BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2134 (rpl19E) DE:LSU ribosomal protein L19E (rpl19E)
(151 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75145 lsu ribosomal protein l19e (rpl19e) PAB2134 - Pyroco... 306 9e-83
sp|O59437|RL19_PYRHO 50S RIBOSOMAL PROTEIN L19E >gi|7440945|pir|... 288 2e-77
dbj|BAB13702.1| (AB040118) ribosomal protein PfeL19 [Pyrococcus ... 287 4e-77
gi|11499491 LSU ribosomal protein L19E (rpl19E) [Archaeoglobus f... 172 2e-42
sp|P54043|RL19_METJA 50S RIBOSOMAL PROTEIN L19E >gi|2144774|pir|... 170 8e-42
sp|O26129|RL19_METTH 50S RIBOSOMAL PROTEIN L19E >gi|7440946|pir|... 169 2e-41
sp|P14024|RL19_METVA 50S RIBOSOMAL PROTEIN L19E (ORF E) >gi|7126... 155 3e-37
sp|P14329|RL19_DICDI 60S RIBOSOMAL PROTEIN L19 (VEGETATIVE SPECI... 152 3e-36
sp|O02639|RL19_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L19 >gi|7495... 148 2e-35
gb|AAF47305.1| (AE003465) RpL19 gene product [Drosophila melanog... 146 9e-35
sp|Q9YF93|RL19_AERPE 50S RIBOSOMAL PROTEIN L19E >gi|7440949|pir|... 142 2e-33
dbj|BAB00084.1| (AB022217) 60S ribosome protein L19-like [Arabid... 142 2e-33
pir||T01426 ribosomal protein L19.T2H3.3 - Arabidopsis thaliana ... 139 1e-32
emb|CAB80716.1| (AL161494) putative ribosomal protein L19 [Arabi... 139 1e-32
gb|AAF02889.1|AC009525_23 (AC009525) Putative ribosomal protein ... 139 2e-32
sp|P36241|RL19_DROME 60S RIBOSOMAL PROTEIN L19 >gi|1079135|pir||... 138 2e-32
gi|4506609 ribosomal protein L19 [Homo sapiens] >gi|11525848|ref... 136 1e-31
gi|6677773 ribosomal protein L19 [Mus musculus] >gi|132741|sp|P2... 136 1e-31
pdb|1FFK|M Chain M, Crystal Structure Of The Large Ribosomal Sub... 134 5e-31
sp|P14119|RL19_HALMA 50S RIBOSOMAL PROTEIN L19E (HMAL19) (HL24) ... 132 1e-30
sp|P05734|RL19_SCHPO 60S RIBOSOMAL PROTEIN L19 (YL15) >gi|749005... 132 1e-30
pir||T41071 60S ribosomal protein L19 - fission yeast (Schizosa... 132 1e-30
pir||T43307 ribosomal protein L19 - fission yeast (Schizosacchar... 127 6e-29
gb|AAG19954.1| (AE005077) 50S ribosomal protein L19E; Rpl19e [Ha... 126 1e-28
sp|O05639|RL19_SULAC 50S RIBOSOMAL PROTEIN L19E >gi|2052264|emb|... 125 3e-28
gi|6319444 Ribosomal protein L19B (YL14) (L23B) (rpl5L); Rpl19bp... 118 2e-26
pir||A56846 ribosomal protein L19 - rat 118 3e-26
sp|P49693|RL19_ARATH 60S RIBOSOMAL PROTEIN L19 117 5e-26
emb|CAA54504.1| (X77291) ribosomal protein L19 [Saccharomyces ce... 117 7e-26
emb|CAC12377.1| (AL445067) probable 50S ribosomal protein L19 [T... 116 9e-26
sp|Q9UX89|RL19_SULSO 50S RIBOSOMAL PROTEIN L19E >gi|6015776|emb|... 111 5e-24
gb|AAK41001.1| LSU ribosomal protein L19E (rpl19E) [Sulfolobus s... 111 5e-24
emb|CAB46824.1| (AJ388522) Ribosomal protein [Canis familiaris] 99 3e-20
sp|Q08066|RL19_MAIZE 60S RIBOSOMAL PROTEIN L19 69 2e-11
pir||T03648 probable ribosomal protein L19 - maize (fragment) 69 2e-11
gb|AAA18552.1| (M95065) putative ribosomal protein L19 [Zea mays] 68 4e-11
>pir||F75145 lsu ribosomal protein l19e (rpl19e) PAB2134 - Pyrococcus abyssi
(strain Orsay) >gi|5457755|emb|CAB49245.1| (AJ248284)
LSU ribosomal protein L19E (rpl19E) [Pyrococcus abyssi]
Length = 151
Score = 306 bits (775), Expect = 9e-83
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR
Sbjct: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>sp|O59437|RL19_PYRHO 50S RIBOSOMAL PROTEIN L19E >gi|7440945|pir||B71185 probable
ribosomal protein L19 - Pyrococcus horikoshii
>gi|3258190|dbj|BAA30873.1| (AP000007) 150aa long
hypothetical 50S ribosomal protein L19 [Pyrococcus
horikoshii]
Length = 150
Score = 288 bits (730), Expect = 2e-77
Identities = 137/150 (91%), Positives = 148/150 (98%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M TLKMQRR+AAELLKCGENR+WIDPE+VD+VASAITREDIRRLIKEGVI+KKP++GQSR
Sbjct: 1 MNTLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALR+ELRKLKEQKKIDR+TY
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKK 150
RMLYIRAKGGQFK+KHQLY+FLEEH LLKK
Sbjct: 121 RMLYIRAKGGQFKNKHQLYLFLEEHGLLKK 150
>dbj|BAB13702.1| (AB040118) ribosomal protein PfeL19 [Pyrococcus furiosus]
Length = 150
Score = 287 bits (727), Expect = 4e-77
Identities = 137/150 (91%), Positives = 146/150 (97%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M TLKMQRR+AAE+LKCGENRIWIDPER+DDVASAI REDI+RLIKEGVIKKKP+KGQSR
Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAIPREDIKRLIKEGVIKKKPIKGQSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
YRA+IRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLK QKKIDR+TY
Sbjct: 61 YRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKK 150
RMLYIRAKGGQFK+KHQLY+FLEEH LLKK
Sbjct: 121 RMLYIRAKGGQFKNKHQLYLFLEEHGLLKK 150
>gi|11499491 LSU ribosomal protein L19E (rpl19E) [Archaeoglobus fulgidus]
>gi|3914682|sp|O28372|RL19_ARCFU 50S RIBOSOMAL PROTEIN
L19E >gi|7440947|pir||B69488 LSU ribosomal protein L19E
(rpl19E) homolog - Archaeoglobus fulgidus
>gi|2648632|gb|AAB89342.1| (AE000971) LSU ribosomal
protein L19E (rpl19E) [Archaeoglobus fulgidus]
Length = 149
Score = 172 bits (431), Expect = 2e-42
Identities = 81/141 (57%), Positives = 109/141 (76%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
L +QRR+AA +LKCGENR+W DP ++D+A+A T++DIR LI++GVIK+KPV G SR R
Sbjct: 6 LSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARI 65
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
R QK+KGR RG GSRKG K ARM +K +WI IRALRK LR++K + +DRRTYR+L
Sbjct: 66 NKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRIL 125
Query: 124 YIRAKGGQFKSKHQLYMFLEE 144
Y +AKGG+F+S L +++E+
Sbjct: 126 YRKAKGGEFRSVAHLKIYVEQ 146
>sp|P54043|RL19_METJA 50S RIBOSOMAL PROTEIN L19E >gi|2144774|pir||A64359 ribosomal
protein L19 - Methanococcus jannaschii
>gi|1591175|gb|AAB98462.1| (U67497) LSU ribosomal
protein L19E [Methanococcus jannaschii]
Length = 151
Score = 170 bits (426), Expect = 8e-42
Identities = 82/146 (56%), Positives = 108/146 (73%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
+ +QRR+AAE+LKCG R+WIDP ++D V A++++DIR LIKEGVIKKK KG S R
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
+ EQ+KKGR RGPGSR+G AR KE W+ TIRALRK L++L++ KIDR+ YR L
Sbjct: 66 KKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKL 125
Query: 124 YIRAKGGQFKSKHQLYMFLEEHNLLK 149
Y AKGG F+S+ L++++ EH LLK
Sbjct: 126 YRMAKGGAFRSRSHLFLYMREHELLK 151
>sp|O26129|RL19_METTH 50S RIBOSOMAL PROTEIN L19E >gi|7440946|pir||G69125 ribosomal
protein L19 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621058|gb|AAB84530.1| (AE000796)
ribosomal protein L19 [Methanobacterium
thermoautotrophicum]
Length = 148
Score = 169 bits (423), Expect = 2e-41
Identities = 79/146 (54%), Positives = 112/146 (76%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
L Q+R+AA++LK G NRIWIDPER+D+V+ AITR+ +++LIK+G IK KP KG S YR+
Sbjct: 3 LTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRS 62
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
+ +QKKKGR RGPGS KG K AR KK+ W+ TIRALRK+L+++++ ++I++ TYR L
Sbjct: 63 KKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKL 122
Query: 124 YIRAKGGQFKSKHQLYMFLEEHNLLK 149
Y AKGG FKSK + + +H++L+
Sbjct: 123 YKMAKGGAFKSKSYMKTYARDHDMLR 148
>sp|P14024|RL19_METVA 50S RIBOSOMAL PROTEIN L19E (ORF E) >gi|71267|pir||R5MXE ribosomal
protein L19.eR - Methanococcus vannielii
>gi|44766|emb|CAA34698.1| (X16720) ORF e [Methanococcus
vannielii]
Length = 149
Score = 155 bits (387), Expect = 3e-37
Identities = 72/142 (50%), Positives = 104/142 (72%)
Query: 7 QRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIR 66
QRR+AA +L CG +R+W+DPE ++ V AIT++DIR LI +G+I KK KG S R +
Sbjct: 6 QRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEV 65
Query: 67 HEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIR 126
EQK+KG+ +GPGSR+G K AR KKE W+ TIR LR L++L+E +KI+R +YR LY
Sbjct: 66 QEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRM 125
Query: 127 AKGGQFKSKHQLYMFLEEHNLL 148
AKGG F+S++ + ++++EH +L
Sbjct: 126 AKGGAFRSRNHMKLYMKEHGIL 147
>sp|P14329|RL19_DICDI 60S RIBOSOMAL PROTEIN L19 (VEGETATIVE SPECIFIC PROTEIN V14) (22 KD
CALMODULIN-BINDING PROTEIN) >gi|71266|pir||R5DO9E
ribosomal protein L19.e - slime mold (Dictyostelium
discoideum) >gi|295737|emb|CAA33443.1| (X15383) V14
[Dictyostelium discoideum] >gi|443591|gb|AAA33247.1|
(L27657) ribosomal protein [Dictyostelium discoideum]
Length = 186
Score = 152 bits (379), Expect = 3e-36
Identities = 74/151 (49%), Positives = 104/151 (68%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+AA +LKCG+ R+WIDP + DVA A +R+++RRLI G I +KPV SR
Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR + K+ GRHRG G+R G + AR+ K LWI+ IR LR+ L+K +E KKID+ +Y
Sbjct: 61 SRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
R LY++AKG FK+K L ++ + K R
Sbjct: 121 RELYLKAKGNVFKNKRTLIEYIVKSKTEKLR 151
>sp|O02639|RL19_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L19 >gi|7495739|pir||T29135
hypothetical protein C09D4.5 - Caenorhabditis elegans
>gi|2076889|gb|AAB53979.1| (AF002196) strong similarity
to 60S ribosome protein L19 [Caenorhabditis elegans]
Length = 198
Score = 148 bits (371), Expect = 2e-35
Identities = 67/151 (44%), Positives = 103/151 (67%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L++Q+R+A+ +LKCG++R+W+DP V +++ A +R+ IRRL+ +G+I +KPV SR
Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
+RAR E ++KGRH G G R+G ARM +K LWI+ +R LR LR+ ++ KK+D+ Y
Sbjct: 61 FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
LY+RAKG FK+K L ++ + KR
Sbjct: 121 HELYLRAKGNNFKNKKNLIEYIFKKKTENKR 151
>gb|AAF47305.1| (AE003465) RpL19 gene product [Drosophila melanogaster]
Length = 203
Score = 146 bits (366), Expect = 9e-35
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+AA +L+CG+ ++W+DP ++++A+ +R++IR+LIK+G+I KKPV SR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
YR R E ++KGRH G G RKG ARM K LW++ R LR+ L+K ++ KKIDR Y
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
LY++ KG FK+K L ++ + K+R
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQR 151
>sp|Q9YF93|RL19_AERPE 50S RIBOSOMAL PROTEIN L19E >gi|7440949|pir||C72726 probable
ribosomal protein L19 APE0348 - Aeropyrum pernix
(strain K1) >gi|5103987|dbj|BAA79303.1| (AP000059) 155aa
long hypothetical 50S ribosomal protein L19 [Aeropyrum
pernix]
Length = 155
Score = 142 bits (355), Expect = 2e-33
Identities = 69/146 (47%), Positives = 101/146 (68%), Gaps = 2/146 (1%)
Query: 5 KMQRRVAAELLKCGENRIWI--DPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYR 62
+ QRR+AAE+L GE+RIWI DPE +++ A+T+ D+R LIK GVIK P KG + +
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 63 ARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRM 122
+++RH Q++KGR RG G RKG TAR+ KE W+ IR +R+ LR L++++ IDR+TYR
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRR 123
Query: 123 LYIRAKGGQFKSKHQLYMFLEEHNLL 148
LY+ AKGG F+ L ++ + L+
Sbjct: 124 LYMLAKGGTFRDLASLKRYMADRGLV 149
>dbj|BAB00084.1| (AB022217) 60S ribosome protein L19-like [Arabidopsis thaliana]
Length = 209
Score = 142 bits (354), Expect = 2e-33
Identities = 67/151 (44%), Positives = 101/151 (66%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+AA ++KCG+ ++W+DP D++ A +R++IR+L+K+G I +KP K SR
Sbjct: 1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR +E K+KGRH G G RKG + AR+ K LW++ +R LR+ L K +E KKIDR Y
Sbjct: 61 SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
+Y++ KG FK+K L + + K R
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAR 151
>pir||T01426 ribosomal protein L19.T2H3.3 - Arabidopsis thaliana
>gi|3377797|gb|AAC28170.1| (AF075597) Similar to 60S
ribosome protein L19; coded for by A. thaliana cDNA
T04719; coded for by A. thaliana cDNA H36046; coded for
by A. thaliana cDNA T44067; coded for by A. thaliana
cDNA T14056; coded for by A. thaliana cDNA R90691
[Arabidopsis th>
Length = 200
Score = 139 bits (348), Expect = 1e-32
Identities = 66/151 (43%), Positives = 101/151 (66%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+A+ +LKCG+ ++W+DP D++ A +R++IR+L+K+G I +KP K SR
Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR + K+KGRH G G RKG + AR+ K LW++ +R LR+ L+K +E KKIDR Y
Sbjct: 61 SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
+Y++ KG FK+K L + + K R
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAR 151
>emb|CAB80716.1| (AL161494) putative ribosomal protein L19 [Arabidopsis thaliana]
Length = 208
Score = 139 bits (348), Expect = 1e-32
Identities = 66/151 (43%), Positives = 101/151 (66%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+A+ +LKCG+ ++W+DP D++ A +R++IR+L+K+G I +KP K SR
Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR + K+KGRH G G RKG + AR+ K LW++ +R LR+ L+K +E KKIDR Y
Sbjct: 61 SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
+Y++ KG FK+K L + + K R
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAR 151
>gb|AAF02889.1|AC009525_23 (AC009525) Putative ribosomal protein L19 [Arabidopsis thaliana]
Length = 214
Score = 139 bits (346), Expect = 2e-32
Identities = 66/151 (43%), Positives = 99/151 (64%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+AA ++KCG+ ++W+DP D++ A +R++IR+L+K+G I +KP K SR
Sbjct: 1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR K KGRH G G RKG + AR+ K LW++ +R LR+ L+K +E KKID+ Y
Sbjct: 61 SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
+Y+R KG FK+K L + + K R
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAR 151
>sp|P36241|RL19_DROME 60S RIBOSOMAL PROTEIN L19 >gi|1079135|pir||A61627 ribosomal protein
L19 - fruit fly (Drosophila melanogaster)
>gi|400448|emb|CAA52784.1| (X74776) ribosomal protein
L19 [Drosophila melanogaster]
Length = 203
Score = 138 bits (345), Expect = 2e-32
Identities = 65/151 (43%), Positives = 101/151 (66%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M +LK+Q+R+AA +L+CG+ ++W+DP ++++A+ +R++IR+LIK+G+I KKPV SR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
YR R E ++K RH G G RKG ARM K LW++ R+ L+K ++ KKIDR Y
Sbjct: 61 YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
LY++ KG FK+K L ++ + K+R
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQR 151
>gi|4506609 ribosomal protein L19 [Homo sapiens] >gi|11525848|ref|XP_008294.1|
ribosomal protein L19 [Homo sapiens]
>gi|132739|sp|P14118|RL19_HUMAN 60S RIBOSOMAL PROTEIN
L19 >gi|71265|pir||R5RT19 ribosomal protein L19,
cytosolic [validated] - rat >gi|477424|pir||A48992
ribosomal protein L19 - human >gi|36128|emb|CAA45090.1|
(X63527) ribosomal protein L19 [Homo sapiens]
>gi|206726|gb|AAA42071.1| (J02650) ribosomal protein L19
[Rattus norvegicus] >gi|298486|gb|AAB25672.1| (S56985)
ribosomal protein L19 [human, breast cancer cell line,
MCF-7, Peptide, 196 aa] [Homo sapiens]
>gi|1154899|emb|CAA57685.1| (X82202) ribosomal protein
L19 [Rattus norvegicus]
Length = 196
Score = 136 bits (340), Expect = 1e-31
Identities = 62/138 (44%), Positives = 95/138 (67%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L++Q+R+A+ +L+CG+ ++W+DP +++A+A +R+ IR+LIK+G+I +KPV SR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
R R ++KGRH G G RKG ARM +K W++ +R LR+ LR+ +E KKIDR Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 121 RMLYIRAKGGQFKSKHQL 138
LY++ KG FK+K L
Sbjct: 121 HSLYLKVKGNVFKNKRIL 138
>gi|6677773 ribosomal protein L19 [Mus musculus]
>gi|132741|sp|P22908|RL19_MOUSE 60S RIBOSOMAL PROTEIN
L19 >gi|91271|pir||A36554 ribosomal protein L19 - mouse
>gi|198643|gb|AAB48630.1| (M62952) Mus musculus
ribosomal protein L19
Length = 196
Score = 136 bits (340), Expect = 1e-31
Identities = 62/138 (44%), Positives = 95/138 (67%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L++Q+R+A+ +L+CG+ ++W+DP +++A+A +R+ IR+LIK+G+I +KPV SR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
R R ++KGRH G G RKG ARM +K W++ +R LR+ LR+ +E KKIDR Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 121 RMLYIRAKGGQFKSKHQL 138
LY++ KG FK+K L
Sbjct: 121 HSLYLKVKGNVFKNKRIL 138
>pdb|1FFK|M Chain M, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 148
Score = 134 bits (334), Expect = 5e-31
Identities = 66/143 (46%), Positives = 94/143 (65%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
L Q+R+AA++L G+NR+W +PER D+A AITRED+R L+ EG I+ K KG SR RA
Sbjct: 3 LSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRA 62
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
R R +++ KG +G GSRKGK AR KE W IRA R +LR+L+++ + YR L
Sbjct: 63 RERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDL 122
Query: 124 YIRAKGGQFKSKHQLYMFLEEHN 146
Y +A GG+F S L +++ ++
Sbjct: 123 YDKAGGGEFDSVADLERYIDANH 145
>sp|P14119|RL19_HALMA 50S RIBOSOMAL PROTEIN L19E (HMAL19) (HL24) >gi|71268|pir||R5HSH4
ribosomal protein L19.eR [validated] - Haloarcula
marismortui >gi|48866|emb|CAA41289.1| (X58395) ribosomal
protein [Haloarcula marismortui]
>gi|228189|prf||1718307F ribosomal protein HL24
[Haloarcula marismortui]
Length = 149
Score = 132 bits (330), Expect = 1e-30
Identities = 66/146 (45%), Positives = 94/146 (64%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L Q+R+AA++L G+NR+W +PER D+A AITRED+R L+ EG I+ K KG SR
Sbjct: 1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR R +++ G +G GSRKGK AR KE W IRA R +LR+L+++ + Y
Sbjct: 61 GRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEHN 146
R LY +A GG+F S L +++ ++
Sbjct: 121 RDLYDKAGGGEFDSVADLERYIDANH 146
>sp|P05734|RL19_SCHPO 60S RIBOSOMAL PROTEIN L19 (YL15) >gi|7490052|pir||T40542 ribosomal
protein L19 - fission yeast (Schizosaccharomyces pombe)
>gi|3116132|emb|CAA18881.1| (AL023288) 60s ribosomal
protein, L19 [Schizosaccharomyces pombe]
>gi|3201578|dbj|BAA28752.1| (AB015169) ribosomal protein
L19 homolog [Schizosaccharomyces pombe]
Length = 193
Score = 132 bits (330), Expect = 1e-30
Identities = 60/138 (43%), Positives = 91/138 (65%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L+ Q+R+AA +LKCG+ ++W+DP + ++++A +R+++R+LIK+G++ +KP SR
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
+R R H K+ GRH G G RKG ARM +W++ R LR+ LRK +E KID+ Y
Sbjct: 61 FRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLY 120
Query: 121 RMLYIRAKGGQFKSKHQL 138
LY+ AKG FK K L
Sbjct: 121 HTLYLEAKGNTFKHKRAL 138
>pir||T41071 60S ribosomal protein L19 - fission yeast (Schizosaccharomyces
pombe) >gi|3560168|emb|CAA20680.1| (AL031525) 60S
ribosomal protein L19B [Schizosaccharomyces pombe]
Length = 193
Score = 132 bits (330), Expect = 1e-30
Identities = 60/138 (43%), Positives = 91/138 (65%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L+ Q+R+AA +LKCG+ ++W+DP + ++++A +R++IR+L+K+G++ +KP SR
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
+R R H K+ GRH G G RKG ARM +W++ R LR+ LRK +E KID+ Y
Sbjct: 61 FRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLY 120
Query: 121 RMLYIRAKGGQFKSKHQL 138
LY+ AKG FK K L
Sbjct: 121 HTLYLEAKGNTFKHKRAL 138
>pir||T43307 ribosomal protein L19 - fission yeast (Schizosaccharomyces pombe)
(fragment) >gi|2760155|dbj|BAA24181.1| (AB010048)
ribosomal protein L19 [Schizosaccharomyces pombe]
Length = 186
Score = 127 bits (316), Expect = 6e-29
Identities = 57/131 (43%), Positives = 87/131 (65%)
Query: 8 RRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRH 67
+R+AA +LKCG+ ++W+DP + ++++A +R++IR+L+K+G++ +KP SR+R R H
Sbjct: 1 KRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTH 60
Query: 68 EQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRA 127
K+ GRH G G RKG ARM +W++ R LR+ LRK +E KID+ Y LY+ A
Sbjct: 61 AAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEA 120
Query: 128 KGGQFKSKHQL 138
KG FK K L
Sbjct: 121 KGNTFKHKRAL 131
>gb|AAG19954.1| (AE005077) 50S ribosomal protein L19E; Rpl19e [Halobacterium sp.
NRC-1]
Length = 149
Score = 126 bits (313), Expect = 1e-28
Identities = 62/145 (42%), Positives = 92/145 (62%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L Q+R+AA++L GENR+W DP+ ++A AITREDIR L+ +G I + +G SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
RAR R ++ G +G GSRKGK AR +K ++ IRA R++LR+L++ + Y
Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQY 120
Query: 121 RMLYIRAKGGQFKSKHQLYMFLEEH 145
R +Y A GG+F S +L ++EE+
Sbjct: 121 REMYNMANGGEFDSVRRLTNYVEEN 145
>sp|O05639|RL19_SULAC 50S RIBOSOMAL PROTEIN L19E >gi|2052264|emb|CAA69095.1| (Y07778)
ribosomal protein L19E [Sulfolobus acidocaldarius]
Length = 150
Score = 125 bits (310), Expect = 3e-28
Identities = 64/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M ++QRR+AA++ G N I +PER+++V A+TREDI++LIKE + P +G S
Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISS 60
Query: 61 YRARIR-HEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRT 119
R + R H+++ KG R GSRKGK AR G KE+WI IR +R+ +R L++ ID+ T
Sbjct: 61 GRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHT 120
Query: 120 YRMLYIRAKGGQFKSKHQLYMFLEE 144
YR+LY RAKG FK+ + +L +
Sbjct: 121 YRLLYKRAKGNYFKNLSDVKSYLRQ 145
>gi|6319444 Ribosomal protein L19B (YL14) (L23B) (rpl5L); Rpl19bp
[Saccharomyces cerevisiae] >gi|6319559|ref|NP_009641.1|
Ribosomal protein L19A (L23A) (rpl5L) (YL14); Rpl19ap
[Saccharomyces cerevisiae]
>gi|585870|sp|P05735|RL19_YEAST 60S RIBOSOMAL PROTEIN
L19 (L23) (YL14) (RP33) (RP15L) >gi|625515|pir||S44597
ribosomal protein L19.e, cytosolic - yeast
(Saccharomyces cerevisiae) >gi|431845|dbj|BAA04155.1|
(D17337) ribosomal protein YL14 [Saccharomyces
cerevisiae] >gi|431846|dbj|BAA04156.1| (D17338)
ribosomal protein YL14 [Saccharomyces cerevisiae]
>gi|531747|emb|CAA85322.1| (Z36751) ribosomal protein
YL19 [Saccharomyces cerevisiae]
>gi|536029|emb|CAA84846.1| (Z35788) ORF YBL027w
[Saccharomyces cerevisiae] >gi|559805|gb|AAB60318.1|
(U16015) ribosomal protein YL19 [Saccharomyces
cerevisiae] >gi|1870098|emb|CAA85030.1| (Z35953) ORF
YBR084c-a [Saccharomyces cerevisiae]
>gi|1870099|emb|CAA85032.1| (Z35954) ORF YBR084c-a
[Saccharomyces cerevisiae]
Length = 189
Score = 118 bits (294), Expect = 2e-26
Identities = 55/138 (39%), Positives = 85/138 (60%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L+ Q+R+AA ++ G+ ++W+DP ++A A +R IR+L+K G I KK V S+
Sbjct: 1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
R R + K++GRH G G RKG + AR+ + +WI+ +R LR+ L K ++ KID+ Y
Sbjct: 61 SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY 120
Query: 121 RMLYIRAKGGQFKSKHQL 138
+LY +KG FK K L
Sbjct: 121 HVLYKESKGNAFKHKRAL 138
>pir||A56846 ribosomal protein L19 - rat
Length = 196
Score = 118 bits (293), Expect = 3e-26
Identities = 53/117 (45%), Positives = 83/117 (70%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
M L++Q+R+A+ +L+CG+ ++W+DP +++A+A +R+ IR+LIK+G+I +KPV SR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDR 117
R R ++KGRH G G RKG ARM +K W++ +R LR+ LR+ +E KKIDR
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDR 117
>sp|P49693|RL19_ARATH 60S RIBOSOMAL PROTEIN L19
Length = 123
Score = 117 bits (291), Expect = 5e-26
Identities = 53/122 (43%), Positives = 84/122 (68%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
LK+Q+R+ + +LKCG+ ++W+DP D++ A +R++IR+L+K+G I +KP K SR RA
Sbjct: 1 LKLQKRLRSSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRA 60
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
R + K+KGRH G G R G + AR+ K LW++ +R LR+ L+K +E KKID+ +
Sbjct: 61 RQLNIAKRKGRHSGYGKRNGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMSMTM 120
Query: 124 YI 125
Y+
Sbjct: 121 YM 122
>emb|CAA54504.1| (X77291) ribosomal protein L19 [Saccharomyces cerevisiae]
Length = 189
Score = 117 bits (290), Expect = 7e-26
Identities = 54/135 (40%), Positives = 84/135 (62%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
L+ Q+R+AA ++ G+ ++W+DP ++A A +R IR+L+K G I KK V S+ R
Sbjct: 4 LRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRT 63
Query: 64 RIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRML 123
R + K++GRH G G RKG + AR+ + +WI+ +R LR+ L K ++ KID+ Y +L
Sbjct: 64 RAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVL 123
Query: 124 YIRAKGGQFKSKHQL 138
Y +KG FK K L
Sbjct: 124 YKESKGNAFKHKRAL 138
>emb|CAC12377.1| (AL445067) probable 50S ribosomal protein L19 [Thermoplasma
acidophilum]
Length = 149
Score = 116 bits (289), Expect = 9e-26
Identities = 63/141 (44%), Positives = 86/141 (60%)
Query: 8 RRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRH 67
+R+ A++ G +R++ID +VD V A TR+D+ L+K+ VIK K KG S R + R
Sbjct: 7 KRIVADIKGVGTSRVYIDTNKVDRVMEAATRQDVIALMKQDVIKIKQKKGISNGRLKKRI 66
Query: 68 EQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRA 127
+Q K R RGPGS +G K AR +K+ WI TIRALR ELR LK + KI + TYR Y
Sbjct: 67 KQLSKDRRRGPGSLRGTKYARYPRKDRWIDTIRALRDELRTLKSEGKITKETYRKYYRFI 126
Query: 128 KGGQFKSKHQLYMFLEEHNLL 148
K G +S+ QL L+ L+
Sbjct: 127 KSGSIRSRSQLLSHLKSAGLV 147
>sp|Q9UX89|RL19_SULSO 50S RIBOSOMAL PROTEIN L19E >gi|6015776|emb|CAB57603.1| (Y18930)
ribosomal protein L19 (HMAL19) [Sulfolobus solfataricus]
Length = 151
Score = 111 bits (274), Expect = 5e-24
Identities = 58/136 (42%), Positives = 86/136 (62%), Gaps = 5/136 (3%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEG---VIKKKPVKG 57
M LK Q+R+AA + G NRI + + ++DV S++TR++IR LIK+G V+KK + G
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG 60
Query: 58 QSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDR 117
R + K +G+ G SRKGKK AR K++W+K +R +R L+ L++ K IDR
Sbjct: 61 GRLKERRKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDR 118
Query: 118 RTYRMLYIRAKGGQFK 133
TYR LY++ KGG +K
Sbjct: 119 HTYRELYLKTKGGNYK 134
>gb|AAK41001.1| LSU ribosomal protein L19E (rpl19E) [Sulfolobus solfataricus]
Length = 151
Score = 111 bits (274), Expect = 5e-24
Identities = 58/136 (42%), Positives = 86/136 (62%), Gaps = 5/136 (3%)
Query: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEG---VIKKKPVKG 57
M LK Q+R+AA + G NRI + + ++DV S++TR++IR LIK+G V+KK + G
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG 60
Query: 58 QSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDR 117
R + K +G+ G SRKGKK AR K++W+K +R +R L+ L++ K IDR
Sbjct: 61 GRLKERRKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDR 118
Query: 118 RTYRMLYIRAKGGQFK 133
TYR LY++ KGG +K
Sbjct: 119 HTYRELYLKTKGGNYK 134
>emb|CAB46824.1| (AJ388522) Ribosomal protein [Canis familiaris]
Length = 113
Score = 98.7 bits (242), Expect = 3e-20
Identities = 49/108 (45%), Positives = 70/108 (64%)
Query: 31 DVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMG 90
++A+A +R+ I +LIK+G+I +KPV SR R R ++KGRH G G RKG ARM
Sbjct: 1 EIANANSRQQILKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMP 60
Query: 91 KKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQL 138
+K W++ +R LR+ L + +E KKIDR Y LY++ KG FK+K L
Sbjct: 61 EKVTWMRRMRILRRLLTRYRESKKIDRHMYHSLYLKVKGNVFKNKRIL 108
>sp|Q08066|RL19_MAIZE 60S RIBOSOMAL PROTEIN L19
Length = 62
Score = 69.1 bits (166), Expect = 2e-11
Identities = 29/61 (47%), Positives = 46/61 (74%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
LK+Q+R+AA LKCG+ ++W+DP V +++ A +R++IR+L+K+G I KKP K SR R
Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRC 60
Query: 64 R 64
+
Sbjct: 61 K 61
>pir||T03648 probable ribosomal protein L19 - maize (fragment)
Length = 63
Score = 69.1 bits (166), Expect = 2e-11
Identities = 29/61 (47%), Positives = 46/61 (74%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
LK+Q+R+AA LKCG+ ++W+DP V +++ A +R++IR+L+K+G I KKP K SR R
Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRC 60
Query: 64 R 64
+
Sbjct: 61 K 61
>gb|AAA18552.1| (M95065) putative ribosomal protein L19 [Zea mays]
Length = 63
Score = 68.3 bits (164), Expect = 4e-11
Identities = 28/61 (45%), Positives = 46/61 (74%)
Query: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRA 63
+K+Q+R+AA LKCG+ ++W+DP V +++ A +R++IR+L+K+G I KKP K SR R
Sbjct: 1 MKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRC 60
Query: 64 R 64
+
Sbjct: 61 K 61
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.137 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53880375
Number of Sequences: 2977
Number of extensions: 2060783
Number of successful extensions: 8771
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8728
Number of HSP's gapped (non-prelim): 38
length of query: 151
length of database: 189,106,746
effective HSP length: 55
effective length of query: 96
effective length of database: 156,189,961
effective search space: 14994236256
effective search space used: 14994236256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 161 (67.1 bits)