BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2166 (PAB2166) DE:Hypothetical protein
         (217 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75219 hypothetical protein PAB2166 - Pyrococcus abyssi (st...   426  e-119
pir||B71203 hypothetical protein PH1895 - Pyrococcus horikoshii ...   397  e-110

>pir||G75219 hypothetical protein PAB2166 - Pyrococcus abyssi (strain Orsay)
           >gi|5457715|emb|CAB49206.1| (AJ248283) hypothetical
           protein [Pyrococcus abyssi]
           Length = 217
           
 Score =  426 bits (1084), Expect = e-119
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MEGSQTNQLVNKFVISLPEGKILGYATDINVEVSGDQFYFILKMKVLENLSRGEFHPGMF 60
           MEGSQTNQLVNKFVISLPEGKILGYATDINVEVSGDQFYFILKMKVLENLSRGEFHPGMF
Sbjct: 1   MEGSQTNQLVNKFVISLPEGKILGYATDINVEVSGDQFYFILKMKVLENLSRGEFHPGMF 60

Query: 61  SSEKKIKIKPSDIVNVGPDVIILGGGKVPPLREIERLGQVVEEYNSLVKELEKKEEEIKR 120
           SSEKKIKIKPSDIVNVGPDVIILGGGKVPPLREIERLGQVVEEYNSLVKELEKKEEEIKR
Sbjct: 61  SSEKKIKIKPSDIVNVGPDVIILGGGKVPPLREIERLGQVVEEYNSLVKELEKKEEEIKR 120

Query: 121 LREEKEKIERELEELKRKVRRLEVLEDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI 180
           LREEKEKIERELEELKRKVRRLEVLEDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI
Sbjct: 121 LREEKEKIERELEELKRKVRRLEVLEDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI 180

Query: 181 DNIKANVETLLSGYLEDVIRKIVNDELNARGLKRTPI 217
           DNIKANVETLLSGYLEDVIRKIVNDELNARGLKRTPI
Sbjct: 181 DNIKANVETLLSGYLEDVIRKIVNDELNARGLKRTPI 217


>pir||B71203 hypothetical protein PH1895 - Pyrococcus horikoshii
           >gi|3258334|dbj|BAA31017.1| (AP000007) 217aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 217
           
 Score =  397 bits (1010), Expect = e-110
 Identities = 191/217 (88%), Positives = 213/217 (98%)

Query: 1   MEGSQTNQLVNKFVISLPEGKILGYATDINVEVSGDQFYFILKMKVLENLSRGEFHPGMF 60
           ME +QTNQLVNKF+ISLPEGKILGY TDINVEVSGDQ+YFIL++K LEN+SRGEFHPGMF
Sbjct: 1   MESNQTNQLVNKFLISLPEGKILGYVTDINVEVSGDQYYFILRIKTLENISRGEFHPGMF 60

Query: 61  SSEKKIKIKPSDIVNVGPDVIILGGGKVPPLREIERLGQVVEEYNSLVKELEKKEEEIKR 120
           SSEKKIKIKPSDIVNVGPDVII+GGGKVPPLREIERLGQ+VE+YN+LVKELEK+E EIK+
Sbjct: 61  SSEKKIKIKPSDIVNVGPDVIIIGGGKVPPLREIERLGQIVEDYNALVKELEKRENEIKK 120

Query: 121 LREEKEKIERELEELKRKVRRLEVLEDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI 180
           L+EEKEK+ERELEELK+K+RRLEV+EDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI
Sbjct: 121 LKEEKEKLERELEELKKKIRRLEVIEDDFDHLKEQLIKQEGQLEMAREYIKLLEGVRHDI 180

Query: 181 DNIKANVETLLSGYLEDVIRKIVNDELNARGLKRTPI 217
           DNIKAN+ETLLSGY+EDV+RKIVNDELNARGLK++PI
Sbjct: 181 DNIKANIETLLSGYIEDVVRKIVNDELNARGLKKSPI 217


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.315    0.139    0.370 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80145265
Number of Sequences: 2977
Number of extensions: 3637302
Number of successful extensions: 66999
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66983
Number of HSP's gapped (non-prelim): 2
length of query: 217
length of database: 189,106,746
effective HSP length: 59
effective length of query: 158
effective length of database: 153,796,013
effective search space: 24299770054
effective search space used: 24299770054
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 163 (67.9 bits)