BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2122 (rpl2P) DE:LSU ribosomal protein L2P (rpl2P)
(239 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75147 lsu ribosomal protein l2p (rpl2p) PAB2122 - Pyrococc... 496 e-140
sp|O59421|RL2_PYRHO 50S RIBOSOMAL PROTEIN L2P >gi|7440612|pir||D... 488 e-137
sp|O26113|RL2_METTH 50S RIBOSOMAL PROTEIN L2P >gi|7440613|pir||F... 309 3e-83
sp|P21479|RL2_METVA 50S RIBOSOMAL PROTEIN L2P >gi|80976|pir||S11... 279 2e-74
sp|P54017|RL2_METJA 50S RIBOSOMAL PROTEIN L2P >gi|2826257|gb|AAB... 275 4e-73
sp|Q9YFN1|RL2_AERPE 50S RIBOSOMAL PROTEIN L2P >gi|7440634|pir||H... 275 4e-73
pir||D64322 ribosomal protein L2 - Methanococcus jannaschii 275 4e-73
gi|11499506 LSU ribosomal protein L2P (rpl2P) [Archaeoglobus ful... 274 8e-73
sp|P20276|RL2_HALMA 50S RIBOSOMAL PROTEIN L2P (HMAL2) (HL4) >gi|... 272 2e-72
pdb|1FFK|A Chain A, Crystal Structure Of The Large Ribosomal Sub... 270 9e-72
gb|AAG19939.1| (AE005077) 50S ribosomal protein L2P; Rpl2p [Halo... 266 2e-70
sp|Q9UXA5|RL2_SULSO 50S RIBOSOMAL PROTEIN L2P >gi|6015760|emb|CA... 248 5e-65
gb|AAK41015.1| LSU ribosomal protein L2AB (rpl2AB) [Sulfolobus s... 248 5e-65
sp|Q06843|RL2_HALHA 50S RIBOSOMAL PROTEIN L2P >gi|11383685|pir||... 241 5e-63
sp|P41116|RL8_XENLA 60S RIBOSOMAL PROTEIN L8 >gi|630969|pir||S42... 223 1e-57
pir||T04582 ribosomal protein L8, cytosolic - Arabidopsis thalia... 222 3e-57
gi|4506663 ribosomal protein L8 [Homo sapiens] >gi|6755358|ref|N... 221 5e-57
gb|AAD20124.1| (AC006201) 60S ribosomal protein L2 [Arabidopsis ... 221 5e-57
sp|P29766|RL2_LYCES 60S RIBOSOMAL PROTEIN L2 (L8) (RIBOSOMAL PRO... 220 2e-56
sp|P25998|RL2_TOBAC 60S RIBOSOMAL PROTEIN L2 >gi|7440614|pir||S2... 219 2e-56
pir||T45750 ribosomal protein L8 homolog - Arabidopsis thaliana ... 218 6e-56
gb|AAF06828.1|AF098520_1 (AF098520) ribosomal protein L8 [Drosop... 213 1e-54
sp|P41569|RL8_AEDAL 60S RIBOSOMAL PROTEIN L8 >gi|293233|gb|AAA29... 213 2e-54
gb|AAD47076.1|AF164152_1 (AF164152) ribosomal protein L8 [Anophe... 211 6e-54
gi|6321145 Ribosomal protein L2A (L5A) (rp8) (YL6); Rpl2ap [Sacc... 210 1e-53
pir||S43423 ribosomal protein L2 - Halobacterium halobium (fragm... 209 3e-53
sp|P46286|RL2_ARATH 60S RIBOSOMAL PROTEIN L2 >gi|1076399|pir||S5... 208 7e-53
dbj|BAA78597.1| (AU066544) 60S ribosomal protein L2 [Chlamydomon... 208 7e-53
pir||T18676 hypothetical protein B0250.1 - Caenorhabditis elegan... 206 2e-52
emb|CAC12392.1| (AL445067) probable 50S ribosomal protein L2 [Th... 204 7e-52
sp|P36593|RLK5_SCHPO 60S RIBOSOMAL PROTEIN K5 >gi|2130479|pir||S... 203 2e-51
sp|P14067|RLD4_SCHPO 60S RIBOSOMAL PROTEIN KD4 >gi|71077|pir||R5... 202 3e-51
pir||C48328 ribosomal protein K37 - fission yeast (Schizosacchar... 201 8e-51
pir||A48328 ribosomal protein K5 - fission yeast (Schizosaccharo... 201 8e-51
gb|AAA92284.1| (U17360) ribosomal protein YL6b (L5) [Saccharomyc... 174 8e-43
sp|P13023|RL2_DICDI 60S RIBOSOMAL PROTEIN L2 >gi|71076|pir||R5DO... 163 2e-39
gb|AAF85800.1| (AF156372) 60S ribosomal protein L2 [Nicotiana ta... 161 1e-38
pir||R5BS2F ribosomal protein L2 - Bacillus stearothermophilus 139 2e-32
dbj|BAA31210.1| (AB015722) ribosomal protein L2 [Bacillus stearo... 139 2e-32
sp|P04257|RL2_BACST 50S RIBOSOMAL PROTEIN L2 139 2e-32
sp|Q9Z9L1|RL2_BACHD 50S RIBOSOMAL PROTEIN L2 >gi|11276683|pir||T... 136 2e-31
gi|11466368 ribosomal protein L2 [Mesostigma viride] >gi|7259511... 136 2e-31
emb|CAA38737.1| (X54994) ribosomal protein L2 [Bacillus stearoth... 135 6e-31
sp|P02387|RL2_ECOLI 50S RIBOSOMAL PROTEIN L2 >gi|71080|pir||R5EC... 135 6e-31
prf||0901234A protein L12 [Escherichia coli] 134 7e-31
sp|P38510|RL2_THEMA 50S RIBOSOMAL PROTEIN L2 >gi|7440631|pir||A7... 134 7e-31
pir||S40191 ribosomal protein L2 - Thermotoga maritima >gi|43792... 134 1e-30
sp|P55835|RL2_ACTAC 50S RIBOSOMAL PROTEIN L2 >gi|1841325|dbj|BAA... 134 1e-30
gi|7524931 50S ribosomal protein L2 [Chlorella vulgaris] >gi|302... 134 1e-30
sp|P11255|RL2_YERPS 50S RIBOSOMAL PROTEIN L2 >gi|71081|pir||R5EB... 133 2e-30
sp|P42919|RL2_BACSU 50S RIBOSOMAL PROTEIN L2 (BL2) >gi|7440626|p... 133 2e-30
sp|P57588|RL2_BUCAI 50S RIBOSOMAL PROTEIN L2 >gi|10039180|dbj|BA... 133 2e-30
gi|11467342 ribosomal protein L2 [Cyanophora paradoxa] >gi|13285... 132 3e-30
gb|AAC45959.1| (U43929) L2 [Bacillus subtilis] 132 3e-30
sp|P49239|RL2_YEREN 50S RIBOSOMAL PROTEIN L2 >gi|1032300|gb|AAC4... 132 4e-30
emb|CAB53116.1| (AJ245645) 50S ribosomal protein L2 [Prototheca ... 132 4e-30
gi|11466745 ORF203 [Marchantia polymorpha] >gi|132858|sp|P06378|... 132 5e-30
sp|P44343|RL2_HAEIN 50S RIBOSOMAL PROTEIN L2 >gi|1075239|pir||H6... 131 6e-30
sp|O62954|RK2_PICAB CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|744... 131 6e-30
gb|AAC95308.1| (AF050665) ribosomal protein L2 [Spirogyra maxima] 131 1e-29
gi|7524696 ribosomal protein L2 [Pinus thunbergii] >gi|7440632|p... 129 2e-29
pir||C82059 ribosomal protein L2 VC2593 [imported] - Vibrio chol... 128 5e-29
gb|AAF82677.1| (AF188855) ribosomal protein L2 [Nymphaea odorata] 127 9e-29
gi|11497599 ribosomal protein l12 [Spinacia oleracea] >gi|668231... 127 9e-29
gi|11467468 50S ribosomal protein L2 [Odontella sinensis] >gi|13... 127 1e-28
sp|O83222|RL2_TREPA 50S RIBOSOMAL PROTEIN L2 >gi|7440620|pir||B7... 127 1e-28
sp|P27107|RK2_SINAL CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|122... 127 2e-28
sp|P95052|RL2_MYCTU 50S RIBOSOMAL PROTEIN L2 >gi|7440630|pir||C7... 127 2e-28
gb|AAG26136.1| (AF123788) ribosomal protein L2 [Calycanthus flor... 127 2e-28
gb|AAG26145.1| (AF123797) ribosomal protein L2 [Saururus cernuus] 127 2e-28
sp|O06047|RL2_MYCBO 50S RIBOSOMAL PROTEIN L2 >gi|2113869|emb|CAA... 126 2e-28
sp|O66434|RL2_AQUAE 50S RIBOSOMAL PROTEIN L2 >gi|7440628|pir||G7... 126 2e-28
gi|7525074 ribosomal protein L2 [Arabidopsis thaliana] >gi|75250... 126 2e-28
gb|AAG26146.1| (AF123798) ribosomal protein L2 [Trochodendron ar... 126 2e-28
gi|11465998 ribosomal protein L2 [Nicotiana tabacum] >gi|1146603... 126 3e-28
gi|11467720 ribosomal protein L2 [Guillardia theta] >gi|3914662|... 126 3e-28
gb|AAG26141.1| (AF123793) ribosomal protein L2 [Ginkgo biloba] 126 3e-28
gb|AAG26143.1| (AF123795) ribosomal protein L2 [Lactoris fernand... 126 3e-28
gi|11467776 ribosomal protein L2 [Nephroselmis olivacea] >gi|588... 125 4e-28
gb|AAG26144.1| (AF123796) ribosomal protein L2 [Liriodendron tul... 125 4e-28
emb|CAA55028.1| (X78185) rpl 2 [Hordeum vulgare] 125 5e-28
sp|P41096|RK2_HORVU CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 125 5e-28
sp|O24692|RL2_SYNP6 50S RIBOSOMAL PROTEIN L2 >gi|2446893|dbj|BAA... 125 5e-28
sp|P94270|RL2_BORBU 50S RIBOSOMAL PROTEIN L2 >gi|7440627|pir||H7... 125 5e-28
pir||B75534 ribosomal protein L2 - Deinococcus radiodurans (stra... 125 5e-28
gb|AAG26133.1| (AF123785) ribosomal protein L2 [Acorus calamus] 125 5e-28
gb|AAG26135.1| (AF123787) ribosomal protein L2 [Cabomba carolini... 125 5e-28
gb|AAG26137.1| (AF123789) ribosomal protein L2 [Ceratophyllum de... 125 5e-28
gb|AAG26140.1| (AF123792) ribosomal protein L2 [Drimys winteri] 125 5e-28
gi|11466971 ribosomal protein L2 [Epifagus virginiana] >gi|11466... 125 6e-28
gb|AAB36825.1| (U78193) ribosomal protein L2 [Borrelia burgdorferi] 125 6e-28
sp|O32984|RL2_MYCLE 50S RIBOSOMAL PROTEIN L2 >gi|11276684|pir||T... 125 6e-28
emb|CAB67201.1| (AJ271079) ribosomal protein L2 [Oenothera elata... 125 6e-28
sp|P17351|RK2_ORYSA CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|710... 124 8e-28
sp|Q50264|RL2_ASTYP 50S RIBOSOMAL PROTEIN L2 >gi|149866|gb|AAA25... 124 8e-28
gi|11466866 ribosomal protein L2 [Oryza sativa] >gi|11466870|ref... 124 8e-28
gi|11465777 50S ribosomal protein L2 [Porphyra purpurea] >gi|171... 124 8e-28
pir||D82005 50S ribosomal protein L2 NMA0126 [imported] - Neisse... 124 8e-28
pir||B83116 50S ribosomal protein L2 PA4260 [imported] - Pseudom... 124 1e-27
gb|AAG26139.1| (AF123791) ribosomal protein L2 [Dioscorea bulbif... 124 1e-27
gi|11467235 ribosomal protein L2 [Zea mays] >gi|11467278|ref|NP_... 123 1e-27
sp|P73317|RL2_SYNY3 50S RIBOSOMAL PROTEIN L2 >gi|7440623|pir||S7... 123 1e-27
gb|AAD15254.1| (L40578) ribosomal protein L2 [Oryza sativa] 123 1e-27
emb|CAA37241.1| (X53066) ribosomal protein L2 [Zea mays] 123 1e-27
sp|P47400|RL2_MYCGE 50S RIBOSOMAL PROTEIN L2 >gi|1361800|pir||A6... 123 2e-27
sp|Q9ZI47|RL2_AQUPY 50S RIBOSOMAL PROTEIN L2 >gi|4165868|gb|AAD0... 123 2e-27
gi|11465425 unknown; 50S ribosomal protein L2 [Cyanidium caldari... 123 2e-27
sp|Q9XD33|RL2_LEPIN 50S RIBOSOMAL PROTEIN L2 >gi|5163207|gb|AAD4... 122 3e-27
pir||C81231 50S ribosomal protein L2 NMB0145 [imported] - Neisse... 122 3e-27
gb|AAG26138.1| (AF123790) ribosomal protein L2 [Cercidiphyllum j... 122 3e-27
gi|11466510 ribosomal protein L2 [Reclinomonas americana] >gi|39... 122 4e-27
gb|AAD11874.2| (AF007261) ribosomal protein L2 [Reclinomonas ame... 122 4e-27
gb|AAG26142.1| (AF123794) ribosomal protein L2 [Illicium parvifl... 122 4e-27
gi|11467006 50S ribosomal protein L2 [Euglena gracilis] >gi|1328... 122 5e-27
sp|P21434|RK2_NICDE CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|710... 122 5e-27
gb|AAG26134.1| (AF123786) ribosomal protein L2 [Asarum canadense] 122 5e-27
pir||B54547 ribosomal protein 12 - mycoplasma-like organism MLO ... 121 7e-27
sp|P06509|RK2_SPIOL CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 (RIBOSO... 121 9e-27
pir||C82717 50S ribosomal protein L2 XF1155 [imported] - Xylella... 120 1e-26
gi|9695401 ribosomal protein L2 [Phytophthora infestans] >gi|669... 120 2e-26
sp|P75577|RL2_MYCPN 50S RIBOSOMAL PROTEIN L2 >gi|2146599|pir||S7... 120 2e-26
sp|P31163|RK2_PEA CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|81970... 119 3e-26
pir||C82915 ribosomal protein L2 UU234 [imported] - Ureaplasma u... 119 3e-26
pdb|1RL2|B Chain B, Ribosomal Protein L2 Rna-Binding Domain From... 119 4e-26
pdb|487D|I Chain I, Seven Ribosomal Proteins Fitted To A Cryo-El... 119 4e-26
gb|AAF73305.1| (AF188849) ribosomal protein L2 [Zamia furfuracea] 118 5e-26
emb|CAB82073.1| (AL161803) 50S ribosomal protein L2 [Streptomyce... 117 1e-25
sp|P34768|RK2_ASTLO CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|481... 117 1e-25
sp|Q9ZCQ8|RL2_RICPR 50S RIBOSOMAL PROTEIN L2 >gi|7440619|pir||F7... 114 9e-25
sp|Q9Z7R0|RL2_CHLPN 50S RIBOSOMAL PROTEIN L2 >gi|7440616|pir||F7... 111 8e-24
pir||D81268 50S ribosomal protein L2 Cj1704c [imported] - Campyl... 111 8e-24
sp|O84530|RL2_CHLTR 50S RIBOSOMAL PROTEIN L2 >gi|7440629|pir||C7... 109 2e-23
pir||A81661 ribosomal protein L2 TC0812 [imported] - Chlamydia m... 109 3e-23
sp|P56030|RL2_HELPY 50S RIBOSOMAL PROTEIN L2 >gi|7440624|pir||D6... 109 4e-23
sp|Q9ZJR6|RL2_HELPJ 50S RIBOSOMAL PROTEIN L2 >gi|7440618|pir||D7... 108 7e-23
pir||R5YM2C ribosomal protein L2 - Mycoplasma capricolum 108 9e-23
sp|O52335|RL2_MYCGA 50S RIBOSOMAL PROTEIN L2 >gi|2766506|gb|AAB9... 108 9e-23
sp|P10133|RL2_MYCCA 50S RIBOSOMAL PROTEIN L2 >gi|44212|emb|CAA29... 105 6e-22
sp|P92812|RM02_ORYSA MITOCHONDRIAL 60S RIBOSOMAL PROTEIN L2 100 2e-20
pir||T03019 probable ribosomal protein L2 [imported] - rice mito... 100 3e-20
dbj|BAA25829.1| (AB007168) ribosomal protein L8 [Homo sapiens] 94 1e-18
gi|6320785 mitochondrial ribosomal protein L2 of the large subun... 88 1e-16
gi|7524993 ribosomal protein L2 [Dictyostelium discoideum] >gi|1... 85 7e-16
gi|11466197 ribosomal protein L2 [Naegleria gruberi] >gi|1044423... 76 5e-13
>pir||F75147 lsu ribosomal protein l2p (rpl2p) PAB2122 - Pyrococcus abyssi
(strain Orsay) >gi|5457771|emb|CAB49261.1| (AJ248284)
LSU ribosomal protein L2P (rpl2P) [Pyrococcus abyssi]
Length = 239
Score = 496 bits (1264), Expect = e-140
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK
Sbjct: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY
Sbjct: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
KYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK
Sbjct: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
>sp|O59421|RL2_PYRHO 50S RIBOSOMAL PROTEIN L2P >gi|7440612|pir||D71187 probable
ribosomal protein L2 - Pyrococcus horikoshii
>gi|3258208|dbj|BAA30891.1| (AP000007) 239aa long
hypothetical 50S ribosomal protein L2 [Pyrococcus
horikoshii]
Length = 239
Score = 488 bits (1243), Expect = e-137
Identities = 231/239 (96%), Positives = 238/239 (98%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT+RGVVEEIMHDPGRTAPVAR
Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTIRGVVEEIMHDPGRTAPVAR 60
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V+FENGMEKLIIAPEGLLVGQEIYIGPDAP+ IGNTLPLAKIPEGTY+YNIEG+PGDGGK
Sbjct: 61 VKFENGMEKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGVPGDGGK 120
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
YVRAGGTYALVVSREKDKVIVQLPSGELKAF+PNCRATIGVVAGGGRLEKPLVKAGKAYY
Sbjct: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
KYKARN+FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK
Sbjct: 181 KYKARNKFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
>sp|O26113|RL2_METTH 50S RIBOSOMAL PROTEIN L2P >gi|7440613|pir||F69165 ribosomal protein
L2 - Methanobacterium thermoautotrophicum (strain Delta
H) >gi|2621052|gb|AAB84525.1| (AE000795) ribosomal
protein L8 (E.coli L2) [Methanobacterium
thermoautotrophicum]
Length = 241
Score = 309 bits (782), Expect = 3e-83
Identities = 147/241 (60%), Positives = 188/241 (77%), Gaps = 2/241 (0%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MGK LI QRRG+G+PT+RS SHRF+G +KY + + + +L+G V +IMHDPGRTAPVA
Sbjct: 1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVA 60
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
RV+FENG E+LI+APE L++ +E+ G A + GN+LPL++IPEGT +YNIE PGDGG
Sbjct: 61 RVKFENGEERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENRPGDGG 120
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K VR+ GTYA +++ + DK +++LPSGELKA NP CRAT+GVVAGGGR EKP +KAGK Y
Sbjct: 121 KLVRSSGTYASLITHDADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPFLKAGKKY 180
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPF-GGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRR 238
+ +A+ + T RGV MNAV+HP GG HPG+PTT SR APPGRKVG IAARRTG+R
Sbjct: 181 HALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAARRTGKR 240
Query: 239 K 239
+
Sbjct: 241 R 241
>sp|P21479|RL2_METVA 50S RIBOSOMAL PROTEIN L2P >gi|80976|pir||S11596 ribosomal protein
L2 - Methanococcus vannielii
Length = 237
Score = 279 bits (706), Expect = 2e-74
Identities = 140/237 (59%), Positives = 171/237 (72%), Gaps = 2/237 (0%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MGK LI Q RG+G+P +RSPSH+ +G VKY + + + G V +++HDPGR+APVA
Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVA 60
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
+VRF NG E+L++ PEG+ VG++I G A I GN LPL +IPEG VYNIE IPGDGG
Sbjct: 61 KVRFANGEERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGG 120
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K VRAGG YA VV+ + K IV+LPSG K NP CRATIGVVAGGGR EKP VKAGK +
Sbjct: 121 KLVRAGGCYAHVVAHDIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKH 180
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRT 235
+ A+ WP RGV MNAV+HP+GG H H GKP++ SR PGRKVGHIA+RRT
Sbjct: 181 HSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRT 237
>sp|P54017|RL2_METJA 50S RIBOSOMAL PROTEIN L2P >gi|2826257|gb|AAB98164.1| (U67474) LSU
ribosomal protein L2P (rplB) [Methanococcus jannaschii]
Length = 242
Score = 275 bits (695), Expect = 4e-73
Identities = 140/242 (57%), Positives = 171/242 (69%), Gaps = 3/242 (1%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MGK LI QRRG+GS + PSH+ RG KY + + K + G + +I+HDPGR+APVA
Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVA 60
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
+V +E G E L++ PEG+ VG I G A I GN LPL IPEG V+NIE +PGDGG
Sbjct: 61 KVEYETGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGG 120
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K VRAGG YA +++ + ++ V+LPSG +KA + CRATIGVVAGGGR EKP VKAGK Y
Sbjct: 121 KLVRAGGCYAHILTHDGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKY 180
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSR-RAPPGRKVGHIAARRTGR 237
+ KA+ WP RGV MNAV+HPFGG H H GKPTT SR + PPGRKVGHI+ARRTG
Sbjct: 181 HAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHISARRTGV 240
Query: 238 RK 239
RK
Sbjct: 241 RK 242
>sp|Q9YFN1|RL2_AERPE 50S RIBOSOMAL PROTEIN L2P >gi|7440634|pir||H72778 probable
ribosomal protein L2 APE0218 - Aeropyrum pernix (strain
K1) >gi|5103609|dbj|BAA79130.1| (AP000058) 238aa long
hypothetical 50S ribosomal protein L2 [Aeropyrum pernix]
Length = 238
Score = 275 bits (695), Expect = 4e-73
Identities = 143/240 (59%), Positives = 173/240 (71%), Gaps = 4/240 (1%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGK L QQR G+G+PT+RS +H G KY PL+ TLRG V E++HDPGR P+AR
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS---GDTLRGKVVELIHDPGRYVPLAR 57
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V E+G+E L+ A EG+ VGQ I IGP A GN LPL KIPEGT V+N+E PGDGGK
Sbjct: 58 VVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGK 117
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
R G+YALVV R K I++LPSG+ K + RATIG+ AG GR+EKP++KAG AY+
Sbjct: 118 LARQAGSYALVVGRAGAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYH 177
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
K+K + R WP RGV MNAV+HPFGG H H G+P+T +R APPGRKVGHIAARRTGRRK
Sbjct: 178 KWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAARRTGRRK 237
>pir||D64322 ribosomal protein L2 - Methanococcus jannaschii
Length = 246
Score = 275 bits (695), Expect = 4e-73
Identities = 140/242 (57%), Positives = 171/242 (69%), Gaps = 3/242 (1%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MGK LI QRRG+GS + PSH+ RG KY + + K + G + +I+HDPGR+APVA
Sbjct: 5 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVA 64
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
+V +E G E L++ PEG+ VG I G A I GN LPL IPEG V+NIE +PGDGG
Sbjct: 65 KVEYETGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGG 124
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K VRAGG YA +++ + ++ V+LPSG +KA + CRATIGVVAGGGR EKP VKAGK Y
Sbjct: 125 KLVRAGGCYAHILTHDGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKY 184
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSR-RAPPGRKVGHIAARRTGR 237
+ KA+ WP RGV MNAV+HPFGG H H GKPTT SR + PPGRKVGHI+ARRTG
Sbjct: 185 HAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHISARRTGV 244
Query: 238 RK 239
RK
Sbjct: 245 RK 246
>gi|11499506 LSU ribosomal protein L2P (rpl2P) [Archaeoglobus fulgidus]
>gi|3914724|sp|O28357|RL2_ARCFU 50S RIBOSOMAL PROTEIN
L2P >gi|7440615|pir||A69490 LSU ribosomal protein L2P
(rpl2P) homolog - Archaeoglobus fulgidus
>gi|2648624|gb|AAB89334.1| (AE000971) LSU ribosomal
protein L2P (rpl2P) [Archaeoglobus fulgidus]
Length = 237
Score = 274 bits (693), Expect = 8e-73
Identities = 138/240 (57%), Positives = 168/240 (69%), Gaps = 4/240 (1%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGK +I Q RGKG+PT+R+PSHR++ K + +D+ + V +I HD R PVA
Sbjct: 1 MGKRIISQNRGKGTPTYRAPSHRYKTDAKLLRF---KDEVVAAKVIDIQHDSARNGPVAL 57
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V+ +G E I+A EGL G +Y G + IA GN L IPEGT V NIE PGDGGK
Sbjct: 58 VKLPDGSETYILAVEGLGTGDVVYAGDNVEIASGNITYLKNIPEGTPVCNIEAQPGDGGK 117
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
++RA GT+ VVSRE DKV+VQ+PSG+ K F+PNCRA IGVVAGGGR +KP VKAGK Y+
Sbjct: 118 FIRASGTFGFVVSREADKVLVQMPSGKQKWFHPNCRAMIGVVAGGGRTDKPFVKAGKKYH 177
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
K K++ WP RGV MNAV+HPFGG +H H GKP T SR APPGRKVG IAARRTG R+
Sbjct: 178 KMKSKAAKWPRVRGVAMNAVDHPFGGGKHQHVGKPKTVSRNAPPGRKVGSIAARRTGVRR 237
>sp|P20276|RL2_HALMA 50S RIBOSOMAL PROTEIN L2P (HMAL2) (HL4) >gi|71079|pir||R5HS2L
ribosomal protein L2 [similarity] - Haloarcula
marismortui >gi|148804|gb|AAA86862.1| (J05222) ribosomal
protein L2 [Haloarcula marismortui]
Length = 240
Score = 272 bits (689), Expect = 2e-72
Identities = 132/238 (55%), Positives = 172/238 (71%), Gaps = 3/238 (1%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MG+ + QRRG+G+ TFR+PSHR++ +++ + + G V +I HDP R+APVA
Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVE--DGDVIAGTVVDIEHDPARSAPVAA 58
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V FE+G +LI+APEG+ VG E+ +G DA IA GNTLPLA+IPEG V N+E PGDGGK
Sbjct: 59 VEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGK 118
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
+ RA G A +++ +++ +V+LPSGE+K +P CRATIGVV GGGR +KP VKAG ++
Sbjct: 119 FARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHH 178
Query: 181 KYKARNRFWPTPRGVKMNAVNHPF-GGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGR 237
K KAR WP RGV MNAV+HPF GG HPGKP + SR APPGRKVG IA++RTGR
Sbjct: 179 KMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGR 236
>pdb|1FFK|A Chain A, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 239
Score = 270 bits (684), Expect = 9e-72
Identities = 131/237 (55%), Positives = 171/237 (71%), Gaps = 3/237 (1%)
Query: 2 GKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARV 61
G+ + QRRG+G+ TFR+PSHR++ +++ + + G V +I HDP R+APVA V
Sbjct: 1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVE--DGDVIAGTVVDIEHDPARSAPVAAV 58
Query: 62 RFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
FE+G +LI+APEG+ VG E+ +G DA IA GNTLPLA+IPEG V N+E PGDGGK+
Sbjct: 59 EFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKF 118
Query: 122 VRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYK 181
RA G A +++ +++ +V+LPSGE+K +P CRATIGVV GGGR +KP VKAG ++K
Sbjct: 119 ARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHK 178
Query: 182 YKARNRFWPTPRGVKMNAVNHPF-GGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGR 237
KAR WP RGV MNAV+HPF GG HPGKP + SR APPGRKVG IA++RTGR
Sbjct: 179 MKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGR 235
>gb|AAG19939.1| (AE005077) 50S ribosomal protein L2P; Rpl2p [Halobacterium sp.
NRC-1]
Length = 240
Score = 266 bits (673), Expect = 2e-70
Identities = 136/239 (56%), Positives = 171/239 (70%), Gaps = 5/239 (2%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MG+ + QRRG+G+ TFR+PSHR++ + + T+D L G V ++ HDP R+APVA
Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSH---KRTEDTDVLAGEVIDVEHDPARSAPVA 57
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
RV FE+ ++L++A EG+ VG I IG A I GNTLPLA+IPEG V N+E PGDGG
Sbjct: 58 RVAFEDDDQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGG 117
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K+ RAGG A +V+ E+D IV+LPSGE K +P+CRATIGVVAGGGR EKP VKAG +
Sbjct: 118 KFARAGGVNADLVTHERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKH 177
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPF-GGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGR 237
+K KAR WP RGV MNAV+HPF GG HPG+P + SR A PGRKVG IA++RTGR
Sbjct: 178 HKMKARGTKWPRVRGVAMNAVDHPFGGGGRQHPGRPKSVSRDAAPGRKVGDIASKRTGR 236
>sp|Q9UXA5|RL2_SULSO 50S RIBOSOMAL PROTEIN L2P >gi|6015760|emb|CAB57587.1| (Y18930)
ribosomal protein L2 (HMAL2) [Sulfolobus solfataricus]
Length = 238
Score = 248 bits (626), Expect = 5e-65
Identities = 127/240 (52%), Positives = 168/240 (69%), Gaps = 5/240 (2%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGK+L+QQR GKGSPTFR+P G V+Y P + G V +I+H+PG APVA
Sbjct: 1 MGKNLLQQRAGKGSPTFRNPGWLRIGKVRY-PNIFGH---FIGKVIDIVHNPGMNAPVAL 56
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V+ ENG + L+ A +GL+V Q+I G +PIA GN + + PEGT V N+E GDGGK
Sbjct: 57 VKLENGTKFLMQAIQGLVVNQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGK 116
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
Y R+ G+YA+VV + D+V+++LPS ++KA + RAT+G+VAGGG +EKPL+KAG Y+
Sbjct: 117 YARSAGSYAVVVGKSGDRVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPLLKAGANYW 176
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEHHP-GKPTTTSRRAPPGRKVGHIAARRTGRRK 239
KYK + + WP RGV MN V+HP GG H +P+T SR APPGRKVGHIAARRTGR++
Sbjct: 177 KYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKE 236
>gb|AAK41015.1| LSU ribosomal protein L2AB (rpl2AB) [Sulfolobus solfataricus]
Length = 238
Score = 248 bits (626), Expect = 5e-65
Identities = 127/240 (52%), Positives = 168/240 (69%), Gaps = 5/240 (2%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGK+L+QQR GKGSPTFR+P G V+Y P + G V +I+H+PG APVA
Sbjct: 1 MGKNLLQQRAGKGSPTFRNPGWLRIGKVRY-PNIFGH---FIGKVIDIVHNPGMNAPVAL 56
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
V+ ENG + L+ A +GL+V Q+I G +PIA GN + + PEGT V N+E GDGGK
Sbjct: 57 VKLENGTKFLMQAIQGLVVNQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGK 116
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
Y R+ G+YA+VV + D+V+++LPS ++KA + RAT+G+VAGGG +EKPL+KAG Y+
Sbjct: 117 YARSAGSYAVVVGKSGDRVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPLLKAGANYW 176
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEHHP-GKPTTTSRRAPPGRKVGHIAARRTGRRK 239
KYK + + WP RGV MN V+HP GG H +P+T SR APPGRKVGHIAARRTGR++
Sbjct: 177 KYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKE 236
>sp|Q06843|RL2_HALHA 50S RIBOSOMAL PROTEIN L2P >gi|11383685|pir||T43819 ribosomal
protein L2 [similarity] - Halobacterium salinarum
>gi|2425179|dbj|BAA22273.1| (AB006961) ribosomal protein
L2 [Halobacterium halobium]
Length = 237
Score = 241 bits (609), Expect = 5e-63
Identities = 130/238 (54%), Positives = 163/238 (67%), Gaps = 6/238 (2%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MG+ + QRRG+G+ TFR+PSHR++ + + T+D L G V ++ HDP RTA VA
Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSH---KRTEDTDVLAGEVIDVEHDPARTA-VA 56
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
RV FE+ ++L++A EG+ VG I I A I GNTLPLA+IPEG V N+E PGDGG
Sbjct: 57 RVAFEDDDQRLVLASEGVGVGDTIEIESSATIEEGNTLPLAEIPEGVPVCNVESHPGDGG 116
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K R G A +V+ E+D IV+L SGE K +P+CRATIGVVAGGGR EKP VKAG +
Sbjct: 117 KLPR-GRVNADLVTHERDATIVELASGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKH 175
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGR 237
+K KAR WP RGV MNAV+HPFG PG+P + SR A PGRKVG IA++RTGR
Sbjct: 176 HKMKARGTKWPRVRGVAMNAVDHPFGAVAARPGRPKSVSRDAAPGRKVGDIASKRTGR 233
>sp|P41116|RL8_XENLA 60S RIBOSOMAL PROTEIN L8 >gi|630969|pir||S42725 ribosomal protein
L8, cytosolic - African clawed frog
>gi|392925|gb|AAA18911.1| (U00920) ribosomal protein L8
[Xenopus laevis]
Length = 257
Score = 223 bits (563), Expect = 1e-57
Identities = 121/246 (49%), Positives = 159/246 (64%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS HR +GA K +++ + + ++G+V++I+HDPGR AP+A
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHR-KGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLA 59
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F + +L +A EG+ GQ +Y G A + IGN LP+ +PEGT V +E
Sbjct: 60 KVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
PGD GK RA G YA V+S E K V+LPSG K + RA +GVVAGGGR++KP+
Sbjct: 120 PGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPI 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+AY+KYKA+ WP RGV MN V HPFGG H H GKP+T R AP GRKVG IA
Sbjct: 180 LKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>pir||T04582 ribosomal protein L8, cytosolic - Arabidopsis thaliana
>gi|2961372|emb|CAA18119.1| (AL022141) putative
ribosomal protein L8 [Arabidopsis thaliana]
>gi|3036817|emb|CAA18507.1| (AL022373) ribosomal protein
L2 [Arabidopsis thaliana] >gi|7270565|emb|CAB81522.1|
(AL161588) putative ribosomal protein L8 [Arabidopsis
thaliana]
Length = 258
Score = 222 bits (560), Expect = 3e-57
Identities = 118/246 (47%), Positives = 156/246 (62%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F+S +H +G K+ L++ + + L+GVV EI+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG + N+E
Sbjct: 60 RVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHH 119
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G + RA G YA+V++ + D ++LPSG K CRA IG VAGGGR EKP+
Sbjct: 120 VGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KY+ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 180 LKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>gi|4506663 ribosomal protein L8 [Homo sapiens] >gi|6755358|ref|NP_036183.1|
ribosomal protein L8 [Mus musculus]
>gi|11424356|ref|XP_005130.1| ribosomal protein L8 [Homo
sapiens] >gi|133027|sp|P25120|RL8_HUMAN 60S RIBOSOMAL
PROTEIN L8 >gi|71075|pir||R5RTL8 ribosomal protein L8,
cytosolic [validated] - rat >gi|478326|pir||JN0923
ribosomal protein L8, cytosolic - human
>gi|57704|emb|CAA44071.1| (X62145) ribosomal protein L8
[Rattus rattus] >gi|433899|emb|CAA82248.1| (Z28407)
ribosomal protein L8 [Homo sapiens]
>gi|1527178|gb|AAC35587.1| (U67771) ribosomal protein L8
[Mus musculus]
Length = 257
Score = 221 bits (558), Expect = 5e-57
Identities = 121/246 (49%), Positives = 159/246 (64%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS FR+ +GA + +++ + ++G+V++I+HDPGR AP+A
Sbjct: 1 MGRVIRGQRKGAGS-VFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLA 59
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F + +L IA EG+ GQ +Y G A + IGN LP+ +PEGT V +E
Sbjct: 60 KVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
PGD GK RA G YA V+S E K V+LPSG K + RA +GVVAGGGR++KP+
Sbjct: 120 PGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPI 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+AY+KYKA+ WP RGV MN V HPFGG H H GKP+T R AP GRKVG IA
Sbjct: 180 LKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>gb|AAD20124.1| (AC006201) 60S ribosomal protein L2 [Arabidopsis thaliana]
Length = 258
Score = 221 bits (558), Expect = 5e-57
Identities = 119/246 (48%), Positives = 155/246 (62%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F+S +H +G K+ L++ + + L+GVV EI+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG V N+E
Sbjct: 60 RVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHH 119
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G RA G YA+V++ + D ++LPSG K CRA IG VAGGGR EKP+
Sbjct: 120 VGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KY+ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 180 LKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>sp|P29766|RL2_LYCES 60S RIBOSOMAL PROTEIN L2 (L8) (RIBOSOMAL PROTEIN TL2)
>gi|71078|pir||R5TOL8 ribosomal protein L8, cytosolic -
tomato >gi|19343|emb|CAA45863.1| (X64562) ribosomal
protein L2 [Lycopersicon esculentum]
Length = 260
Score = 220 bits (554), Expect = 2e-56
Identities = 117/246 (47%), Positives = 154/246 (62%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F+S +H +G ++ L++ + + L+GV+ E++HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG V N+E
Sbjct: 60 RVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKDK--VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G + R G YA+V+S D V+LPSG K CRA IG VAGGGR EKP+
Sbjct: 120 VGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KY+ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 180 LKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>sp|P25998|RL2_TOBAC 60S RIBOSOMAL PROTEIN L2 >gi|7440614|pir||S22641 ribosomal protein
L2, cytosolic - common tobacco >gi|20001|emb|CAA44362.1|
(X62500) 60S ribosomal protein L2 [Nicotiana tabacum]
Length = 260
Score = 219 bits (553), Expect = 2e-56
Identities = 115/246 (46%), Positives = 153/246 (61%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F+S +H +G ++ L++ + + L+GV+ E++HDPGR AP+A
Sbjct: 1 MGRLIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLA 59
Query: 60 RVRFE-----NGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F N ++L +A EG+ GQ +Y G A + +GN LPL IPEG V N+E
Sbjct: 60 RVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKDK--VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G + R G YA+V+S D ++LPSG K CR IG VAGGGR EKP+
Sbjct: 120 VGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KY+ + WP RGV MN V HP GG H H G +T +R APPG+KVG IA
Sbjct: 180 LKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIA 239
Query: 232 ARRTGR 237
RRTGR
Sbjct: 240 GRRTGR 245
>pir||T45750 ribosomal protein L8 homolog - Arabidopsis thaliana
>gi|6562271|emb|CAB62641.1| (AL132980) ribosomal protein
L8 homolog [Arabidopsis thaliana]
Length = 260
Score = 218 bits (549), Expect = 6e-56
Identities = 117/248 (47%), Positives = 151/248 (60%), Gaps = 9/248 (3%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G F+S +H +G K+ L+Y + + L+G+V EI+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F + ++L +A EG+ GQ +Y G A + +GN LPL IPEG + N+E
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G RA G YA+V++ E + V+LPSG K CRA IG VAGGGR EKP
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPF 180
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KYKA+ WP RGV MN V HP GG H H G +T R G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240
Query: 232 ARRTGRRK 239
ARRTGRR+
Sbjct: 241 ARRTGRRR 248
>gb|AAF06828.1|AF098520_1 (AF098520) ribosomal protein L8 [Drosophila melanogaster]
>gi|7292250|gb|AAF47659.1| (AE003475) RpL8 gene product
[alt 1] [Drosophila melanogaster]
>gi|7292251|gb|AAF47660.1| (AE003475) RpL8 gene product
[alt 2] [Drosophila melanogaster]
Length = 256
Score = 213 bits (538), Expect = 1e-54
Identities = 115/246 (46%), Positives = 157/246 (63%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F++ + +GA K L++ + +RGVV++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
V F + ++L IAPEG+ GQ +Y G A + IGN +PL+++PEGT + N+E
Sbjct: 60 VVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G+ R G YA V++ +D K V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 120 TGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPI 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+AY+KYK + WP RGV MN V HP GG H H GK +T R GRKVG IA
Sbjct: 180 LKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>sp|P41569|RL8_AEDAL 60S RIBOSOMAL PROTEIN L8 >gi|293233|gb|AAA29353.1| (M99055)
ribosomal protein L8 [Aedes albopictus]
Length = 261
Score = 213 bits (536), Expect = 2e-54
Identities = 117/246 (47%), Positives = 153/246 (61%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G+GS F + + + +G K L+Y + L+G V++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGEGS-VFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLA 59
Query: 60 RVRFE-----NGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
V F N ++L IA EG+ GQ +Y G A + IGN LP+ +PEGT V N+E
Sbjct: 60 VVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD GK R G YA V++ D + V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 120 TGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPI 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+AY KYK + WP RGV MN V HP GG H H GK +T R PPGRKVG IA
Sbjct: 180 LKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>gb|AAD47076.1|AF164152_1 (AF164152) ribosomal protein L8 [Anopheles gambiae]
Length = 261
Score = 211 bits (532), Expect = 6e-54
Identities = 116/246 (47%), Positives = 154/246 (62%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS FR+ + + +G K L+Y + L+GVV++I+ DPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
V F + ++L IA EG+ GQ +Y G A + IGN +P+ +PEGT V N+E
Sbjct: 60 VVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD GK R G YA V++ D + V+LPSG K RA +G+VAGGGR++KP+
Sbjct: 120 TGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPI 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+AY+KYK + WP RGV MN V HP GG H H GK +T R PPGRKVG IA
Sbjct: 180 LKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>gi|6321145 Ribosomal protein L2A (L5A) (rp8) (YL6); Rpl2ap [Saccharomyces
cerevisiae] >gi|6322171|ref|NP_012246.1| Ribosomal
protein L2B (L5B) (rp8) (YL6); Rpl2bp [Saccharomyces
cerevisiae] >gi|730569|sp|P05736|RL6_YEAST 60S RIBOSOMAL
PROTEIN L2 (YL6) (L5) (RP8) >gi|1071982|pir||S50243
ribosomal protein L8.e, cytosolic - yeast (Saccharomyces
cerevisiae) >gi|596084|gb|AAA92283.1| (U17359) ribosomal
protein YL6 (L5) [Saccharomyces cerevisiae]
>gi|599981|emb|CAA86974.1| (Z46881) putative 60S
ribosomal protein [Saccharomyces cerevisiae]
Length = 254
Score = 210 bits (529), Expect = 1e-53
Identities = 114/245 (46%), Positives = 154/245 (62%), Gaps = 10/245 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F S + +GA K L+Y + +RG+V++I+HD GR AP+A
Sbjct: 1 MGRVIRNQRKGAGS-IFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F + E++ IA EG+ GQ IY G A + +GN LPL +PEGT V N+E
Sbjct: 60 KVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
PGD G RA G Y +++ D K V+LPSG K + + R IGV+AGGGR++KPL
Sbjct: 120 PGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPL 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+A++KY+ + WP RGV MN V+HP GG H H GK +T SR A G+K G IA
Sbjct: 180 LKAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIA 239
Query: 232 ARRTG 236
ARRTG
Sbjct: 240 ARRTG 244
>pir||S43423 ribosomal protein L2 - Halobacterium halobium (fragment)
Length = 208
Score = 209 bits (526), Expect = 3e-53
Identities = 114/213 (53%), Positives = 143/213 (66%), Gaps = 6/213 (2%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVA 59
MG+ + QRRG+G+ TFR+PSHR++ + + T+D L G V ++ HDP RTA VA
Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSH---KRTEDTDVLAGEVIDVEHDPARTA-VA 56
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
RV FE+ ++L++A EG+ VG I I A I GNTLPLA+IPEG V N+E PGDGG
Sbjct: 57 RVAFEDDDQRLVLASEGVGVGDTIEIESSATIEEGNTLPLAEIPEGVPVCNVESHPGDGG 116
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
K R G A +V+ E+D IV+L SGE K +P+CRATIGVVAGGGR EKP VKAG +
Sbjct: 117 KLPR-GRVNADLVTHERDATIVELASGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKH 175
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPG 212
+K KAR WP RGV MNAV+HPFG PG
Sbjct: 176 HKMKARGTKWPRVRGVAMNAVDHPFGAVAARPG 208
>sp|P46286|RL2_ARATH 60S RIBOSOMAL PROTEIN L2 >gi|1076399|pir||S54250 ribosomal protein
L2 - Arabidopsis thaliana >gi|798818|emb|CAA60445.1|
(X86765) 60S ribosomal protein L2 [Arabidopsis thaliana]
Length = 258
Score = 208 bits (523), Expect = 7e-53
Identities = 115/246 (46%), Positives = 150/246 (60%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G GS F+S +H +G K+ L++ + + L+GVV EI+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKGAGS-VFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F + ++L +A E +Y G A + +GN LPL IPEG V N+E
Sbjct: 60 RVTFRHPFRFKKQKELFVAAEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHH 119
Query: 115 PGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G RA G YA+V++ + D ++LPSG K RA IG VAGGGR EKP+
Sbjct: 120 VGDRGVLARASGDYAIVIAENPDSDTTRIKLPSGSKKIVPSGSRAMIGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG AY+KY+ + WP RGV MN V HP GG H H G +T R APPG+KVG IA
Sbjct: 180 LKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHSSTVRRDAPPGQKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>dbj|BAA78597.1| (AU066544) 60S ribosomal protein L2 [Chlamydomonas sp. HS-5]
Length = 257
Score = 208 bits (523), Expect = 7e-53
Identities = 113/246 (45%), Positives = 154/246 (61%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPL-NYTQDKTLRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G+GS + +HR +GA K+ + N ++ ++GVV +I+HD GR AP+A
Sbjct: 1 MGRVIRTQRKGRGSIFTSNNTHR-KGAAKHRLMDNSERNAYIKGVVSDIIHDSGRGAPLA 59
Query: 60 RVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F N ++L IA EG+ GQ +Y G A + +GN P+ +PEGT V +E
Sbjct: 60 KVTFRNPYHYKQDKELFIAAEGVYTGQFLYCGKKATLHVGNVKPIGTMPEGTVVCCLEEK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKDKVI--VQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G RA G Y ++V+ D + V+LPSG K CRAT+G VAGGGR EKP+
Sbjct: 120 AGDRGAIARASGDYCIIVAHNTDANVTRVKLPSGAKKILPSTCRATVGQVAGGGRTEKPM 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG++Y+KYKA+ WP RGV MN V HP GG H H G +T S+ A PG+KVG I
Sbjct: 180 LKAGRSYHKYKAKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVSKMAAPGQKVGLIG 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>pir||T18676 hypothetical protein B0250.1 - Caenorhabditis elegans
>gi|3873718|emb|CAB03792.1| (Z81453) predicted using
Genefinder~contains similarity to Pfam domain: PF00181
(Ribosomal Proteins L2), Score=441.6, E-value=2.3e-129,
N=1~cDNA EST EMBL:T01082 comes from this gene; cDNA EST
EMBL:T01701 comes from this gene~cDNA EST yk633d8.3
comes fr>
Length = 260
Score = 206 bits (519), Expect = 2e-52
Identities = 113/246 (45%), Positives = 154/246 (61%), Gaps = 10/246 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+G G F+S + +GA K PL+Y + ++G+V++I+HDPGR AP+A
Sbjct: 1 MGRRIRIQRKGAGG-IFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLA 59
Query: 60 RVRFENG-----MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+ F + ++ ++A EG+ GQ I+ G A I IGN +P+ +PEGT + N+E
Sbjct: 60 IIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENK 119
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G RA G YA V++ D K ++LPSG K RA IG+VAGGGR +KPL
Sbjct: 120 SGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPL 179
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG++Y+KYKA+ WP RGV MN V HP GG H H G P+T R A G+KVG IA
Sbjct: 180 LKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIA 239
Query: 232 ARRTGR 237
ARRTGR
Sbjct: 240 ARRTGR 245
>emb|CAC12392.1| (AL445067) probable 50S ribosomal protein L2 [Thermoplasma
acidophilum]
Length = 233
Score = 204 bits (514), Expect = 7e-52
Identities = 109/235 (46%), Positives = 149/235 (63%), Gaps = 9/235 (3%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVAR 60
MGK +I QRRG GS +RSPSHR VK++ V+++I+H PGR AP+
Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHITEVKHVDQGTY-------VIKDIIHAPGRNAPLLE 53
Query: 61 VRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGK 120
+ +G + IA G VGQ I G ++ G T LA IP+G+YVYNIE PGDGG+
Sbjct: 54 LMGSDGKKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGE 113
Query: 121 YVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYY 180
+ R+ GT+ALVVS + V ++LPSG ++ F+P CRAT+GVVA G + P++KAG +
Sbjct: 114 FCRSAGTFALVVSHGQ-HVTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVH 172
Query: 181 KYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARR 234
+++ + T RGV MNAVNHP GG H H G+P+T R APPGRKVG ++ +R
Sbjct: 173 YLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVGRLSPKR 227
>sp|P36593|RLK5_SCHPO 60S RIBOSOMAL PROTEIN K5 >gi|2130479|pir||S62587 ribosomal protein
L2 RPK5 - fission yeast (Schizosaccharomyces pombe)
>gi|7490000|pir||T40711 60s ribosomal protein - fission
yeast (Schizosaccharomyces pombe)
>gi|7490005|pir||T38134 60s ribosomal protein K5 -
fission yeast (Schizosaccharomyces pombe)
>gi|7490049|pir||T40134 60s ribosomal protein L8 or L2 -
fission yeast (Schizosaccharomyces pombe)
>gi|1067218|emb|CAA91962.1| (Z67999) 60s ribosomal
protein K5 [Schizosaccharomyces pombe]
>gi|2239237|emb|CAB10155.1| (Z97211) 60s ribosomal
protein L8 or L2 [Schizosaccharomyces pombe]
>gi|2879866|emb|CAA17007.1| (AL021816) 60s ribosomal
protein [Schizosaccharomyces pombe]
>gi|5441467|emb|CAB46697.1| (AL096796) 60s ribosomal
protein L8 [Schizosaccharomyces pombe]
Length = 253
Score = 203 bits (510), Expect = 2e-51
Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 11/245 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+ G F++ + +GA + L++ + +RGVV++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKSGG--IFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLA 58
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F N + +A EG+ GQ +Y G +A + +GN LP+ ++PEGT + N+E
Sbjct: 59 KVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEK 118
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G R+ G Y ++V + D K V+LPSG K + R +G+VAGGGR++KPL
Sbjct: 119 AGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPL 178
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+A++KY+ + WP RGV MN V+HP GG H H G TT R++ PG+KVG IA
Sbjct: 179 LKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIA 238
Query: 232 ARRTG 236
ARRTG
Sbjct: 239 ARRTG 243
>sp|P14067|RLD4_SCHPO 60S RIBOSOMAL PROTEIN KD4 >gi|71077|pir||R5ZPD4 ribosomal protein
L8.e, cytosolic (clone KD4) - fission yeast
(Schizosaccharomyces pombe) >gi|5063|emb|CAA34428.1|
(X16392) ribosomal protein KD4 (AA 1-253)
[Schizosaccharomyces pombe]
Length = 253
Score = 202 bits (509), Expect = 3e-51
Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 11/245 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+ G F++ + +GA + L++ + +RGVV++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKSGG--IFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLA 58
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F N + +A EG+ GQ +Y G +A + +GN LP+ ++PEGT + N+E
Sbjct: 59 KVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEK 118
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G R+ G Y ++V + D K V+LPSG K + R +G+VAGGGR++KPL
Sbjct: 119 AGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVLSSARGVVGIVAGGGRIDKPL 178
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+A++KY+ + WP RGV MN V+HP GG H H G TT R++ PG+KVG IA
Sbjct: 179 LKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIA 238
Query: 232 ARRTG 236
ARRTG
Sbjct: 239 ARRTG 243
>pir||C48328 ribosomal protein K37 - fission yeast (Schizosaccharomyces pombe)
Length = 253
Score = 201 bits (505), Expect = 8e-51
Identities = 104/245 (42%), Positives = 153/245 (62%), Gaps = 11/245 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+ G F++ + +GA + L++ + +RGVV++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKSGG--IFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLA 58
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F N + +A EG+ GQ +Y G +A + +GN LP+ ++PEGT + N+E
Sbjct: 59 KVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEK 118
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G R+ G Y ++V + D K V+LPSG K + R +G+VAGGGR++ PL
Sbjct: 119 AGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDNPL 178
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+A++KY+ + WP RGV MN V+HP GG H H G TT R++ PG+KVG IA
Sbjct: 179 LKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIA 238
Query: 232 ARRTG 236
ARRTG
Sbjct: 239 ARRTG 243
>pir||A48328 ribosomal protein K5 - fission yeast (Schizosaccharomyces pombe)
>gi|666109|emb|CAA35971.1| (X51659) 60S ribosomal
protein K5 [Schizosaccharomyces pombe]
Length = 253
Score = 201 bits (505), Expect = 8e-51
Identities = 105/245 (42%), Positives = 153/245 (61%), Gaps = 11/245 (4%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+ G F++ + +GA + L++ + +RGVV++I+HDPGR AP+A
Sbjct: 1 MGRVIRAQRKSGG--IFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLA 58
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
+V F N + +A EG+ GQ +Y G +A + +GN LP+ ++PEGT + N+E
Sbjct: 59 KVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEK 118
Query: 115 PGDGGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G R+ G Y + V + D K V+LPSG K + R +G+VAGGGR++KPL
Sbjct: 119 AGDRGALGRSSGNYVISVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPL 178
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIA 231
+KAG+A++KY+ + WP RGV MN V+HP GG H H G TT R++ PG+KVG IA
Sbjct: 179 LKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIA 238
Query: 232 ARRTG 236
ARRTG
Sbjct: 239 ARRTG 243
>gb|AAA92284.1| (U17360) ribosomal protein YL6b (L5) [Saccharomyces cerevisiae]
Length = 188
Score = 174 bits (437), Expect = 8e-43
Identities = 87/172 (50%), Positives = 112/172 (64%), Gaps = 3/172 (1%)
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
E++ IA EG+ GQ IY G A + +GN LPL +PEGT V N+E PGD G RA G
Sbjct: 7 EEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGN 66
Query: 128 YALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKAR 185
Y +++ D K V+LPSG K + + R IGV+AGGGR++KPL+KAG+A++KY+ +
Sbjct: 67 YVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLK 126
Query: 186 NRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTG 236
WP RGV MN V+HP GG H H GK +T SR A G+K G IAARRTG
Sbjct: 127 RNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTG 178
>sp|P13023|RL2_DICDI 60S RIBOSOMAL PROTEIN L2 >gi|71076|pir||R5DO2 ribosomal protein
L8.e - slime mold (Dictyostelium discoideum)
>gi|7355|emb|CAA33741.1| (X15710) ribosomal protein L2
(AA 1-237) [Dictyostelium discoideum]
Length = 237
Score = 163 bits (408), Expect = 2e-39
Identities = 85/210 (40%), Positives = 129/210 (60%), Gaps = 8/210 (3%)
Query: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
MG+ + QR+GK F + +H +G ++ L+Y + + ++GVV+EI+HDPGR AP+A
Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLA 60
Query: 60 RVRFENGME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGI 114
RV F+ + +L IAPEG+ GQ ++ G A + I + LP+ K+PEGT + N+E
Sbjct: 61 RVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIRHILPIGKLPEGTIICNVEEK 120
Query: 115 PGDGGKYVRAGGTYALVVSREKDK--VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
GD G R G YA +VS D+ + Q+ + + RA IG+VAGGGR++KP+
Sbjct: 121 LGDCGAVARCSGNYATIVSHNPDEGVTLYQITIRFKEERSSLARAMIGIVAGGGRIDKPM 180
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNH 202
+KAG+A++KY+ + WP RGV MN V H
Sbjct: 181 LKAGRAFHKYRVKKNNWPKVRGVAMNPVEH 210
>gb|AAF85800.1| (AF156372) 60S ribosomal protein L2 [Nicotiana tabacum]
Length = 174
Score = 161 bits (402), Expect = 1e-38
Identities = 82/155 (52%), Positives = 97/155 (61%), Gaps = 3/155 (1%)
Query: 86 GPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK--VIVQL 143
G A + +GN LPL IPEG V N+E GD G + R G YA+V+S D ++L
Sbjct: 5 GKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRIKL 64
Query: 144 PSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHP 203
PSG K CRA IG VAGGGR EKP++KAG AY+KY+ + WP RGV MN V HP
Sbjct: 65 PSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHP 124
Query: 204 FGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
GG H H G +T R APPG+KVG IAARRTGR
Sbjct: 125 HGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 159
>pir||R5BS2F ribosomal protein L2 - Bacillus stearothermophilus
Length = 275
Score = 139 bits (348), Expect = 2e-32
Identities = 94/226 (41%), Positives = 128/226 (56%), Gaps = 23/226 (10%)
Query: 6 IQQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRF 63
+++R G+ + + H+ G + Y +++ +DK + G V I +DP R+A +A + +
Sbjct: 36 LKKRAGRNNQGKITVRHQGGGHKRQYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINY 95
Query: 64 ENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVR 123
+G ++ IIAP+ L VG EI GPDA I IGN LPL IP GT V+NIE PG GG+ VR
Sbjct: 96 ADGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVR 155
Query: 124 AGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYK 183
A GT A V+ +E VIV+L SGE++ CRAT+G V G + LV GKA
Sbjct: 156 AAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEV---GNEQHELVNIGKA----- 207
Query: 184 ARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
R R+ PT RG MN V+HP GG E +AP GRK
Sbjct: 208 GRARWLGIRPTVRGSVMNPVDHPHGGGE----------GKAPIGRK 243
>dbj|BAA31210.1| (AB015722) ribosomal protein L2 [Bacillus stearothermophilus]
Length = 276
Score = 139 bits (348), Expect = 2e-32
Identities = 90/202 (44%), Positives = 117/202 (57%), Gaps = 22/202 (10%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + G V I +DP R+A +A + + +G ++ II P+ L VG EI GP
Sbjct: 61 QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIRPKNLKVGMEIMSGP 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
DA I IGN LPL IP GT V+NIE PG GG+ VRA GT ALV+ +E VIV+L SGE
Sbjct: 121 DADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSALVLGKEGKYVIVRLASGE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW---PTPRGVKMNAVNHPF 204
++ CRAT+G V G + LV GKA R R+ PT RG MN V+HP
Sbjct: 181 VRMILGKCRATVGEV---GNEQHELVNIGKA-----GRARWLGIRPTVRGSVMNPVDHPH 232
Query: 205 GGKEHHPGKPTTTSRRAPPGRK 226
GG E +AP GRK
Sbjct: 233 GGGE----------GKAPIGRK 244
>sp|P04257|RL2_BACST 50S RIBOSOMAL PROTEIN L2
Length = 276
Score = 139 bits (348), Expect = 2e-32
Identities = 94/226 (41%), Positives = 128/226 (56%), Gaps = 23/226 (10%)
Query: 6 IQQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRF 63
+++R G+ + + H+ G + Y +++ +DK + G V I +DP R+A +A + +
Sbjct: 37 LKKRAGRNNQGKITVRHQGGGHKRQYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINY 96
Query: 64 ENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVR 123
+G ++ IIAP+ L VG EI GPDA I IGN LPL IP GT V+NIE PG GG+ VR
Sbjct: 97 ADGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVR 156
Query: 124 AGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYK 183
A GT A V+ +E VIV+L SGE++ CRAT+G V G + LV GKA
Sbjct: 157 AAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEV---GNEQHELVNIGKA----- 208
Query: 184 ARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
R R+ PT RG MN V+HP GG E +AP GRK
Sbjct: 209 GRARWLGIRPTVRGSVMNPVDHPHGGGE----------GKAPIGRK 244
>sp|Q9Z9L1|RL2_BACHD 50S RIBOSOMAL PROTEIN L2 >gi|11276683|pir||T44386 ribosomal protein
L2 [imported] - Bacillus halodurans
>gi|4512407|dbj|BAA75274.1| (AB017508) rplB homologue
(identity of 86% to B. subtilis ) [Bacillus halodurans]
>gi|10172749|dbj|BAB03856.1| (AP001507) ribosomal
protein L2 (BL2) [Bacillus halodurans]
Length = 276
Score = 136 bits (339), Expect = 2e-31
Identities = 89/221 (40%), Positives = 119/221 (53%), Gaps = 22/221 (9%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R +G T R + + I +D + G V I +DP R+A +A + + +G +
Sbjct: 43 RNNQGKMTVRHQGGGHKRQYRIIDFKRNKDG-IPGRVATIEYDPNRSANIALINYVDGEK 101
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+AP+GL VG I GP+A I +GN LPL IP GT ++NIE PG GG+ VR+ G
Sbjct: 102 RYILAPKGLKVGMTIESGPEADIKVGNALPLKNIPVGTVIHNIELKPGKGGQLVRSAGAE 161
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
A ++ +E D V+V+L SGE + CRATIG V G LE LV GKA R+R+
Sbjct: 162 AQLLGKEGDYVLVRLNSGETRYILATCRATIGQV---GNLEHELVNIGKA-----GRSRW 213
Query: 189 W---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
PT RG MN +HP GG E RAP GRK
Sbjct: 214 LGKRPTVRGSAMNPNDHPHGGGE----------GRAPIGRK 244
>gi|11466368 ribosomal protein L2 [Mesostigma viride]
>gi|7259511|gb|AAF43812.1|AF166114_24 (AF166114)
ribosomal protein L2 [Mesostigma viride]
Length = 276
Score = 136 bits (339), Expect = 2e-31
Identities = 83/213 (38%), Positives = 119/213 (54%), Gaps = 11/213 (5%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPL-NYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGM 67
R +G T R HR G + L ++T++K + V I +DP R +A + ++NG+
Sbjct: 43 RNNRGIITIR---HRGGGHKRLCRLIDFTREKNIPATVASIEYDPNRNCRIALLYYKNGI 99
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ II P GL VG+EI +AP+++GN+LPL KIP GT ++NIE PG GG+ RA G
Sbjct: 100 KRYIIHPRGLSVGKEIVSSVEAPLSVGNSLPLNKIPLGTGIHNIELSPGQGGQLARAAGA 159
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E V V+LPSGE++ C ATIG V + KAG+ + K
Sbjct: 160 VAQLIAKEGKFVTVRLPSGEVRLILKECWATIGQVGNVDANNITIGKAGRTRWLGKR--- 216
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHP--GKPTTTS 218
P RGV MN V+HP GG E G+P S
Sbjct: 217 --PVVRGVVMNPVDHPHGGGEGRSPIGRPKPVS 247
>emb|CAA38737.1| (X54994) ribosomal protein L2 [Bacillus stearothermophilus]
Length = 196
Score = 135 bits (336), Expect = 6e-31
Identities = 85/182 (46%), Positives = 106/182 (57%), Gaps = 21/182 (11%)
Query: 48 IMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTY 107
I +DP R+A +A + + +G ++ IIAP+ L VG EI GPDA I IGN LPL IP GT
Sbjct: 1 IEYDPNRSANIALINYADGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTL 60
Query: 108 VYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGR 167
V+NIE PG GG+ VRA GT A V+ +E VIV+L SGE++ CRAT+G V G
Sbjct: 61 VHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEV---GN 117
Query: 168 LEKPLVKAGKAYYKYKARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPG 224
+ LV GKA R R+ PT RG MN V+HP GG E +AP G
Sbjct: 118 EQHELVNIGKA-----GRARWLGIRPTVRGSVMNPVDHPHGGGE----------GKAPIG 162
Query: 225 RK 226
RK
Sbjct: 163 RK 164
>sp|P02387|RL2_ECOLI 50S RIBOSOMAL PROTEIN L2 >gi|71080|pir||R5EC2 ribosomal protein L2
[validated] - Escherichia coli >gi|42829|emb|CAA26463.1|
(X02613) ribosomal protein L2 (rplB) (aa 1-273)
[Escherichia coli] >gi|606251|gb|AAA58114.1| (U18997)
50S ribosomal subunit protein L2 [Escherichia coli]
>gi|1789713|gb|AAC76342.1| (AE000408) 50S ribosomal
subunit protein L2 [Escherichia coli K12]
Length = 273
Score = 135 bits (336), Expect = 6e-31
Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 14/237 (5%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R G T R + A + + +D + VVE + +DP R+A +A V +++G
Sbjct: 43 RNNNGRITTRHIGGGHKQAYRIVDFKRNKDG-IPAVVERLEYDPNRSANIALVLYKDGER 101
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+AP+GL G +I G DA I GNTLP+ IP G+ V+N+E PG GG+ R+ GTY
Sbjct: 102 RYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTY 161
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
+V+R+ V ++L SGE++ +CRAT+G V + + L KAG A ++
Sbjct: 162 VQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWR-----GV 216
Query: 189 WPTPRGVKMNAVNHPFGGKE-----HHPGKP---TTTSRRAPPGRKVGHIAARRTGR 237
PT RG MN V+HP GG E HP P T ++ ++ RR +
Sbjct: 217 RPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK 273
>prf||0901234A protein L12 [Escherichia coli]
Length = 272
Score = 134 bits (335), Expect = 7e-31
Identities = 82/237 (34%), Positives = 123/237 (51%), Gaps = 14/237 (5%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R G T R + A + + +D + VVE + +DP R+A +A V +++G
Sbjct: 42 RNNNGRITTRHIGGGHKQAYRIVDFKRNKDG-IPAVVERLEYDPNRSANIALVLYKDGER 100
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+AP+GL G +I G DA I GNTLP+ IP G+ V+N+E PG GG+ R+ GTY
Sbjct: 101 RYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTY 160
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
+V+R+ V ++L SGE++ +CRAT+G V + + L KAG A ++
Sbjct: 161 VQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWR-----GV 215
Query: 189 WPTPRGVKMNAVNHPFGGKE-----HHPGKP---TTTSRRAPPGRKVGHIAARRTGR 237
PT RG MN V+HP GG E HP P T ++ ++ RR +
Sbjct: 216 RPTVRGTAMNPVDHPGGGHEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK 272
>sp|P38510|RL2_THEMA 50S RIBOSOMAL PROTEIN L2 >gi|7440631|pir||A72250 ribosomal protein
L2 - Thermotoga maritima (strain MSB8)
>gi|4982061|gb|AAD36563.1|AE001798_28 (AE001798)
ribosomal protein L2 [Thermotoga maritima]
Length = 276
Score = 134 bits (335), Expect = 7e-31
Identities = 71/172 (41%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 48 IMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTY 107
I +DP R+A +A + + +G ++ I+AP+G+ VG + GPDA I GN LPL KIP GT
Sbjct: 82 IEYDPNRSARIALLLYADGEKRYILAPKGVNVGDTLMSGPDAEIRPGNALPLEKIPVGTL 141
Query: 108 VYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGR 167
V+N+E PG GG+ RA GTY ++++E + ++++PSGEL+ + C AT+GVV
Sbjct: 142 VHNVEFTPGKGGQIARAAGTYCQIMAKEGNYALLRMPSGELRKVHIKCYATVGVVGNEDH 201
Query: 168 LEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFG-----GKEHHPGKP 214
+ KAG+ + + P RGV MN V+HP G GK HHP P
Sbjct: 202 KNEVHGKAGRVRWLGRR-----PHVRGVAMNPVDHPHGGGEGRGKGHHPTSP 248
>pir||S40191 ribosomal protein L2 - Thermotoga maritima
>gi|437926|emb|CAA79780.1| (Z21677) ribosomal protein L2
[Thermotoga maritima]
Length = 276
Score = 134 bits (334), Expect = 1e-30
Identities = 71/172 (41%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 48 IMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTY 107
I +DP R+A +A + + +G ++ I+AP+G+ VG + GPDA I GN LPL KIP GT
Sbjct: 82 IEYDPNRSARIALLLYADGEKRYILAPKGVNVGDTLMSGPDAEIRPGNALPLEKIPVGTL 141
Query: 108 VYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGR 167
V+N+E PG GG+ RA GTY +++ E + ++++PSGEL+ + C AT+GVV
Sbjct: 142 VHNVEFTPGKGGQIARAAGTYCQIMANEGNYALLRMPSGELRKVHIKCYATVGVVGNEDH 201
Query: 168 LEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFG-----GKEHHPGKP 214
++ KAG+ + + P RGV MN V+HP G GK HHP P
Sbjct: 202 KKEVHGKAGRVRWLGRR-----PHVRGVAMNPVDHPHGGGEGRGKGHHPTSP 248
>sp|P55835|RL2_ACTAC 50S RIBOSOMAL PROTEIN L2 >gi|1841325|dbj|BAA10950.1| (D64071)
ribosomal protein L2 [Actinobacillus
actinomycetemcomitans]
Length = 273
Score = 134 bits (334), Expect = 1e-30
Identities = 75/203 (36%), Positives = 112/203 (54%), Gaps = 13/203 (6%)
Query: 43 GVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKI 102
GVVE + +DP R+A +A V +++G + I+AP+GL G +I G API +GN LP+ I
Sbjct: 76 GVVERLEYDPNRSANIALVLYKDGERRYILAPKGLAAGDQIQAGAHAPIKVGNALPMRNI 135
Query: 103 PEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVV 162
P G+ V+N+E PG GG+ R+ G+Y +++RE + V ++L SGE++ C ATIG V
Sbjct: 136 PVGSTVHNVELKPGKGGQIARSAGSYVQIIAREGNYVTLRLRSGEMRKVLAECSATIGEV 195
Query: 163 AGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE-----HHPGKP--- 214
+ + L KAG ++ PT RG MN V+HP GG E HP P
Sbjct: 196 GNSEHMLRVLGKAGANRWR-----GVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGV 250
Query: 215 TTTSRRAPPGRKVGHIAARRTGR 237
T ++ ++ RR G+
Sbjct: 251 QTKGKKTRHNKRTDKYIVRRRGK 273
>gi|7524931 50S ribosomal protein L2 [Chlorella vulgaris]
>gi|3024535|sp|P56367|RK2_CHLVU CHLOROPLAST 50S
RIBOSOMAL PROTEIN L2 >gi|7440617|pir||T07361 ribosomal
protein L2 - Chlorella vulgaris chloroplast
>gi|2224525|dbj|BAA58009.1| (AB001684) 50S ribosomal
protein L2 [Chlorella vulgaris]
Length = 275
Score = 134 bits (333), Expect = 1e-30
Identities = 87/218 (39%), Positives = 120/218 (54%), Gaps = 17/218 (7%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ + + HR G + Y +++ + K + V I +DP R A +A V +++G
Sbjct: 41 KGRNNRGIITSRHRGGGHKRLYREIDFARAKVNVPAKVAYIEYDPNRNARIALVNYQDGE 100
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
+K I+ P GL VGQ I P+A IAIGN LPL KIP GT V+NIE PG GG+ VRA GT
Sbjct: 101 KKYILHPVGLQVGQTIIASPEASIAIGNCLPLVKIPLGTEVHNIELQPGSGGQLVRAAGT 160
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A +V++E ++LPSGE++ + NC ATIG V L KAG++ + +
Sbjct: 161 VAQIVAKEGTWASLRLPSGEVRLVSQNCWATIGRVGNIDAFNLTLGKAGRSRWLGRR--- 217
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGR 225
P RG MN V+HP GG E RAP GR
Sbjct: 218 --PHVRGSAMNPVDHPHGGGE----------GRAPIGR 243
>sp|P11255|RL2_YERPS 50S RIBOSOMAL PROTEIN L2 >gi|71081|pir||R5EB2Y ribosomal protein L2
- Yersinia pseudotuberculosis >gi|48648|emb|CAA32545.1|
(X14363) ribosomal protein L2 (AA 1 - 274) [Yersinia
pseudotuberculosis]
Length = 274
Score = 133 bits (332), Expect = 2e-30
Identities = 74/203 (36%), Positives = 112/203 (54%), Gaps = 13/203 (6%)
Query: 44 VVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIP 103
VVE + +DP R+A +A V +++G + I+AP+GL G +I G DA I GNTLP+ IP
Sbjct: 77 VVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIP 136
Query: 104 EGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVA 163
G+ V+N+E PG GG+ R+ G Y +V+R+ V ++L SGE++ +CRAT+G V
Sbjct: 137 VGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGSYVTLRLRSGEMRKVQADCRATLGEVG 196
Query: 164 GGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE-----HHPGKP---T 215
+ + L KAG + ++ PT RG MN V+HP GG E HP P
Sbjct: 197 NAEHMLRVLGKAGASRWR-----GIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQ 251
Query: 216 TTSRRAPPGRKVGHIAARRTGRR 238
T ++ ++ RR ++
Sbjct: 252 TKGKKTRSNKRTDKFIVRRRSKK 274
>sp|P42919|RL2_BACSU 50S RIBOSOMAL PROTEIN L2 (BL2) >gi|7440626|pir||F69694 ribosomal
protein L2 (BL2) rplB - Bacillus subtilis
>gi|786156|dbj|BAA08834.1| (D50302) Ribosomal Protein L2
[Bacillus subtilis] >gi|2632386|emb|CAB11895.1| (Z99104)
ribosomal protein L2 (BL2) [Bacillus subtilis]
Length = 277
Score = 133 bits (331), Expect = 2e-30
Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 22/202 (10%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + G V + +DP R+A +A + + +G ++ I+AP+G+ VG EI GP
Sbjct: 61 QYRVIDFKRDKDGIPGRVATVEYDPNRSANIALINYADGEKRYILAPKGIQVGTEIMSGP 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
+A I +GN LPL IP GT V+NIE PG GG+ VR+ GT A V+ +E V+V+L SGE
Sbjct: 121 EADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVLGKEGKYVLVRLNSGE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF---WPTPRGVKMNAVNHPF 204
++ CRA+IG V G + L+ GKA R+R+ PT RG MN +HP
Sbjct: 181 VRMILSACRASIGQV---GNEQHELINIGKA-----GRSRWKGIRPTVRGSVMNPNDHPH 232
Query: 205 GGKEHHPGKPTTTSRRAPPGRK 226
GG E RAP GRK
Sbjct: 233 GGGE----------GRAPIGRK 244
>sp|P57588|RL2_BUCAI 50S RIBOSOMAL PROTEIN L2 >gi|10039180|dbj|BAB13214.1| (AP001119)
50S ribosomal protein L2 [Buchnera sp. APS]
Length = 273
Score = 133 bits (331), Expect = 2e-30
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 3 KSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVR 62
KS R G T R + A + + +D + VE +DP R++ +A +
Sbjct: 37 KSKSGGRNNNGRITTRHIGGGHKRAYRIVDFKRNKDD-IGATVERFEYDPNRSSNIALIL 95
Query: 63 FENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYV 122
+++G K I+AP+G+ +G I G API GNTLPL IP GT+V+N+E PG GG+
Sbjct: 96 YKDGERKYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIA 155
Query: 123 RAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKY 182
R+ G+Y +V+ +++ ++L SGE++ NCRATIG V + K L KAG + +
Sbjct: 156 RSAGSYVQLVAFDEEYATLRLRSGEMRKTQSNCRATIGEVGNSEHMLKVLGKAGASRW-- 213
Query: 183 KARNRFWPTPRGVKMNAVNHPFGGKE-----HHPGKPTTTSRRAPPGRK 226
PT RG MN V+HP GG E HP P + RK
Sbjct: 214 ---IGIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGIQTKGKKTRK 259
>gi|11467342 ribosomal protein L2 [Cyanophora paradoxa]
>gi|132852|sp|P15764|RK2_CYAPA CYANELLE 50S RIBOSOMAL
PROTEIN L2 >gi|71084|pir||R5KT2 ribosomal protein L2,
cyanelle - Cyanophora paradoxa cyanelle
>gi|11404|emb|CAA35537.1| (X17498) L2 ribosomal protein
(AA 1-275) [Cyanophora paradoxa]
>gi|1016143|gb|AAA81230.1| (U30821) ribosomal protein L2
[Cyanophora paradoxa]
Length = 275
Score = 132 bits (330), Expect = 3e-30
Identities = 83/226 (36%), Positives = 129/226 (56%), Gaps = 23/226 (10%)
Query: 5 LIQQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVR 62
L +++G+ + + +H+ G+ + Y +++ +D K + V I +DP R A +A +
Sbjct: 36 LKHRKKGRNNRGIITTAHKGGGSKRLYRIIDFKRDLKLVPAKVAAIEYDPNRNARIALLH 95
Query: 63 FENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYV 122
++NG + I+ GL VG +Y GP+API +GN+LPL++IP T ++NIE PG GG+ V
Sbjct: 96 YQNGEKGYILHARGLAVGNMVYSGPNAPIEVGNSLPLSEIPLATEIHNIELTPGKGGQLV 155
Query: 123 RAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKY 182
R+ G+ A ++++E + V ++LPSGE++ C ATIG + G E + GKA
Sbjct: 156 RSAGSSAQLLAKEGNYVTLRLPSGEMRFVRKECYATIGQI---GNAEISNISIGKA---- 208
Query: 183 KARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGR 225
RNR+ PT RGV N V+HP GG E RAP GR
Sbjct: 209 -GRNRWLGIRPTVRGVVKNPVDHPHGGGE----------GRAPIGR 243
>gb|AAC45959.1| (U43929) L2 [Bacillus subtilis]
Length = 277
Score = 132 bits (330), Expect = 3e-30
Identities = 82/202 (40%), Positives = 118/202 (57%), Gaps = 22/202 (10%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + G V + +DP R+A +A + + +G ++ I+AP+G+ VG E+ GP
Sbjct: 61 QYRVIDFKRDKDGIPGRVATVEYDPNRSANIALINYADGEKRYILAPKGIQVGTEVMSGP 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
+A I +GN LPL IP GT V+NIE PG GG+ VR+ GT A V+ +E V+V+L SGE
Sbjct: 121 EADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVLGKEGKYVLVRLNSGE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF---WPTPRGVKMNAVNHPF 204
++ CRA+IG V G + L+ GKA R+R+ PT RG MN +HP
Sbjct: 181 VRMILSACRASIGQV---GNEQHELINIGKA-----GRSRWKGIRPTVRGSVMNPNDHPH 232
Query: 205 GGKEHHPGKPTTTSRRAPPGRK 226
GG E RAP GRK
Sbjct: 233 GGGE----------GRAPIGRK 244
>sp|P49239|RL2_YEREN 50S RIBOSOMAL PROTEIN L2 >gi|1032300|gb|AAC43513.1| (U11251)
ribosomal protein L2 [Yersinia enterocolitica]
Length = 274
Score = 132 bits (329), Expect = 4e-30
Identities = 74/203 (36%), Positives = 112/203 (54%), Gaps = 13/203 (6%)
Query: 44 VVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIP 103
VVE + +DP R+A +A V +++G + I+AP+GL G +I G DA I GNTLP+ IP
Sbjct: 77 VVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIP 136
Query: 104 EGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVA 163
G+ V+N+E PG GG+ R+ G Y +V+R+ V ++L SGE++ +CRAT+G V
Sbjct: 137 VGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGSYVTLRLRSGEMRKVLADCRATLGEVG 196
Query: 164 GGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE-----HHPGKP---T 215
+ + L KAG + ++ PT RG MN V+HP GG E HP P
Sbjct: 197 NAEHMLRVLGKAGASRWR-----GIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQ 251
Query: 216 TTSRRAPPGRKVGHIAARRTGRR 238
T ++ ++ RR ++
Sbjct: 252 TKGKKTRSNKRTDKFIVRRRSKK 274
>emb|CAB53116.1| (AJ245645) 50S ribosomal protein L2 [Prototheca wickerhamii]
Length = 273
Score = 132 bits (329), Expect = 4e-30
Identities = 83/209 (39%), Positives = 118/209 (55%), Gaps = 10/209 (4%)
Query: 2 GKSLIQQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
G S Q R KG T R HR G + Y +++ ++K +V+ I +DP RTA +A
Sbjct: 36 GWSRAQGRNNKGRITTR---HRGGGHKRLYREIDFIRNKIGTSAIVKSIEYDPNRTARIA 92
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
V +++G ++ I++P GL VG+ + P+API +GNTLPL IP GT V+N+E PG GG
Sbjct: 93 LVCYKDGEKRYILSPTGLKVGEMVIASPNAPITVGNTLPLYNIPLGTSVHNVELQPGAGG 152
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
+ VR+ G+ A +V++E + LPSGE + C AT+G V G L+ + GKA
Sbjct: 153 QLVRSAGSVAQIVAKEGQWATLHLPSGEYRLIPQKCWATVGRV---GNLDNSNITLGKAG 209
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
R P RG MN V+HP GG E
Sbjct: 210 RSRWLSQR--PHVRGSAMNPVDHPHGGGE 236
>gi|11466745 ORF203 [Marchantia polymorpha] >gi|132858|sp|P06378|RK2_MARPO
CHLOROPLAST 50S RIBOSOMAL PROTEIN L2
>gi|71085|pir||R5LV2 ribosomal protein L2 - liverwort
(Marchantia polymorpha) chloroplast
>gi|456520|emb|CAA28127.1| (X04465) ORF203 [Marchantia
polymorpha]
Length = 277
Score = 132 bits (328), Expect = 5e-30
Identities = 82/237 (34%), Positives = 129/237 (53%), Gaps = 22/237 (9%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENG 66
++G+ + + HR G + Y +++ ++K + G ++ I +DP R + + +E+G
Sbjct: 40 KKGRNNRGIITSQHRGGGHKRLYRKIDFQRNKKYITGKIKTIEYDPNRNTYICLINYEDG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
++ I+ P G+ + I +API IGNTLPL +P GT ++NIE PG GG+ VRA G
Sbjct: 100 EKRYILYPRGIKLDDTIISSEEAPILIGNTLPLTNMPLGTAIHNIEITPGKGGQLVRAAG 159
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
T A ++++E V ++LPSGE++ + C ATIG + G ++ ++ GKA K
Sbjct: 160 TVAKIIAKEGQLVTLRLPSGEIRLISQKCLATIGQI---GNVDVNNLRIGKAGSKRWLGK 216
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIAARRTGRR 238
R P RGV MN ++HP GG E RAP GRK GH A + R+
Sbjct: 217 R--PKVRGVVMNPIDHPHGGGE----------GRAPIGRKKPLTPWGHPALGKRSRK 261
>sp|P44343|RL2_HAEIN 50S RIBOSOMAL PROTEIN L2 >gi|1075239|pir||H64092 ribosomal protein
L2 - Haemophilus influenzae (strain Rd KW20)
>gi|1573790|gb|AAC22439.1| (U32761) ribosomal protein L2
(rpL2) [Haemophilus influenzae Rd]
Length = 273
Score = 131 bits (327), Expect = 6e-30
Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 13/202 (6%)
Query: 44 VVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIP 103
VVE + +DP R+A +A V +++G + I+AP+GL VG +I G ++PI +GN+LP+ IP
Sbjct: 77 VVERLEYDPNRSANIALVLYKDGERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIP 136
Query: 104 EGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVA 163
G+ V+N+E PG GG+ R+ G Y +++RE + V ++L SGE++ C ATIG V
Sbjct: 137 VGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLRSGEMRKVLAECVATIGEVG 196
Query: 164 GGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE-----HHPGKP---T 215
+ + L KAG ++ PT RG MN V+HP GG E HP P
Sbjct: 197 NSEHMLRVLGKAGANRWR-----GIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQ 251
Query: 216 TTSRRAPPGRKVGHIAARRTGR 237
T ++ ++ RR G+
Sbjct: 252 TKGKKTRHNKRTDKYIVRRRGK 273
>sp|O62954|RK2_PICAB CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|7440635|pir||T11810
ribosomal protein L2 - Norway spruce chloroplast
>gi|2959586|gb|AAC95500.1| (U92462) ribosomal protein L2
[Picea abies]
Length = 275
Score = 131 bits (327), Expect = 6e-30
Identities = 83/233 (35%), Positives = 124/233 (52%), Gaps = 15/233 (6%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENG 66
R G+G T R HR G + Y +++ +DK + G + I +DP R+A + +V ++NG
Sbjct: 43 RNGRGIITAR---HRGGGHKRLYRQIDFRRDKEHISGKIVTIEYDPNRSAYICKVHYKNG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
+ I+ P G+++G I GP API+IGN LPL +P GT ++NIE G GG+ RA G
Sbjct: 100 DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAG 159
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
A ++++E ++LPSGE++ + NC ATIG V + KAG + K
Sbjct: 160 AVAELIAKEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAGAKRWLGKRSE 219
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
RGV MN V+HP GG G+ T R P G+ A + R++
Sbjct: 220 -----VRGVAMNPVDHPHGG-----GEGRTPIGRKKPVTPWGYSALGKKSRKR 262
>gb|AAC95308.1| (AF050665) ribosomal protein L2 [Spirogyra maxima]
Length = 277
Score = 131 bits (325), Expect = 1e-29
Identities = 83/225 (36%), Positives = 121/225 (52%), Gaps = 17/225 (7%)
Query: 4 SLIQQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARV 61
S + + +G+ + + HR G + Y +++ +DK + G + I +DP R A +
Sbjct: 35 SKVSKHQGRNNRGVITSRHRGGGHKRLYRDIDFRRDKQGVNGTILTIEYDPNRNARICLT 94
Query: 62 RFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
+E+G ++ I+ G+++G +I GPDAPI GN LPL IP GT V+NIE PG GG+
Sbjct: 95 SYEDGEKRYILHSRGVMIGNQILSGPDAPIVPGNALPLTNIPLGTSVHNIELQPGKGGQI 154
Query: 122 VRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYK 181
VRA GT A ++++ ++LPSGE++ C AT+G V G ++ K GKA K
Sbjct: 155 VRAAGTVAQIIAKAGQLATLRLPSGEIRLVPQACFATVGQV---GNIDANNRKLGKAGAK 211
Query: 182 YKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
R P RGV MNA + P GG E RAP GRK
Sbjct: 212 RWLGKR--PKVRGVVMNAADQPHGGGE----------GRAPIGRK 244
>gi|7524696 ribosomal protein L2 [Pinus thunbergii] >gi|7440632|pir||T07531
ribosomal protein L2 - Japanese black pine chloroplast
(fragment) >gi|2626947|dbj|BAA23474.1| (D17510)
ribosomal protein L2 [Pinus thunbergii]
Length = 276
Score = 129 bits (322), Expect = 2e-29
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 15/233 (6%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENG 66
R G+G T R HR G + Y +++ ++K + G + I +DP R+A + +V ++NG
Sbjct: 44 RNGRGIITAR---HRGGGHKRLYRQIDFRRNKEHISGEIVTIEYDPNRSAYICKVHYKNG 100
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
+ I+ P G+++G I GP API+IGN LPL +P GT ++NIE G GG+ RA G
Sbjct: 101 DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAG 160
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
A ++++E ++LPSGE++ + NC ATIG V + KAG + K
Sbjct: 161 AVAELIAKEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAGAKRWLGKRSE 220
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
RGV MN V+HP GG G+ T R P G+ A + R++
Sbjct: 221 -----VRGVAMNPVDHPHGG-----GEGRTPIGRKKPVTPWGYSALGKKSRKR 263
>pir||C82059 ribosomal protein L2 VC2593 [imported] - Vibrio cholerae (group O1
strain N16961) >gi|9657180|gb|AAF95734.1| (AE004326)
ribosomal protein L2 [Vibrio cholerae]
Length = 274
Score = 128 bits (319), Expect = 5e-29
Identities = 84/236 (35%), Positives = 119/236 (49%), Gaps = 16/236 (6%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R G T R + + + T+D + VE + +DP R+A +A V + +G
Sbjct: 43 RNNNGRITVRHIGGGHKQHYRLVDFKRTKDG-IPAKVERLEYDPNRSANIALVLYADGER 101
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ IIAP+GL G I GPDAPI GN +P+ IP G+ ++N+E PG G + R+ G Y
Sbjct: 102 RYIIAPKGLQAGDVIQSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAGAY 161
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
A +V+R+ V ++L SGE++ RATIG V + + L KAG A ++
Sbjct: 162 AQLVARDGAYVTLRLRSGEMRKVLSEGRATIGEVGNAEHMLRELGKAGAARWR-----GV 216
Query: 189 WPTPRGVKMNAVNHPFGGKE------HHP----GKPTTTSRRAPPGRKVGHIAARR 234
PT RGV MN V+HP GG E HP G PT + R +I RR
Sbjct: 217 RPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGVPTKGYKTRSNKRTDKYIVRRR 272
>gb|AAF82677.1| (AF188855) ribosomal protein L2 [Nymphaea odorata]
Length = 201
Score = 127 bits (317), Expect = 9e-29
Identities = 70/189 (37%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 23 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGANQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>gi|11497599 ribosomal protein l12 [Spinacia oleracea]
>gi|6682317|emb|CAB56543.3| (AJ244023) chloroplast
ribosomal protein L2 [Spinacia oleracea]
>gi|7636180|emb|CAB88803.1| (AJ400848) ribosomal protein
l12 [Spinacia oleracea]
Length = 272
Score = 127 bits (317), Expect = 9e-29
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 24/242 (9%)
Query: 7 QQRRGKGSPTFRSPSHRFRGAVK---YIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVR 62
Q+R GKG + R RG Y +++ + +K + G + I +DP R A + +
Sbjct: 32 QRRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGKIVTIEYDPNRNAYICLIH 91
Query: 63 FENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYV 122
+ +G ++ I+ P G ++G I G + PI +GN LPL +P GT ++NIE G GG+
Sbjct: 92 YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 151
Query: 123 RAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKY 182
RA G A ++++E ++LPSGE++ + NC AT+G V G +K L +AG +
Sbjct: 152 RAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKRLGRAGSKRWLG 211
Query: 183 KARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIAARRTGR 237
K P RGV MN V+HP GG E RAP GRK G+ A R R
Sbjct: 212 KR-----PVVRGVVMNPVDHPHGGGE----------GRAPIGRKSPTTPWGYPALGRRSR 256
Query: 238 RK 239
++
Sbjct: 257 KR 258
>gi|11467468 50S ribosomal protein L2 [Odontella sinensis]
>gi|1350640|sp|P49545|RK2_ODOSI CHLOROPLAST 50S
RIBOSOMAL PROTEIN L2 >gi|7440622|pir||S78273 ribosomal
protein L2, chloroplast - Odontella sinensis chloroplast
>gi|1185163|emb|CAA91646.1| (Z67753) 50S ribosomal
protein L2 [Odontella sinensis]
Length = 275
Score = 127 bits (316), Expect = 1e-28
Identities = 90/231 (38%), Positives = 124/231 (52%), Gaps = 26/231 (11%)
Query: 3 KSLIQQR-RGKGSPTFRSPSHRFRGAV---KYIPLNYTQDK-TLRGVVEEIMHDPGRTAP 57
KSLIQ+ R KG + R RG +Y +++ + K + GVV I +DP R A
Sbjct: 31 KSLIQKNHRSKGRNNRGVITIRHRGGGHKRRYRIIDFGRKKHNVEGVVAAIEYDPNRNAR 90
Query: 58 VARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGD 117
+A + + +G ++ I+ P L VG + G +A + IGN LPL KIP G V+NIE IP
Sbjct: 91 IALLHYTDGEKRYILHPNNLNVGDRVVSGMEAELVIGNALPLEKIPLGASVHNIELIPNR 150
Query: 118 GGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGK 177
GG+ VRA GT A ++++E D V ++LPS E++ C ATIG V+ LV++GK
Sbjct: 151 GGQIVRAAGTSAKILAKEGDYVTLRLPSKEIRLIRKECFATIGEVSNNDAF---LVQSGK 207
Query: 178 AYYKYKARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGR 225
A R R+ PT RG MN +HP GG E RAP GR
Sbjct: 208 A-----GRTRWLGKRPTVRGSVMNPCDHPHGGGE----------GRAPIGR 243
>sp|O83222|RL2_TREPA 50S RIBOSOMAL PROTEIN L2 >gi|7440620|pir||B71355 probable ribosomal
protein L2 (rplB) - syphilis spirochete
>gi|3322456|gb|AAC65177.1| (AE001202) ribosomal protein
L2 (rplB) [Treponema pallidum]
Length = 273
Score = 127 bits (316), Expect = 1e-28
Identities = 73/202 (36%), Positives = 115/202 (56%), Gaps = 7/202 (3%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENG 66
+ G+G+ S HR G + Y +++ +D + G V+ I +DP R+ +A V + NG
Sbjct: 40 KAGRGAGGRISVRHRGGGHKRRYRDIDFKRDLHDIPGTVKTIEYDPNRSVNIALVFYANG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
++ I+AP+GL VGQ++ G P+ N LPL IP G V+N+E G GG+ R+ G
Sbjct: 100 QKRYILAPKGLKVGQQVVSGEKVPLEPANALPLGVIPVGFTVHNVELTIGKGGQIARSAG 159
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
T A++ +++ V+++LPSGE + + C ATIG + + L KAG+A ++
Sbjct: 160 TRAVIAAKDGGYVMLRLPSGEARLVHRRCYATIGELGNEDHMNTALGKAGRARWR----- 214
Query: 187 RFWPTPRGVKMNAVNHPFGGKE 208
PT RG+ MN V+HP GG E
Sbjct: 215 GVRPTVRGMAMNPVDHPLGGGE 236
>sp|P27107|RK2_SINAL CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|12214|emb|CAA46568.1|
(X65615) ribosomal protein L2 [Sinapis alba]
Length = 274
Score = 127 bits (315), Expect = 2e-28
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 26/239 (10%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENG 66
R +G T R HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 41 RNARGIITVR---HRGGGHKRLYRKIDFRRNTKDIYGRIVTIEYDPNRNAYICLIHYGDG 97
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
++ I+ P G ++G I G + PI +GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 98 EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAG 157
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 158 AVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKR-- 215
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E RAP GRK G+ A RRT +RK
Sbjct: 216 ---PVVRGVVMNPVDHPHGGGE----------GRAPIGRKKPVTPWGYPALGRRTRKRK 261
>sp|P95052|RL2_MYCTU 50S RIBOSOMAL PROTEIN L2 >gi|7440630|pir||C70642 probable ribosomal
protein L2 rplB - Mycobacterium tuberculosis (strain
H37RV) >gi|1806172|emb|CAB06467.1| (Z84395) rplB
[Mycobacterium tuberculosis]
Length = 280
Score = 127 bits (315), Expect = 2e-28
Identities = 83/252 (32%), Positives = 122/252 (47%), Gaps = 21/252 (8%)
Query: 3 KSLIQQRRGKGSP------TFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTA 56
KSL++ G+G T R + A + I + V I +DP RTA
Sbjct: 31 KSLVRPLHGRGGRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTA 90
Query: 57 PVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPG 116
+A + + +G ++ IIAP GL G + G +A I GN LPL IP GT ++ +E PG
Sbjct: 91 RIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPLRNIPAGTLIHAVELRPG 150
Query: 117 DGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAG 176
G K R+ G+ ++ +E +++PSGE++ + CRAT+G V + KAG
Sbjct: 151 GGAKLARSAGSSIQLLGKEASYASLRMPSGEIRRVDVRCRATVGEVGNAEQANINWGKAG 210
Query: 177 KAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE------HHP----GKPTTTSRRAPPGRK 226
+ +K K P+ RGV MN V+HP GG E HP GKP +R A
Sbjct: 211 RMRWKGKR-----PSVRGVVMNPVDHPHGGGEGKTSGGRHPVSPWGKPEGRTRNANKSSN 265
Query: 227 VGHIAARRTGRR 238
+ RRTG++
Sbjct: 266 KFIVRRRRTGKK 277
>gb|AAG26136.1| (AF123788) ribosomal protein L2 [Calycanthus floridus]
Length = 199
Score = 127 bits (315), Expect = 2e-28
Identities = 70/189 (37%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 21 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 80
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 81 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 140
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 141 TVGQVGNVGVNQKSLGRAGSKRWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 186
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 187 -GRAPIGRK 194
>gb|AAG26145.1| (AF123797) ribosomal protein L2 [Saururus cernuus]
Length = 197
Score = 127 bits (315), Expect = 2e-28
Identities = 70/189 (37%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 22 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 81
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 82 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 141
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 142 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 187
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 188 -GRAPIGRK 195
>sp|O06047|RL2_MYCBO 50S RIBOSOMAL PROTEIN L2 >gi|2113869|emb|CAA73675.1| (Y13228) rplB
[Mycobacterium bovis BCG]
Length = 280
Score = 126 bits (314), Expect = 2e-28
Identities = 83/252 (32%), Positives = 122/252 (47%), Gaps = 21/252 (8%)
Query: 3 KSLIQQRRGKGSP------TFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTA 56
KSL++ G+G T R + A + I + V I +DP RTA
Sbjct: 31 KSLVRPLHGRGGRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNPKVAHIEYDPNRTA 90
Query: 57 PVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPG 116
+A + + +G ++ IIAP GL G + G +A I GN LPL IP GT ++ +E PG
Sbjct: 91 RIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPLRNIPAGTLIHAVELRPG 150
Query: 117 DGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAG 176
G K R+ G+ ++ +E +++PSGE++ + CRAT+G V + KAG
Sbjct: 151 GGAKLARSAGSSIQLLGKEASYASLRMPSGEIRRVDVRCRATVGEVGNAEQANINWGKAG 210
Query: 177 KAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE------HHP----GKPTTTSRRAPPGRK 226
+ +K K P+ RGV MN V+HP GG E HP GKP +R A
Sbjct: 211 RMRWKAKR-----PSVRGVVMNPVDHPHGGGEGKTSGGRHPVSPWGKPEGRTRNANKSSN 265
Query: 227 VGHIAARRTGRR 238
+ RRTG++
Sbjct: 266 KFIVRRRRTGKK 277
>sp|O66434|RL2_AQUAE 50S RIBOSOMAL PROTEIN L2 >gi|7440628|pir||G70300 ribosomal protein
L02 - Aquifex aeolicus >gi|2982766|gb|AAC06392.1|
(AE000669) ribosomal protein L02 [Aquifex aeolicus]
Length = 304
Score = 126 bits (314), Expect = 2e-28
Identities = 100/252 (39%), Positives = 132/252 (51%), Gaps = 33/252 (13%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKTL-RGVVEEIMHDPGRTAPVARVRFENGM 67
R +G+ T R HR G K Y +++ +DK+L V I +DP R+A + + + +G
Sbjct: 60 RQRGNITAR---HRGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADGE 116
Query: 68 EKLIIAPEGLLVGQEIY--------IGPDAP-IAIGNTLPLAKIPEGTYVYNIEGIPGDG 118
++ II PEGL VG + G P I GN +PL IPEGT V+NIE IPG G
Sbjct: 117 KRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKG 176
Query: 119 GKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAG 176
G+ RA GT+A V+ R K V+V++PSGE++ + C AT+G V G E LVK G
Sbjct: 177 GQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV---GLAEHELVKLG 233
Query: 177 KAYYKYKARNRFW-PTPRGVKMNAVNHPFGGKE-----HHPGKP---TTTSRRAPPGRKV 227
KA +AR W P RG MN V+HP GG E HP P T + G+K
Sbjct: 234 KA---GRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGKHPESPWGWKTKGYKTRRGKKY 290
Query: 228 G--HIAARRTGR 237
I RR GR
Sbjct: 291 SDQFIVTRRDGR 302
>gi|7525074 ribosomal protein L2 [Arabidopsis thaliana]
>gi|7525099|ref|NP_051123.1| ribosomal protein L2
[Arabidopsis thaliana] >gi|6685857|sp|P56791|RK2_ARATH
CHLOROPLAST 50S RIBOSOMAL PROTEIN L2
>gi|5881735|dbj|BAA84426.1| (AP000423) ribosomal protein
L2 [Arabidopsis thaliana] >gi|5881760|dbj|BAA84451.1|
(AP000423) ribosomal protein L2 [Arabidopsis thaliana]
Length = 274
Score = 126 bits (314), Expect = 2e-28
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ + + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G + PI +GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E RAP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GRAPIGRKKPVTPWGYPALGRRTRKRK 261
>gb|AAG26146.1| (AF123798) ribosomal protein L2 [Trochodendron aralioides]
Length = 201
Score = 126 bits (314), Expect = 2e-28
Identities = 71/189 (37%), Positives = 103/189 (53%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G L+G I G + PI +GN L
Sbjct: 23 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTEVPIKMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>gi|11465998 ribosomal protein L2 [Nicotiana tabacum]
>gi|11466035|ref|NP_054577.1| ribosomal protein L2
[Nicotiana tabacum] >gi|132866|sp|P06379|RK2_TOBAC
CHLOROPLAST 50S RIBOSOMAL PROTEIN L2
>gi|71086|pir||R5NT2 ribosomal protein L2 - common
tobacco chloroplast >gi|435269|emb|CAA77384.1| (Z00044)
ribosomal protein L2 [Nicotiana tabacum]
>gi|1223691|emb|CAA77409.1| (Z00044) ribosomal protein
L2 [Nicotiana tabacum] >gi|225238|prf||1211235BW
ribosomal protein L2 [Nicotiana tabacum]
Length = 274
Score = 126 bits (313), Expect = 3e-28
Identities = 74/207 (35%), Positives = 110/207 (52%), Gaps = 20/207 (9%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI +GN L
Sbjct: 69 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 128
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 129 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA 188
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 189 TVGQVGNVGVNQKSLGRAGSKRWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 234
Query: 218 SRRAPPGRKV-----GHIAARRTGRRK 239
RAP GRK G+ A R R++
Sbjct: 235 -GRAPIGRKKPTTPWGYPALGRRSRKR 260
>gi|11467720 ribosomal protein L2 [Guillardia theta]
>gi|3914662|sp|O46897|RK2_GUITH CHLOROPLAST 50S
RIBOSOMAL PROTEIN L2 >gi|3603045|gb|AAC35706.1|
(AF041468) ribosomal protein L2 [Guillardia theta]
Length = 275
Score = 126 bits (313), Expect = 3e-28
Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ ++K + +V + +DP R A +A + +++G ++ I+ P+ L VG +IY G
Sbjct: 61 RYRLVDFKRNKLDIPAIVASVEYDPNRNARIALLHYQDGEKRYILHPKKLAVGDKIYSGI 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
+ PI IGN +PL +P GT V+N+E IPG GG+ VR+ GT A VV+++ V +++PS E
Sbjct: 121 NVPIEIGNAMPLYNVPLGTAVHNVELIPGRGGQIVRSAGTSAQVVAKDGQVVTIKMPSNE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGK 207
++ NC ATIG V G + ++ GKA K R P+ RGV MN +HP GG
Sbjct: 181 VRMIYKNCYATIGEV---GNADIKNIRLGKAGRKRWLGIR--PSVRGVVMNPCDHPHGGG 235
Query: 208 E 208
E
Sbjct: 236 E 236
>gb|AAG26141.1| (AF123793) ribosomal protein L2 [Ginkgo biloba]
Length = 182
Score = 126 bits (313), Expect = 3e-28
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 5/171 (2%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R+A + V + +G +K I+ P G+++G I GP API++GN
Sbjct: 12 EKDISGKIVTIXYDPNRSAYLCLVHYGDGEKKYILHPRGVIIGDTIISGPRAPISVGNAP 71
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ VRA G A ++++E ++LPSGE++ + NC A
Sbjct: 72 PLTDMPLGTAIHNIEITLGRGGQLVRAAGAAAELIAKEGRSATLRLPSGEVRLISGNCSA 131
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
TIG V + L KAG + K P RGV MN V+HP GG E
Sbjct: 132 TIGQVGNVNANNRTLSKAGSKRWLGKR-----PRVRGVVMNPVDHPHGGGE 177
>gb|AAG26143.1| (AF123795) ribosomal protein L2 [Lactoris fernandeziana]
Length = 201
Score = 126 bits (313), Expect = 3e-28
Identities = 70/189 (37%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 23 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKLATLRLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>gi|11467776 ribosomal protein L2 [Nephroselmis olivacea]
>gi|5880705|gb|AAD54798.1|AF137379_21 (AF137379)
ribosomal protein L2 [Nephroselmis olivacea]
Length = 275
Score = 125 bits (312), Expect = 4e-28
Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 14/221 (6%)
Query: 10 RGKGSPTFRSPSHRFRGAVK---YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFEN 65
R +G S + R+RG Y +++ +DK + V + +DP R+A +A + +++
Sbjct: 39 RARGRNHSGSITTRWRGGGHKRLYRQIDFRRDKVGVLARVATVEYDPNRSARIALLHYQD 98
Query: 66 GMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAG 125
G ++ I+ P+GL +G E+ P+API+IGN LPL +P GT V+NIE P +GG+ VRA
Sbjct: 99 GSKRYILHPQGLAIGAEVMSSPEAPISIGNALPLVNMPLGTEVHNIELRPYNGGQLVRAA 158
Query: 126 GTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKAR 185
G A +V++E +++PSGE++ +C AT+G V + L KAG++ + +
Sbjct: 159 GAVAQLVAKEGGFGTLRMPSGEVRLVAKDCWATVGQVGHVESINLTLGKAGRSRWLDRR- 217
Query: 186 NRFWPTPRGVKMNAVNHPFGGKE-----HHPGKPTTTSRRA 221
P RG MNA +HP GG E HPG T + A
Sbjct: 218 ----PRVRGSVMNACDHPHGGGEGRCPIGHPGPLTPWGKPA 254
>gb|AAG26144.1| (AF123796) ribosomal protein L2 [Liriodendron tulipifera]
Length = 201
Score = 125 bits (312), Expect = 4e-28
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 23 EKDTSGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>emb|CAA55028.1| (X78185) rpl 2 [Hordeum vulgare]
Length = 273
Score = 125 bits (311), Expect = 5e-28
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ S + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAMHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>sp|P41096|RK2_HORVU CHLOROPLAST 50S RIBOSOMAL PROTEIN L2
Length = 273
Score = 125 bits (311), Expect = 5e-28
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ S + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAMHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>sp|O24692|RL2_SYNP6 50S RIBOSOMAL PROTEIN L2 >gi|2446893|dbj|BAA22452.1| (AB000111) 50S
ribosomal protein L2 [Synechococcus sp.]
Length = 287
Score = 125 bits (311), Expect = 5e-28
Identities = 82/228 (35%), Positives = 122/228 (52%), Gaps = 20/228 (8%)
Query: 3 KSLI---QQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDK-TLRGVVEEIMHDPGRTAP 57
KSL+ +R+G+ + + HR G + Y +++ +DK + G + I +DP R A
Sbjct: 31 KSLLVSKHRRKGRNNRGVITCRHRGGGHKRLYRIIDFKRDKRNVPGKIVSIEYDPNRNAR 90
Query: 58 VARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGD 117
++ V +E+G ++ I+ P G+ VG I G + PI +GN +PL IP GT V+N+E + G
Sbjct: 91 ISLVYYEDGEKRYILTPAGVHVGTPIIAGDETPIEVGNAMPLQNIPLGTTVHNVELVAGK 150
Query: 118 GGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGK 177
GG+ VRA G A VV++E + V ++LPS E++ C ATIG V L KAG+
Sbjct: 151 GGQIVRAAGASAQVVAKEGNYVALKLPSTEVRLVRKECYATIGAVGNAEVRNTSLGKAGR 210
Query: 178 AYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGR 225
+ + P RG MN V+HP GG E RAP GR
Sbjct: 211 KRWLGRR-----PEVRGSVMNPVDHPHGGGE----------GRAPIGR 243
>sp|P94270|RL2_BORBU 50S RIBOSOMAL PROTEIN L2 >gi|7440627|pir||H70159 ribosomal protein
L2 (rplB) - Lyme disease spirochete
>gi|2688410|gb|AAC66861.1| (AE001152) ribosomal protein
L2 (rplB) [Borrelia burgdorferi]
Length = 277
Score = 125 bits (311), Expect = 5e-28
Identities = 76/219 (34%), Positives = 114/219 (51%), Gaps = 11/219 (5%)
Query: 2 GKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARV 61
GK R G + R + + I N ++ V I +DP R+A +A +
Sbjct: 37 GKKFKSGRDSSGRISIRRRGGGHKRKYRLIDFNRRDKFSIPARVASIEYDPNRSANIALL 96
Query: 62 RFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
+++G ++ II+P+G+ VG + GP+API IGN LPL IP G V+NIE G GG+
Sbjct: 97 VYKDGEKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQL 156
Query: 122 VRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYK 181
+R+ G YA++++ + + V V+L SGE++ C ATIG + + KAGK+ +
Sbjct: 157 IRSAGGYAMILASDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRWL 216
Query: 182 YKARNRFWPTPRGVKMNAVNHPFGGKE------HHPGKP 214
+ P RGV MN V+HP GG E HP P
Sbjct: 217 GRR-----PKVRGVAMNPVDHPHGGGEGKTSGGRHPVSP 250
>pir||B75534 ribosomal protein L2 - Deinococcus radiodurans (strain R1)
>gi|6457988|gb|AAF09895.1|AE001892_6 (AE001892)
ribosomal protein L2 [Deinococcus radiodurans]
Length = 275
Score = 125 bits (311), Expect = 5e-28
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R +G T R + + I + V I +DP R+A +A + + +G +
Sbjct: 43 RNNRGRITSRFIGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEK 102
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+APEGL VG + GP+A +GN LPL +P G V+ +E +PG G + R+ GT
Sbjct: 103 RYILAPEGLTVGATVNAGPEAEPKLGNALPLRFVPVGAVVHALELVPGKGAQLARSAGTS 162
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
V +E D VIV+LPSGEL+ + C ATIG V L KAG++ + +
Sbjct: 163 VQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSRWLGRK---- 218
Query: 189 WPTPRGVKMNAVNHPFGGKEHHPG 212
P RG MN V+HP GG E G
Sbjct: 219 -PHQRGSAMNPVDHPHGGGEGRTG 241
>gb|AAG26133.1| (AF123785) ribosomal protein L2 [Acorus calamus]
Length = 201
Score = 125 bits (311), Expect = 5e-28
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 39 KTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLP 98
K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN LP
Sbjct: 24 KDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALP 83
Query: 99 LAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRAT 158
L +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC AT
Sbjct: 84 LTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSAT 143
Query: 159 IGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTS 218
+G V G ++ L +AG + K P RGV MN V+HP GG E
Sbjct: 144 VGQVGNVGANQQSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE---------- 188
Query: 219 RRAPPGRK 226
RAP GRK
Sbjct: 189 GRAPIGRK 196
>gb|AAG26135.1| (AF123787) ribosomal protein L2 [Cabomba caroliniana]
Length = 200
Score = 125 bits (311), Expect = 5e-28
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 15/186 (8%)
Query: 41 LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLA 100
+ G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN LPL
Sbjct: 26 ISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLT 85
Query: 101 KIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIG 160
+P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC AT+G
Sbjct: 86 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVG 145
Query: 161 VVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRR 220
V G +K L +AG + K P RGV MN V+HP GG E R
Sbjct: 146 QVGNVGANQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE----------GR 190
Query: 221 APPGRK 226
AP GRK
Sbjct: 191 APIGRK 196
>gb|AAG26137.1| (AF123789) ribosomal protein L2 [Ceratophyllum demersum]
Length = 201
Score = 125 bits (311), Expect = 5e-28
Identities = 68/189 (35%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G + G + PI++GN L
Sbjct: 23 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTVVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++N+E G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNVEITLGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGVNQKRLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>gb|AAG26140.1| (AF123792) ribosomal protein L2 [Drimys winteri]
Length = 201
Score = 125 bits (311), Expect = 5e-28
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 23 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLIYKNCLA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 TVGQVGNVGVNQKNLGRAGSKCWLGKR-----PVVRGVAMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 189 -GRAPIGRK 196
>gi|11466971 ribosomal protein L2 [Epifagus virginiana]
>gi|11466979|ref|NP_054398.1| ribosomal protein L2
[Epifagus virginiana] >gi|266937|sp|P30065|RK2_EPIVI
CHLOROPLAST 50S RIBOSOMAL PROTEIN L2
>gi|7440621|pir||S78397 ribosomal protein L2, plastid -
beechdrops plastid >gi|336921|gb|AAA65866.1| (M81884)
ribosomal protein L2 [Epifagus virginiana]
>gi|336923|gb|AAA65874.1| (M81884) ribosomal protein L2
[Epifagus virginiana]
Length = 274
Score = 125 bits (310), Expect = 6e-28
Identities = 70/189 (37%), Positives = 104/189 (54%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G + G + PI IGN L
Sbjct: 69 EKYIYGRIITIEYDPNRNAYICLIHYGDGDKRYILHPRGAIIGDTLVSGTEVPIIIGNAL 128
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ VRA G A ++++E ++LPSGE++ + NC A
Sbjct: 129 PLTDMPLGTAIHNIEITLGKGGQLVRAAGAVAKLIAKEGKLATLKLPSGEVRLISKNCSA 188
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN ++HP GG E
Sbjct: 189 TVGQVGNVGVNKKSLGRAGSKRWLGKR-----PVVRGVVMNPIDHPHGGGE--------- 234
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 235 -GRAPIGRK 242
>gb|AAB36825.1| (U78193) ribosomal protein L2 [Borrelia burgdorferi]
Length = 277
Score = 125 bits (310), Expect = 6e-28
Identities = 76/219 (34%), Positives = 114/219 (51%), Gaps = 11/219 (5%)
Query: 2 GKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARV 61
GK R G + R + + I N ++ V I +DP R+A +A +
Sbjct: 37 GKKFKSGRDSPGRISIRRRGGGHKRKYRLIDFNRRDKFSIPARVASIEYDPNRSANIALL 96
Query: 62 RFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
+++G ++ II+P+G+ VG + GP+API IGN LPL IP G V+NIE G GG+
Sbjct: 97 VYKDGEKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQL 156
Query: 122 VRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYK 181
+R+ G YA++++ + + V V+L SGE++ C ATIG + + KAGK+ +
Sbjct: 157 IRSAGGYAMILASDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRWL 216
Query: 182 YKARNRFWPTPRGVKMNAVNHPFGGKE------HHPGKP 214
+ P RGV MN V+HP GG E HP P
Sbjct: 217 GRR-----PKVRGVAMNPVDHPHGGGEGKTSGGRHPVSP 250
>sp|O32984|RL2_MYCLE 50S RIBOSOMAL PROTEIN L2 >gi|11276684|pir||T45367 ribosomal protein
L2 [imported] - Mycobacterium leprae
>gi|2344835|emb|CAB11437.1| (Z98756) ribosomal protein
L2 [Mycobacterium leprae]
Length = 280
Score = 125 bits (310), Expect = 6e-28
Identities = 79/240 (32%), Positives = 117/240 (47%), Gaps = 15/240 (6%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R G T R + A + I + V I +DP RTA +A + F +G +
Sbjct: 43 RNVHGRITTRHKGGGHKRAYRLIDFRRNDTDGVNAKVAHIEYDPNRTANIALLHFLDGKK 102
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+AP+GL G + G +A I GN LPL IP GT ++ +E PG G K R+ G+
Sbjct: 103 RYILAPQGLSQGDVVESGANADIKPGNNLPLRNIPAGTLIHAVELRPGGGAKLARSAGSS 162
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
++ +E +++PSGE++ + CRAT+G V + KAG+ +K K
Sbjct: 163 IQLLGKESSYASLRMPSGEIRRVDVRCRATVGEVGNAEQANINWGKAGRMRWKGKR---- 218
Query: 189 WPTPRGVKMNAVNHPFGGKE------HHP----GKPTTTSRRAPPGRKVGHIAARRTGRR 238
P+ RGV MN V+HP GG E HP GKP +R+ + RRTG++
Sbjct: 219 -PSVRGVVMNPVDHPHGGGEGKTSGGRHPVSPWGKPEGRTRKPNKSSNKLIVRRRRTGKK 277
>emb|CAB67201.1| (AJ271079) ribosomal protein L2 [Oenothera elata subsp. hookeri]
>gi|6723832|emb|CAB67244.1| (AJ271079) ribosomal protein
L2 [Oenothera elata subsp. hookeri]
Length = 274
Score = 125 bits (310), Expect = 6e-28
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 11/223 (4%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ + + HR G + Y +++ + ++ + G + I +DP R A + + + +G
Sbjct: 39 KGRNARGIITAGHRGGGHKRLYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G + PI +GN LPL ++P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTEMPLGTALHNIENTLGKGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHP----GKPTTTSRRAPPGRK 226
P RGV M V+HP GG E P KP T GR+
Sbjct: 216 --PVVRGVVMTPVDHPHGGGEGRPPIGRKKPATPWGSPALGRR 256
>sp|P17351|RK2_ORYSA CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|71088|pir||R5RZ2 ribosomal
protein L2 - rice chloroplast
Length = 273
Score = 124 bits (309), Expect = 8e-28
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ S + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
+ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>sp|Q50264|RL2_ASTYP 50S RIBOSOMAL PROTEIN L2 >gi|149866|gb|AAA25327.1| (M74770) rpl2
[Phytoplasma sp.]
Length = 276
Score = 124 bits (309), Expect = 8e-28
Identities = 85/220 (38%), Positives = 119/220 (53%), Gaps = 20/220 (9%)
Query: 9 RRGKGSPTFRSPSHRFRGAV-KYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENG 66
R +G T R HR G KY +++ ++K + G V I +DP R+A +A + + +G
Sbjct: 43 RNNQGKITVR---HRGGGVKRKYRLIDFKRNKDNIVGKVATIEYDPNRSANIALIHYLDG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
++ I+AP+GL VG +I G +A I + N L L IP GT V+NIE PG GG+ R+ G
Sbjct: 100 EKRYILAPKGLTVGMQIVSGKEADIKVANCLSLMNIPVGTTVHNIELKPGKGGQIARSAG 159
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
++ ++SRE V+++L SGE+ CRATIG + G L+ GKA K
Sbjct: 160 SFCQIISREDKYVLLRLQSGEVPKVLGTCRATIGEI---GNESYKLINYGKAGKKRFLGI 216
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
R PT RG MN +HP GG E RAP GRK
Sbjct: 217 R--PTVRGSAMNPNDHPHGGGE----------GRAPIGRK 244
>gi|11466866 ribosomal protein L2 [Oryza sativa] >gi|11466870|ref|NP_039427.1|
ribosomal protein L2 [Oryza sativa]
>gi|1213600|emb|CAA33924.1| (X15901) ribosomal protein
L2 [Oryza sativa] >gi|1213602|emb|CAA33928.1| (X15901)
ribosomal protein L2 [Oryza sativa]
>gi|226679|prf||1603356DG ribosomal protein L2 [Oryza
sativa]
Length = 273
Score = 124 bits (309), Expect = 8e-28
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ S + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
+ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>gi|11465777 50S ribosomal protein L2 [Porphyra purpurea]
>gi|1710466|sp|P51311|RK2_PORPU CHLOROPLAST 50S
RIBOSOMAL PROTEIN L2 >gi|2147049|pir||S73232 ribosomal
protein L2, chloroplast - red alga (Porphyra purpurea)
chloroplast >gi|1276777|gb|AAC08197.1| (U38804) 50S
ribosomal protein L2 [Porphyra purpurea]
Length = 294
Score = 124 bits (309), Expect = 8e-28
Identities = 71/162 (43%), Positives = 96/162 (58%), Gaps = 5/162 (3%)
Query: 45 VEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPE 104
V I +DP R A +A + + +G ++ I+ P L VG + GP API +GN LPL+ IP
Sbjct: 78 VASIEYDPNRNARIALLHYLDGEKRYILHPRSLSVGAIVVSGPMAPIEVGNALPLSTIPL 137
Query: 105 GTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAG 164
GT V+NIE P GG+ VR+ GTYA +V++E + V V+LPS E++ C ATIG V
Sbjct: 138 GTAVHNIELRPYCGGQIVRSAGTYAQIVAKEGNFVTVKLPSSEVRMIRKECYATIGQVGN 197
Query: 165 GGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGG 206
L KAG++ + K PT RGV MN V+HP GG
Sbjct: 198 IDASNITLGKAGRSRWLGKR-----PTVRGVVMNPVDHPHGG 234
>pir||D82005 50S ribosomal protein L2 NMA0126 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7378898|emb|CAB83441.1| (AL162752) 50S ribosomal
protein L2 [Neisseria meningitidis Z2491]
Length = 277
Score = 124 bits (309), Expect = 8e-28
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 45 VEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPE 104
VE I +DP RTA +A + + +G + IIAP G+ G + G +A I +GNTLP+ IP
Sbjct: 78 VERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPV 137
Query: 105 GTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAG 164
GT ++ IE PG G + R+ G A+++++E V+L SGE++ N NCRATIG V
Sbjct: 138 GTTIHCIEMKPGKGAQIARSAGASAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEV-- 195
Query: 165 GGRLEKPLVKAGKAYYKYKARNRF---WPTPRGVKMNAVNHPFGGKEHHPGK 213
G E+ L K GKA NR+ PT RGV MN V+HP GG E G+
Sbjct: 196 -GNEEQSLKKIGKA-----GANRWRGIRPTVRGVVMNPVDHPHGGGEGRTGE 241
>pir||B83116 50S ribosomal protein L2 PA4260 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9950477|gb|AAG07648.1|AE004841_26
(AE004841) 50S ribosomal protein L2 [Pseudomonas
aeruginosa]
Length = 273
Score = 124 bits (308), Expect = 1e-27
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 44 VVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIP 103
+VE + +DP RTA +A +++ +G + IIAP+G+ G ++ G API GN++PL IP
Sbjct: 77 IVERVEYDPNRTAHIALLKYADGERRYIIAPKGVAAGDQLISGIGAPIKAGNSMPLRNIP 136
Query: 104 EGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVA 163
G+ V+ IE PG G + R+ G A +V+RE V ++L SGE++ CRAT+G V+
Sbjct: 137 VGSTVHGIELKPGKGAQIARSAGASAQLVAREGAYVTLRLRSGEMRKVLAECRATLGEVS 196
Query: 164 GGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE------HHPGKP--- 214
+ L KAG ++ PT RGV MN V+HP GG E HP P
Sbjct: 197 NSEHSLRSLGKAGATRWR-----GVRPTVRGVAMNPVDHPHGGGEGRTSAGRHPVSPWGL 251
Query: 215 TTTSRRAPPGRKVGHIAARR 234
T ++ ++ ++ RR
Sbjct: 252 QTKGKKTRSNKRTDNMIVRR 271
>gb|AAG26139.1| (AF123791) ribosomal protein L2 [Dioscorea bulbifera]
Length = 190
Score = 124 bits (308), Expect = 1e-27
Identities = 64/171 (37%), Positives = 98/171 (56%), Gaps = 5/171 (2%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 21 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 80
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 81 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLA 140
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
T+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 141 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE 186
>gi|11467235 ribosomal protein L2 [Zea mays] >gi|11467278|ref|NP_043110.1|
ribosomal protein L2 [Zea mays]
>gi|132857|sp|P17788|RK2_MAIZE CHLOROPLAST 50S RIBOSOMAL
PROTEIN L2 >gi|71089|pir||R5ZM2 ribosomal protein L2 -
maize chloroplast >gi|2673858|emb|CAA60329.1| (X86563)
ribosomal protein L2 [Zea mays]
>gi|2673859|emb|CAA60371.1| (X86563) ribosomal protein
L2 [Zea mays]
Length = 273
Score = 123 bits (307), Expect = 1e-27
Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ + + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNQKDISGRIITIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>sp|P73317|RL2_SYNY3 50S RIBOSOMAL PROTEIN L2 >gi|7440623|pir||S77499 ribosomal protein
L2 - Synechocystis sp. (strain PCC 6803)
>gi|1652424|dbj|BAA17346.1| (D90905) 50S ribosomal
protein L2 [Synechocystis sp.]
Length = 276
Score = 123 bits (307), Expect = 1e-27
Identities = 84/228 (36%), Positives = 124/228 (53%), Gaps = 20/228 (8%)
Query: 3 KSLIQQR---RGKGSPTFRSPSHRFRGAVK-YIPLNYTQDK-TLRGVVEEIMHDPGRTAP 57
KSL R +G+ + + HR G K Y +++ ++K + V I +DP R A
Sbjct: 31 KSLTTNRHDQKGRNNRGVITSRHRGGGHKKLYRIIDFKRNKQNIPARVAAIEYDPNRNAR 90
Query: 58 VARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGD 117
+A + + +G ++ I+AP GL VG + G +AP IGNTLPL++IP G+ ++N+E + G
Sbjct: 91 IALLFYTDGEKRYILAPAGLQVGMTVIAGEEAPFEIGNTLPLSRIPLGSEIHNVELVAGR 150
Query: 118 GGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGK 177
GG+ VR+ G +A VV++E D V ++LPS E++ C AT+G V+ E +K GK
Sbjct: 151 GGQMVRSAGAFAQVVAKEGDYVTIKLPSKEVRMVRKECVATLGRVSNA---EFRNLKLGK 207
Query: 178 AYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGR 225
A K R P RG MN +HP GG E RAP GR
Sbjct: 208 AGRKRHLGRR--PHVRGSVMNPCDHPHGGGE----------GRAPIGR 243
>gb|AAD15254.1| (L40578) ribosomal protein L2 [Oryza sativa]
Length = 273
Score = 123 bits (307), Expect = 1e-27
Identities = 79/233 (33%), Positives = 123/233 (51%), Gaps = 13/233 (5%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ S + HR G + Y +++ + +K + G + I +DP R A + + + +G
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
+ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNKKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIA-ARRTGRRK 239
P RGV MN V+HP G + GKP + P G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPMGAVK---GKPPLVEKNPQP--PWGYPALGRRTRKRK 261
>emb|CAA37241.1| (X53066) ribosomal protein L2 [Zea mays]
Length = 273
Score = 123 bits (307), Expect = 1e-27
Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 23/238 (9%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQD-KTLRGVVEEIMHDPGRTAPVARVRFENGM 67
+G+ + + HR G + Y +++ ++ K + G + I +DP R A + + + +G
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNQKDISGRIITIEYDPNRNAYICLIHYGDGE 98
Query: 68 EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
++ I+ P G ++G I G PI++GN LPL +P GT ++NIE G GG+ RA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGA 158
Query: 128 YALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR 187
A ++++E ++LPSGE++ + NC AT+G V G +K L +AG + K
Sbjct: 159 VAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKR--- 215
Query: 188 FWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKV-----GHIA-ARRTGRRK 239
P RGV MN V+HP GG E +AP GRK G+ A RRT +RK
Sbjct: 216 --PVVRGVVMNPVDHPHGGGE----------GKAPIGRKKPTTPWGYPALGRRTRKRK 261
>sp|P47400|RL2_MYCGE 50S RIBOSOMAL PROTEIN L2 >gi|1361800|pir||A64217 ribosomal protein
L2 - Mycoplasma genitalium >gi|3844748|gb|AAC71372.1|
(U39696) ribosomal protein L2 (rpL2) [Mycoplasma
genitalium]
Length = 285
Score = 123 bits (305), Expect = 2e-27
Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 10/204 (4%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R +G T R R + + I L+ V+ I +DP R+ ++ + ++NG++
Sbjct: 45 RNNQGKITVRHHGGRHKRKYRLIDFKRYHYDNLKATVKSIEYDPNRSCFISLLHYQNGVK 104
Query: 69 KLIIAPEGLLVGQEIYIGPDA-PIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGT 127
II+P+G+ VG ++Y A I +G +PLA IPEGT V+NIE P GGK R+ G+
Sbjct: 105 TYIISPDGIKVGDQVYSSDHAIDIKLGYCMPLAFIPEGTQVHNIELNPKGGGKIARSAGS 164
Query: 128 YALVVSREK--DKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKAR 185
YA ++ +++ +I+QL SGE + F CRAT+GVV+ L+ LV GKA ++R
Sbjct: 165 YARILGQDETGKYIILQLISGETRKFLKECRATVGVVS---NLDHNLVVIGKA---GRSR 218
Query: 186 NR-FWPTPRGVKMNAVNHPFGGKE 208
++ PT RG MN +HP GG E
Sbjct: 219 HKGIRPTVRGSAMNPNDHPHGGGE 242
>sp|Q9ZI47|RL2_AQUPY 50S RIBOSOMAL PROTEIN L2 >gi|4165868|gb|AAD08788.1| (AF040100)
ribosomal protein L2 [Aquifex pyrophilus]
Length = 295
Score = 123 bits (305), Expect = 2e-27
Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 28/230 (12%)
Query: 10 RGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKTL-RGVVEEIMHDPGRTAPVARVRFENGM 67
R +G+ T R HR G K Y +++ +DK+L V I +DP R+A + + + +G
Sbjct: 60 RQRGNITAR---HRGGGHKKLYRIIDFERDKSLVPAKVVSIEYDPFRSARICLLHYADGE 116
Query: 68 EKLIIAPEGLLVGQEIY--------IGPDAP-IAIGNTLPLAKIPEGTYVYNIEGIPGDG 118
++ II PEGL VG + G P I GN +PL IPEGT ++NIE +PG G
Sbjct: 117 KRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIIHNIEFMPGKG 176
Query: 119 GKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAG 176
G+ RA GT+A V+ R +K V+V++PSGE++ + C ATIG V G E LV G
Sbjct: 177 GQIARAAGTWAQVLGRSTKKGYVLVRMPSGEVRMIHERCMATIGRV---GLAEHELVNVG 233
Query: 177 KAYYKYKARNRFW-PTPRGVKMNAVNHPFGGKE-----HHPGKPTTTSRR 220
KA +AR W P RG MN V+HP GG E HP P RR
Sbjct: 234 KA---GRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGKHPESPWDGRRR 280
>gi|11465425 unknown; 50S ribosomal protein L2 [Cyanidium caldarium]
>gi|6466328|gb|AAF12910.1|AF022186_32 (AF022186)
unknown; 50S ribosomal protein L2 [Cyanidium caldarium]
Length = 275
Score = 123 bits (305), Expect = 2e-27
Identities = 91/239 (38%), Positives = 128/239 (53%), Gaps = 19/239 (7%)
Query: 2 GKSLIQQRRGKGSPTFRSPSHRFRGAV-KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVA 59
G I R +G T R H+ G KY +++ + KT + V +I +DP R+A +A
Sbjct: 37 GIKSISGRNNQGKITCR---HKGGGHKRKYRLVDFKRCKTGVLAKVSDIYYDPNRSAHIA 93
Query: 60 RVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGG 119
+ + +G + II+P L VG + G +A IGN LPL +P G ++NIE I G GG
Sbjct: 94 LLNYLDGEKSYIISPNLLKVGTYVVSGKEASPDIGNALPLNCVPLGFEIHNIELIHGKGG 153
Query: 120 KYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
+ RA GT A ++++ +D V ++LPSGE++ F C ATIG V G ++ K GKA
Sbjct: 154 QVARAAGTSAKLIAKSQDYVTIKLPSGEIRLFRGECYATIGKV---GNIDHNNEKIGKA- 209
Query: 180 YKYKARNRFW---PTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPP-GRKVGHIAARR 234
RNR+ PT RG MNAV+HP GG E P S+ + P GR I RR
Sbjct: 210 ----GRNRWLGIRPTVRGSAMNAVDHPHGGGEGR--SPIGRSQPSTPWGRPALGIKTRR 262
>sp|Q9XD33|RL2_LEPIN 50S RIBOSOMAL PROTEIN L2 >gi|5163207|gb|AAD40586.1|AF115283_5
(AF115283) ribosomal protein L2 [Leptospira interrogans]
Length = 279
Score = 122 bits (304), Expect = 3e-27
Identities = 72/212 (33%), Positives = 118/212 (54%), Gaps = 19/212 (8%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
KY +++ + KT + VV+ + +DP R+A ++ + +++G I+AP+G+ VG + G
Sbjct: 61 KYRIIDFKRRKTNIPAVVKSLEYDPNRSAFISLICYKDGEYSYILAPDGIKVGDTVQSGA 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
+ I IGN +P+ KIP GT V+N+E G GG+ R G++ + R+ + ++++LPS E
Sbjct: 121 GSEIKIGNAMPIGKIPPGTNVHNVELQIGKGGQIARTAGSFGTIAGRDGEYILLKLPSSE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGK 207
++ + NC ATIG+ + + KAG++ + K P+ RGV MN V+HP GG
Sbjct: 181 VRKVHENCYATIGICSNKDHNLVSIGKAGRSRWLGKR-----PSVRGVVMNPVDHPHGGG 235
Query: 208 E------HHP----GKPT---TTSRRAPPGRK 226
E HP G+PT T R P K
Sbjct: 236 EGRTSGGRHPVSPWGQPTKGYKTRRSTRPSDK 267
>pir||C81231 50S ribosomal protein L2 NMB0145 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225363|gb|AAF40603.1| (AE002373) 50S ribosomal
protein L2 [Neisseria meningitidis MC58]
Length = 277
Score = 122 bits (304), Expect = 3e-27
Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 45 VEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPE 104
VE I +DP RTA +A + + +G + IIAP G+ G + G +A I +GNTLP+ IP
Sbjct: 78 VERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPV 137
Query: 105 GTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAG 164
GT ++ IE PG G + R+ G A+++++E V+L SGE++ N +CRATIG V
Sbjct: 138 GTTIHCIEMKPGKGAQIARSAGASAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEV-- 195
Query: 165 GGRLEKPLVKAGKAYYKYKARNRF---WPTPRGVKMNAVNHPFGGKEHHPGK 213
G E+ L K GKA NR+ PT RGV MN V+HP GG E G+
Sbjct: 196 -GNEEQSLKKIGKA-----GANRWRGIRPTVRGVVMNPVDHPHGGGEGRTGE 241
>gb|AAG26138.1| (AF123790) ribosomal protein L2 [Cercidiphyllum japonicum]
Length = 188
Score = 122 bits (304), Expect = 3e-27
Identities = 64/170 (37%), Positives = 96/170 (55%), Gaps = 5/170 (2%)
Query: 39 KTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLP 98
K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI +GN LP
Sbjct: 23 KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALP 82
Query: 99 LAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRAT 158
L +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC AT
Sbjct: 83 LTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAT 142
Query: 159 IGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 143 VGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE 187
>gi|11466510 ribosomal protein L2 [Reclinomonas americana]
>gi|3914785|sp|O21247|RM02_RECAM MITOCHONDRIAL 60S
RIBOSOMAL PROTEIN L2 >gi|7440625|pir||S78141 ribosomal
protein L2 - Reclinomonas americana (ATCC 50394)
mitochondrion
Length = 282
Score = 122 bits (303), Expect = 4e-27
Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 16/204 (7%)
Query: 22 HRFRG-AVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR G KY +++ + + G+VE + +DP RT +A ++ I+AP L V
Sbjct: 58 HRGGGHKTKYRYIDFKRSNYNIPGIVERLEYDPNRTCFIALIKDNENNFSYILAPHDLKV 117
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK- 138
G + G D I IGNTLPL IP GT ++NIE PG GGK VR+ G+ A ++S++++
Sbjct: 118 GDTVITGNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKDENGF 177
Query: 139 VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW---PTPRGV 195
+++LPSGE + F N ATIG+++ ++ +K GKA R+R+ P RGV
Sbjct: 178 CMLKLPSGEYRLFPNNSLATIGILS---NIDNKNIKIGKA-----GRSRWMGRRPIVRGV 229
Query: 196 KMNAVNHPFGGKEHHP--GKPTTT 217
MN V+HP GG E G+P+ T
Sbjct: 230 AMNPVDHPHGGGEGKTSGGRPSVT 253
>gb|AAD11874.2| (AF007261) ribosomal protein L2 [Reclinomonas americana]
Length = 277
Score = 122 bits (303), Expect = 4e-27
Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 16/204 (7%)
Query: 22 HRFRG-AVKYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR G KY +++ + + G+VE + +DP RT +A ++ I+AP L V
Sbjct: 53 HRGGGHKTKYRYIDFKRSNYNIPGIVERLEYDPNRTCFIALIKDNENNFSYILAPHDLKV 112
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK- 138
G + G D I IGNTLPL IP GT ++NIE PG GGK VR+ G+ A ++S++++
Sbjct: 113 GDTVITGNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKDENGF 172
Query: 139 VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW---PTPRGV 195
+++LPSGE + F N ATIG+++ ++ +K GKA R+R+ P RGV
Sbjct: 173 CMLKLPSGEYRLFPNNSLATIGILS---NIDNKNIKIGKA-----GRSRWMGRRPIVRGV 224
Query: 196 KMNAVNHPFGGKEHHP--GKPTTT 217
MN V+HP GG E G+P+ T
Sbjct: 225 AMNPVDHPHGGGEGKTSGGRPSVT 248
>gb|AAG26142.1| (AF123794) ribosomal protein L2 [Illicium parviflorum]
Length = 185
Score = 122 bits (303), Expect = 4e-27
Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 30 YIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPD 88
Y +N+ + +K + G + I +DP R A + + + +G ++ I+ P G +G I G +
Sbjct: 6 YRKINFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGARIGDTIVSGTE 65
Query: 89 APIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGEL 148
PI++GN LPL + GT ++NIE G GG+ RA GT A ++++E ++LPSGE+
Sbjct: 66 VPISMGNALPLTDMSLGTAIHNIEITLGKGGQLARAAGTVAKLIAKEGKSATLRLPSGEV 125
Query: 149 KAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
+ + NC AT+G V G +K L +AG + K P RGV MN V+HP GG E
Sbjct: 126 RLVSKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVRGVVMNPVDHPHGGGE 180
>gi|11467006 50S ribosomal protein L2 [Euglena gracilis]
>gi|132855|sp|P19165|RK2_EUGGR CHLOROPLAST 50S RIBOSOMAL
PROTEIN L2 >gi|282715|pir||S26081 ribosomal protein L2 -
Euglena gracilis chloroplast >gi|14367|emb|CAA77917.1|
(Z11874) ribosomal protein L2 [Euglena gracilis]
>gi|415756|emb|CAA50100.1| (X70810) 50S ribosomal
protein L2 [Euglena gracilis] >gi|497698|gb|AAA84224.1|
(M37463) rpl2 gene product [Euglena gracilis]
Length = 277
Score = 122 bits (302), Expect = 5e-27
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 15/191 (7%)
Query: 43 GVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKI 102
G V I +DP R A +A + ++NG + II P L VG I +PI IGN+LP++KI
Sbjct: 76 GKVISIEYDPNRNARIALIYYKNGDKSYIIHPFDLCVGNNIISDFFSPIKIGNSLPISKI 135
Query: 103 PEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVV 162
P GT ++N+E PG GG+ RA GT+ +++ E V + +PSGE++ C ATIG V
Sbjct: 136 PLGTIIHNVEFEPGKGGQIARAAGTFVQILANEGKFVTITMPSGEVRLLRRYCWATIGQV 195
Query: 163 AGGGRLEKPLVKAGKAYYKYKARNRFW---PTPRGVKMNAVNHPFGGKEHHP----GKPT 215
G L+ V GKA RNR+ PT RGV MN +HP GG E KP
Sbjct: 196 ---GNLDHSNVVLGKA-----GRNRWLGNKPTVRGVAMNPCDHPHGGGEGRSPIGRPKPV 247
Query: 216 TTSRRAPPGRK 226
T + G+K
Sbjct: 248 TPWGKPALGKK 258
>sp|P21434|RK2_NICDE CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|71087|pir||R5NT2D
ribosomal protein L2 - Debney's tobacco chloroplast
>gi|5708092|emb|CAB52367.1| (X00798) L2 protein
[Nicotiana debneyi]
Length = 266
Score = 122 bits (302), Expect = 5e-27
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI +GN L
Sbjct: 69 EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 128
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE+++ + NC A
Sbjct: 129 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRSISKNCSA 188
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L +AG + K P RGV MN V+HP G + G+P
Sbjct: 189 TVGQVGNVGVNQKSLGRAGSKRWLGKR-----PVVRGVVMNPVDHPMGVVK---GEPQLV 240
Query: 218 SRRAPPGRKVGHI 230
+ P + H+
Sbjct: 241 EKNPQPLGVILHL 253
>gb|AAG26134.1| (AF123786) ribosomal protein L2 [Asarum canadense]
Length = 201
Score = 122 bits (302), Expect = 5e-27
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P G ++G I G + PI++GN L
Sbjct: 23 EKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNAL 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHP----GK 213
T+G V G +K L +AG + K P GV MN V HP GG E K
Sbjct: 143 TVGQVGNVGVNQKSLGRAGSKCWLGKR-----PVVXGVVMNPVXHPHGGGEGXAPIGXKK 197
Query: 214 PTT 216
PTT
Sbjct: 198 PTT 200
>pir||B54547 ribosomal protein 12 - mycoplasma-like organism MLO
>gi|383758|prf||1904195A ribosomal protein L2
[Phytoplasma sp.]
Length = 276
Score = 121 bits (301), Expect = 7e-27
Identities = 84/220 (38%), Positives = 118/220 (53%), Gaps = 20/220 (9%)
Query: 9 RRGKGSPTFRSPSHRFRGAV-KYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENG 66
R +G T R HR G KY +++ ++K + G V I +DP R+A +A + + +G
Sbjct: 43 RNNQGKITVR---HRGGGVKRKYRLIDFKRNKDNIVGKVATIEYDPNRSANIALIHYLDG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
++ I+AP+GL VG +I G +A I + N L L IP GT V+NIE PG GG+ R+
Sbjct: 100 EKRYILAPKGLTVGMQIVSGKEADIKVANCLSLMNIPVGTTVHNIELKPGKGGQIARSAQ 159
Query: 127 TYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARN 186
++ ++SRE V+++L SGE+ CRATIG + G L+ GKA K
Sbjct: 160 SFCQIISREDKYVLLRLQSGEVPKVLGTCRATIGEI---GNESYKLINYGKAGKKRFLGI 216
Query: 187 RFWPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
R PT RG MN +HP GG E RAP GRK
Sbjct: 217 R--PTVRGSAMNPNDHPHGGGE----------GRAPIGRK 244
>sp|P06509|RK2_SPIOL CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 (RIBOSOMAL PROTEIN CS-L4)
>gi|71090|pir||R5SP2 ribosomal protein L2 - spinach
chloroplast >gi|12303|emb|CAA25377.1| (X00797) ribosomal
protein L2 [Spinacia oleracea]
Length = 286
Score = 121 bits (300), Expect = 9e-27
Identities = 71/203 (34%), Positives = 110/203 (53%), Gaps = 9/203 (4%)
Query: 7 QQRRGKGSPTFRSPSHRFRGAVK---YIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVR 62
Q+R GKG + R RG Y +++ + +K + G + I +DP R A + +
Sbjct: 32 QRRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGKIVTIEYDPNRNAYICLIH 91
Query: 63 FENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYV 122
+ +G ++ I+ P G ++G I G + PI +GN LPL +P GT ++NIE G GG+
Sbjct: 92 YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 151
Query: 123 RAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKY 182
RA G A ++++E ++LPSGE++ + NC AT+G V G +K L +AG +
Sbjct: 152 RAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKRLGRAGSKRWLG 211
Query: 183 KARNRFWPTPRGVKMNAVNHPFG 205
K P RGV MN V+HP G
Sbjct: 212 KR-----PVVRGVVMNPVDHPTG 229
>pir||C82717 50S ribosomal protein L2 XF1155 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106119|gb|AAF83965.1|AE003950_15
(AE003950) 50S ribosomal protein L2 [Xylella fastidiosa]
Length = 275
Score = 120 bits (299), Expect = 1e-26
Identities = 76/186 (40%), Positives = 105/186 (55%), Gaps = 6/186 (3%)
Query: 29 KYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + VE I +DP RTA +A + + +G IIAP+GL G +I GP
Sbjct: 61 RYRVIDFKRDKEAIPARVERIEYDPNRTAHIALLCYVDGERCYIIAPKGLKEGDKIISGP 120
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
+ PI +GN+LPL IP GT V+ +E P G + R+ G+ +V+RE ++L SGE
Sbjct: 121 NVPIKLGNSLPLRNIPVGTTVHAVELKPSKGAQMARSAGSSVQLVAREGVYATLRLRSGE 180
Query: 148 LKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGK 207
++ CRATIG V G E L K GKA K R PT RG MN V+HP GG
Sbjct: 181 MRRVLAECRATIGEV---GNEEHNLRKLGKAGAKRWLGVR--PTVRGAAMNPVDHPHGGG 235
Query: 208 EHHPGK 213
E G+
Sbjct: 236 EAKSGQ 241
>gi|9695401 ribosomal protein L2 [Phytophthora infestans]
>gi|6692653|gb|AAF24796.1|U17009_29 (U17009) ribosomal
protein L2 [Phytophthora infestans]
Length = 268
Score = 120 bits (298), Expect = 2e-26
Identities = 79/228 (34%), Positives = 124/228 (53%), Gaps = 14/228 (6%)
Query: 7 QQRRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFEN 65
Q+ GK + + HR G + Y +N+ + K + G V +I++DP R+A +A ++ ++
Sbjct: 38 QRANGKNNQGKITVRHRGGGHKRLYRIINFNRSKNIEGYVIKILYDPNRSANIAYIK-KD 96
Query: 66 GMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAG 125
LI+APEGL + Q I DA + +GN LPL IP G+ ++NI P GK +R+
Sbjct: 97 SKSYLILAPEGLKINQYIKSSSDAELKVGNALPLQNIPIGSLIHNISLYPHSRGKLIRSA 156
Query: 126 GTYALVVSREKDKVI-VQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKA 184
GT A ++ + +K ++L SGELK C AT+GVV+ + L KAG++ + +
Sbjct: 157 GTSAQLIQKINNKYARIRLNSGELKLILLTCFATLGVVSNINHKKIKLGKAGRSRWLNRR 216
Query: 185 RNRFWPTPRGVKMNAVNHPFGGKEHHP--GKPTTTSR----RAPPGRK 226
P+ RGV N V+HP GG E G+P+ T + + P RK
Sbjct: 217 -----PSVRGVAKNPVDHPHGGGEGKTSGGRPSVTPQGKITKGKPTRK 259
>sp|P75577|RL2_MYCPN 50S RIBOSOMAL PROTEIN L2 >gi|2146599|pir||S73989 ribosomal protein
L2 - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1674368|gb|AAB96311.1| (AE000061) ribosomal protein
L2 [Mycoplasma pneumoniae]
Length = 287
Score = 120 bits (297), Expect = 2e-26
Identities = 80/207 (38%), Positives = 114/207 (54%), Gaps = 16/207 (7%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R +G T R R + + I T + V+ I +DP R+ V+ + + NG +
Sbjct: 47 RNNQGKITVRHQGGRNKRKYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANGAK 106
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAI--GNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGG 126
II+P+G+ VG +I + + PI I G ++PLA IPEGT V+NIE P GG+ R+ G
Sbjct: 107 SYIISPDGIKVGDKI-LASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAG 165
Query: 127 TYALVVSREK--DKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKA 184
+YA ++ +++ VI+QL SGE + F CRAT+GVV+ L+ LV GKA
Sbjct: 166 SYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVS---NLDHNLVVIGKA-----G 217
Query: 185 RNR---FWPTPRGVKMNAVNHPFGGKE 208
RNR PT RG MN +HP GG E
Sbjct: 218 RNRHRGIRPTVRGSAMNPNDHPHGGGE 244
>sp|P31163|RK2_PEA CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|81970|pir||S17442
ribosomal protein L2 - garden pea chloroplast
>gi|12176|emb|CAA41756.1| (X59015) ribosomal protein L2
[Pisum sativum]
Length = 273
Score = 119 bits (296), Expect = 3e-26
Identities = 68/189 (35%), Positives = 103/189 (53%), Gaps = 16/189 (8%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K + G + I +DP R A + + + +G ++ I+ P+ + +G I G + PI +GN L
Sbjct: 69 EKDIYGRIITIEYDPNRNAHICLIHYGDGEKRYILHPKAI-IGDTIVYGTEVPIKMGNAL 127
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 128 PLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSA 187
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
T+G V G +K L + G ++ K P RGV MN V+HP GG E
Sbjct: 188 TVGQVGNVGVNQKSLGRVGAKRWRGKR-----PVVRGVVMNPVDHPHGGGE--------- 233
Query: 218 SRRAPPGRK 226
RAP GRK
Sbjct: 234 -GRAPIGRK 241
>pir||C82915 ribosomal protein L2 UU234 [imported] - Ureaplasma urealyticum
>gi|6899204|gb|AAF30643.1|AE002122_12 (AE002122)
ribosomal protein L2 [Ureaplasma urealyticum]
Length = 279
Score = 119 bits (296), Expect = 3e-26
Identities = 71/184 (38%), Positives = 111/184 (59%), Gaps = 9/184 (4%)
Query: 29 KYIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
KY +++ ++K + G ++ I +DP RT+ ++ V + +G ++ IIAP+G+ VG +I G
Sbjct: 62 KYRIIDFKRNKDNIYGTIKSIEYDPNRTSFISLVVYADGEKRYIIAPKGIKVGDKIISGN 121
Query: 88 D-APIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK--VIVQLP 144
+ I +GN+LPL IPEGT V+NIE P GG+ R+ G A ++ ++ K ++V+L
Sbjct: 122 ENIDILLGNSLPLEFIPEGTLVHNIELSPNAGGQITRSAGASAQILGFDETKKYILVKLN 181
Query: 145 SGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPF 204
SGE++ F CRATIG V+ + + L KAGK+ + PT RG MN +HP
Sbjct: 182 SGEVRKFRKECRATIGTVSNDEHILENLGKAGKSRHL-----GVRPTVRGSAMNPNDHPH 236
Query: 205 GGKE 208
GG E
Sbjct: 237 GGGE 240
>pdb|1RL2|B Chain B, Ribosomal Protein L2 Rna-Binding Domain From Bacillus
Stearothermophilus >gi|4699556|pdb|1RL2|A Chain A,
Ribosomal Protein L2 Rna-Binding Domain From Bacillus
Stearothermophilus >gi|6137591|pdb|1C04|A Chain A,
Identification Of Known Protein And Rna Structures In A
5 A Map Of The Large Ribosomal Subunit From Haloarcula
Marismortui
Length = 137
Score = 119 bits (295), Expect = 4e-26
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + G V I +DP R+A +A + + +G ++ IIAP+ L VG EI GP
Sbjct: 1 QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVGXEIXSGP 60
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
DA I IGN LPL IP GT V+NIE PG GG+ VRA GT A V+ +E VIV+L SGE
Sbjct: 61 DADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGE 120
Query: 148 LKAFNPNCRATIGVV 162
++ CRAT+G V
Sbjct: 121 VRXILGKCRATVGEV 135
>pdb|487D|I Chain I, Seven Ribosomal Proteins Fitted To A Cryo-Electron
Microscopic Map Of The Large 50s Subunit At 7.5
Angstroms Resolution
Length = 135
Score = 119 bits (295), Expect = 4e-26
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
+Y +++ +DK + G V I +DP R+A +A + + +G ++ IIAP+ L VG EI GP
Sbjct: 1 QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVGXEIXSGP 60
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGE 147
DA I IGN LPL IP GT V+NIE PG GG+ VRA GT A V+ +E VIV+L SGE
Sbjct: 61 DADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGE 120
Query: 148 LKAFNPNCRATIGVV 162
++ CRAT+G V
Sbjct: 121 VRXILGKCRATVGEV 135
>gb|AAF73305.1| (AF188849) ribosomal protein L2 [Zamia furfuracea]
Length = 201
Score = 118 bits (294), Expect = 5e-26
Identities = 70/189 (37%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 38 DKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTL 97
+K G + I +DP R+A + V + NG + I+ P G+ +G I G API++GN
Sbjct: 23 EKYTSGEIVTIEYDPNRSAYICLVHYRNGEKNYILHPRGVAIGDTITSGLRAPISMGNAP 82
Query: 98 PLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRA 157
PL +P GT ++NIE G GG+ RA G A ++++E ++LPSGE++ + NC A
Sbjct: 83 PLTSVPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEGRSTTLRLPSGEVRLISENCSA 142
Query: 158 TIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHPGKPTTT 217
TIG V + KAG + K P RGV MN V+HP GG E
Sbjct: 143 TIGQVGNVNVNNRTFGKAGSKRWLGKR-----PRVRGVAMNPVDHPHGGGE--------- 188
Query: 218 SRRAPPGRK 226
R P GRK
Sbjct: 189 -GRTPIGRK 196
>emb|CAB82073.1| (AL161803) 50S ribosomal protein L2 [Streptomyces coelicolor A3(2)]
Length = 278
Score = 117 bits (290), Expect = 1e-25
Identities = 80/240 (33%), Positives = 113/240 (46%), Gaps = 14/240 (5%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGME 68
R G T R + A + I + V I +DP RTA +A + + +G +
Sbjct: 43 RNNAGRVTVRHQGGGHKRAYRVIDFRRHDKDGVPAKVAHIEYDPNRTARIALLHYADGEK 102
Query: 69 KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTY 128
+ I+AP L G + GP A I GN L L IP GT ++ IE PG G K+ R+ G
Sbjct: 103 RYILAPRNLQQGDRVENGPGADIKPGNNLALRNIPVGTTIHAIELRPGGGAKFARSAGAS 162
Query: 129 ALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF 188
++++E +++PSGE++ + CRAT+G V G E+ + GKA K R
Sbjct: 163 VQLLAKEGTMAHLRMPSGEIRLVDQRCRATVGEV---GNAEQSNINWGKAGRKRWLGVR- 218
Query: 189 WPTPRGVKMNAVNHPFGGKE------HHPGKPTTTSR---RAPPGRKVGHIAARRTGRRK 239
PT RGV MN V+HP GG E HP P R+P +I RR +K
Sbjct: 219 -PTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGKKEGRTRSPKKASNKYIVRRRKTNKK 277
>sp|P34768|RK2_ASTLO CHLOROPLAST 50S RIBOSOMAL PROTEIN L2 >gi|481419|pir||S38607
ribosomal protein L2 - euglenid (Astasia longa) plastid
>gi|414873|emb|CAA53331.1| (X75653) 50s ribosomal
protein L2 [Astasia longa]
Length = 274
Score = 117 bits (290), Expect = 1e-25
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 16/211 (7%)
Query: 33 LNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPI 91
+ + +DK ++ G V I +DP R++ +A V + +G+++ II P L++G +I I
Sbjct: 65 IEFKRDKFSIFGKVLSIEYDPNRSSRIALVIYSDGIKRYIIQPLNLVIGNKIISDFHTTI 124
Query: 92 AIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAF 151
IGN LP+ IP GT V+N+E PG+GGK RA G ++ +++++K+ V + +PSGE +
Sbjct: 125 DIGNALPVNFIPLGTLVHNVEFKPGNGGKIARAAGAFSKIIAKDKNFVSLSMPSGETRLI 184
Query: 152 NPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW---PTPRGVKMNAVNHPFGGKE 208
+C ATIG V G L+ V GKA RNR+ P+ RG+ MN +HP GG E
Sbjct: 185 ENSCWATIGQV---GNLDFYNVILGKA-----GRNRWLGNNPSVRGIAMNPCDHPHGGGE 236
Query: 209 HHPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239
P S+ P K+ +RT + K
Sbjct: 237 GR--SPIGRSKPLTPWGKIA--LGKRTRKPK 263
>sp|Q9ZCQ8|RL2_RICPR 50S RIBOSOMAL PROTEIN L2 >gi|7440619|pir||F71671 ribosomal protein
L2 - Rickettsia prowazekii >gi|3861196|emb|CAA15096.1|
(AJ235272) 50S RIBOSOMAL PROTEIN L2 (rplB) [Rickettsia
prowazekii]
Length = 273
Score = 114 bits (283), Expect = 9e-25
Identities = 77/216 (35%), Positives = 113/216 (51%), Gaps = 19/216 (8%)
Query: 22 HRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR G K Y +++ + K + +VE I +DP RTA +A +++++G I+AP+ L +
Sbjct: 53 HRGGGHKKLYRVIDFKRKKIDISAIVERIEYDPNRTAFIALIKYDDGEYSYILAPQKLSI 112
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKV 139
G + A I IGN LPL IP GT ++N+E G GG+ R+ GT +V ++
Sbjct: 113 GDRVISSQAADIKIGNCLPLKSIPIGTTLHNVEMKIGKGGQIARSAGTSVELVGKDSGYA 172
Query: 140 IVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF--W-PTPRGVK 196
++L SGE + +C+ATIG ++ + L KAG RNR+ W P RGV
Sbjct: 173 QIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG--------RNRWLGWRPHVRGVA 224
Query: 197 MNAVNHPFGGKE------HHPGKPTTTSRRAPPGRK 226
MN V+HP GG E HP P S + RK
Sbjct: 225 MNPVDHPHGGGEGKTSGGRHPVTPWGFSTKGKKTRK 260
>sp|Q9Z7R0|RL2_CHLPN 50S RIBOSOMAL PROTEIN L2 >gi|7440616|pir||F72055 ribosomal protein
L2 CP0103 [imported] - Chlamydophila pneumoniae (strains
CWL029 and AR39) >gi|4376942|gb|AAD18783.1| (AE001647)
L2 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
>gi|7189038|gb|AAF37987.1| (AE002173) ribosomal protein
L2 [Chlamydophila pneumoniae AR39]
>gi|8979016|dbj|BAA98851.1| (AP002547) L2 ribosomal
protein [Chlamydophila pneumoniae J138]
Length = 284
Score = 111 bits (275), Expect = 8e-24
Identities = 74/213 (34%), Positives = 111/213 (51%), Gaps = 17/213 (7%)
Query: 22 HRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR GA + Y +++ ++K + V + +DP R+A +A + +E+G ++ I+AP+G+
Sbjct: 64 HRGGGAKQLYRVVDFKRNKDGITAKVVTVEYDPNRSAYIALLSYEDGEKRYILAPKGIQR 123
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKV 139
G + G +P G + L IP G V+NIE P GGK VR+ G A V+++ V
Sbjct: 124 GDVVVSGEGSPFKPGCCMTLKSIPLGLSVHNIEMRPSSGGKLVRSAGLAAQVIAKSPGYV 183
Query: 140 IVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW----PTPRGV 195
+++PSGE + N CRATIG V+ + KAG+ R W PT RG
Sbjct: 184 TLKMPSGEFRMLNEGCRATIGEVSNADHNLRVDGKAGR---------RRWMGVRPTVRGT 234
Query: 196 KMNAVNHPFGGKE--HHPGKPTTTSRRAPPGRK 226
MN V+HP GG E H+ P T + G K
Sbjct: 235 AMNPVDHPHGGGEGRHNGYIPRTPWGKVTKGLK 267
>pir||D81268 50S ribosomal protein L2 Cj1704c [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6969119|emb|CAB73690.1|
(AL139079) 50S ribosomal protein L2 [Campylobacter
jejuni]
Length = 276
Score = 111 bits (275), Expect = 8e-24
Identities = 85/234 (36%), Positives = 121/234 (51%), Gaps = 28/234 (11%)
Query: 22 HRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
H+ GA K Y +++ + K + G VE I +DP R +A + +++G ++ I+ P GL V
Sbjct: 53 HKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKRYILQPRGLSV 112
Query: 80 GQEIYIGPDA-PIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK 138
G + I GN + L IP GT V+N+E PG GG+ +R+ G YA ++ +E+
Sbjct: 113 GDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAGAYAQLMGKEEKY 172
Query: 139 VIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNR---FWPTPRGV 195
VI++L SGE++ C A+IG V G E V GKA RNR P RG
Sbjct: 173 VILRLASGEMRQVLAECMASIGEV---GNEEWANVTIGKA-----GRNRHRGIRPQTRGS 224
Query: 196 KMNAVNHPFGGKE------HHP----GKPT--TTSRRAPPGRKVGHIAARRTGR 237
MN V+HP GG E HP GKPT +RR K+ I +RR G+
Sbjct: 225 AMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKL--IISRRKGK 276
>sp|O84530|RL2_CHLTR 50S RIBOSOMAL PROTEIN L2 >gi|7440629|pir||C71507 probable L2
ribosomal protein - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3328962|gb|AAC68126.1| (AE001323) L2
Ribosomal Protein [Chlamydia trachomatis]
Length = 284
Score = 109 bits (271), Expect = 2e-23
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 22 HRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR G + Y +++ ++K + V + +DP R+A +A + + +G ++ I+AP+G+
Sbjct: 64 HRGGGVRRHYRVIDFKRNKDGIEAKVASVEYDPNRSAYIALLNYVDGEKRYILAPKGIKR 123
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKV 139
G + G +P G + L IP G V+N+E PG GGK VR+ G A ++++ V
Sbjct: 124 GDRVISGEGSPFKTGCCMTLKSIPLGLSVHNVEMRPGSGGKLVRSAGLSAQIIAKTAGYV 183
Query: 140 IVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNA 199
+++PSGE + N CRAT+G V+ KAG+ +K PT RG MN
Sbjct: 184 TLKMPSGEFRMLNEMCRATVGEVSNADHNLCVDGKAGRRRWK-----GIRPTVRGTAMNP 238
Query: 200 VNHPFGGKE 208
V+HP GG E
Sbjct: 239 VDHPHGGGE 247
>pir||A81661 ribosomal protein L2 TC0812 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190840|gb|AAF39614.1| (AE002347)
ribosomal protein L2 [Chlamydia muridarum]
Length = 284
Score = 109 bits (270), Expect = 3e-23
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 22 HRFRGAVK-YIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLV 79
HR G + Y +++ ++K + V + +DP R+A +A + + +G ++ I+AP+G+
Sbjct: 64 HRGGGVRRHYRVIDFKRNKDGVEAKVASVEYDPNRSAYIALLNYVDGEKRYILAPKGIKR 123
Query: 80 GQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDKV 139
G + G +P G + L IP G V+N+E PG GGK VR+ G A ++++ V
Sbjct: 124 GDRVISGEGSPFKTGCCMTLKSIPLGISVHNVEMRPGSGGKLVRSAGLSAQIIAKTDGYV 183
Query: 140 IVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNA 199
+++PSGE + N CRAT+G V+ KAG+ +K PT RG MN
Sbjct: 184 TLKMPSGEFRMLNEMCRATVGEVSNADHNLCVDGKAGRRRWK-----GIRPTVRGTAMNP 238
Query: 200 VNHPFGGKE 208
V+HP GG E
Sbjct: 239 VDHPHGGGE 247
>sp|P56030|RL2_HELPY 50S RIBOSOMAL PROTEIN L2 >gi|7440624|pir||D64684 ribosomal protein
L2 - Helicobacter pylori (strain 26695)
>gi|2314478|gb|AAD08355.1| (AE000633) ribosomal protein
L2 (rpl2) [Helicobacter pylori 26695]
Length = 276
Score = 109 bits (269), Expect = 4e-23
Identities = 76/227 (33%), Positives = 112/227 (48%), Gaps = 17/227 (7%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENG 66
R G T R H+ RGA K Y +++ ++K + G V I +DP R A +A V + +G
Sbjct: 43 RNNNGRITSR---HKERGAKKLYRIIDFKRNKYNIEGKVAAIEYDPYRNARIALVVYPDG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDA-PIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAG 125
++ I+ P GL VG + I +G + L IP GT V+NIE PG GG+ R+
Sbjct: 100 DKRYILQPSGLKVGDSVIAAEGGLDIKVGFAMKLKNIPIGTVVHNIEMHPGAGGQLARSA 159
Query: 126 GTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKAR 185
G A ++ RE I+++PS E++ C A++GVV + + KAG+ ++
Sbjct: 160 GMSAQIMGRENKYTIIRMPSSEMRYILSECMASVGVVGNEDFINVSIGKAGRNRHR---- 215
Query: 186 NRFWPTPRGVKMNAVNHPFGGKE------HHPGKPTTTSRRAPPGRK 226
P RG MN V+HP GG E HP P T + RK
Sbjct: 216 -GIRPQTRGSAMNPVDHPHGGGEGKTGTSGHPVSPWGTPAKGYKTRK 261
>sp|Q9ZJR6|RL2_HELPJ 50S RIBOSOMAL PROTEIN L2 >gi|7440618|pir||D71835 ribosomal protein
L2 - Helicobacter pylori (strain J99)
>gi|4155813|gb|AAD06787.1| (AE001547) 50S RIBOSOMAL
PROTEIN L2 [Helicobacter pylori J99]
Length = 276
Score = 108 bits (267), Expect = 7e-23
Identities = 76/227 (33%), Positives = 112/227 (48%), Gaps = 17/227 (7%)
Query: 9 RRGKGSPTFRSPSHRFRGAVK-YIPLNYTQDK-TLRGVVEEIMHDPGRTAPVARVRFENG 66
R G T R H+ RGA K Y +++ ++K + G V I +DP R A +A V + +G
Sbjct: 43 RNNNGRITSR---HKERGAKKLYRIIDFKRNKYNIEGKVAAIEYDPYRNARIALVVYPDG 99
Query: 67 MEKLIIAPEGLLVGQEIYIGPDA-PIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAG 125
++ I+ P GL VG + I +G + L IP GT V+NIE PG GG+ R+
Sbjct: 100 DKRYILQPSGLKVGDSVIAAEGGLDIKVGFAMKLKNIPIGTVVHNIEMHPGAGGQLARSA 159
Query: 126 GTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKAR 185
G A ++ RE I+++PS E++ C A++GVV + + KAG+ ++
Sbjct: 160 GMSAQIMGRENKYTILRMPSSEMRYILSECMASVGVVGNEDFINVSIGKAGRNRHR---- 215
Query: 186 NRFWPTPRGVKMNAVNHPFGGKE------HHPGKPTTTSRRAPPGRK 226
P RG MN V+HP GG E HP P T + RK
Sbjct: 216 -GIRPQTRGSAMNPVDHPHGGGEGKTGTSGHPVSPWGTPAKGYKTRK 261
>pir||R5YM2C ribosomal protein L2 - Mycoplasma capricolum
Length = 281
Score = 108 bits (266), Expect = 9e-23
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 28/234 (11%)
Query: 3 KSLIQQRRGKGSPTFR---SPSHRFRG-AVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAP 57
KSL+ + KG R + H+ G KY +++ ++K + G + I +DP R A
Sbjct: 33 KSLVVSKSSKGGRNNRGLITTRHKGGGHKQKYRIIDFKRNKRDIFGTISTIEYDPNRNAF 92
Query: 58 VARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGD 117
+ V + +G ++ I+ +G+ VG ++ +A I +GN+ PL IPEGT ++N+E PG
Sbjct: 93 ICLVNYVDGEKRYILFAKGMQVGMKVVASENADIKVGNSAPLKNIPEGTLLHNVELKPGK 152
Query: 118 GGKYVRAGGTYALVVSREKD--KVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKA 175
GG+ R+ G+ ++ ++ D V ++L SGE++ C ATIG V G E LV
Sbjct: 153 GGQIARSAGSSVQLLGKDDDGRYVTLRLSSGEVRKVLSECYATIGEV---GNEEYNLVNW 209
Query: 176 GKAYYKYKARNRF---WPTPRGVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRK 226
GKA RNR+ PT RG MN + P GG E RAP GRK
Sbjct: 210 GKA-----GRNRWRGIRPTVRGSVMNPNDQPHGGGE----------GRAPIGRK 248
>sp|O52335|RL2_MYCGA 50S RIBOSOMAL PROTEIN L2 >gi|2766506|gb|AAB95390.1| (AF036708)
ribosomal protein L2 [Mycoplasma gallisepticum]
Length = 283
Score = 108 bits (266), Expect = 9e-23
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 10/209 (4%)
Query: 3 KSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVR 62
KS + +GK + R + + + N DK +V+ I +DP R+A ++ +
Sbjct: 41 KSSGRNNQGKITVRHRGGGSKRKYRIIDFKRNLHDDKI--ALVKSIEYDPNRSAFISLIA 98
Query: 63 FENGMEKLIIAPEGLLVGQEIYIGPDA-PIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
+ENG I+ P+G+ VG ++ A I +GN +PL IPEGT V+NIE PG G +
Sbjct: 99 YENGYRSYILTPQGIKVGDKVVSSSQAIDIKVGNCMPLEFIPEGTMVHNIEMTPGKGAQI 158
Query: 122 VRAGGTYALVVSREKDKVIVQLPSG--ELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAY 179
R+ G YA ++ ++ + L G E++ F NCRA +G+ + L KAG
Sbjct: 159 ARSAGAYAQILGKDDTGKYINLKLGSKEVRKFLKNCRAVVGIASNVDHNLVLLGKAGTTR 218
Query: 180 YKYKARNRFWPTPRGVKMNAVNHPFGGKE 208
+K PT RG MN +HP GG E
Sbjct: 219 HK-----GIRPTVRGSAMNPNDHPHGGGE 242
>sp|P10133|RL2_MYCCA 50S RIBOSOMAL PROTEIN L2 >gi|44212|emb|CAA29707.1| (X06414)
ribosomal protein L2 (AA 1-281) [Mycoplasma capricolum]
Length = 281
Score = 105 bits (259), Expect = 6e-22
Identities = 72/204 (35%), Positives = 109/204 (53%), Gaps = 24/204 (11%)
Query: 29 KYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGP 87
KY +++ ++K + G + I +DP R A + V + +G ++ I+ +G+ VG ++
Sbjct: 63 KYRIIDFKRNKRDIFGTISTIEYDPNRNAFICLVNYVDGEKRYILFAKGMQVGMKVVASE 122
Query: 88 DAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKD--KVIVQLPS 145
+A I +GN+ PL IPEGT ++N+E PG GG+ R+ G+ ++ ++ D V ++L S
Sbjct: 123 NADIKVGNSAPLKNIPEGTLLHNVELKPGKGGQIARSAGSSVQLLGKDDDGRYVTLRLSS 182
Query: 146 GELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRF---WPTPRGVKMNAVNH 202
GE++ C ATIG V G E LV GKA RNR+ PT RG MN +
Sbjct: 183 GEVRKVLSECYATIGEV---GNEEYNLVNWGKA-----GRNRWRGIRPTVRGSVMNPNDQ 234
Query: 203 PFGGKEHHPGKPTTTSRRAPPGRK 226
P GG E RAP GRK
Sbjct: 235 PHGGGE----------GRAPIGRK 248
>sp|P92812|RM02_ORYSA MITOCHONDRIAL 60S RIBOSOMAL PROTEIN L2
Length = 502
Score = 100 bits (246), Expect = 2e-20
Identities = 69/189 (36%), Positives = 95/189 (49%), Gaps = 14/189 (7%)
Query: 53 GRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIE 112
GRT RV E G + P EI D +GN++PLA I GT+V++IE
Sbjct: 325 GRTVNKGRV--EGGSQLAASWPRPPAYRHEIL---DLNSKVGNSIPLADIRMGTWVHDIE 379
Query: 113 GIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
PG G K RA GTYA ++ + +V+LPSG K + CRATIG+V+ + L
Sbjct: 380 CHPGQGAKLARAAGTYAKIIKEPASQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKL 439
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHP--GKPTTTSRRAPPGRKVGHI 230
KAG++ + + P RGV MN V+HP GG E G+P+ + P K G
Sbjct: 440 RKAGQSRWSGRR-----PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKP--TKAGFR 492
Query: 231 AARRTGRRK 239
A G+R+
Sbjct: 493 AGVGVGKRR 501
>pir||T03019 probable ribosomal protein L2 [imported] - rice mitochondrion
>gi|1877025|dbj|BAA11350.1| (D78336) ribosomal protein
L2 [Oryza sativa]
Length = 502
Score = 99.8 bits (245), Expect = 3e-20
Identities = 69/189 (36%), Positives = 95/189 (49%), Gaps = 14/189 (7%)
Query: 53 GRTAPVARVRFENGMEKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIE 112
GRT RV E G + P EI D +GN++PLA I GT+V++IE
Sbjct: 325 GRTVNKGRV--EGGSQLAASWPRPPAYRHEIL---DLNSKVGNSIPLADIRMGTWVHDIE 379
Query: 113 GIPGDGGKYVRAGGTYALVVSREKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPL 172
PG G K RA GTYA ++ + +V+LPSG K + CRATIG+V+ + L
Sbjct: 380 CHPGQGAKLARAAGTYAKIIKEPAPQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKL 439
Query: 173 VKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEHHP--GKPTTTSRRAPPGRKVGHI 230
KAG++ + + P RGV MN V+HP GG E G+P+ + P K G
Sbjct: 440 RKAGQSRWSGRR-----PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKP--TKAGFR 492
Query: 231 AARRTGRRK 239
A G+R+
Sbjct: 493 AGVGVGKRR 501
>dbj|BAA25829.1| (AB007168) ribosomal protein L8 [Homo sapiens]
Length = 130
Score = 94.0 bits (230), Expect = 1e-18
Identities = 53/128 (41%), Positives = 77/128 (59%), Gaps = 7/128 (5%)
Query: 8 QRRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKT-LRGVVEEIMHDPGRTAPVARVRFENG 66
QR+G GS FR+ +GA + +++ + ++G+V++I+HDPGR AP+A+V F +
Sbjct: 4 QRKGAGS-VFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDP 62
Query: 67 ME-----KLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKY 121
+L IA EG+ GQ +Y G A + IGN LP+ +PEGT V +E PGD GK
Sbjct: 63 YRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKL 122
Query: 122 VRAGGTYA 129
RA G YA
Sbjct: 123 ARASGNYA 130
>gi|6320785 mitochondrial ribosomal protein L2 of the large subunit; Rml2p
[Saccharomyces cerevisiae]
>gi|418426|sp|P32611|YEG0_YEAST PUTATIVE 60S
MITOCHONDRIAL RIBOSOMAL PROTEIN YEL050C
>gi|320735|pir||S30827 ribosomal protein L2,
mitochondrial - yeast (Saccharomyces cerevisiae)
>gi|603629|gb|AAB64992.1| (U18779) Yel050cp
[Saccharomyces cerevisiae]
Length = 393
Score = 87.8 bits (214), Expect = 1e-16
Identities = 72/222 (32%), Positives = 103/222 (45%), Gaps = 31/222 (13%)
Query: 9 RRGKGSPTFRSPSHRFRGAVKYIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFEN-GM 67
R G T R R + I N + V+ I +DPGR++ +A ++ G
Sbjct: 133 RNNSGKITVRHQGGGHRNRTRLIDFNRWEGGAQ--TVQRIEYDPGRSSHIALLKHNTTGE 190
Query: 68 EKLIIAPEGLLVGQEIY-------------IGPDAPIAI--------GNTLPLAKIPEGT 106
IIA +GL G + +G AI GN LP++ IP GT
Sbjct: 191 LSYIIACDGLRPGDVVESFRRGIPQTLLNEMGGKVDPAILSVKTTQRGNCLPISMIPIGT 250
Query: 107 YVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAG 164
++N+ P GK+ R+ GTYA V+++ EK K IV+L SGE + + ATIGVV+
Sbjct: 251 IIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEAVATIGVVSN 310
Query: 165 GGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGG 206
+ L KAG++ + PT RGV MN +HP GG
Sbjct: 311 IDHQNRSLGKAGRSRWL-----GIRPTVRGVAMNKCDHPHGG 347
>gi|7524993 ribosomal protein L2 [Dictyostelium discoideum]
>gi|11276682|pir||T43770 ribosomal protein L2 [imported]
- slime mold (Dictyostelium discoideum) mitochondrion
>gi|1088427|dbj|BAA04737.1| (D21196) ribosomal protein
L2 [Dictyostelium discoideum]
>gi|4958896|dbj|BAA78073.1| (AB000109) ribosomal protein
L2 [Dictyostelium discoideum]
Length = 266
Score = 85.0 bits (207), Expect = 7e-16
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 10 RGKGSPTFRSPSHRFRGAVKYIPLNYTQ---DKTLRGVVEEIMHDPGRTAPVARVRF-EN 65
R KG RS + +YI +Y Q DK L V I +DP R+A +A +
Sbjct: 22 RNKGLIAIRSRGGALKRKYRYIE-HYKQKWMDKWL--FVMRIEYDPNRSAHIALCSILKE 78
Query: 66 GMEKLIIAPEGLLVGQEIYIGPD--APIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVR 123
G+ +I+ L VG I + +GNT + IPEG + NIE I G K R
Sbjct: 79 GIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISR 138
Query: 124 AGGTYALVVSREKDKV-IVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKY 182
A GT +L++ + K +V+L S E + + C ATIG V+ +E+ L + KA Y
Sbjct: 139 AAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVS---NIERKLKQNKKASYSR 195
Query: 183 KARNRFWPTPRGVKMNAVNHPFGGK 207
K R P RG+ MN V+HP GG+
Sbjct: 196 KRGIR--PIVRGLAMNPVDHPHGGR 218
>gi|11466197 ribosomal protein L2 [Naegleria gruberi]
>gi|10444232|gb|AAG17798.1|AF288092_23 (AF288092)
ribosomal protein L2 [Naegleria gruberi]
Length = 268
Score = 75.7 bits (183), Expect = 5e-13
Identities = 66/228 (28%), Positives = 107/228 (45%), Gaps = 21/228 (9%)
Query: 22 HRFRGAVK-YIPLNYTQDKTLRGVVEEIMHDPGRTAPVARVRFENGMEKLIIAPEGLLVG 80
H+ RG K Y +++ K + VVE + +DP R+ + V ++NG+ I+A +G
Sbjct: 51 HKERGHKKLYRLVDFYYLKDIPYVVESLEYDPNRSGFINLVYYKNGIYSFILATHNTFIG 110
Query: 81 QEIYIGPDAP--IAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREKDK 138
+ GN +P G+ V+N+ + KY+R+ GT+ L++ +E +
Sbjct: 111 NVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKAKYLRSAGTFGLLLKKENNM 170
Query: 139 VIVQLPSGELK--AFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFW---PTPR 193
+V+LPS + F G + L + V GKA R+R+ PT R
Sbjct: 171 ALVKLPSNKNNNDVFLSCSLFGFGTLGKTSNLMQRNVNLGKA-----GRSRWLGIRPTVR 225
Query: 194 GVKMNAVNHPFGGKEHHPGKPTTTSRRAPPGRKVGHIA--ARRTGRRK 239
GV MN V+HP GG E GK S++A P K + +R+ R+K
Sbjct: 226 GVAMNPVDHPHGGGE---GK---KSKKASPTNKWASVIKHSRKLKRKK 267
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.140 0.421
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104355889
Number of Sequences: 2977
Number of extensions: 5141024
Number of successful extensions: 10267
Number of sequences better than 1.0e-10: 156
Number of HSP's better than 0.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 9894
Number of HSP's gapped (non-prelim): 159
length of query: 239
length of database: 189,106,746
effective HSP length: 52
effective length of query: 187
effective length of database: 157,985,422
effective search space: 29543273914
effective search space used: 29543273914
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)