMLIRVETEDGY 60 MDKIAFVYMGGDEFEWLFFEVYDRVNRYLRDVGLGVTLVYAGRIKLPPGMLIRVETEDGY Sbjct: 1 MDKIAFVYMGGDEFEWLFFEVYDRVNRYLRDVGLGVTLVYAGRIKLPPGMLIRVETEDGY 60 Query: 61 VKMYSFEAVVEALYGKLVEMKNSVNDDSFTKIFGITTLPIGSRKQYFEIYKKYLGIEVSI 120 VKMYSFEAVVEALYGKLVEMKNSVNDDSFTKIFGITTLPIGSRKQYFEIYKKYLGIEVSI Sbjct: 61 VKMYSFEAVVEALYGKLVEMKNSVNDDSFTKIFGITTLPIGSRKQYFEIYKKYLGIEVSI 120 Query: 121 GNYNVLVLSIKPFYTENRELFIERVFKGVLHELGHLYGLPHCNNDCVMNPPEDLREWDLR 180 GNYNVLVLSIKPFYTENRELFIERVFKGVLHELGHLYGLPHCNNDCVMNPPEDLREWDLR Sbjct: 121 GNYNVLVLSIKPFYTENRELFIERVFKGVLHELGHLYGLPHCNNDCVMNPPEDLREWDLR 180 Query: 181 APTYCNPCLMELKRKLKPKPPLLHRAYGCSHC 212 APTYCNPCLMELKRKLKPKPPLLHRAYGCSHC Sbjct: 181 APTYCNPCLMELKRKLKPKPPLLHRAYGCSHC 212 >pir||H71188 hypothetical protein PH1784 - Pyrococcus horikoshii >gi|3258220|dbj|BAA30903.1| (AP000007) 212aa long hypothetical protein [Pyrococcus horikoshii] Length = 212 Score = 370 bits (941), Expect = e-102 Identities = 166/212 (78%), Positives = 189/212 (88%) Query: 1 MDKIAFVYMGGDEFEWLFFEVYDRVNRYLRDVGLGVTLVYAGRIKLPPGMLIRVETEDGY 60 M++IAFVYMGGDEF+WLFFEVYDRV R+++DV LG+ +YAG+IKLPPGML+RV +GY Sbjct: 1 MERIAFVYMGGDEFKWLFFEVYDRVRRFMKDVNLGIIPIYAGKIKLPPGMLVRVNAGNGY 60 Query: 61 VKMYSFEAVVEALYGKLVEMKNSVNDDSFTKIFGITTLPIGSRKQYFEIYKKYLGIEVSI 120 +KMY FEAVVEALYGKLVEM++ V DD+ TKIFGITT PIGSRKQYF+IYKKYLGI+VSI Sbjct: 61 IKMYPFEAVVEALYGKLVEMRDDVKDDTLTKIFGITTFPIGSRKQYFDIYKKYLGIQVSI 120 Query: 121 GNYNVLVLSIKPFYTENRELFIERVFKGVLHELGHLYGLPHCNNDCVMNPPEDLREWDLR 180 GNYNVL LSIKPFYTENRELF+ERVFKGVLHE+GHLYGL HC NDCVMNPP DL++WD R Sbjct: 121 GNYNVLALSIKPFYTENRELFVERVFKGVLHEIGHLYGLSHCKNDCVMNPPNDLKDWDRR 180 Query: 181 APTYCNPCLMELKRKLKPKPPLLHRAYGCSHC 212 AP+YCN CL ELKRK+KP P LLHRAY C HC Sbjct: 181 APSYCNSCLRELKRKVKPMPLLLHRAYECFHC 212 >gb|AAG14895.1|AF298156_1 (AF298156) metallopeptidase-2 [Pyrococcus furiosus] Length = 204 Score = 323 bits (820), Expect = 9e-88 Identities = 148/202 (73%), Positives = 173/202 (85%) Query: 1 MDKIAFVYMGGDEFEWLFFEVYDRVNRYLRDVGLGVTLVYAGRIKLPPGMLIRVETEDGY 60 MD IAF YMGG E+EWLFFEVYDRV R+ RDV L + +VYAG+I LPPG LIRVET G+ Sbjct: 1 MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGF 60 Query: 61 VKMYSFEAVVEALYGKLVEMKNSVNDDSFTKIFGITTLPIGSRKQYFEIYKKYLGIEVSI 120 V MYSFEAVVEALYGKLVEM++ VNDDS TKIFGITT PIGSR +YF+IYKKYLGI+V++ Sbjct: 61 VNMYSFEAVVEALYGKLVEMRDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNV 120 Query: 121 GNYNVLVLSIKPFYTENRELFIERVFKGVLHELGHLYGLPHCNNDCVMNPPEDLREWDLR 180 G+Y+VL LSIKPF+TEN+ LFIERVFKGVLHE+GHLYGL HC+ DCVMNPP+D+++WDLR Sbjct: 121 GDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLSHCHEDCVMNPPKDIKDWDLR 180 Query: 181 APTYCNPCLMELKRKLKPKPPL 202 PTYCN CL +LK K + P L Sbjct: 181 TPTYCNTCLRKLKNKEELMPKL 202 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.324 0.145 0.455 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87581124 Number of Sequences: 2977 Number of extensions: 3793600 Number of successful extensions: 7654 Number of sequences better than 1.0e-10: 3 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7651 Number of HSP's gapped (non-prelim): 3 length of query: 212 length of database: 189,106,746 effective HSP length: 48 effective length of query: 164 effective length of database: 160,379,370 effective search space: 26302216680 effective search space used: 26302216680 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (22.0 bits) S2: 163 (67.9 bits)