BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2167 (PAB2167) DE:Hypothetical protein
(219 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75219 hypothetical protein PAB2167 - Pyrococcus abyssi (st... 428 e-119
pir||H71136 hypothetical protein PH0860 - Pyrococcus horikoshii ... 143 2e-33
pir||A75032 hypothetical protein PAB1558 - Pyrococcus abyssi (st... 129 4e-29
pir||D71165 hypothetical protein PH0521 - Pyrococcus horikoshii ... 126 2e-28
pir||E71165 hypothetical protein PH0522 - Pyrococcus horikoshii ... 118 7e-26
pir||B75088 hypothetical protein PAB1639 - Pyrococcus abyssi (st... 91 8e-18
pir||C71056 hypothetical protein PH1145 - Pyrococcus horikoshii ... 90 2e-17
pir||C75213 hypothetical protein PAB0156 - Pyrococcus abyssi (st... 90 2e-17
pir||C71249 hypothetical protein PH0250 - Pyrococcus horikoshii ... 85 5e-16
pir||A75088 hypothetical protein PAB1640 - Pyrococcus abyssi (st... 80 2e-14
pir||B71056 hypothetical protein PH1144 - Pyrococcus horikoshii ... 79 5e-14
pir||F71116 hypothetical protein PH0701 - Pyrococcus horikoshii ... 77 2e-13
pir||C75158 hypothetical protein PAB2065 - Pyrococcus abyssi (st... 74 2e-12
>pir||E75219 hypothetical protein PAB2167 - Pyrococcus abyssi (strain Orsay)
>gi|5457713|emb|CAB49204.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 219
Score = 428 bits (1089), Expect = e-119
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 METPENVSLHIMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRV 60
METPENVSLHIMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRV
Sbjct: 1 METPENVSLHIMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRV 60
Query: 61 YRIQLELLGLDPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHE 120
YRIQLELLGLDPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHE
Sbjct: 61 YRIQLELLGLDPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHE 120
Query: 121 NIVTIVLGLEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLL 180
NIVTIVLGLEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLL
Sbjct: 121 NIVTIVLGLEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLL 180
Query: 181 EEIATTVIKTKIEDFKIVLRIPKSVDRELRRKTFKIEHV 219
EEIATTVIKTKIEDFKIVLRIPKSVDRELRRKTFKIEHV
Sbjct: 181 EEIATTVIKTKIEDFKIVLRIPKSVDRELRRKTFKIEHV 219
>pir||H71136 hypothetical protein PH0860 - Pyrococcus horikoshii
>gi|3257271|dbj|BAA29954.1| (AP000003) 221aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 221
Score = 143 bits (357), Expect = 2e-33
Identities = 77/206 (37%), Positives = 122/206 (58%), Gaps = 1/206 (0%)
Query: 11 IMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLGL 70
+ + KFGE +L E++S +Y ++KWAR +GY ++I+DI D+L +Y Q E+LG+
Sbjct: 7 LFEKSKFGELILFEYNSTTPLLFIVYPLIKWAREKGYPLVIFDIFDSLTIYTKQAEMLGI 66
Query: 71 DPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVTIVLGLE 130
+ E A ++K GGR +GN++ ++S + EK E E + EN+++IVLG E
Sbjct: 67 KDKLYEGANIVKIGGRMNLGNIILKISIIEYGPFEKTLEDTLEKAYGERENVISIVLGTE 126
Query: 131 KLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIKT 190
K+F + M N + +GDRRR Y VNVD+++ +P + PLLEE TTV+K
Sbjct: 127 KIFSFYPFRDQFM-FSNFLALKTGDRRRKAFYFVNVDLLEKISPPMGPLLEEEFTTVVKL 185
Query: 191 KIEDFKIVLRIPKSVDRELRRKTFKI 216
ED KI +++ KS++ EL K+
Sbjct: 186 TKEDNKIKMKVIKSLNPELDGMELKV 211
>pir||A75032 hypothetical protein PAB1558 - Pyrococcus abyssi (strain Orsay)
>gi|5458663|emb|CAB50150.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 209
Score = 129 bits (320), Expect = 4e-29
Identities = 68/181 (37%), Positives = 106/181 (57%), Gaps = 3/181 (1%)
Query: 11 IMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLGL 70
I + +KFGE L+E+DS P L+ +L W+ +GY+++I+D+ D+L VYR ELLG
Sbjct: 5 IFNGIKFGEIALIEYDSNTTPVYVLHSLLSWSEEKGYKIVIFDVFDSLIVYRKMAELLGF 64
Query: 71 DPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVTIVLGLE 130
D S+ + AKV+K GGR GNVV +L+ EK E+ E + D + I LG E
Sbjct: 65 DTSLCKKAKVVKVGGRVNEGNVVMKLTVTEYGPFEKVLEEAIEQVYED--KTIVIPLGTE 122
Query: 131 KLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIKT 190
K+ L ++ ++ N + GD+R+ + +N D+VK P ++P+LEE TTV++
Sbjct: 123 KVLSLYPFREQ-LSFTNFLALRVGDKRKKAFHFINTDLVKAVAPQILPMLEESFTTVMRL 181
Query: 191 K 191
K
Sbjct: 182 K 182
>pir||D71165 hypothetical protein PH0521 - Pyrococcus horikoshii
>gi|3256926|dbj|BAA29609.1| (AP000002) 226aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 226
Score = 126 bits (314), Expect = 2e-28
Identities = 68/206 (33%), Positives = 122/206 (59%), Gaps = 3/206 (1%)
Query: 5 ENVSLHIMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQ 64
E+ ++ + KFGE++L+E +S P G+Y ++ WA+ +GY +++ D+LDTL++Y
Sbjct: 3 ESPVANLWEKTKFGESILIEFNSVSFPSFGVYSLINWAKEKGYNIVVVDVLDTLKIYMGH 62
Query: 65 LELLGLDPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVT 124
++ GLD I++ VIK GGR +G ++ R+ + E E ++ +++ + E +
Sbjct: 63 EKIAGLDTGIIDDVTVIKIGGRIEIGKILARILITEEKLLENELTRLCKEIKK--EKTII 120
Query: 125 IVLGLEK-LFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEI 183
I+LG+EK L L S D+++L+N IL G+ + + Y +NVD++ V+ LLEE
Sbjct: 121 IILGIEKVLSLYSTYTLDVLSLINFILSFIGEEWKKSFYFINVDMMSHLPFPVLQLLEEF 180
Query: 184 ATTVIKTKIEDFKIVLRIPKSVDREL 209
ATTVIK + + + K+++ EL
Sbjct: 181 ATTVIKIVKKGSVLHYTVLKALNVEL 206
>pir||E71165 hypothetical protein PH0522 - Pyrococcus horikoshii
>gi|3256927|dbj|BAA29610.1| (AP000002) 248aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 248
Score = 118 bits (292), Expect = 7e-26
Identities = 68/180 (37%), Positives = 106/180 (58%), Gaps = 3/180 (1%)
Query: 11 IMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLGL 70
I KFGE++L+E DS +G+Y + WAR +G++V + D+LDTL++Y +++GL
Sbjct: 29 IWKGTKFGESVLMEFDSLSFSPLGVYSLAYWARMKGFKVSVVDVLDTLKIYLSYAKMIGL 88
Query: 71 DPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVTIVLGLE 130
SI +VIK GGR GNV R+ V EKE K+ D+E + IVLG+E
Sbjct: 89 GTSIANDIEVIKLGGRIDSGNVSTRIPITEEKVMEKELMKLYPH--EDNEKTIVIVLGIE 146
Query: 131 K-LFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIK 189
K L L + DI++ LN +L G+ + Y +NVD++K + + +LEE++TTV++
Sbjct: 147 KFLALWCKLLPDILSFLNFMLSFVGEEWMKSFYFINVDLMKDFSFPALSMLEELSTTVVE 206
>pir||B75088 hypothetical protein PAB1639 - Pyrococcus abyssi (strain Orsay)
>gi|5458519|emb|CAB50007.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 215
Score = 91.3 bits (223), Expect = 8e-18
Identities = 67/207 (32%), Positives = 110/207 (52%), Gaps = 5/207 (2%)
Query: 11 IMDNVKFGETLLLEHDSQ-IIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLG 69
++DN+KFGET ++ + S + + L LK++R+ ++I D LD+L + + L +LG
Sbjct: 4 VIDNIKFGETAIVLYPSNSYVRELLLNSALKYSRSNNVPILIDDNLDSLALVQRNLRVLG 63
Query: 70 LDPSIVEYAKVIKEGGRFYVGNVVKRLS-EVGVSVREKEYEKVEEDLARDHENIVTIVLG 128
+D + V+K GG++ VGNVV R+ V + Y + L D + I LG
Sbjct: 64 IDEDFRD-VYVVKTGGKYNVGNVVARVPFHPDPRVYIQLYAEKTSSLKID--GYLNISLG 120
Query: 129 LEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVI 188
+E LF S ++ L+ SI + G+ RR IY +N D ++ + LE +A+TVI
Sbjct: 121 IEDLFSSLTSPHEMYVLILSIQRFLGNTRRKAIYIINEDSLRTVPKEIKFELERLASTVI 180
Query: 189 KTKIEDFKIVLRIPKSVDRELRRKTFK 215
+ + K+ + I KS + EL K FK
Sbjct: 181 RASQDLEKVRITILKSTNIELIGKEFK 207
>pir||C71056 hypothetical protein PH1145 - Pyrococcus horikoshii
>gi|3257562|dbj|BAA30245.1| (AP000005) 221aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 221
Score = 90.1 bits (220), Expect = 2e-17
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 5/211 (2%)
Query: 11 IMDNVKFGETLLLEHDS-QIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLG 69
++D +KFGET +L + I + IL A+ R VII D LD L + L++LG
Sbjct: 7 LLDEIKFGETTILFYPGLSYIREFIILKILNHAKIRNIPVIIDDNLDALSIVSRNLKILG 66
Query: 70 LDPSIVEYAKVIKEGGRFYVGNVVKRLS-EVGVSVREKEYEKVEEDLARDH--ENIVTIV 126
+ A V+K GGR +G ++ R+ V +EY + + ++H E + IV
Sbjct: 67 FAEDFQD-AYVVKTGGRQNIGKIITRVRLHPDPRVYIQEYSENIQRSLKEHRIERFINIV 125
Query: 127 LGLEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATT 186
LG+E LF S ++ L+ +I + GD+RR Y VN + +KV P V L +ATT
Sbjct: 126 LGIEDLFRYLNSPHEVYLLVLAIQRFLGDKRRKAFYIVNENSLKVLPPQVYLELMRVATT 185
Query: 187 VIKTKIEDFKIVLRIPKSVDRELRRKTFKIE 217
+I+ L I KS++ L K +E
Sbjct: 186 IIRAVPNFITANLTIIKSLNPGLIGKEISLE 216
>pir||C75213 hypothetical protein PAB0156 - Pyrococcus abyssi (strain Orsay)
>gi|5457663|emb|CAB49154.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 199
Score = 89.7 bits (219), Expect = 2e-17
Identities = 58/201 (28%), Positives = 115/201 (56%), Gaps = 9/201 (4%)
Query: 9 LHIMDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELL 68
+ I+ K GET+L+E+ Y ++ ARA G V++ DI DT + ++L++
Sbjct: 1 MDILSLFKIGETVLVEYSGTSRVEALFYNLI--ARA-GLPVLVDDIFDTYYEFYVRLKVA 57
Query: 69 GLDPSIVEYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVTIVLG 128
G D + +E A V+K GG +GNVV L+ + E+EY + E + +D + + +VLG
Sbjct: 58 GFDVTPLEDAMVVKMGGSRRIGNVVGELNISKYVISEQEYATIIEKIKKD-KPFLNLVLG 116
Query: 129 LEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVI 188
+ KL +L ++ M ++ + + G + R+ Y +N +V +P ++ LLEE+AT+V+
Sbjct: 117 IHKLIILGSILEN-MNVVKMVSSYVGRKERVAFYFINKGVVNKHSPPILDLLEEVATSVL 175
Query: 189 KTKIEDFKIVLRIPKSVDREL 209
++ + ++++ K++++E+
Sbjct: 176 --EVTERGVIIK--KAINKEI 192
>pir||C71249 hypothetical protein PH0250 - Pyrococcus horikoshii
>gi|3256639|dbj|BAA29322.1| (AP000001) 207aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 207
Score = 85.4 bits (208), Expect = 5e-16
Identities = 58/197 (29%), Positives = 112/197 (56%), Gaps = 10/197 (5%)
Query: 16 KFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLGLDPSIV 75
+ GET+L+E+ + LYYI+ ++ +++ DILDT + +L++ G D + +
Sbjct: 13 RVGETVLVEYSGTSRAELLLYYIVNNSKL---PIVVDDILDTYYEFYTRLKVAGFDVAPL 69
Query: 76 EYAKVIKEGGRFYVGNVVKRLSEVGVSVREKEYEKVEEDLARDHENIVTIVLGLEKLFLL 135
E +VIK GG +G V+ RL+ + E+EY ++ L +D+ ++ VLGL KL LL
Sbjct: 70 ENVQVIKMGGTKDIGRVIGRLNISKYVISEQEYMEIVSQL-KDYP-VINPVLGLHKLILL 127
Query: 136 SQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIKTKIEDF 195
+ ++I ++ + + G R+ Y VN ++++ + ++ LLEE+ T+++ +I D
Sbjct: 128 GNTFENI-NVVKMVSNYVGREERIAFYFVNRNVIEKHSSPILDLLEEVVTSIL--EITDS 184
Query: 196 KIVLRIPKSVDRELRRK 212
I+++ KS+ E+ K
Sbjct: 185 GIIIK--KSIKDEIAGK 199
>pir||A75088 hypothetical protein PAB1640 - Pyrococcus abyssi (strain Orsay)
>gi|5458518|emb|CAB50006.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 219
Score = 80.0 bits (194), Expect = 2e-14
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 12 MDNVKFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLG-- 69
++N +GET+L+E+ S + L ++K R + V+I DILDT +Y + L+G
Sbjct: 9 LENKHYGETVLIENSSILGVEAILLLLIKHYRNKSIPVLIEDILDTFPLYLKHITLMGVK 68
Query: 70 LDPSIVEYAKVIKEGGRFYVGNVVKRLS-----EVGVSVREKEYEKVEEDLARDHENIVT 124
LD S V KV+K GG VGN+ ++ + +S E+++V EN +
Sbjct: 69 LDMSNV---KVMKIGGSEDVGNITSKIKMESDPSMYLSRYGNEFQRVSPQ-----ENFID 120
Query: 125 IVLGLEKLFLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIA 184
IVLG ++LF+L + M +L + ++ + RL Y V +++ +P + +LE +A
Sbjct: 121 IVLGFDRLFVLDSASSLTMEVLKAAKSYTLRKNRLAFYIVEKGMLENLSPSPLVILENLA 180
Query: 185 TTVIKTKIEDFKIVLRIPK 203
T+V++ + ++++ K
Sbjct: 181 TSVLELSQDRNLLIIKFLK 199
>pir||B71056 hypothetical protein PH1144 - Pyrococcus horikoshii
>gi|3257561|dbj|BAA30244.1| (AP000005) 218aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 218
Score = 78.8 bits (191), Expect = 5e-14
Identities = 62/191 (32%), Positives = 98/191 (50%), Gaps = 7/191 (3%)
Query: 16 KFGETLLLEHDSQIIPGIGLYYILKWARARGYEVIIYDILDTLRVYRIQLELLG--LDPS 73
KFGET+L+E+DS + YIL++A+ V+I DILDT +Y L+L+ LD S
Sbjct: 12 KFGETILVENDSPLGIEALTSYILEYAKQEKLPVLIEDILDTFPIYIKHLKLMNRELDLS 71
Query: 74 IVEYAKVIKEGGRFYVGNVVKRLS-EVGVSVREKEYEKVEEDLARDHENIVTIVLGLEKL 132
V V+K GG +GNVV RL E S+ Y E EN + ++ G+++L
Sbjct: 72 SVN---VMKIGGVEDIGNVVSRLKLESDPSIYISRYT-AEFSRVASKENFIDMIFGVDRL 127
Query: 133 FLLSQSKQDIMALLNSILKHSGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIKTKI 192
F L + +L S+ ++S + RL Y V I++ + LE+I T+V+
Sbjct: 128 FTLDDTGVLTYEILASMKQYSTRKDRLAFYFVEKKIIENIPTNPLLALEDIGTSVLMLNQ 187
Query: 193 EDFKIVLRIPK 203
E ++++ K
Sbjct: 188 ERDILIIKFVK 198
>pir||F71116 hypothetical protein PH0701 - Pyrococcus horikoshii
>gi|3257109|dbj|BAA29792.1| (AP000003) 236aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 236
Score = 76.9 bits (186), Expect = 2e-13
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 12 MDNVKFGETLLLEHDSQIIPG--------------IGLYYILKWARARGYEVIIYDILDT 57
M+ K E +LEH S+I PG Y I+K + R +II DILD
Sbjct: 1 MEETKQFEAKMLEHISRIFPGGIDIIEYESPELTPFLFYLIVKRLKERNSPIIILDILDQ 60
Query: 58 LRVYRIQLELLGLDPSIVEYAKVIKEGGRFYVGNVVKRLS-EVGVSVREKEYEKVEEDLA 116
L V R LEL G+ P I++ ++VIK GG G V++R+ + + ++ + ++L
Sbjct: 61 LHVIRTLLELSGIKPEIIDESEVIKLGGFLKTGKVIERIDVHKDIMILRDKFLRTIQELT 120
Query: 117 RDHENIVTIVLGLEKLFLLSQSK----QDIMALLNSILKHSGDRRRLTIYTVNVDIVKVA 172
++ E+++ I +G EK+ + + + AL+ + GD+R I +N ++
Sbjct: 121 KNREHVILIGIGAEKMVRIYERDPMEFEYFFALIGRAM--LGDKRLSRIIFLNKSLLDKK 178
Query: 173 TPFVIPLLEEIATTVIKTKI 192
T + LEE+A+ V + K+
Sbjct: 179 T---VIELEELASRVFEIKL 195
>pir||C75158 hypothetical protein PAB2065 - Pyrococcus abyssi (strain Orsay)
>gi|5457856|emb|CAB49346.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 218
Score = 73.7 bits (178), Expect = 2e-12
Identities = 52/179 (29%), Positives = 101/179 (56%), Gaps = 10/179 (5%)
Query: 20 TLLLEHDSQIIPGIGLYYILKWARARGYE---VIIYDILDTLRVYRIQLELLGLDPSIVE 76
++L+E+ S+ I G GL+ ILK + + + +II D LD L +++ Q EL+G+D I++
Sbjct: 13 SVLIEYTSRDIIGPGLFRILKSIKEKYGDDAIIIITDFLDALPIHKYQAELIGIDTKIID 72
Query: 77 YAKVIKEGGRFYVGNVVKRLS----EVGVSVREKEYEKVEEDLARDHENIVTIVLGLEKL 132
+ +IK GGR GNV+ ++ V ++ E+ +K+ + + + + I +G+E L
Sbjct: 73 SSAIIKVGGRISSGNVIYKIPISSYPVYKTLYEESLKKLLDGMNPRGKFFINIQIGIEGL 132
Query: 133 FLLSQSKQDIMALLNSILKH--SGDRRRLTIYTVNVDIVKVATPFVIPLLEEIATTVIK 189
+ + K +IM ++ I ++ + DR I +N+D +K + ++P+L I VI+
Sbjct: 133 MNVFERK-EIMEQIHDIGEYIVTKDRDIRDIMFLNIDYLKSRSIDILPMLRTIFPVVIR 190
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.390
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74812632
Number of Sequences: 2977
Number of extensions: 2956863
Number of successful extensions: 8432
Number of sequences better than 1.0e-10: 13
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8408
Number of HSP's gapped (non-prelim): 14
length of query: 219
length of database: 189,106,746
effective HSP length: 56
effective length of query: 163
effective length of database: 155,591,474
effective search space: 25361410262
effective search space used: 25361410262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)