BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2118 (PAB2118) DE:Hypothetical protein
(282 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75148 hypothetical protein PAB2118 - Pyrococcus abyssi (st... 556 e-158
pir||C71188 conserved hypothetical protein MJ1225 homolog - Pyro... 493 e-139
pir||H69232 MJ1225-related protein MTH992 - Methanobacterium the... 173 2e-42
gi|11497682 conserved hypothetical protein [Archaeoglobus fulgid... 164 1e-39
emb|CAC11353.1| (AL445063) conserved hypothetical protein [Therm... 140 2e-32
gb|AAG20453.1| (AE005117) Vng2351c [Halobacterium sp. NRC-1] 136 4e-31
sp|Q58799|YE04_METJA HYPOTHETICAL PROTEIN MJ1404 >gi|2128840|pir... 84 1e-15
sp|Q58622|YC25_METJA HYPOTHETICAL PROTEIN MJ1225 >gi|2128050|pir... 80 2e-14
pir||E69030 conserved hypothetical protein MJ1225 homolog - Meth... 76 4e-13
sp|Q58821|YE26_METJA HYPOTHETICAL PROTEIN MJ1426 >gi|2128058|pir... 76 6e-13
pir||F72780 hypothetical protein APE0231 - Aeropyrum pernix (str... 75 1e-12
pir||G75056 dehydrogenase PAB0961 - Pyrococcus abyssi (strain Or... 73 4e-12
pir||E75015 IMP dehydrogenase (EC 1.1.1.205) PAB1250 - Pyrococcu... 73 4e-12
pir||D71175 hypothetical protein PH0600 - Pyrococcus horikoshii ... 69 6e-11
>pir||C75148 hypothetical protein PAB2118 - Pyrococcus abyssi (strain Orsay)
>gi|5457776|emb|CAB49266.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 282
Score = 556 bits (1418), Expect = e-158
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE 60
MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE
Sbjct: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE 60
Query: 61 QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT 120
QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT
Sbjct: 61 QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT 120
Query: 121 EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180
EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR
Sbjct: 121 EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180
Query: 181 DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHMTV 240
DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHMTV
Sbjct: 181 DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHMTV 240
Query: 241 YEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAKC 282
YEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAKC
Sbjct: 241 YEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAKC 282
>pir||C71188 conserved hypothetical protein MJ1225 homolog - Pyrococcus
horikoshii >gi|3258215|dbj|BAA30898.1| (AP000007) 285aa
long hypothetical protein [Pyrococcus horikoshii]
Length = 285
Score = 493 bits (1256), Expect = e-139
Identities = 244/281 (86%), Positives = 268/281 (94%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE 60
++VKTIMT NPVTITLPATRNYAL++FKK+KVRSFPVVN+EGKLVGIIS+KR+L NPDEE
Sbjct: 4 VRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNPDEE 63
Query: 61 QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT 120
QLAMLVKRDVP VKEND LKKAA+LMLE+DYRRVVVVD++GKPVGILTVGDI+RRY AK+
Sbjct: 64 QLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKS 123
Query: 121 EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180
EKYK VEIEPYYQR+VSIVW+GTPLKAALKALLLSN+MALPVVD G L+GI+DETDLLR
Sbjct: 124 EKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 183
Query: 181 DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHMTV 240
DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPV EIMT+DVIVATPHMTV
Sbjct: 184 DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTV 243
Query: 241 YEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAK 281
+EVA KM KY IEQLPVI+GEGDL+GLIRDFDLLKVLVK+K
Sbjct: 244 HEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVKSK 284
>pir||H69232 MJ1225-related protein MTH992 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622093|gb|AAB85489.1| (AE000872)
inosine-5'-monophosphate dehydrogenase related protein
IX [Methanobacterium thermoautotrophicum]
Length = 284
Score = 173 bits (434), Expect = 2e-42
Identities = 102/280 (36%), Positives = 162/280 (57%), Gaps = 5/280 (1%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNR-EGKLVGIISIKRVLTNPDE 59
M VK IM+ N +T+P R AL++ +K V PVV + +LVGII+ ++ NPDE
Sbjct: 4 MLVKEIMSENIHYVTVPGNRATALELMRKKNVSGLPVVKKGTEELVGIITRSDLVENPDE 63
Query: 60 EQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAK 119
EQ+ +++ R+ TV +DD++ AA MLE++ RRV VVD + + VGI+T D+V +A+
Sbjct: 64 EQIVLIMTRNPVTVSPDDDVRVAAERMLENNIRRVPVVDGD-RLVGIVTSYDLVAGAIAE 122
Query: 120 TEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLL 179
+ + VE Y R++ W TPL A + + L +++ G+L G++ ETD +
Sbjct: 123 MDIQEPVE--NYMTRNIPTTWDRTPLNVAFEIMRYFRLKVLLTLNNRGKLSGVLTETDFI 180
Query: 180 RDSEIVRIMKSTELAASSE-EEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHM 238
+SE+V + +E + W +S L K +L+ P+K ++ T D++ AT
Sbjct: 181 NESEVVSESTVHNTSVGTEGDRWSWDSKNVLYVIKNQLKFPDKEARDVATTDIVTATTST 240
Query: 239 TVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLV 278
TV A+KM + +IEQ+P+I EGDLVGL R DL+ L+
Sbjct: 241 TVTSCAQKMKRRKIEQIPIIDYEGDLVGLARANDLINALI 280
>gi|11497682 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7429337|pir||F69257 MJ1225-related protein AF0062 -
Archaeoglobus fulgidus >gi|2650583|gb|AAB91162.1|
(AE001102) conserved hypothetical protein [Archaeoglobus
fulgidus]
Length = 296
Score = 164 bits (411), Expect = 1e-39
Identities = 96/284 (33%), Positives = 171/284 (59%), Gaps = 11/284 (3%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE 60
MK IM N + TLP+TR+ L++FKK+++ + PV+ + +LVGI++ K +L +E
Sbjct: 18 MKAADIMNSNVIYATLPSTRDKVLELFKKYEISAVPVL-KNSELVGIVTRKDILRKIEEN 76
Query: 61 QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT 120
QLA+L+ + TV + D+K+ +++ +RR+ VV +GK VGI+TV DI+++
Sbjct: 77 QLALLMTPNPTTVDADADVKEVVKILTSTPFRRLPVV-KDGKLVGIITVRDIIKKI---A 132
Query: 121 EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180
E E ++ Y ++ VW+ TPL + + LSN+ + +++DN EL+G+IDE +L
Sbjct: 133 EMNIEKPVKSYITPYIVCVWEETPLNVVGEIMRLSNSEFVGILNDNDELVGVIDEKIMLT 192
Query: 181 DSEIVRIMKSTELAASS--EEEWILES---HPTLLFEKFELQLPNKPVEEIMTKDVIVAT 235
++ I ++ T ++SS ++ W +S + FE ++LP +PV+ M K V
Sbjct: 193 ETLIEDFIEQTAYSSSSDTDDSWSWDSVRDYTVKYFEVSVVKLPKEPVKNFMKKPEFV-Y 251
Query: 236 PHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVK 279
P +V + AK+MV+ ++ +PV+ E L+G +RD DL++VL++
Sbjct: 252 PQTSVSKCAKRMVRSDLDYIPVLDSENRLIGTVRDKDLIRVLLE 295
>emb|CAC11353.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 278
Score = 140 bits (349), Expect = 2e-32
Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEE 60
MKV IMTP+P+T +P++ N + + K+ V P+ ++ G G +S + V NP E
Sbjct: 1 MKVSDIMTPDPITYHVPSSINEVIKVLIKYNVTGVPITDQSGHYAGFVSRRDVFANPRET 60
Query: 61 QLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKT 120
Q AM+++R V E+D+++ AA ML R + VVD +G GILT + ++
Sbjct: 61 QTAMVMRRS-KAVYEDDEVRTAALEMLAQKKRHLTVVDRDGHVKGILTPQNFMKTI---K 116
Query: 121 EKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180
E Y V+++ + +W TPL A L + +S + PV+DDNG +G++ + D+
Sbjct: 117 ENYGNVKVKEVMKETSVPIWYKTPLPAILTVMNVSGIFSFPVIDDNGTFVGLLVDRDIFD 176
Query: 181 DSEIVRIMKSTELA-ASSEEEWI---LESHPTLLFEKFELQLPNKPVEEIMTKDVIVATP 236
++ +E+ A E+ W L + + E+ +++LP +EIM K+ V
Sbjct: 177 RIDLKFDSILSEMGIADDEDPWSWTGLRNVFKYVVERADIKLPKISADEIMVKNPTVVYA 236
Query: 237 HMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKV 276
+ + A+ M+KY QLPV+ + G++ D ++L V
Sbjct: 237 NDKLSTAAELMIKYNYNQLPVLDDSHGIYGMLYDIEMLGV 276
>gb|AAG20453.1| (AE005117) Vng2351c [Halobacterium sp. NRC-1]
Length = 285
Score = 136 bits (338), Expect = 4e-31
Identities = 91/286 (31%), Positives = 162/286 (55%), Gaps = 13/286 (4%)
Query: 1 MKVKTIMTPNP--VTITLPATRNYALDIFKKHKVRSFPVV--NREGKLV-GIISIKRVLT 55
M V MTP VT+ LP TR+ L+ ++ + PVV + +G+ G+IS ++
Sbjct: 1 MNVADAMTPRDDVVTVELPGTRDDILEYLQERAFSAVPVVKASEDGERYRGLISRDDLIE 60
Query: 56 NPDEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRR 115
P+E+QLA+L+ RDVPT ++ + + A LM++ RRV VV++E + GI+TV D+VR
Sbjct: 61 RPEEDQLALLM-RDVPTTTQDTTVPEVASLMVDSGTRRVPVVEDE-RLEGIVTVTDVVRA 118
Query: 116 YLAKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDE 175
+A + + ++ +R ++ ++G PL A +++ +N V+ + G++ G++ E
Sbjct: 119 -IADGQADGDTDVGGLARRDINTTYEGAPLTVAERSISYANVPYSVVLGETGDMAGMVTE 177
Query: 176 TDLLRDSEIVRIMKST-ELAASSEEEWILESHPTL---LFEKFELQLPNKPVEEIMTKDV 231
D++ + +V +T + A+ +++W ES + +Q+P +PV E MT DV
Sbjct: 178 VDIIDVARVVEGEDNTGDSMAADDDDWKWESIKAVGSRYLPTRNVQIPAEPVREFMTSDV 237
Query: 232 IVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVL 277
+ T T + A+ M+ IEQLP++ G+ +L G++RD DLL L
Sbjct: 238 VTVTGKRTSRDAAQTMLDTDIEQLPLMSGD-ELTGIVRDVDLLAAL 282
>sp|Q58799|YE04_METJA HYPOTHETICAL PROTEIN MJ1404 >gi|2128840|pir||C64475 hypothetical
protein MJ1404 - Methanococcus jannaschii
>gi|1592053|gb|AAB99421.1| (U67581) M. jannaschii
predicted coding region MJ1404 [Methanococcus
jannaschii]
Length = 421
Score = 84.3 bits (205), Expect = 1e-15
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 25/283 (8%)
Query: 3 VKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNR-EGKL-VGIISIKRVL--TNPD 58
VK IMT + VT+T + AL I +++ VV++ +GK +IS++ +L ++ D
Sbjct: 9 VKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRDLLLASSTD 68
Query: 59 EEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLA 118
EE +++ K V E+ A ML+ R +V+N GK VGI+T DI+ R A
Sbjct: 69 EEVRSLMYKAHC--VHEDTPFLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIMAR-AA 125
Query: 119 KTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDL 178
K++ K+ ++ R+V + + + A + +N L VVDD G +G++ E D+
Sbjct: 126 KSKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDI 185
Query: 179 LRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHM 238
L+ ++ K + + E F+ ++ +PV IM +I
Sbjct: 186 LK-----KVFKPKKKMTAGE------------FKGEKVPRMGQPVRLIMNTPLITVDVDA 228
Query: 239 TVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAK 281
+ + A+ M +Y I +PV+KG+ L G++ D++K + K
Sbjct: 229 SAADAARVMQEYDIRGVPVVKGK-SLRGIVTRLDIIKYIADLK 270
>sp|Q58622|YC25_METJA HYPOTHETICAL PROTEIN MJ1225 >gi|2128050|pir||H64452 conserved
hypothetical protein MJ1225 - Methanococcus jannaschii
>gi|1591856|gb|AAB99228.1| (U67563) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 280
Score = 80.4 bits (195), Expect = 2e-14
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 43/285 (15%)
Query: 12 VTITLPATRNYALDIFKKHKVRSFPVVNR-EGKLVGIISI-------------------- 50
VT+ T AL ++K R PVVN K+VGII+
Sbjct: 15 VTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKH 74
Query: 51 KRVLTNPDEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVG 110
+R E + +++ +V T+KEN D+ +A L + +V++E + + ++T
Sbjct: 75 ERNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITER 134
Query: 111 DIVRRYLAKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELI 170
D++R L K ++ EV I+ Y R V + G LK + ++ + LPVV + G L+
Sbjct: 135 DVIRALLDKIDE-NEV-IDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSE-GRLV 191
Query: 171 GIIDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKD 230
GII TD ++ L S +W T ++ N +EEIM +D
Sbjct: 192 GIITSTDFIK------------LLGS---DWAFNHMQTGNVR----EITNVRMEEIMKRD 232
Query: 231 VIVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLK 275
VI A + ++A+ MV I LPV+ + G+I + D+LK
Sbjct: 233 VITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLK 277
Score = 80.0 bits (194), Expect = 3e-14
Identities = 59/193 (30%), Positives = 97/193 (49%), Gaps = 16/193 (8%)
Query: 3 VKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIIS----IKRVLTNPD 58
V+ IM N +T+ A + A++ F V P+VN E +L+ +I+ I+ +L D
Sbjct: 86 VREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID 145
Query: 59 E-EQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVR--- 114
E E + + RDV + LK AR M+ + +RR+ VV +EG+ VGI+T D ++
Sbjct: 146 ENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLG 204
Query: 115 -------RYLAKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNG 167
+ V +E +R V +G LK + ++ ++ ALPVVD+N
Sbjct: 205 SDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENL 264
Query: 168 ELIGIIDETDLLR 180
+ GII E D+L+
Sbjct: 265 RIKGIITEKDVLK 277
Score = 76.9 bits (186), Expect = 3e-13
Identities = 62/224 (27%), Positives = 104/224 (45%), Gaps = 46/224 (20%)
Query: 68 RDVPTVKENDDLKKAARLMLEHDYRRVVVVD-NEGKPVGILTVGDIV------RRYLAKT 120
+ + TV ++KA M E+ YRR+ VV+ K VGI+T DIV +Y
Sbjct: 12 KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIR 71
Query: 121 EKYKE-------VEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGII 173
EK++ + + +V + + + A++ L N P+V+D +LI +I
Sbjct: 72 EKHERNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLI 131
Query: 174 DETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIV 233
E D++R L +K + N+ +++ +T+DVIV
Sbjct: 132 TERDVIR----------------------------ALLDKID---ENEVIDDYITRDVIV 160
Query: 234 ATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVL 277
ATP + +VA+ MV+ +LPV+ EG LVG+I D +K+L
Sbjct: 161 ATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203
>pir||E69030 conserved hypothetical protein MJ1225 homolog - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622335|gb|AAB85713.1| (AE000890)
inosine-5'-monophosphate dehydrogenase related protein
III [Methanobacterium thermoautotrophicum]
Length = 313
Score = 76.1 bits (184), Expect = 4e-13
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 52/304 (17%)
Query: 3 VKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNR-EGKLVGIISIKRVLT------ 55
V I ++I AT A +I K+K R P+ N GKL GI++ +L
Sbjct: 31 VMAIARKEVISIPQTATIKEAAEIMVKNKFRRLPITNPGTGKLQGIVTAMDILDFLGGGD 90
Query: 56 -------NPDEEQLAM-------LVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEG 101
D+ LA ++ RDV ++ D + A +MLE+ + VVD++
Sbjct: 91 KSKIIDKKYDDNFLAAVNEPVKSIMTRDVISITTRDSIADAVSMMLENSVGALPVVDDDE 150
Query: 102 KPVGILTVGDIVRRYLAKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALP 161
K GI++ D V L + + E + V GTP++ A K ++ + +P
Sbjct: 151 KIAGIVSERDFV---LLMAGVFNDEVTEEHMTADVISTTPGTPIEGASKIMVRNRLRRIP 207
Query: 162 VV--------DDNGELIGIIDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEK 213
V+ + +L+GI+ TD+L + R + + +S EE +
Sbjct: 208 VLGEERKTPHPEEEKLVGIVTSTDIL--EFLGRNQAFSAMKTNSAEEVL----------- 254
Query: 214 FELQLPNKPVEEIMTKDVIVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDL 273
+ PV EIM V + T + V + M ++ I LPV+ G+L G+I + DL
Sbjct: 255 ------STPVNEIMETQVCMVTSTTPLGRVCELMEEHGIGGLPVV-DYGELTGIITESDL 307
Query: 274 LKVL 277
L+ +
Sbjct: 308 LRAI 311
>sp|Q58821|YE26_METJA HYPOTHETICAL PROTEIN MJ1426 >gi|2128058|pir||A64478 hypothetical
protein homolog MJ1426 - Methanococcus jannaschii
>gi|1592076|gb|AAB99437.1| (U67583)
inosine-5'-monophosphate dehydrogenase, (guaB)
[Methanococcus jannaschii]
Length = 168
Score = 75.7 bits (183), Expect = 6e-13
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 138 IVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLRDSEIVRIMKSTELAASS 197
+V++ L ++ + PV++ +G+L+GII E+D+++ IV + L S
Sbjct: 26 VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKT--IVTHNEDLNLILPS 83
Query: 198 EEEWI-LESHPTLLFEKFELQLPNK---PVEEIMTKDVIVATPHMTVYEVAKKMVKYRIE 253
+ I L L E+F L N V ++MT+ VIVA P MT+ + AK MVK I+
Sbjct: 84 PLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIK 143
Query: 254 QLPVIKGEGDLVGLIRDFDLLKVLV 278
+LPV+ EG+L+G++ DL++ L+
Sbjct: 144 RLPVVDDEGNLIGIVTRGDLIEALI 168
>pir||F72780 hypothetical protein APE0231 - Aeropyrum pernix (strain K1)
>gi|5103623|dbj|BAA79144.1| (AP000058) 287aa long
hypothetical protein [Aeropyrum pernix]
Length = 287
Score = 74.5 bits (180), Expect = 1e-12
Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 24/291 (8%)
Query: 2 KVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTN----- 56
+V + MT + T++ T +A + H + PVV KL GII+I +
Sbjct: 4 RVVSYMTRDVYTVSPDDTLAHARKLMLTHDISRLPVVEGS-KLRGIITITDIADALVRKY 62
Query: 57 PDEEQLAMLVK----RDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDI 112
P ++ V+ RDV T++ +K AA LML+H+ V VV +G GI+T D+
Sbjct: 63 PSRPANSIYVREVMARDVVTIEGTKSVKTAASLMLKHNIGGVPVVAPDGTLEGIITRTDL 122
Query: 113 VRRYLAKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGI 172
R Y +EK K V + + R + + + L+ +A ++ D G+L+G+
Sbjct: 123 TRYY---SEKMKGVNLVKEFMREIYAKARREHSIFYVLKLMEIDATGKVLILDGGKLVGV 179
Query: 173 IDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKF-ELQLPNKPV-EEIMTKD 230
I + D+ +T ++ +++ P + ++ ++ P+ E++MT +
Sbjct: 180 ITKRDI--------AFLATPVSVHGAPKYVKIKKPLVYKDRIGSTRVYLVPLAEDVMTPN 231
Query: 231 VIVATPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLLKVLVKAK 281
I P + + A MVK + LPV+ G+ +++G++ ++L+ +V ++
Sbjct: 232 PITVEPEEDLAKAADIMVKEGVGILPVVDGD-NVLGVVTKVEVLQAIVSSR 281
>pir||G75056 dehydrogenase PAB0961 - Pyrococcus abyssi (strain Orsay)
>gi|5458861|emb|CAB50348.1| (AJ248287) dehydrogenase
[Pyrococcus abyssi]
Length = 392
Score = 73.0 bits (176), Expect = 4e-12
Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNR---EGKLVGIISIKRVLTNP 57
++V+ +MT I + A + A+ I +K V + +G L + I+ L
Sbjct: 4 IQVQEVMTDRYAKIDINAPLSEAIGIIEKEDPDLILVFDDNVYKGVLTQDLIIRSHLKWD 63
Query: 58 DEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYL 117
+ V + P VK DDL AA+L+LE D R + V +N+ + +G+++ ++ R +
Sbjct: 64 PTKAKVRDVYKPAPVVKPTDDLSHAAKLLLETDLRSLPVGENKAEILGVISDMALLERVV 123
Query: 118 AKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETD 177
A E++ + ++E + + V + + AL + +PVVD+ G+L G++ D
Sbjct: 124 A--EEFGKRKVEEFMTKDVITLGPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHD 181
Query: 178 LLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEK---FELQLPNKPVEEIMTKDVIVA 234
L I+R +K A E L EK F ++L E M K VI
Sbjct: 182 L-----IIRFIKPRFKAQYGE----------LAGEKIPPFSMKL-----REAMIKGVITI 221
Query: 235 TPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLL 274
P T+ E M I+ L V+ +VG++ DLL
Sbjct: 222 MPEATIREAVSTMKDNNIDGLVVVDENNKVVGILTVKDLL 261
>pir||E75015 IMP dehydrogenase (EC 1.1.1.205) PAB1250 - Pyrococcus abyssi
(strain Orsay) >gi|5459077|emb|CAB50563.1| (AJ248288)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (EC 1.1.1.205)
(IMP DEHYDROGENASE) (IMPDH) (IMPD). [Pyrococcus abyssi]
Length = 485
Score = 73.0 bits (176), Expect = 4e-12
Identities = 43/123 (34%), Positives = 76/123 (60%), Gaps = 7/123 (5%)
Query: 2 KVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIKRVLTNPDEEQ 61
K + + + +TI+ T ++AL + +KH + PVV E K+VGIIS K + + +
Sbjct: 94 KAERFIVEDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAAR-EGKL 151
Query: 62 LAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKTE 121
+ L+ +DV TV EN ++++A ++M+E+ R+ VVD EG+ +G++T+ D+V R +
Sbjct: 152 VKELMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVAR-----K 206
Query: 122 KYK 124
KYK
Sbjct: 207 KYK 209
>pir||D71175 hypothetical protein PH0600 - Pyrococcus horikoshii
>gi|3257006|dbj|BAA29689.1| (AP000002) 392aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 392
Score = 69.1 bits (166), Expect = 6e-11
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 1 MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNR---EGKLVGIISIKRVLTNP 57
++V+ +MT I + A + A+ I +K V + +G L + I+ L
Sbjct: 4 IQVQEVMTDKYAKIDISAPLSEAIGIIEKEDPDLILVFDDNVYKGVLTQDLIIRSHLKWD 63
Query: 58 DEEQLAMLVKRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYL 117
+ + + P VK DDL AA+L+LE D R + V +N+ + +G+++ ++ R +
Sbjct: 64 PTKAKVRDIYKPAPVVKPTDDLSHAAKLLLETDLRSLPVGENKAEIIGVISDIALLERVV 123
Query: 118 AKTEKYKEVEIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETD 177
A E++ + ++E + + V + + AL + +P+V++ G+L G++ D
Sbjct: 124 A--EEFGKKKVEEFMTKDVITLTPDDTVAKALAVMRDHGISRIPIVNEEGKLEGLVTLHD 181
Query: 178 LLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEK---FELQLPNKPVEEIMTKDVIVA 234
L I+R +K A + E L+ EK F ++L E M + VI
Sbjct: 182 L-----ILRFIKPRFKAQTGE----------LVGEKIPPFSMKL-----REAMIRGVITI 221
Query: 235 TPHMTVYEVAKKMVKYRIEQLPVIKGEGDLVGLIRDFDLL 274
P TV E M I+ L V+ +VG++ DLL
Sbjct: 222 LPTATVREAVATMKDNDIDGLVVVDEGNKVVGILTVKDLL 261
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.137 0.382
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101193982
Number of Sequences: 2977
Number of extensions: 4111390
Number of successful extensions: 14433
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 14298
Number of HSP's gapped (non-prelim): 37
length of query: 282
length of database: 189,106,746
effective HSP length: 58
effective length of query: 224
effective length of database: 154,394,500
effective search space: 34584368000
effective search space used: 34584368000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)