BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2116 (PAB2116) DE:Hypothetical protein
(417 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75148 hypothetical protein PAB2116 - Pyrococcus abyssi (st... 831 0.0
pir||E71188 hypothetical protein PH1782 - Pyrococcus horikoshii ... 688 0.0
gi|11499018 conserved hypothetical protein [Archaeoglobus fulgid... 243 3e-63
pir||B69064 conserved hypothetical protein MTH148 - Methanobacte... 231 1e-59
pir||A64444 conserved hypothetical protein MJ1154 - Methanococcu... 209 5e-53
emb|CAC11339.1| (AL445063) IFN-gamma-induced (putative GTP-bindi... 208 9e-53
gb|AAG19823.1| (AE005067) Vng1537c [Halobacterium sp. NRC-1] 204 1e-51
gb|AAG20566.1| (AE005127) Vng2502c [Halobacterium sp. NRC-1] 201 1e-50
pir||E70464 conserved hypothetical protein aq_1910 - Aquifex aeo... 184 2e-45
dbj|BAB07537.1| (AP001520) unknown conserved protein [Bacillus h... 178 1e-43
sp|P39651|YWFO_BACSU HYPOTHETICAL 51.0 KD PROTEIN IN PTA 3'REGIO... 174 2e-42
gb|AAK40452.1| Conserved hypothetical protein [Sulfolobus solfat... 169 5e-41
pir||S75393 hypothetical protein c04027 - Sulfolobus solfataricu... 169 5e-41
gb|AAK42021.1| Conserved hypothetical protein [Sulfolobus solfat... 164 2e-39
gb|AAK43226.1| Conserved hypothetical protein [Sulfolobus solfat... 160 2e-38
dbj|BAB10908.1| (AB010699) contains similarity to intracellular ... 153 4e-36
pir||F72238 conserved hypothetical protein - Thermotoga maritima... 150 3e-35
pir||B82871 conserved hypothetical UU598 [imported] - Ureaplasma... 139 7e-32
dbj|BAB10910.1| (AB010699) gene_id:MSN9.21~similar to unknown pr... 131 1e-29
sp|P47699|Y461_MYCGE HYPOTHETICAL PROTEIN MG461 >gi|1361603|pir|... 131 2e-29
gi|9256566 IFN-gamma induced [Mus musculus] >gi|2497366|sp|Q6071... 129 6e-29
gi|7661594 DKFZP564A032 protein [Homo sapiens] >gi|7513094|pir||... 129 6e-29
dbj|BAB18916.1| (AB013847) MOP-5 [Homo sapiens] 129 6e-29
sp|Q09374|YS48_CAEEL HYPOTHETICAL 66.5 KD PROTEIN ZK177.8 IN CHR... 126 5e-28
gb|AAG18802.1| (AE004984) Vng0189c [Halobacterium sp. NRC-1] 126 5e-28
sp|P75115|Y461_MYCPN HYPOTHETICAL PROTEIN MG461 HOMOLOG (K05_ORF... 119 5e-26
pir||B72602 hypothetical protein APE1281 - Aeropyrum pernix (str... 109 8e-23
gb|AAF49171.1| (AE003517) CG9670 gene product [Drosophila melano... 87 4e-16
dbj|BAB05530.1| (AP001513) unknown conserved protein [Bacillus h... 82 1e-14
pir||F69784 conserved hypothetical protein ydhJ - Bacillus subti... 70 4e-11
pir||T00032 oxetanocin A resistance protein oxrB - Bacillus mega... 70 5e-11
>pir||E75148 hypothetical protein PAB2116 - Pyrococcus abyssi (strain Orsay)
>gi|5457778|emb|CAB49268.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 417
Score = 831 bits (2123), Expect = 0.0
Identities = 417/417 (100%), Positives = 417/417 (100%)
Query: 1 MGIRVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEH 60
MGIRVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEH
Sbjct: 1 MGIRVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEH 60
Query: 61 SLGTWYLAKKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVS 120
SLGTWYLAKKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVS
Sbjct: 61 SLGTWYLAKKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVS 120
Query: 121 KAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYL 180
KAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYL
Sbjct: 121 KAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYL 180
Query: 181 TRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTV 240
TRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTV
Sbjct: 181 TRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTV 240
Query: 241 KIAEGMLIRALEFALDEGQLQDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVV 300
KIAEGMLIRALEFALDEGQLQDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVV
Sbjct: 241 KIAEGMLIRALEFALDEGQLQDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVV 300
Query: 301 IGPENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQ 360
IGPENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQ
Sbjct: 301 IGPENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQ 360
Query: 361 VEVNVMLSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKIKNVWREIVLE 417
VEVNVMLSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKIKNVWREIVLE
Sbjct: 361 VEVNVMLSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKIKNVWREIVLE 417
>pir||E71188 hypothetical protein PH1782 - Pyrococcus horikoshii
>gi|3258217|dbj|BAA30900.1| (AP000007) 399aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 399
Score = 688 bits (1757), Expect = 0.0
Identities = 329/399 (82%), Positives = 377/399 (94%)
Query: 19 MKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKKLSQELNLH 78
M++PEEI+KLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA+KLS EL L
Sbjct: 1 MRIPEEIIKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLARKLSLELQLP 60
Query: 79 YEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEMCEEGGEIP 138
E+SLLIQLAALLHDIGHGPFSHTFERIYR+RL F DHMEVS+ ++EGK+++CE+GGE+P
Sbjct: 61 REDSLLIQLAALLHDIGHGPFSHTFERIYRDRLDFHDHMEVSRRIVEGKIQICEDGGELP 120
Query: 139 DIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLER 198
DII+SLGYEPRE+G+LI+GKH+K+YLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLER
Sbjct: 121 DIISSLGYEPREVGELIVGKHKKRYLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLER 180
Query: 199 LLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRALEFALDEG 258
LL VM+ N ELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRA+EFALDEG
Sbjct: 181 LLTVMRVFNGELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRAVEFALDEG 240
Query: 259 QLQDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENLTSEEKKVLAHLY 318
+L+DFW+MTDDRL+IELEDLGD+ G+I+RRIR R+L+KAAV+IGPE+LT+EEKK L LY
Sbjct: 241 ELEDFWKMTDDRLVIELEDLGDFPGDIIRRIRRRKLFKAAVIIGPEDLTAEEKKSLTTLY 300
Query: 319 RSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQVEVNVMLSSGKLEPIAKV 378
RS KKR+KIE+ELAE VGA+EG+V++ELSIPELILSEPRLKQVEVNV+LS GK+EPI KV
Sbjct: 301 RSQKKRKKIESELAEIVGAREGEVMVELSIPELILSEPRLKQVEVNVLLSGGKVEPIGKV 360
Query: 379 TPLASAIKRRQTPRWILLIATLPEHVEKIKNVWREIVLE 417
TPLASAIKRRQTPRWILL+ATLPE++E +K VWRE++LE
Sbjct: 361 TPLASAIKRRQTPRWILLVATLPEYMEGVKRVWREVILE 399
>gi|11499018 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450833|pir||F69427 conserved hypothetical protein
AF1423 - Archaeoglobus fulgidus
>gi|2649147|gb|AAB89823.1| (AE001005) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 387
Score = 243 bits (613), Expect = 3e-63
Identities = 147/401 (36%), Positives = 232/401 (57%), Gaps = 42/401 (10%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K I D +HG +K+ + ++++VDTP+FQRLR + QLG ANLVYPGANHTRFEHSLG ++
Sbjct: 3 KSIQDTIHGVIKLEDWMVEIVDTPQFQRLRRINQLGFANLVYPGANHTRFEHSLGVMHVT 62
Query: 69 KKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKL 128
+ L + + ++ AALLHD+GH PFSH ER+ E+ +H +SK V
Sbjct: 63 RILQERMGF----DDVVVAAALLHDVGHAPFSHGSERLL-EKYASYNHETISKVV----- 112
Query: 129 EMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTG 188
GE+ D++ +LG+ EI ++ GK R +++G+ID D++DYL RD+HYTG
Sbjct: 113 -----RGELKDVLKNLGFRISEIEAIVTGKR-----RSVVNGEIDADRMDYLVRDSHYTG 162
Query: 189 VAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLI 248
VA+G+ D+ RL+ +K + +VI++ G++A E +L++R LMY VYFH +IA M
Sbjct: 163 VAYGVFDIYRLIDKIK-FDGAVVIEQGGVKAAESLLISRFLMYPTVYFHHVCRIARKMYE 221
Query: 249 RALEFALDEG-QLQDFWRMTD-DRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENL 306
RA+E ++ G + ++ M D D +++ L + E R+ +RRL+K A+ + +L
Sbjct: 222 RAMERIIEAGFEAENLLEMDDVDAMML----LKEKERETYDRLNNRRLFKRAIYVSRRSL 277
Query: 307 TSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQVEVNVM 366
E + R+ R+ E E+AE G E VI+++ E +++ V V
Sbjct: 278 DFRE------VMRT--SERRAEREVAEMAGVDERYVIVDIPPVE------EMRESGVMVD 323
Query: 367 LSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKI 407
SG L+P+ +V+PL A+K W L + T V+K+
Sbjct: 324 TESG-LKPLEEVSPLVKALKDAAVENWRLGVYTDRRFVDKV 363
>pir||B69064 conserved hypothetical protein MTH148 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621189|gb|AAB84654.1| (AE000803) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 406
Score = 231 bits (583), Expect = 1e-59
Identities = 139/381 (36%), Positives = 220/381 (57%), Gaps = 33/381 (8%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K I D+VHG++K+ E +++VDTP+FQRLR +KQLG +L+YPGANH+RFEHS+G YLA
Sbjct: 2 KFIRDSVHGNLKLSEFEVRIVDTPQFQRLRRIKQLGFTSLIYPGANHSRFEHSIGAMYLA 61
Query: 69 KKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKL 128
+L++ L L +E+ +++L ALLHD+GHGPFSH E + H +++ ++ +
Sbjct: 62 SRLAEHLGLGHEKKRVLRLCALLHDVGHGPFSHVSEGVLE-----MSHESLTRELIRKSI 116
Query: 129 EMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTG 188
+ DII S ++ R++ ++ G + L I G++DVD++DYL RD+HYTG
Sbjct: 117 --------LGDII-SEEFDLRQVMRILRG---EGVLGQAISGELDVDRMDYLLRDSHYTG 164
Query: 189 VAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLI 248
VA+GIID+ERL+ MK N+LV+D KG++A E L+AR MY VY H T +I M
Sbjct: 165 VAYGIIDVERLIYNMKM-ENDLVLDRKGVQAAESALLARYFMYPSVYQHHTTRIVNSMFR 223
Query: 249 RALEFALDEGQL--QDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENL 306
R L + G L +R D LI+ + AG+++RR+ +R L K + L
Sbjct: 224 RCLRSLISGGVLDASRIYRYDDMDLIVMCRNQEGLAGDMMRRLDNRDLLKTVDSVKLNEL 283
Query: 307 TSEEKKVLAHLYR-SYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQVEVNV 365
++ ++R + + ++ E E+AE++G V++ L PE + QV V
Sbjct: 284 EDPDR-----VFRITEAEIQRAEEEIAEDMGLDPDYVVVNL--PEYPAFDEMRTQVSV-- 334
Query: 366 MLSSGKLEPIAKVTPLASAIK 386
+ ++ ++ L A+K
Sbjct: 335 ---GDSIVNLSHISSLVGALK 352
>pir||A64444 conserved hypothetical protein MJ1154 - Methanococcus jannaschii
>gi|1500008|gb|AAB99151.1| (U67557) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 451
Score = 209 bits (526), Expect = 5e-53
Identities = 139/408 (34%), Positives = 223/408 (54%), Gaps = 51/408 (12%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K+I D++H + + E+ L+++D+ EFQRLR +KQ GL LVYP ANHTRFEHSLGT ++A
Sbjct: 2 KVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFIA 61
Query: 69 KKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKL 128
K+++++N E L +++ALLHDIGH PFSHT L
Sbjct: 62 SKIAEKINADVE---LTRVSALLHDIGHPPFSHT-------------------------L 93
Query: 129 EMCEEGGEI--PDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHY 186
E+C E+ I + + ++I + K II GD+D D++DYL RD+++
Sbjct: 94 EICGYSHEVFGRKKIKHMNLDNFSKSEIIKTLNRKNLEGKIISGDVDADRMDYLLRDSYH 153
Query: 187 TGVAHGIIDLERLLMVMKTHNN----ELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKI 242
TG A+G+IDL R+L + T + ++ I +KGI+A+E +LVAR MYS VY H TV+I
Sbjct: 154 TGTAYGMIDLPRILRSITTFESFGKVKIGILKKGIQAIESLLVARHQMYSAVYMHPTVRI 213
Query: 243 AEGMLIRALEFALDEGQL--QDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVV 300
A+ M+ RA+ + E L +D M D L+ L +Y ++ RI R LYK +
Sbjct: 214 ADTMIKRAVIKEIQEKNLDIKDLANMDDIALVSFLRISENY---LMERIDRRNLYKNLIT 270
Query: 301 IGPENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQ 360
+L EK + +L K+ +E+ EE G D+ I+ I P++++
Sbjct: 271 YSYFDLNPIEKWIFVNL--DEKQILSLESRFYEEFG---WDIFID------IYPIPKMEE 319
Query: 361 VEVNVMLSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKIK 408
V ++ G ++ + +V+PLA ++K + W + I E +++++
Sbjct: 320 HNVYIISDEG-VKRLDEVSPLAQSLKPSEMRLWNISIYAPKEKIKELR 366
>emb|CAC11339.1| (AL445063) IFN-gamma-induced (putative GTP-binding protein) protein
Mg11 related protein [Thermoplasma acidophilum]
Length = 426
Score = 208 bits (524), Expect = 9e-53
Identities = 139/388 (35%), Positives = 212/388 (53%), Gaps = 49/388 (12%)
Query: 7 DGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWY 66
+ KII D VHG ++ + IL+++DTPEFQRLR +K LGL LV+P ANH+RFEHS+GT++
Sbjct: 61 NSKIIQDPVHGPIRASDAILEMIDTPEFQRLRYIKNLGLCYLVFPSANHSRFEHSIGTFH 120
Query: 67 LAKKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEG 126
LA L + EE+ +AALLHD+GH PFSHT E YR+ + DH+E ++ G
Sbjct: 121 LAGMYLDHLGIKSEET---AMAALLHDVGHFPFSHTIEDFYRKN-RGVDHLEEGIKIIRG 176
Query: 127 KLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHY 186
+ E IP I+ + +++ ++ G+ + L I+ G ID D+LDYL RD+ Y
Sbjct: 177 ERE-----SNIPSILEKYSIDVKKVVSILEGR--ENVLSEIVSGPIDADELDYLRRDSFY 229
Query: 187 TGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGM 246
GV+ G ++ R++ V ++ ++I+EKG+ +E +L++R LMY VYFH+T +IA M
Sbjct: 230 CGVSIGFVNPARVISVSGIYDGRMIIEEKGLSDIESLLISRFLMYQAVYFHKTCRIANRM 289
Query: 247 LIRALEFALDEGQLQDFWRMTDDRLIIELEDLGDYAGE-IVRRIRSRRLYKAAVVIGPEN 305
L RA + + D +R++D L + D E ++R I RRL K
Sbjct: 290 LERAAIMS----EAYDTYRLSDQEFTHLL--MSDPRSEDMMRNILDRRLMKV-------- 335
Query: 306 LTSEEKKVLAHLYRSYKKRRKIENELAEEV-GAKEGDVIIELSIPELILSEPRLKQVEVN 364
LY+ K + LA ++ A I+++ P + RLK +V
Sbjct: 336 -----------LYKV-----KYDESLAHDILNAVSEKFIVDIIPPLSFRGKDRLK-TQVG 378
Query: 365 VML----SSGKLEPIAKVTPLASAIKRR 388
V+L ++G+ E V L SAI RR
Sbjct: 379 VLLENRIATGE-ESSPLVNALNSAIDRR 405
>gb|AAG19823.1| (AE005067) Vng1537c [Halobacterium sp. NRC-1]
Length = 409
Score = 204 bits (514), Expect = 1e-51
Identities = 132/399 (33%), Positives = 207/399 (51%), Gaps = 28/399 (7%)
Query: 11 IHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKK 70
I D+VH ++V + L+DTP QRLR V QLG +LVYP ANHTRFEHSLG ++LA +
Sbjct: 5 IKDSVHDHIEVTGVVAALLDTPPLQRLRNVAQLGTVSLVYPSANHTRFEHSLGVYHLADR 64
Query: 71 LSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEM 130
L + + + ++ AA+LHDIGHGPFSH E + ER H +V V
Sbjct: 65 ALDHLGITGQRATRVRAAAILHDIGHGPFSHNVEDVI-ERHTGNRHDDVHDLV------- 116
Query: 131 CEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTGVA 190
G++ ++ +P EI L+ G E L ++ G++DVD++DYL RDAH+TGV
Sbjct: 117 --ASGQVASVLADHDIQPAEIAALVAGDGEP--LAQLVAGELDVDRMDYLVRDAHHTGVP 172
Query: 191 HGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRA 250
+G ID RL+ + + +LV+ +++ E +L+AR+LM VY H +I++ ML RA
Sbjct: 173 YGTIDHGRLIRGLTFIDGDLVLGAGNVQSAESLLLARALMNPTVYSHHVARISKSMLRRA 232
Query: 251 LE--FALDEGQLQDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENLTS 308
E A + RM D L+ L D + R+ R LYK AV ++
Sbjct: 233 AETLLATTDVTAPALRRMDDHDLVAALR-AHDATSRVAARLFERDLYKRAVWAELGDVDD 291
Query: 309 EEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQVEVNVMLS 368
+ + + R E +A + G E DVI++ SEP + + V++
Sbjct: 292 D------LVGADHDTVRGFERAIAADAGVPERDVIVDAP------SEPSMPESSTGVLV- 338
Query: 369 SGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKI 407
+G++ + + + L +A++ Q +W L + T H + +
Sbjct: 339 NGEVRRLHEQSTLVTALQTAQREQWRLGVYTPRAHTDVV 377
>gb|AAG20566.1| (AE005127) Vng2502c [Halobacterium sp. NRC-1]
Length = 393
Score = 201 bits (506), Expect = 1e-50
Identities = 136/401 (33%), Positives = 205/401 (50%), Gaps = 29/401 (7%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
+ I D+VH ++ L+DT QRLR +KQL LVYP ANHTRFEHSLG ++LA
Sbjct: 2 RAIKDSVHDYIEADGVAAALLDTEPVQRLRHIKQLSTIRLVYPSANHTRFEHSLGVYHLA 61
Query: 69 KKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKL 128
+ L++ + ++ AALLHDIGHGP+ H E I + RL + H +V+ V
Sbjct: 62 DRALAHLDISGTRADTVRAAALLHDIGHGPYGHQTEGIIQRRLD-RHHDDVAHLV----- 115
Query: 129 EMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTG 188
GE ++ + G +P + L+ G H K L ++ G++DVD++DYL RDAH+TG
Sbjct: 116 ----SNGEPGAVLAAHGLDPDRVAALVAG-HGK--LGQLVAGELDVDRMDYLVRDAHHTG 168
Query: 189 VAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLI 248
V +G ID RLL + + +LV+ E + E +LV R+LM + VY H +IA ML
Sbjct: 169 VPYGTIDHGRLLRALTFRDGDLVLAEGNVATAESVLVGRALMNATVYRHHVSRIAGAMLD 228
Query: 249 RALEFALDEGQL--QDFWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENL 306
RA LD L + F R TD L+ L D + RRIR+R LYK AV + +
Sbjct: 229 RASARLLDTTDLDAETFARFTDADLLAVLRDC-PATQDAARRIRNRDLYKRAVWTERDAV 287
Query: 307 TSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSIPELILSEPRLKQVEVNVM 366
+ Y+ R +E+++A+ G V+I+ P + + V V
Sbjct: 288 PDDVATA------DYRTVRDLESQVADAAGVPATAVVIDTP------GAPSMPESSVRVT 335
Query: 367 LSSGKLEPIAKVTPLASAIKRRQTPRWILLIATLPEHVEKI 407
+ +G + + +PL + Q +W + T +HV +
Sbjct: 336 V-NGDTRRLDEQSPLVDGMLASQRAQWRFGVYTPDDHVPAV 375
>pir||E70464 conserved hypothetical protein aq_1910 - Aquifex aeolicus
>gi|2984174|gb|AAC07707.1| (AE000762) hypothetical
protein [Aquifex aeolicus]
Length = 371
Score = 184 bits (462), Expect = 2e-45
Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 27/334 (8%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K D ++G ++V E L+L+D+ FQRLR VKQLGLA LV+P A HTRFEHSLG +++
Sbjct: 3 KEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHIT 62
Query: 69 KKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIY-RERLKFQDHMEVSKAVLEGK 127
+++ + L + +E L++LA LLHD+GH PFSHT E + RER H + ++ V++
Sbjct: 63 ERICESLKVKEKE--LVKLAGLLHDLGHPPFSHTTEVLLPRER----SHEDFTERVIKET 116
Query: 128 LEMCEEGGEIPDIINSLGYEPREIGDLI---IGK---HEKKYLRMIIHGDIDVDQLDYLT 181
EI +I+ Y +I L+ +GK E+K L II G+ D++DYL
Sbjct: 117 --------EIYEILKQ-DYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLR 167
Query: 182 RDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTVK 241
RDA++ GV++G D +RL+ ++ + N++V+DE G+ A+E L++R MY +VYFH+ V+
Sbjct: 168 RDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVR 227
Query: 242 IAEGMLIRALEFALDEGQLQD---FWRMTDDRLIIELEDLGDYAGEIVRRIRSRRLYKAA 298
I L+ L+ + + D F R+ D +I EL + E RI R+ +K
Sbjct: 228 ILSIHLVEFLKKLISQEDFTDINNFLRLNDAFVISELFKRKAFR-EDFERIFQRKHFKTL 286
Query: 299 VVIGPENLTSEEKKVLAHLYRSYKKR-RKIENEL 331
+ SE K+ L + K R ++E E+
Sbjct: 287 LSTENYEKFSETKERLLEKFPQEKVRFDEVEKEV 320
>dbj|BAB07537.1| (AP001520) unknown conserved protein [Bacillus halodurans]
Length = 432
Score = 178 bits (447), Expect = 1e-43
Identities = 99/258 (38%), Positives = 156/258 (60%), Gaps = 18/258 (6%)
Query: 5 VSDGKIIHDAVHGSMKVPEEIL-KLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLG 63
+ + K+ D VH + V +E++ L+ T EFQRLR V+QLG L + GA HTRF HSLG
Sbjct: 9 LDEEKVFKDPVHRYIHVRDELIWALIGTKEFQRLRRVRQLGTTFLTFHGAEHTRFNHSLG 68
Query: 64 TWYLAKKLSQELN----LHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEV 119
+ + +++ + + EE LL AALLHDIGHGPFSH+FE+++ DH E
Sbjct: 69 VYEITRRIIEVFQGRPYWNEEERLLTLCAALLHDIGHGPFSHSFEKVFDT-----DHEEW 123
Query: 120 SKAVLEGKLEMCEEGGEIPDIINSLGYE-PREIGDLIIGKHEKKYLRMIIHGDIDVDQLD 178
++ ++ G E I +++ +G + P+++ D+I + K + II ID D++D
Sbjct: 124 TRRMIVGDTE-------IHNVLLKMGDDFPQKVADVIEKTYPNKLVTSIISSQIDADRMD 176
Query: 179 YLTRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHR 238
YL RDA+YTGV++G D+ER+L VM+ +++VI + G+ AVE +++R MY +VYFH
Sbjct: 177 YLQRDAYYTGVSYGHFDMERILRVMRPMEDQVVIKQSGMHAVEDYIMSRYQMYWQVYFHP 236
Query: 239 TVKIAEGMLIRALEFALD 256
+ AE +L + + D
Sbjct: 237 VTRSAEVILSKVFKRVKD 254
>sp|P39651|YWFO_BACSU HYPOTHETICAL 51.0 KD PROTEIN IN PTA 3'REGION
>gi|7450837|pir||G70056 ywfO protein - Bacillus subtilis
>gi|1561567|emb|CAB02494.1| (Z80355) Unknown [Bacillus
subtilis] >gi|2636296|emb|CAB15787.1| (Z99123) alternate
gene name: ipa-93d~similar to hypothetical proteins
[Bacillus subtilis]
Length = 433
Score = 174 bits (437), Expect = 2e-42
Identities = 97/264 (36%), Positives = 160/264 (59%), Gaps = 20/264 (7%)
Query: 4 RVSDGKIIHDAVHGSMKVPEEIL-KLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSL 62
++S+ K+ D VH + V ++++ L+ T EFQRLR +KQLG L + GA H+RF HSL
Sbjct: 7 KLSEEKVFKDPVHRYVHVRDKLIWDLIGTREFQRLRRIKQLGTTYLTFHGAEHSRFNHSL 66
Query: 63 GTWYLAKKLSQEL-----NLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHM 117
G + + +++ ++ E L AALLHD+GHGPFSH+FE+++ DH
Sbjct: 67 GVYEIVRRMVDDVFKGRPEWDDSERELCLAAALLHDLGHGPFSHSFEKVFH-----LDHE 121
Query: 118 EVSKAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQL 177
+ ++ ++ G E+ + ++ S G+ P+++ ++I ++ K + +I ID D++
Sbjct: 122 DFTRGIILGDTEVNQVLRKV-----SPGF-PQDVAEVIAKTYKNKQVVSLISSQIDADRM 175
Query: 178 DYLTRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFH 237
DYL RDA+YTGV++G D+ER+L VM+ +++VI E G+ AVE +++R MY +VYFH
Sbjct: 176 DYLQRDAYYTGVSYGHFDMERILRVMRPREDQIVIKESGMHAVEDYIMSRYQMYWQVYFH 235
Query: 238 RTVKIAEGMLIRALEFAL---DEG 258
+ AE +L + L A DEG
Sbjct: 236 PVTRSAEVILTKILHRAKQLHDEG 259
>gb|AAK40452.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 399
Score = 169 bits (424), Expect = 5e-41
Identities = 98/247 (39%), Positives = 146/247 (58%), Gaps = 23/247 (9%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K ++D +H +++ + K++D PEFQRLR +KQ LA LVYPGA HTRF HSLGT+YL
Sbjct: 2 KKVYDEIHAYIELDDREAKIIDMPEFQRLRRIKQTSLAYLVYPGATHTRFSHSLGTFYLT 61
Query: 69 KKLSQELN----LHYEESLLIQLAALLHDIGHGPFSHTFERIYRER-LKFQD--HMEVSK 121
L ++ + EES ++L+ALLHDIG PFSH+ E +Y E+ L +D +M +SK
Sbjct: 62 TILGEKFRQLGIITDEESTYLKLSALLHDIGQFPFSHSLEPLYLEKGLSNKDLRYMIISK 121
Query: 122 AVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLT 181
+ P+ E + +I + + I++ D+DVD++DYL
Sbjct: 122 S---------------PNFREFFDNESIDYSKIIEILNGNSMMSSIVNSDVDVDRMDYLV 166
Query: 182 RDAHYTGVAHGIIDLERLL-MVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTV 240
RD+ +TGV G IDL RLL + +NNE+V+ +KGI ++E ++R MY VY+H+T+
Sbjct: 167 RDSRHTGVQLGNIDLYRLLDTIFYGNNNEIVVQDKGIYSLENFFISRLHMYQAVYYHKTI 226
Query: 241 KIAEGML 247
E ML
Sbjct: 227 IGYELML 233
>pir||S75393 hypothetical protein c04027 - Sulfolobus solfataricus
>gi|1707799|emb|CAA69556.1| (Y08257) orf c04027
[Sulfolobus solfataricus]
Length = 399
Score = 169 bits (424), Expect = 5e-41
Identities = 98/247 (39%), Positives = 146/247 (58%), Gaps = 23/247 (9%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K ++D +H +++ + K++D PEFQRLR +KQ LA LVYPGA HTRF HSLGT+YL
Sbjct: 2 KKVYDEIHAYIELDDREAKIIDMPEFQRLRRIKQTSLAYLVYPGATHTRFSHSLGTFYLT 61
Query: 69 KKLSQELN----LHYEESLLIQLAALLHDIGHGPFSHTFERIYRER-LKFQD--HMEVSK 121
L ++ + EES ++L+ALLHDIG PFSH+ E +Y E+ L +D +M +SK
Sbjct: 62 TILGEKFRQLGIITDEESTYLKLSALLHDIGQFPFSHSLEPLYLEKGLSNKDLRYMIISK 121
Query: 122 AVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLT 181
+ P+ E + +I + + I++ D+DVD++DYL
Sbjct: 122 S---------------PNFREFFDNESIDYSKIIEILNGNSMMSSIVNSDVDVDRMDYLV 166
Query: 182 RDAHYTGVAHGIIDLERLL-MVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRTV 240
RD+ +TGV G IDL RLL + +NNE+V+ +KGI ++E ++R MY VY+H+T+
Sbjct: 167 RDSRHTGVQLGNIDLYRLLDTIFYGNNNEIVVQDKGIYSLENFFISRLHMYQAVYYHKTI 226
Query: 241 KIAEGML 247
E ML
Sbjct: 227 IGYELML 233
>gb|AAK42021.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 420
Score = 164 bits (410), Expect = 2e-39
Identities = 108/325 (33%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K I D ++G++KV KL+D P FQRL+ + Q G+A +++P HTRFEHSLGT+Y+A
Sbjct: 3 KYIKDPIYGNIKVES---KLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIA 59
Query: 69 KKLSQEL--NLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAV--- 123
K+ + N+ + +I+ AL HDIGH PFSHTFE + LK+ + + + +
Sbjct: 60 SKMIDRIEGNIDSDFKEIIKKLALYHDIGHFPFSHTFE-FALDVLKYLNDDKYKEIIGLT 118
Query: 124 -LEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEK--------KYLRMIIHGDIDV 174
+G+L E I + + LG +E+ DL+ + K ++I++ D+D
Sbjct: 119 EYKGQLHKFHEMMGIKILKDGLG--EKEVADLMENVYTSSNPLDDKIKIAKLIVNSDLDA 176
Query: 175 DQLDYLTRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRV 234
D+LDYL RD++Y+G GIID ER+++ M + K I+ +E +AR MYS V
Sbjct: 177 DRLDYLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSV 236
Query: 235 YFHRTVKIAEGMLIRALEFALDEG------QLQDFWRMTDDRLIIEL------EDLGDYA 282
Y H ++I ++ + FA+ +G L++ TD+++ + L +L +
Sbjct: 237 YNHPVIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFY 296
Query: 283 GEIVRRIRSRRLYKAAVVIGPENLT 307
+V RR YK AV+ G E T
Sbjct: 297 FSLV----ERRKYKRAVLQGSEART 317
>gb|AAK43226.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 413
Score = 160 bits (401), Expect = 2e-38
Identities = 112/354 (31%), Positives = 185/354 (51%), Gaps = 47/354 (13%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
KII D +HG ++V + +L+++ T FQRLR + Q GLA LVYPG HTRFEHSLG +LA
Sbjct: 8 KIIRDPIHGYIEVEDFVLQIISTEIFQRLRHITQTGLAYLVYPGMRHTRFEHSLGVMHLA 67
Query: 69 KKLSQELNLHYEESL-----------LIQLAALLHDIGHGPFSHTFE-------RIYRER 110
K+L++ + ++ E+ L+ L+ LLHDIGH PFSHTFE +Y
Sbjct: 68 KELTRYIKINSEQYTDLDFINEEYLKLVGLSGLLHDIGHLPFSHTFENALSLAKEVYGID 127
Query: 111 LKF---QDHMEVSKAVLEGKL-EMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRM 166
+++ + H+ V++ L ++ + D++N + R I K E+ +
Sbjct: 128 VEYYGKKTHVIFGNRVIDYYLGNYLDKLSKNYDVVN---FVQRVISSTPRTK-EESLASL 183
Query: 167 IIHGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVA 226
II +D D+ DYL RD+++ GV +G D+ER+ + N +L + +K I VE L+A
Sbjct: 184 IISSPLDADRGDYLLRDSYFAGVGYGNFDIERIKRSLIYVNGKLAVLKKAIPVVEQFLLA 243
Query: 227 RSLMYSRVYFHRTVKIAEGMLIRALEFALDEGQL-----QDFWRMTDDRLIIELEDLG-D 280
R MY +YFH V + +L A+ + + + +++ ++ D ++ +L + G +
Sbjct: 244 RMYMYETIYFHSVVGLYNAVLSHAVVKLIQKNLIPNVAPENYLKLNDVVIMSKLNEAGRE 303
Query: 281 YAGEIVRRIRSRRLYKAAVVIGPENLTSEEKKVLAHLYRSYKKRRKIENELAEE 334
+ IV R +R YK K + + Y + +K+RK NE+ E
Sbjct: 304 FFDAIVYRKGFKR-YK--------------KDLTGNCYETLEKKRKEINEIMRE 342
>dbj|BAB10908.1| (AB010699) contains similarity to intracellular
protein~gene_id:MSN9.18 [Arabidopsis thaliana]
Length = 473
Score = 153 bits (382), Expect = 4e-36
Identities = 104/315 (33%), Positives = 166/315 (52%), Gaps = 30/315 (9%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K ++D VHG++ + LK +DT +FQRLR +KQLG+ N+VYPGA H+RFEHSLG ++LA
Sbjct: 28 KHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELKQLGVTNMVYPGAVHSRFEHSLGVYWLA 87
Query: 69 KKLSQ--------ELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQ---DHM 117
+ +Q EL + + ++LA LLHDIGHGPFSH FER + ++ H
Sbjct: 88 GETAQRLKNFQGMELGIDNYDLQTVRLAGLLHDIGHGPFSHMFEREFLPKVISDCQWSHE 147
Query: 118 EVSKAVLEGKLEM--CEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMII---HGDI 172
+S +++ ++ + ++ + + E L G EK++L I+ I
Sbjct: 148 LMSVNMIDHMVDTHHIDIDAQMLKRVKDMILASTEFSQL-KGNAEKRFLYDIVANGRNGI 206
Query: 173 DVDQLDYLTRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYS 232
DVD+ DYL RD+ G+ +RL M+ +NE+ K +V + R+ +Y
Sbjct: 207 DVDKFDYLVRDSRACGLGSN-FQFQRLTETMRVLDNEICFRAKEYLSVHKLFATRADLYR 265
Query: 233 RVYFHRTVKIAEGMLIRA-------LEFALDEGQLQDFWRMTDDRLIIELEDLGD----Y 281
VY H VK E M++ A LE + ++W++ DD ++ +E D
Sbjct: 266 TVYTHSKVKAIELMIVDAMVKANNHLEISSMINDPSEYWKL-DDTILKTIEIAPDPELAE 324
Query: 282 AGEIVRRIRSRRLYK 296
A E++ R+R R+LY+
Sbjct: 325 AKELILRVRRRQLYQ 339
>pir||F72238 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4982115|gb|AAD36614.1|AE001801_1 (AE001801)
conserved hypothetical protein [Thermotoga maritima]
Length = 470
Score = 150 bits (375), Expect = 3e-35
Identities = 116/326 (35%), Positives = 173/326 (52%), Gaps = 36/326 (11%)
Query: 9 KIIHDAVHGSMKV-PEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYL 67
K+ D VH + + P EIL DT QRLR + QL A +VYPGA HTRF HSLGT ++
Sbjct: 4 KVSRDPVHSEIYLYPLEILA-TDTKVVQRLRFLSQLAGATVVYPGATHTRFAHSLGTMHV 62
Query: 68 AKKLSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQD-HMEVSKAVLEG 126
A ++ L + +++LAALLHD+GHGPFSH F+ + +R ++D H E ++
Sbjct: 63 AGLYARNLFKESDRIRIVRLAALLHDVGHGPFSHQFDDVVFKRYGYEDGHDEFRNRLITE 122
Query: 127 KL--EMCE---------EGGEIPDIINSLGYEPREIGDLIIGKHEKKYLR---------M 166
KL EM + I DI S+G E I K + R
Sbjct: 123 KLPEEMMRVFNSYNERLKQAVIEDIRESVGEVSLEDAFQEIAKRVVEVYRGEETGSVDFN 182
Query: 167 IIHGDIDVDQLDYLTRDAHYTGVAH-GIIDLERLL---MVMKTHNNE-LVIDEKGIEAVE 221
II G + D+LD+L RD++Y+GV H ++++R+L +V + E L K ++ +
Sbjct: 183 IIQGPLGADRLDFLLRDSYYSGVGHFAPMNVDRVLRNSLVKEVDGKEILCYHVKVVDNIY 242
Query: 222 GMLVARSLMYSRVYFHRTVKIAEGM----LIRALEFALDEGQLQD---FWRMTDDRLIIE 274
+L +R +MY VYFH+T + A+ M L+RA E E +L+D F +TD ++ E
Sbjct: 243 SILFSRFMMYKNVYFHKTSRAADLMIQEILLRACEILDLEERLKDLDEFLELTDYSILRE 302
Query: 275 LEDLGD-YAGEIVRRIRSRRLYKAAV 299
LE GD ++V R ++R L+K V
Sbjct: 303 LELKGDSETKKLVERFKNRDLWKMVV 328
>pir||B82871 conserved hypothetical UU598 [imported] - Ureaplasma urealyticum
>gi|6899609|gb|AAF31012.1|AE002158_10 (AE002158)
conserved hypothetical [Ureaplasma urealyticum]
Length = 405
Score = 139 bits (346), Expect = 7e-32
Identities = 78/239 (32%), Positives = 127/239 (52%), Gaps = 21/239 (8%)
Query: 11 IHDAVHGSMKVPEEI---LKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYL 67
I D +HG + E+ +L+ T EF RL +KQLG + ++P A HTRF H +G + +
Sbjct: 7 IKDPIHGLITFDEQYEWAYELIKTKEFWRLNNIKQLGSSWSIFPSATHTRFTHCIGVFQV 66
Query: 68 AKKLSQELNLHYEES-------LLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVS 120
+KL L ++ ++ AALLHDIGHGPFSHTFE +H ++
Sbjct: 67 TRKLLDSLKFIKSDTHDLINNKKIVCAAALLHDIGHGPFSHTFEYATN-----YNHEKI- 120
Query: 121 KAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYL 180
G++ + EI I+ P ++ ++I K +K +++ +I ID D+LDYL
Sbjct: 121 -----GQMIITNPKSEINKILIKHNINPVDVANIIDHKSKKMWMQQVISSQIDADRLDYL 175
Query: 181 TRDAHYTGVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRVYFHRT 239
RD+H+TG +G ID + + N++L + A+E +L++R M+ VY ++T
Sbjct: 176 PRDSHFTGTKYGNIDYDNIFKKAIVFNDQLCFSKHSWNALENILISRWSMFENVYLNKT 234
>dbj|BAB10910.1| (AB010699) gene_id:MSN9.21~similar to unknown protein~sp|Q60710
[Arabidopsis thaliana]
Length = 407
Score = 131 bits (327), Expect = 1e-29
Identities = 101/313 (32%), Positives = 149/313 (47%), Gaps = 60/313 (19%)
Query: 9 KIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLA 68
K +HD VHG++ + LK +DT +FQRLR +KQLG+ N+VYPGA H+RFEHSLG ++LA
Sbjct: 21 KHVHDNVHGNIYLDPLCLKFIDTEQFQRLRELKQLGVTNMVYPGAVHSRFEHSLGVYWLA 80
Query: 69 KKLSQ--------ELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVS 120
+ Q EL + + ++LA LLHDIGHGPFSH FER E
Sbjct: 81 GETVQRLKTFQGMELGIDNHDLQTVRLAGLLHDIGHGPFSHMFER------------EFL 128
Query: 121 KAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYL 180
V+ G C+ E+ I + D I+ H H D+D L +
Sbjct: 129 PKVISG----CQWSHELMSI---------NMIDYIVDTH---------HIDVDAKMLKRV 166
Query: 181 TRDAH----YTGVAHGI--IDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRV 234
+A Y VA+G ID+++L M+ +NE+ K V + R+ + V
Sbjct: 167 KGNAEKRFLYDIVANGRNGIDVDKLTEPMRVIDNEICYPAKEYRTVHKLFATRADLCGTV 226
Query: 235 YFHRTVKIAEGMLIRA-------LEFALDEGQLQDFWRMTDDRLIIELEDLGD----YAG 283
Y H E M++ A LE + +W++ DD ++ +E D A
Sbjct: 227 YMHPKKMAIELMIVDAMVKANNVLEISSMINDPSQYWKL-DDTILKTIERSPDPELAEAK 285
Query: 284 EIVRRIRSRRLYK 296
E++ R+ R LY+
Sbjct: 286 ELILRLSRRHLYQ 298
>sp|P47699|Y461_MYCGE HYPOTHETICAL PROTEIN MG461 >gi|1361603|pir||I64250 hypothetical
protein homolog MG461 - Mycoplasma genitalium
>gi|3845056|gb|AAC72481.1| (U39728) conserved
hypothetical protein [Mycoplasma genitalium]
Length = 425
Score = 131 bits (326), Expect = 2e-29
Identities = 74/220 (33%), Positives = 120/220 (53%), Gaps = 15/220 (6%)
Query: 27 KLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKKL---SQELNLHYEESL 83
+LV+T FQRLR +KQLG+ YP HTR+ HSLG + L +++ S LN+ +
Sbjct: 25 ELVNTKAFQRLRNIKQLGINFHFYPSGVHTRYAHSLGVYELIRRILNSSAFLNIDQIKKQ 84
Query: 84 LIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEMCEEGGEIPDIINS 143
+ +A LLHD+GHGP SH FE + + F+ + + + V M I I+ +
Sbjct: 85 TVLVAGLLHDLGHGPHSHAFEIYFAKNPDFKKQLFIHEKV----TSMLVNSEPIVSILKA 140
Query: 144 LGYEPREIGDLIIGKHEKK----YLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLERL 199
+P IG LI + ++R +I D+D D++DYL RDA++TG +H ++D + +
Sbjct: 141 NKIDPNLIGALIDENQNIQPINWWMRQLISSDLDTDRMDYLLRDAYFTGTSHSLVDYQSI 200
Query: 200 LMVMKTHNNE----LVIDEKGIEAVEGMLVARSLMYSRVY 235
+ M+ +N+ +V EK + +E L+ R MY +Y
Sbjct: 201 INGMECVDNQGTYKIVFQEKCLPFIENFLITRHHMYQSIY 240
>gi|9256566 IFN-gamma induced [Mus musculus] >gi|2497366|sp|Q60710|MG11_MOUSE
INTERFERON-GAMMA INDUCIBLE PROTEIN MG11
>gi|2137851|pir||I49127 intracellular protein Mg11 -
mouse >gi|558903|gb|AAA66219.1| (U15635) unknown
intracellular protein [Mus musculus]
Length = 594
Score = 129 bits (321), Expect = 6e-29
Identities = 113/412 (27%), Positives = 185/412 (44%), Gaps = 79/412 (19%)
Query: 4 RVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLG 63
R+ K+ +D +HG ++ +++++DTP+FQRLR +KQLG V+PGA+H RFEHSLG
Sbjct: 112 RIDLMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLG 171
Query: 64 TWYLAKKL-------SQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDH 116
YLA L EL + + L +Q+A L HD+GHGPFSH F+ + R + +
Sbjct: 172 VGYLAGCLVRALAEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPRARPEKK 231
Query: 117 MEVSKAVLEGKLEMCE---EGGEIPDIINSLGYEPRE----IGDLIIG------------ 157
+ +G +EM E E+ ++ + G P E I + I+G
Sbjct: 232 WKHE----QGSIEMFEHLVNSNELKLVMKNYGLVPEEDITFIKEQIMGPPITPVKDSLWP 287
Query: 158 ----KHEKKYLRMII---HGDIDVDQLDYLTRDAHYTGVAHG-----------IIDLERL 199
K +L I+ IDVD+ DY RD H+ G+ + I ++E
Sbjct: 288 YKGRPATKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVEYK 347
Query: 200 LMVMKTHNNE---LVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRA------ 250
+ KT+ + + EK + + M R+ ++ R Y H+ + + M+ A
Sbjct: 348 VKEDKTYIRKVKHICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFLKADP 407
Query: 251 -------------LEFALDEGQLQDFWRMTDDRLIIELEDLGDYAGE---IVRRIRSRRL 294
+ A+D+ ++ F ++TD+ + L E I+R I R L
Sbjct: 408 YVEITGTAGKKFRISTAIDD--MEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNL 465
Query: 295 YKAAVVIGPENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIEL 346
YK +G E EK R ++ K + E A +V K D I+++
Sbjct: 466 YK---YLG-ETQPKREKIRKEEYERLPQEVAKAKPEKAPDVELKAEDFIVDV 513
>gi|7661594 DKFZP564A032 protein [Homo sapiens] >gi|7513094|pir||T08686
intracellular protein Mg11 homolog DKFZp564A032.1 -
human >gi|4886493|emb|CAB43368.1| (AL050267)
hypothetical protein [Homo sapiens]
>gi|6942315|gb|AAF32407.1|AF228421_1 (AF228421)
hypothetical protein SBBI88 [Homo sapiens]
Length = 626
Score = 129 bits (321), Expect = 6e-29
Identities = 111/405 (27%), Positives = 187/405 (45%), Gaps = 80/405 (19%)
Query: 3 IRVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSL 62
I V K+I+D +HG +++ +++++DTP+FQRLR +KQLG V+PGA+H RFEHSL
Sbjct: 110 IHVDTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSL 169
Query: 63 GTWYLAKKL-------SQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQD 115
G YLA L EL + + L +Q+A L HD+GHGPFSH F+ + +
Sbjct: 170 GVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLAR--- 226
Query: 116 HMEVSKAVLEGKLEMCE---EGGEIPDIINSLGYEPRE----IGDLIIGKHE-------- 160
EV +G + M E I ++ G P E I + I+G E
Sbjct: 227 -PEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLESPVEDSLW 285
Query: 161 --------KKYLRMII---HGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLMVMKT--HN 207
K +L I+ IDVD+ DY RD H+ G+ + D +R + + +
Sbjct: 286 PYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNN-FDYKRFIKFARVCEVD 344
Query: 208 NELVI--DEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRA--------------- 250
NEL I +K + + M R+ ++ R Y H+ I + M+ A
Sbjct: 345 NELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKAGDYIEITGAGG 404
Query: 251 ----LEFALDEGQLQDFWRMTDD---RLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGP 303
+ A+D+ ++ + ++TD+ ++ + A EI+++I R L+K +G
Sbjct: 405 KKYRISTAIDD--MEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFK---YVGE 459
Query: 304 ENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSI 348
T + K +R+ L +EV + + V++++ +
Sbjct: 460 TQPTGQ-----------IKIKREDYESLPKEVASAKPKVLLDVKL 493
>dbj|BAB18916.1| (AB013847) MOP-5 [Homo sapiens]
Length = 626
Score = 129 bits (321), Expect = 6e-29
Identities = 111/405 (27%), Positives = 187/405 (45%), Gaps = 80/405 (19%)
Query: 3 IRVSDGKIIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSL 62
I V K+I+D +HG +++ +++++DTP+FQRLR +KQLG V+PGA+H RFEHSL
Sbjct: 110 IHVDTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSL 169
Query: 63 GTWYLAKKL-------SQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQD 115
G YLA L EL + + L +Q+A L HD+GHGPFSH F+ + +
Sbjct: 170 GVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLAR--- 226
Query: 116 HMEVSKAVLEGKLEMCE---EGGEIPDIINSLGYEPRE----IGDLIIGKHE-------- 160
EV +G + M E I ++ G P E I + I+G E
Sbjct: 227 -PEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLESPVEDSLW 285
Query: 161 --------KKYLRMII---HGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLMVMKT--HN 207
K +L I+ IDVD+ DY RD H+ G+ + D +R + + +
Sbjct: 286 PYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNN-FDYKRFIKFARVCEVD 344
Query: 208 NELVI--DEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRA--------------- 250
NEL I +K + + M R+ ++ R Y H+ I + M+ A
Sbjct: 345 NELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGG 404
Query: 251 ----LEFALDEGQLQDFWRMTDD---RLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGP 303
+ A+D+ ++ + ++TD+ ++ + A EI+++I R L+K +G
Sbjct: 405 KKYRISTAIDD--MEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFK---YVGE 459
Query: 304 ENLTSEEKKVLAHLYRSYKKRRKIENELAEEVGAKEGDVIIELSI 348
T + K +R+ L +EV + + V++++ +
Sbjct: 460 TQPTGQ-----------IKIKREDYESLPKEVASAKPKVLLDVKL 493
>sp|Q09374|YS48_CAEEL HYPOTHETICAL 66.5 KD PROTEIN ZK177.8 IN CHROMOSOME II
>gi|7511011|pir||T27765 hypothetical protein ZK177.8 -
Caenorhabditis elegans >gi|9803042|gb|AAG00049.1|
(U21321) Hypothetical protein ZK177.8 [Caenorhabditis
elegans]
Length = 587
Score = 126 bits (313), Expect = 5e-28
Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 68/325 (20%)
Query: 10 IIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAK 69
II+D V+G++KVP I KL+DT EFQRLR +KQ GL LVYP H+RF HSLGT+ LA
Sbjct: 45 IINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAY 104
Query: 70 KLSQEL-----NLHYEESLLI--QLAALLHDIGHGPFSHTFERIYRER--LKFQDHMEVS 120
L +L +L+ ES LI +AALLHD+GHGPFSH F+ + +R +F+ H ++S
Sbjct: 105 ALVDKLRHSQPSLNITESDLICTSVAALLHDVGHGPFSHLFDGEFAKRNGSRFK-HEDMS 163
Query: 121 KAVLEGKLEMCEEGGEIPDIINSLGYEPRE----IGDLIIGK------------------ 158
+++ + E E I+ E + I +LI GK
Sbjct: 164 ILIIKKIMNKPEIKSEFACILGETDEEYAKSVTLITELISGKPFDFQDMDGFKDLPADVR 223
Query: 159 --------------HEKKYLRMII---HGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLM 201
EK +L ++ + DVD++DYL RD+ +GV GI E L
Sbjct: 224 EETVKNEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGV--GITFSESTLE 281
Query: 202 VMKTHNNELVIDEKGIEAVE------GMLVA----RSLMYSRVYFHRTVKIAEGMLIRAL 251
+ H ++ G++ + G L A R ++S+VY H+ V+ E +++ AL
Sbjct: 282 RLFNHVRVVIDPNSGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDAL 341
Query: 252 EFALD-------EGQLQDFWRMTDD 269
A D G+L +T+D
Sbjct: 342 INAGDFLKYKGSNGELYSLKNVTED 366
>gb|AAG18802.1| (AE004984) Vng0189c [Halobacterium sp. NRC-1]
Length = 479
Score = 126 bits (313), Expect = 5e-28
Identities = 117/386 (30%), Positives = 168/386 (43%), Gaps = 71/386 (18%)
Query: 11 IHDAVHGSMKVPEEILK-LVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAK 69
+ D VHG +++ ++ L+D FQRLR V+QL LVYPGANHTRFEHSLG ++LAK
Sbjct: 6 LKDPVHGYIELDAALVDGLIDRKPFQRLRHVRQLSATTLVYPGANHTRFEHSLGVYHLAK 65
Query: 70 KLSQELN----LHYEESL--------LIQLAALLHDIGHGPFSHTFERIYRERLKFQDHM 117
+ + L H + + ++ AALLHD+GH PFSH ER Y +R D +
Sbjct: 66 TVFENLRTQPYFHQDATTTELDAIQRTLECAALLHDVGHPPFSHLGER-YLDRSAILDRL 124
Query: 118 --------------------EVSKAVLEGKLEMCEEGGEIPDIINSLGYEPREIGDLII- 156
E S L G L +C E D I ++ +P + I+
Sbjct: 125 ADHGLHATFADAGVGNAPLREASPHELFGCLFVCR---EFADAITAMDVDPHAVCAHILG 181
Query: 157 --------GKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLMVMKTHNN 208
G+ + I+H IDVD+LDY+TRD TG D R++ H +
Sbjct: 182 YSLAYERGGRWQHGVAAQILHSPIDVDRLDYITRDNQMTGADVLSFDTARMVASYTAHPD 241
Query: 209 E-LVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRALEFALDEGQLQDFWRMT 267
E L + +K + + L R +Y V H A L+R L AL ++D +T
Sbjct: 242 EGLALSDKALSTIGNYLEGRIALYMWVTQHHKSVFAHA-LLRELLAAL--AAMRDTPPIT 298
Query: 268 DDRLIIELEDLGDYAGEIVRRIRSRRLYKAAVVIGPENLTSEEKKVLAHLYRSYKKRRKI 327
D ++ D G I+ R+R V +N S LA LY ++ R
Sbjct: 299 IDAVL----DRGIDDNTILERLR---------VAARDNPDS----TLATLYERFRSREFP 341
Query: 328 E----NELAEEVGAKEGDVIIELSIP 349
E + +A GD S P
Sbjct: 342 ETCWKHRVAYAARVDVGDTTASASAP 367
>sp|P75115|Y461_MYCPN HYPOTHETICAL PROTEIN MG461 HOMOLOG (K05_ORF425)
>gi|2146471|pir||S73491 MG461 homolog K05_orf425 -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673826|gb|AAB95813.1| (AE000017) similar to ATPases
[Mycoplasma pneumoniae]
Length = 425
Score = 119 bits (296), Expect = 5e-26
Identities = 68/220 (30%), Positives = 114/220 (50%), Gaps = 15/220 (6%)
Query: 27 KLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKKLSQE---LNLHYEESL 83
+LV+T F+RLR +KQLG+ YPG HTR+ HSLG + L +++ + +
Sbjct: 25 ELVETEAFRRLRNIKQLGINFHFYPGGVHTRYSHSLGVYELLRRILNTPAFAPIDENKKQ 84
Query: 84 LIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEMCEEGGEIPDIINS 143
+ +A LLHDIGH P SH FE + + F+ + + + V + I I+ +
Sbjct: 85 TVLVAGLLHDIGHAPHSHAFEIYFAKAPNFKKELFIHEEV----TTLFVNSEPIKSILKA 140
Query: 144 LGYEPREIGDLIIGKHEKK----YLRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLERL 199
+P+ + LI E K ++R +I D+D D++DYL RD+++TG +H +ID + +
Sbjct: 141 NQIDPKLVAALIDENKELKPSNYWMRQLISSDLDADRMDYLLRDSYFTGTSHSLIDYQTI 200
Query: 200 LMVMKTHN----NELVIDEKGIEAVEGMLVARSLMYSRVY 235
+ M E+ +K + +E L+ R MY +Y
Sbjct: 201 IKEMDCVKVKGIYEIFFKDKCLPLIENFLITRHHMYQSIY 240
>pir||B72602 hypothetical protein APE1281 - Aeropyrum pernix (strain K1)
>gi|5104958|dbj|BAA80272.1| (AP000061) 643aa long
hypothetical protein [Aeropyrum pernix]
Length = 643
Score = 109 bits (269), Expect = 8e-23
Identities = 100/342 (29%), Positives = 140/342 (40%), Gaps = 99/342 (28%)
Query: 9 KIIHDAVHGSMKVPEEILK-LVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYL 67
KI+ D VH +++P +++ +VD P FQRLR V+QL LA+ VYPGA HTRFEHSLG Y
Sbjct: 12 KIVKDVVHQFIELPSDLVATIVDRPLFQRLRRVRQLSLADYVYPGAVHTRFEHSLGVAYT 71
Query: 68 AKKLSQELNLHYEESLL------------------------------------------I 85
++ + + EE +L
Sbjct: 72 MRRALHHIVKNVEEIVLPSVAEYIEDEYPLKGGLQKRLQGIATHLIRDVTNALRNMEGEA 131
Query: 86 QLAALLHDIGHGPFSHTFE------------RIYRERLKFQDHMEVSKAVLEGKLEMCEE 133
+AALLHD GH SH E R RE ++H +++ ++ + E
Sbjct: 132 VVAALLHDSGHIMASHIAEQALHDPLIMVAPRAVRELPLLEEHEDLTIKIVSKLADEDVE 191
Query: 134 ---GGEIPDI-----INSLGYE----------------PREIGDLIIGKHEKKY------ 163
GG D+ I L Y P G L +Y
Sbjct: 192 ILYGGRRVDLRRVVEILRLAYSRGEWEKRCIRDAEYQAPTAPGGLGESARASRYATVAAM 251
Query: 164 --LRMIIHGDIDVDQLDYLTRDAHYTGVAHGIIDLERLLMVM-------KTHNN-----E 209
+ ++ IDVD+ DY+ RD+ +TG GI D+ R V+ TH+
Sbjct: 252 CIIAQLLSSGIDVDRADYIIRDSIHTGSLSGIYDINRYYAVLTLVPEARHTHSTLKASLR 311
Query: 210 LVIDEKGIEAVEGMLVARSLMYSRVYFHRTVKIAEGMLIRAL 251
L I EKG+ +E ML+AR MYS VY H I ML R +
Sbjct: 312 LGILEKGVTVIENMLLARIYMYSDVYLHDVSMIYSAMLSRVI 353
>gb|AAF49171.1| (AE003517) CG9670 gene product [Drosophila melanogaster]
Length = 420
Score = 87.0 bits (212), Expect = 4e-16
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 35/200 (17%)
Query: 10 IIHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLAN-LVYPGANHTRFEHSLGTWYLA 68
+I D VHG +++ I ++V+ P FQRL+ V QLGL + A+H R++H LG + A
Sbjct: 54 LIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLGLLPWAIDKKADHKRYDHCLGAYKSA 113
Query: 69 KKLSQ--ELNLHYEESL------LIQLAALLHDIGHGPFSHTFERIYRERLKFQDHM--- 117
+ + E N HYE L +++AALLHDIGHGP SH +E + +++
Sbjct: 114 QDHLRAIERNSHYEPKLPDWCRQAVEIAALLHDIGHGPMSHAWELVTHHEFDHEENAMAC 173
Query: 118 --EVSKAVLEGKL-EMCEEGGEIPDIINSLGYEPREIGDLIIGKHEK--------KYLRM 166
++ K L +L + ++GG G + I LI+G E Y+
Sbjct: 174 VDKIFKDALNQELVSLRDDGG---------GRGVQLIKALILGSSENLPFPMLGHTYIFD 224
Query: 167 IIHG---DIDVDQLDYLTRD 183
I+H +DVD+ DYL RD
Sbjct: 225 IVHNRRCGLDVDKWDYLRRD 244
>dbj|BAB05530.1| (AP001513) unknown conserved protein [Bacillus halodurans]
Length = 325
Score = 81.9 bits (199), Expect = 1e-14
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 53/283 (18%)
Query: 13 DAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKKLS 72
D+++G+ V I +L+D+ QRL+G+ Q G +V P N TRFEHS+G L +KL
Sbjct: 5 DSIYGTYTVEPVISELIDSAPVQRLKGIHQGGACYIVKPSWNVTRFEHSIGVMLLIRKLG 64
Query: 73 QELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEMCE 132
L EE Q+A LLHD+ H FSH + + E + H ++ + V+
Sbjct: 65 GSL----EE----QIAGLLHDVSHTAFSHVIDYVLAEE-EEDYHEQIYEQVI-------- 107
Query: 133 EGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTGVAHG 192
EIP I++ G++ + I+ H L + D++DY RD + G
Sbjct: 108 RASEIPHILDKYGFDL----ERIVLNHSCWTLLEQPSPSLCADRIDYTLRDLYTYG---- 159
Query: 193 IIDLERLLMVMKTHNNELVIDE--KGIEAVEGML----VARSLMYSRVYFHRTVKI---- 242
H N+ +D+ + V+G++ VA + + R Y+ +
Sbjct: 160 -------------HINKQEVDDFIANLIVVDGIISTSSVAGAEWFVRAYYKEVIDFFLDP 206
Query: 243 ----AEGMLIRALEFALDEGQL-QDFWRMTDDRLIIELEDLGD 280
+L L+ A++ L D + TD+ L+ +L+ L D
Sbjct: 207 LNVYGSSVLTSVLKSAVERKALGLDDFLKTDEELMEQLQRLND 249
>pir||F69784 conserved hypothetical protein ydhJ - Bacillus subtilis
>gi|1945094|dbj|BAA19702.1| (D88802) ydhJ [Bacillus
subtilis] >gi|2632891|emb|CAB12397.1| (Z99107) similar
to hypothetical proteins [Bacillus subtilis]
Length = 325
Score = 70.2 bits (169), Expect = 4e-11
Identities = 70/248 (28%), Positives = 112/248 (44%), Gaps = 30/248 (12%)
Query: 11 IHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKK 70
I D ++G + + +L+ + QRL+G+ Q G + LV N TR+EHS+G L KK
Sbjct: 3 ISDIIYGQHHIDGVLEELIKSAPVQRLKGIYQGGASFLVNRKWNVTRYEHSIGVMLLIKK 62
Query: 71 LSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEM 130
L + EE Q+A LLHD+ H FSH + ++ + + H + + V+
Sbjct: 63 LGGTI----EE----QIAGLLHDVSHTAFSHVVDVVFENQAE-DYHENIFQQVI------ 107
Query: 131 CEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDVDQLDYLTRDAHYTGVA 190
EIPDI+ GY E ++ + L ++ D+ DY RD + G
Sbjct: 108 --VHSEIPDILQKHGYHTEE----LLSDDSRWTLLEQPAPELCADRTDYTLRDMYRYGHI 161
Query: 191 HGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRV--YFHRTVKI-AEGML 247
+ + + + L + N + D IEA E + S+ Y V +F V + L
Sbjct: 162 N-LHEAQTFLDHLIVRNGRMFPD--SIEAAEWFV---SVYYKEVIDFFLNPVNVYGYEYL 215
Query: 248 IRALEFAL 255
RAL+ AL
Sbjct: 216 ARALKAAL 223
>pir||T00032 oxetanocin A resistance protein oxrB - Bacillus megaterium plasmid
pOXTB2 >gi|2281788|dbj|BAA21632.1| (AB005787) protein
responsible for oxetanocin A resistance [Bacillus
megaterium]
Length = 325
Score = 69.9 bits (168), Expect = 5e-11
Identities = 73/272 (26%), Positives = 117/272 (42%), Gaps = 41/272 (15%)
Query: 11 IHDAVHGSMKVPEEILKLVDTPEFQRLRGVKQLGLANLVYPGANHTRFEHSLGTWYLAKK 70
I D ++G + + +L+ T QRL+ + Q G L+ + TR++HS+G L +
Sbjct: 3 IFDPIYGEYDLEPVLTELIHTKPVQRLKKIHQAGGCYLINGKWDVTRYDHSVGVMLLIRY 62
Query: 71 LSQELNLHYEESLLIQLAALLHDIGHGPFSHTFERIYRERLKFQDHMEVSKAVLEGKLEM 130
L+ S+L Q+A LLHDI H FSH + + + V K V
Sbjct: 63 LN--------GSILEQIAGLLHDISHTAFSHVVDYVLDNDEEDYHEKIVDKIVF------ 108
Query: 131 CEEGGEIPDIINSLGYEPREIGDLIIGKHEKKYLRMIIHGDIDV---DQLDYLTRDAHYT 187
EIP I+ D+ I I+ D+ + D++DY RD +Y
Sbjct: 109 ---SSEIPSILKKY--------DIDINLILDHSCWGILEQDLPLPCADRIDYTLRDMYYY 157
Query: 188 GVAHGIIDLERLLMVMKTHNNELVIDEKGIEAVEGMLVARSLMYSRV---YFHRTVKIAE 244
+ D+++ L + NN++VI K IE+ E L Y V + H +
Sbjct: 158 -QGENLEDIQKFLNNLHVINNKIVI--KNIESAEWF---TKLYYKEVIDFFLHPLNVFSN 211
Query: 245 GMLIRALEFALDEG--QLQDFWRMTDDRLIIE 274
L + L AL++ L DF +TDD ++E
Sbjct: 212 RHLTKILTLALEKEIIHLDDF--LTDDFTVME 241
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148098597
Number of Sequences: 2977
Number of extensions: 6110123
Number of successful extensions: 23864
Number of sequences better than 1.0e-10: 31
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 23772
Number of HSP's gapped (non-prelim): 34
length of query: 417
length of database: 189,106,746
effective HSP length: 57
effective length of query: 360
effective length of database: 154,992,987
effective search space: 55797475320
effective search space used: 55797475320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)