BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2178 (pepq-1) DE:x-pro dipeptidase
(365 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75217 x-pro dipeptidase PAB2178 - Pyrococcus abyssi (strai... 728 0.0
pir||D71204 hypothetical protein PH1902 - Pyrococcus horikoshii ... 681 0.0
emb|CAC11625.1| (AL445064) proline dipeptidase related protein [... 278 8e-74
pir||T46973 X-Pro dipeptidase (EC 3.4.13.9), cobalt dependent [v... 143 3e-33
pir||E75088 cobalt-dependent proline dipeptidase (pepq-2) PAB163... 139 4e-32
pir||G71056 probable X-Pro dipeptidase - Pyrococcus horikoshii >... 139 5e-32
pir||C75134 x-pro aminopeptidase (pepq-3) PAB1781 - Pyrococcus a... 105 7e-22
pir||C70433 probable X-Pro dipeptidase (EC 3.4.13.9) - Aquifex a... 104 1e-21
pir||G72425 hypothetical protein TM0042 - Thermotoga maritima (s... 102 6e-21
dbj|BAB06898.1| (AP001518) prolidase (proline dipeptidase) [Baci... 102 8e-21
sp|Q58216|Y806_METJA HYPOTHETICAL PEPTIDASE MJ0806 >gi|2129355|p... 99 5e-20
gb|AAK40693.1| Prolidase (Xaa-Pro dipeptidase) (pepQ) [Sulfolobu... 96 8e-19
pir||A71089 probable dipeptidase - Pyrococcus horikoshii >gi|325... 93 4e-18
sp|Q10698|YK89_MYCTU PROBABLE DIPEPTIDASE RV2089C >gi|7445465|pi... 93 5e-18
sp|P46545|PEPQ_LACDL XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PR... 90 5e-17
emb|CAA70068.1| (Y08842) aminopeptidase P [Lactococcus lactis] 89 6e-17
sp|O84913|PEPQ_LACHE XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PR... 89 8e-17
emb|CAB07978.1| (Z93944) prolidase [Lactobacillus delbrueckii] 89 1e-16
pir||G69869 Xaa-Pro dipeptidase homolog ykvY - Bacillus subtilis... 88 1e-16
sp|Q9S6S1|PEPQ_LACDE XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PR... 88 1e-16
sp|P54518|YQHT_BACSU PUTATIVE PEPTIDASE IN GCVT-SPOIIIAA INTERGE... 87 3e-16
emb|CAC12166.1| (AL445066) proline dipeptidase related protein [... 86 5e-16
pir||A72750 probable Xaa-Pro dipeptidase APE0526 - Aeropyrum per... 84 2e-15
gb|AAD53120.1|AF176799_2 (AF176799) PepQ [Lactobacillus pentosus] 82 1e-14
dbj|BAB06519.1| (AP001516) Xaa-Pro dipeptidase [Bacillus halodur... 80 4e-14
gb|AAG19202.1| (AE005016) probable peptidase; PepQ1 [Halobacteri... 77 3e-13
pir||H71496 probable aminopeptidase P - Chlamydia trachomatis (s... 74 2e-12
emb|CAB93372.1| (AL357523) putative peptidase [Streptomyces coel... 74 2e-12
gb|AAK40375.1| X-pro aminopeptidase [Sulfolobus solfataricus] 74 3e-12
gb|AAC46293.1| (AF014460) PepQ [Streptococcus mutans] 73 4e-12
pir||B72032 proline dipeptidase CP1058 [imported] - Chlamydophil... 73 4e-12
pir||D75419 proline dipeptidase - Deinococcus radiodurans (strai... 73 4e-12
pir||F72247 methionine aminopeptidase - Thermotoga maritima (str... 72 9e-12
pir||T47008 hypothetical protein [imported] - Yersinia pestis >g... 72 1e-11
sp|P55666|Y4TL_RHISN HYPOTHETICAL HYDROLASE/PEPTIDASE Y4TL >gi|2... 71 3e-11
emb|CAB07979.1| (Z93945) prolidase-related protein [Lactobacillu... 71 3e-11
>pir||B75217 x-pro dipeptidase PAB2178 - Pyrococcus abyssi (strain Orsay)
>gi|5457694|emb|CAB49185.1| (AJ248283) x-pro dipeptidase
[Pyrococcus abyssi]
Length = 365
Score = 728 bits (1858), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MVMDVNKMRGNKEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE 60
MVMDVNKMRGNKEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE
Sbjct: 1 MVMDVNKMRGNKEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE 60
Query: 61 GEPTVLVVKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAY 120
GEPTVLVVKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAY
Sbjct: 61 GEPTVLVVKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAY 120
Query: 121 LIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK 180
LIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK
Sbjct: 121 LIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK 180
Query: 181 SELEIAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYA 240
SELEIAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYA
Sbjct: 181 SELEIAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYA 240
Query: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL
Sbjct: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
Query: 301 AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDK 360
AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDK
Sbjct: 301 AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDK 360
Query: 361 LERVT 365
LERVT
Sbjct: 361 LERVT 365
>pir||D71204 hypothetical protein PH1902 - Pyrococcus horikoshii
>gi|3258344|dbj|BAA31027.1| (AP000007) 365aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 365
Score = 681 bits (1737), Expect = 0.0
Identities = 335/365 (91%), Positives = 353/365 (95%)
Query: 1 MVMDVNKMRGNKEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE 60
MVM NKMRG+K+IFKKRVERFQELL+ENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE
Sbjct: 1 MVMRGNKMRGDKKIFKKRVERFQELLKENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAE 60
Query: 61 GEPTVLVVKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAY 120
GEP VLVVKGEAELFK+RSWIEDVVEYQK EELM TVVKWI++N MKRVGLEFGIERDAY
Sbjct: 61 GEPRVLVVKGEAELFKERSWIEDVVEYQKAEELMLTVVKWIRENEMKRVGLEFGIERDAY 120
Query: 121 LIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK 180
LIFYKIFLRLNP++EVVDILDLTM LRMIKDEWEL+NIRKAGKIALKGMRVAEEEIKPG+
Sbjct: 121 LIFYKIFLRLNPTVEVVDILDLTMKLRMIKDEWELDNIRKAGKIALKGMRVAEEEIKPGR 180
Query: 181 SELEIAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYA 240
+ELEIAAEV RELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENG+VTVVIGTDWNHYYA
Sbjct: 181 TELEIAAEVTRELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGVVTVVIGTDWNHYYA 240
Query: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
NMARTFI+GDPGERVKKAIEVKKEA+KLALEET+VGVPIS VEKKIE FFKERGFG+YHL
Sbjct: 241 NMARTFIIGDPGERVKKAIEVKKEAIKLALEETKVGVPISTVEKKIEQFFKERGFGDYHL 300
Query: 301 AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDK 360
+GYTHGVGLLIEEPPIATIVVPQRA +IQENMVLSIIHPPLMLPEGAIKYENTYIVKKD
Sbjct: 301 SGYTHGVGLLIEEPPIATIVVPQRAAKIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDG 360
Query: 361 LERVT 365
LERVT
Sbjct: 361 LERVT 365
>emb|CAC11625.1| (AL445064) proline dipeptidase related protein [Thermoplasma
acidophilum]
Length = 331
Score = 278 bits (703), Expect = 8e-74
Identities = 135/321 (42%), Positives = 205/321 (63%), Gaps = 3/321 (0%)
Query: 39 LSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQRSWIEDVVEYQKVEELMATVV 98
+S+FIY TG KWLRPSL+IPAEG+PTVL+ GE + F++ +WI++V+ Y +LM VV
Sbjct: 1 MSTFIYITGIKWLRPSLIIPAEGDPTVLLADGEEDGFREMAWIKNVLSYSDGSQLMGEVV 60
Query: 99 KWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENI 158
K++KD K+VG+E+ +ERDA++ FY +F +LN ++EVVDI D+ +++IKD +E++ I
Sbjct: 61 KYLKDLNAKKVGMEYAVERDAFIFFYDLFKKLNRNVEVVDITDILDDIKVIKDRYEIDYI 120
Query: 159 RKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELMLNGSEDPKVYVSV--TPRAHAEPF 216
KAG++ K + ++ G E +IAAE L GSE+P +Y++ PR H+EP
Sbjct: 121 MKAGEVTRKVAAALADLVREGMKETDIAAEAYYMLYKAGSEEPLIYINAGPNPRVHSEPL 180
Query: 217 RDLKVPENGIVTVVIGTDWNHYYANMARTFIVGDPGERVKKAIEVKKEALKLALEETRVG 276
+ + N IVT+ + D++ YY N + T +G+PG+ AI+ EA K+A+E TR G
Sbjct: 181 STVTIRNNSIVTITLDADFSRYYVNKSLTIPIGNPGDTALNAIKCMDEAQKVAVENTRPG 240
Query: 277 VPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSI 336
V +K++ +K+ Y + GY H VGL EE PI TIV R ++ MVL++
Sbjct: 241 TKFIEVMEKLDETYKKYDMLRYRVIGYAHSVGLKPEEMPITTIVPKDRFVEVKPYMVLAL 300
Query: 337 IHPPLMLPE-GAIKYENTYIV 356
H PLM+P G++K E TY+V
Sbjct: 301 GHAPLMIPGIGSVKIEETYVV 321
>pir||T46973 X-Pro dipeptidase (EC 3.4.13.9), cobalt dependent [validated] -
Pyrococcus furiosus (fragment)
>gi|3372642|gb|AAC61259.1| (AF060010) proline
dipeptidase [Pyrococcus furiosus]
Length = 348
Score = 143 bits (357), Expect = 3e-33
Identities = 105/356 (29%), Positives = 182/356 (50%), Gaps = 22/356 (6%)
Query: 16 KKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELF 75
K+R+E+ + + EN+ID I + YF+GT L +I E T+ V + E E+
Sbjct: 2 KERLEKLVKFMDENSIDRVFIAKPVNVYYFSGTSPLGGGYIIVDGDEATLYVPELEYEMA 61
Query: 76 KQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIE 135
K+ S + VV+++K +E + + +K+ GIE + F + E
Sbjct: 62 KEESKLP-VVKFKKFDE----IYEILKNTET------LGIEGTLSYSMVENFKEKSNVKE 110
Query: 136 VVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELML 195
I D+ LR+IK + E+E I KA +IA K + A EEI GK E E+AA+V + +
Sbjct: 111 FKKIDDVIKDLRIIKTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKM 170
Query: 196 NGSEDPKVYVSVTPRAHAEPF-----RDLKVPENGIVTVVIGTDWNHYYANMARTFIVGD 250
NG+E P + ++ H D ++ +V + +G +NHY +++ RT +VG
Sbjct: 171 NGAEKP-AFDTIIASGHRSALPHGVASDKRIERGDLVVIDLGALYNHYNSDITRTIVVGS 229
Query: 251 PGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLL 310
P E+ ++ E+ EA K A+E + G+ ++ KE G+G+Y + HGVGL
Sbjct: 230 PNEKQREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIKEYGYGDYFIHSLGHGVGLE 289
Query: 311 IEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLERVT 365
I E P + T ++E MV++ I P + +P+ G ++ E+T ++ ++ +R+T
Sbjct: 290 IHEWP---RISQYDETVLKEGMVIT-IEPGIYIPKLGGVRIEDTVLITENGAKRLT 341
>pir||E75088 cobalt-dependent proline dipeptidase (pepq-2) PAB1637 - Pyrococcus
abyssi (strain Orsay) >gi|5458522|emb|CAB50010.1|
(AJ248286) cobalt-dependent proline dipeptidase
(pepQ-2) [Pyrococcus abyssi]
Length = 351
Score = 139 bits (348), Expect = 4e-32
Identities = 104/360 (28%), Positives = 174/360 (47%), Gaps = 26/360 (7%)
Query: 14 IFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAE 73
I ++++R E + EN+ID +I + Y +G L ++ T+ V + E E
Sbjct: 3 IMDEKIKRIIEFMNENSIDAVLITKNPNIYYLSGASPLAGGYILVNNDGATLYVPELEYE 62
Query: 74 LFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPS 133
+ K+ S I VE K + V + +K GIE F +
Sbjct: 63 MAKEESKIP--VEKFKRRDDFYKVFEGVK---------VLGIEGSLSYSFVEDLKEKGKI 111
Query: 134 IEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVREL 193
E + D+ +R++K + E++ I KA +IA K + A EE+ GK E EIAA+V +
Sbjct: 112 SEFKKVDDVIKEMRIVKSDEEIKIIEKACEIADKAVMAAIEEVTEGKKEREIAAKVEYLM 171
Query: 194 MLNGSEDPKV-------YVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTF 246
+NG+E P Y S P A D ++ + +V + +G +NHY +++ RT
Sbjct: 172 KMNGAEKPAFDTIIASGYRSALPHGVAS---DKRIEKGDLVVIDLGALYNHYNSDITRTV 228
Query: 247 IVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
+VG P E+ ++ E+ EA K A+E R G+ ++ + KE G+G+Y + HG
Sbjct: 229 VVGSPNEKQREIYEIVLEAQKKAVEAARPGITTKELDSIARNIIKEYGYGDYFIHSLGHG 288
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLERVT 365
VGL I E P V T ++E MV++ I P + +P+ G ++ E+T ++ K R+T
Sbjct: 289 VGLEIHEWP---GVSQYDETVLKEGMVIT-IEPGIYIPKFGGVRIEDTIVITKTGARRLT 344
>pir||G71056 probable X-Pro dipeptidase - Pyrococcus horikoshii
>gi|3257566|dbj|BAA30249.1| (AP000005) 351aa long
hypothetical X-Pro dipeptidase [Pyrococcus horikoshii]
Length = 351
Score = 139 bits (347), Expect = 5e-32
Identities = 103/361 (28%), Positives = 182/361 (49%), Gaps = 26/361 (7%)
Query: 13 EIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEA 72
+I ++V++ E + +N+ID +I + Y +G L ++ T+ V + E
Sbjct: 2 DIMNEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLAGGYILITGESATLYVPELEY 61
Query: 73 ELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNP 132
E+ K+ S I V +++K++E + G+K +G+E + Y ++ + N
Sbjct: 62 EMAKEESNIP-VEKFKKMDEFYKAL------EGIKSLGIESSLP---YGFIEELKKKANI 111
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRE 192
E + D+ +R+IK E E++ I KA +IA K + A EEI GK E E+AA+V
Sbjct: 112 K-EFKKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYL 170
Query: 193 LMLNGSEDPKV-------YVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMART 245
+ +NG+E P Y S P A D ++ +V + +G + HY +++ RT
Sbjct: 171 MKMNGAEKPAFDTIIASGYRSALPHGVAS---DKRIERGDLVVIDLGALYQHYNSDITRT 227
Query: 246 FIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTH 305
+VG P E+ K+ E+ EA K A+E + G+ ++ + E G+GEY H
Sbjct: 228 IVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFNHSLGH 287
Query: 306 GVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLERV 364
GVGL + E P V T ++E MV++ I P + +P+ G ++ E+T ++ K+ +R+
Sbjct: 288 GVGLEVHEWP---RVSQYDETVLREGMVIT-IEPGIYIPKIGGVRIEDTILITKNGSKRL 343
Query: 365 T 365
T
Sbjct: 344 T 344
>pir||C75134 x-pro aminopeptidase (pepq-3) PAB1781 - Pyrococcus abyssi (strain
Orsay) >gi|5458299|emb|CAB49788.1| (AJ248285) X-pro
aminopeptidase (pepQ-3) [Pyrococcus abyssi]
Length = 355
Score = 105 bits (260), Expect = 7e-22
Identities = 101/356 (28%), Positives = 163/356 (45%), Gaps = 34/356 (9%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWL----RPSLLI-PAEGEPTVLVVKGEA 72
R++RF +LL E N DGA I S+ Y TG K RP++L+ A+GE +L +
Sbjct: 2 RIDRFVKLLNEMNFDGAFISPGSNLYYLTGLKLHEVGERPTILVVSADGEYKLLAPSLYS 61
Query: 73 EL---FKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLR 129
+ F W + Y K+ ++ + + R +E + D + K+
Sbjct: 62 NVITNFPVTFWRDGENPYAKLSTILGELKLY-----RGRFLVEDTMRADWLIGILKL--- 113
Query: 130 LNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIK---PGKSELEIA 186
+ E + L +RM KD E+EN++ A +IA K V EE + G SE E+A
Sbjct: 114 --GNFEFHPLSSLIRLMRMRKDREEIENMKHAARIADK---VFEEILSWDILGMSEKELA 168
Query: 187 AEV---VRELMLNGSEDPKVYVSV-TPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANM 242
++ +REL S P V + H EP + K+ + IV + G W Y +++
Sbjct: 169 LKIEVRIRELSDGVSFSPIVASGENSANPHHEP-GERKIRKGDIVILDYGARWRGYCSDI 227
Query: 243 ARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAG 302
RT VG P E++ + E+ KEA + A R G+ V+K E G+GEY
Sbjct: 228 TRTIAVGRPDEKLIEVYEIVKEAQEKAYRAVREGIKAKEVDKVAREVISEAGYGEYFTHR 287
Query: 303 YTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVK 357
HG+GL + E P + P ++ M + I P + +P G ++ E+ +V+
Sbjct: 288 TGHGLGLDVHEEP---YIGPDGEVTLENGMTFT-IEPGIYIPGLGGVRIEDDVVVE 339
>pir||C70433 probable X-Pro dipeptidase (EC 3.4.13.9) - Aquifex aeolicus
>gi|2983896|gb|AAC07447.1| (AE000744) xaa-pro
dipeptidase [Aquifex aeolicus]
Length = 354
Score = 104 bits (258), Expect = 1e-21
Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQ 77
+V+ QEL++E N+D + + + Y + + +I + E +L E K
Sbjct: 2 KVKEVQELIKEKNLDAFMFSSQPNVFYLSRFRSTNAYAVITPQ-EKYLLTDARYYERAKN 60
Query: 78 RSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVV 137
+ +VV + L +V ++++ G+K VG E D +K L+ + I V
Sbjct: 61 QLKDWEVVLIKG--NLFKSVKNFLREKGLKYVGYE----EDRVSCTFKKHLK-SKHIRWV 113
Query: 138 DILDLTMSLRMIKDEWEL----ENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVREL 193
+ ++R++K + E+ E +RK+ KI R +KPG +EL++ +V ++
Sbjct: 114 GFSNFLKNVRVLKTKEEISIMKEGVRKSDKI----YRELLNFVKPGMTELQVRGFIVSKI 169
Query: 194 MLNGSED---PKVYVSVTPRA--HAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTFIV 248
E P + S A H E R+ K+ EN + + +G W Y + RTF +
Sbjct: 170 FEKNGEGESFPAIVASGEHSAVPHWESSRE-KIKENAPLLIDMGLLWEGYCTDFTRTFHI 228
Query: 249 GDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVG 308
G P E +K E+ KEA ALE+ +VG + V++ + +++G+G++ HGVG
Sbjct: 229 GKPSEEFRKVYEIVKEAHLRALEKAKVGNTVGDVDRAAREYIEKKGYGQFFTHSTGHGVG 288
Query: 309 LLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVK 357
+ I E P T I+E MV + I P + LP + ++ EN V+
Sbjct: 289 VEIHEFPRVYYKGDDAKTPIEEGMVFT-IEPGIYLPGKFGVRLENIVAVQ 337
>pir||G72425 hypothetical protein TM0042 - Thermotoga maritima (strain MSB8)
>gi|4980527|gb|AAD35136.1|AE001691_10 (AE001691)
aminopeptidase P, putative [Thermotoga maritima]
Length = 359
Score = 102 bits (252), Expect = 6e-21
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 18/357 (5%)
Query: 18 RVERFQELLRENNIDGAVIRTL-----SSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEA 72
R ER +L+ E ID +I + +S +YF+G +LI E T L++
Sbjct: 3 RSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSFSIILI---SENTRLLITDSR 59
Query: 73 ELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNP 132
+ + + V K + + + K + D +K + LE ER + +F +I
Sbjct: 60 YTVQAKQETDFEVREVKGGDFIDVLKKTVNDLKIKTIALEE--ERVSLSLFRRISSAFGD 117
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRE 192
+ + I D +RM+KDE E+E I++A +I+ + ++I+ G +E EIAA +
Sbjct: 118 R-KFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYT 176
Query: 193 LMLNGSED---PKVYVSVTPRAHAEPFRDLKVPENGIVTVV-IGTDWNHYYANMARTFIV 248
+ G+E + S A KV E G V V+ G + +Y A++ R +
Sbjct: 177 MRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSI 236
Query: 249 GDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVG 308
G+P + VK+ + EA + AL+ + GV ++ F +E+G+GE+ HG+G
Sbjct: 237 GEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIG 296
Query: 309 LLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDKLERVT 365
L + E P + + + + EN+V ++ + + I+ E ++K+ E +T
Sbjct: 297 LEVHEGPAISF---RNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQGCEILT 350
>dbj|BAB06898.1| (AP001518) prolidase (proline dipeptidase) [Bacillus halodurans]
Length = 364
Score = 102 bits (251), Expect = 8e-21
Identities = 91/363 (25%), Positives = 164/363 (45%), Gaps = 24/363 (6%)
Query: 17 KRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRP-----SLLIPAEGEPTVLVVKGE 71
+R++R E L++N+ A I+ +S Y TG + P SLL+ E EP ++ E
Sbjct: 2 ERIKRVIEWLKDNDHSMAFIQDKTSIFYLTGF-YCDPHERLVSLLLFPEAEPCLICPNME 60
Query: 72 AELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLN 131
L K+ W +++ Y +E+ V + ++ KR + +A + Y L
Sbjct: 61 TSLVKEAGWTGEILGYSDIEDPWLLVRQAVE----KRNAVLTSCIVEAPRLTYARVQALQ 116
Query: 132 ---PSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAE 188
P+I+++D M LR K EL +++A +A G+ V + I+ G+SE+EI A
Sbjct: 117 DAFPAIKLIDGEPFLMELRKQKSAKELTTLKEAAALADYGVEVGVQAIQEGRSEIEILAL 176
Query: 189 VVRELMLNGSEDPKVYVSV-----TPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMA 243
+ EL G D V + H P + + V +G + Y +++
Sbjct: 177 IEYELKRKGVRDMSFGTLVLSGDQSANPHGNP-GQRTIKKGDFVLFDLGVVLDGYCSDIT 235
Query: 244 RTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGY 303
RT ++ + E ++A + AL+ R GV I +++ E G+G+Y
Sbjct: 236 RTVAFHHVTDQQQDIYETVRKAQQAALDACRPGVEIRTLDQIARTIITEAGYGDYFPHRI 295
Query: 304 THGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLE 362
HG+G+ + E P R+Q+ MV + I P + LP G ++ E+ ++ +D +
Sbjct: 296 GHGLGMEVHELPSLN---ETNTDRLQKGMVFT-IEPGIYLPSIGGVRIEDDVVITEDGYQ 351
Query: 363 RVT 365
+T
Sbjct: 352 TLT 354
>sp|Q58216|Y806_METJA HYPOTHETICAL PEPTIDASE MJ0806 >gi|2129355|pir||F64400 X-Pro
dipeptidase (EC 3.4.13.9) - Methanococcus jannaschii
>gi|1591498|gb|AAB98806.1| (U67525) X-pro aminopeptidase
(pepQ) [Methanococcus jannaschii]
Length = 347
Score = 99.5 bits (244), Expect = 5e-20
Identities = 97/362 (26%), Positives = 177/362 (48%), Gaps = 37/362 (10%)
Query: 13 EIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEA 72
+I R+ERF + + I AVI + YF G ++ S+L+ E +P + V K +
Sbjct: 7 DIMNNRIERFLKYMESEGIKKAVILKKENINYFLGKYFMSFSVLV-FEEQPYLYVGKLDK 65
Query: 73 ELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNP 132
+ ++ ++ E++ EE+ G + G+E++ + + K +
Sbjct: 66 DYAEEHFNFLEIREFKSWEEIFK--------------GCD-GVEKELSIGYLKYIDK--- 107
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK--SELEIAAEVV 190
E I D +RMIKD+ E++ I+KA +I+ K + + K +E E+ AE+
Sbjct: 108 --EYKIISDKIKEMRMIKDKEEIKLIKKAAEISDKAINWVLNNLDEVKNLTEYELVAEIE 165
Query: 191 RELMLNGSEDP---KVYVS--VTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMART 245
+ +GS P + VS T HA P +D K+ + I+ V IG + Y +++ RT
Sbjct: 166 YIMKKHGSIKPAFDSIVVSGKKTSFPHALPTKD-KIAD--ILLVDIGAVYEGYCSDITRT 222
Query: 246 FIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTH 305
F++ D E +KK + EA K+A E + G+ ++ + FF + + E + H
Sbjct: 223 FLLKD-DEEMKKIYNLVYEAKKVAEEHLKEGISAKQIDNIVREFFND--YKELFIHSLGH 279
Query: 306 GVGLLI-EEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEG-AIKYENTYIVKKDKLER 363
GVGL + EEP ++ + ++E MV++ I P L L + ++ E+ Y+VKK+ E+
Sbjct: 280 GVGLEVHEEPRLSNKLKDDEDIILKEGMVVT-IEPGLYLKDKFGVRIEDLYLVKKNGFEK 338
Query: 364 VT 365
++
Sbjct: 339 LS 340
>gb|AAK40693.1| Prolidase (Xaa-Pro dipeptidase) (pepQ) [Sulfolobus solfataricus]
Length = 352
Score = 95.6 bits (234), Expect = 8e-19
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 14/348 (4%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQ 77
R+ + + +L + A+I + YF ++ LI + T+LV E +
Sbjct: 3 RLRKLKAILEDKKDSCAIIFGSPNLFYFL--EYSGAGALIYCDSRFTLLVPALEMYRAEN 60
Query: 78 RSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVV 137
++ + Y +++ V++ ++++ + I D + + L+ +V+
Sbjct: 61 VKDVDIAIYYPS--KILENVIEGNIFRAIEKIVNKSNIMLDVSWVEASTYKALSEKYKVI 118
Query: 138 DILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKS-ELEIAAEVVRELMLN 196
D + + LR +KD E+E IRKAG+I M++ E++ G S E ++A + +
Sbjct: 119 DFSNEIVRLREVKDNDEIERIRKAGEITAVAMKIGMEKLSEGTSNEKQVAGIIDMTMRSM 178
Query: 197 GSED---PKVYVSVTPRAHAEPF-RDLKVPENGIVTVVIGTDWNHYYANMARTFIVGDPG 252
G+ED P + A+ D + N IV IG +N Y + RTF+
Sbjct: 179 GAEDYAFPSIVAFGENSAYPHHIPTDRVLGNNDIVLFDIGAKYNGYCFDSTRTFVF--KN 236
Query: 253 ERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLLIE 312
KK EV EA A++ R GV S V+ ++ G+G+Y + HGVG+ I
Sbjct: 237 SEAKKVYEVVLEAQMEAIDAVRDGVMASEVDITARRVIEKAGYGKYFIHSTGHGVGVEIH 296
Query: 313 EPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDK 360
E P ++ Q ++ENM++++ + I+ E+T IV K K
Sbjct: 297 ESPAVSMNSKQ---ILKENMIITVEPGIYLKGRFGIRIEDTLIVTKGK 341
>pir||A71089 probable dipeptidase - Pyrococcus horikoshii
>gi|3257388|dbj|BAA30071.1| (AP000004) 356aa long
hypothetical dipeptidase [Pyrococcus horikoshii]
Length = 356
Score = 93.2 bits (228), Expect = 4e-18
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 28/361 (7%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPS-----LLIPAEGEPTVL---VVK 69
R+E+F LL E DGA+I ++ Y TG + L + AEG+ L + +
Sbjct: 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYE 61
Query: 70 GEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLR 129
F W + Y K+ E++ + R+ +E + D + K+
Sbjct: 62 NVVNNFPATFWHDGENPYAKLREILEEL-----GISKGRILIEDTMRADWLIGIMKL--- 113
Query: 130 LNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEV 189
+ L LRMIKD+ E++ + A +IA K G E E+A ++
Sbjct: 114 --GKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKI 171
Query: 190 ---VRELMLNGSEDPKVYVSVTP-RAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMART 245
+REL + +P V H EP + K+ + I+ + G W Y +++ RT
Sbjct: 172 ELLIRELSDGIAFEPIVASGENAANPHHEP-GERKIRKGDIIILDYGARWKGYCSDITRT 230
Query: 246 FIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTH 305
+G+ ER+ K EV K+A + A + R G+ V+ + + G+GEY + H
Sbjct: 231 IGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIHRTGH 290
Query: 306 GVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLERV 364
G+GL + E P + P ++ M + I P + +P G ++ E+ +V + K R+
Sbjct: 291 GLGLDVHEEP---YIGPDGEVILKNGMTFT-IEPGIYVPGLGGVRIEDDIVVDEGKGRRL 346
Query: 365 T 365
T
Sbjct: 347 T 347
>sp|Q10698|YK89_MYCTU PROBABLE DIPEPTIDASE RV2089C >gi|7445465|pir||D70767 probable pepQ
- Mycobacterium tuberculosis (strain H37RV)
>gi|1370256|emb|CAA98201.1| (Z73966) pepE [Mycobacterium
tuberculosis]
Length = 375
Score = 92.8 bits (227), Expect = 5e-18
Identities = 88/342 (25%), Positives = 151/342 (43%), Gaps = 32/342 (9%)
Query: 9 RGNKEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLR----PSLLIPAEGEPT 64
R + E++ +R+ + + G VI Y G++ +L++PA G P
Sbjct: 5 RFDAEVYARRLALAAAATADAGLAGLVITPGYDLCYLIGSRAETFERLTALVLPAAGAPA 64
Query: 65 VLVVKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIK-DNGMKRVGLEFGIERDAYLIF 123
V++ + E KQ + EL V W+ D+ V G A +
Sbjct: 65 VVLPRLELAALKQSA----------AAELGLRVCDWVDGDDPYGLVSAVLGGAPVATAVT 114
Query: 124 YKI----FLRLNPSIEVVDIL--DLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIK 177
+ L L ++ V+ +L D+ LRM+K+E E++ +RKAG + E +
Sbjct: 115 DSMPALHMLPLADALGVLPVLATDVLRRLRMVKEETEIDALRKAGAAIDRVHARVPEFLV 174
Query: 178 PGKSELEIAAEVVRELMLNG-SEDPKVYVSVTPRAHAEP---FRDLKVPENGIVTVVIGT 233
PG++E ++AA++ ++ G SE V V P A+P + D ++ E IV V IG
Sbjct: 175 PGRTEADVAADIAEAIVAEGHSEVAFVIVGSGPHG-ADPHHGYSDRELREGDIVVVDIGG 233
Query: 234 DWNH-YYANMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKE 292
+ Y+++ RT+ +G+P V ++ + + A + A E R GV V+ E
Sbjct: 234 TYGPGYHSDSTRTYSIGEPDSDVAQSYSMLQRAQRAAFEAIRPGVTAEQVDAAARDVLAE 293
Query: 293 RGFGEYHLAGYTHGVGLLIEEPPIAT-----IVVPQRATRIQ 329
G EY + HG+GL + E P ++VP A I+
Sbjct: 294 AGLAEYFVHRTGHGIGLCVHEEPYIVAGNDLVLVPGMAFSIE 335
>sp|P46545|PEPQ_LACDL XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PROLINE DIPEPTIDASE)
(PROLIDASE) (IMIDODIPEPTIDASE) >gi|1075982|pir||S52202
X-Pro dipeptidase (EC 3.4.13.9) [validated] -
Lactobacillus delbrueckii >gi|609078|emb|CAA84379.1|
(Z34896) prolidase [Lactobacillus delbrueckii]
>gi|1150454|emb|CAA90911.1| (Z54205) prolidase PepQ
[Lactobacillus delbrueckii]
Length = 368
Score = 89.7 bits (219), Expect = 5e-17
Identities = 80/360 (22%), Positives = 161/360 (44%), Gaps = 20/360 (5%)
Query: 19 VERFQELLRENNIDGAVIRTLSSFIYFTG----TKWLRPSLLIPAEGEPTVLVVKGEAEL 74
+++ Q L+EN +D A + + ++ YFTG + L + EP + E
Sbjct: 3 LDKLQNWLQENGMDVAYVSSPTTINYFTGFITDPEERIFKLFAFKDAEPFLFCPALNYEE 62
Query: 75 FKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLI--FYKIFLRLNP 132
K +W DVV Y E+ + + + IK + + +E++ + + + +
Sbjct: 63 AKASAWDGDVVGYLDSEDPWSKIAEEIKKR--TKDYQNWAVEKNGLTVAHYQALHAQFPD 120
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRE 192
S D+ D +R+ K E EL +RKAG+ A ++ E ++ G +E + +++ +
Sbjct: 121 SDFSKDLSDFIAHIRLFKTESELVKLRKAGEEADFAFQIGFEALRNGVTERAVVSQIEYQ 180
Query: 193 LMLNGSEDPKVYVSVTPRA------HAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTF 246
L L + ++ H P + P N +V +GT Y ++ +RT
Sbjct: 181 LKLQKGVMQTSFDTIVQAGKNAANPHQGPSMNTVQP-NELVLFDLGTMHEGYASDSSRTV 239
Query: 247 IVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
G+P +++++ EV + A + A++ + G+ S ++ + G+GEY + HG
Sbjct: 240 AYGEPTDKMREIYEVNRTAQQAAIDAAKPGMTASELDGVARKIITDAGYGEYFIHRLGHG 299
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGA-IKYENTYIVKKDKLERVT 365
+G+ + E P + ++E M S I P + +P A ++ E+ ++ KD + T
Sbjct: 300 IGMEVHEFP---SIANGNDVVLEEGMCFS-IEPGIYIPGFAGVRIEDCGVLTKDGFKPFT 355
>emb|CAA70068.1| (Y08842) aminopeptidase P [Lactococcus lactis]
Length = 352
Score = 89.3 bits (218), Expect = 6e-17
Identities = 76/356 (21%), Positives = 163/356 (45%), Gaps = 22/356 (6%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQ 77
R+E+ + + NID +I + + Y TG ++ + + + ++ +
Sbjct: 2 RIEKLKVKMLTENIDSLLITDMKNIFYLTGFSGTAGTVFLTQKRN----IFMTDSRYSEM 57
Query: 78 RSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVV 137
+ E + + ++ + + +K + E ++ Y F RL+ + +
Sbjct: 58 ARGLIKNFEIIETRDPISLLTELSASESVKNMAFEETVD-------YAFFKRLSKAATKL 110
Query: 138 DIL---DLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEV---VR 191
D+ + + LR IKDE E+ I+KA +IA + A I+PG++E+E+A + +R
Sbjct: 111 DLFSTSNFVLELRQIKDESEISLIKKACEIADEAFMSALRFIEPGRTEIEVANFLDFKMR 170
Query: 192 ELMLNGSEDPKVYVSVTPRAHAEPFRDLKVPENGI-VTVVIGTDWNHYYANMARTFIVGD 250
+L +G + S + K+ + G VT+ G + HY ++M RT VG
Sbjct: 171 DLEASGISFETIVASGKRSSLPHGVATSKMIQFGDPVTIDFGCYYEHYASDMTRTIFVGS 230
Query: 251 PGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLL 310
++++ E ++A + +++ + G+ + + ++ FG+Y G HG+GL
Sbjct: 231 VDDKMRTIYETVRKANEALIKQVKAGMTYAQYDNIPREVIEKADFGQYFTHGIGHGLGLD 290
Query: 311 IEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLERVT 365
+ E P + + +++ MV++ P + LPE G ++ E+ +V ++ E +T
Sbjct: 291 VHEIPYFNQSMTE--NQLRSGMVIT-DEPGIYLPEFGGVRIEDDLLVTENGCEVLT 343
>sp|O84913|PEPQ_LACHE XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PROLINE DIPEPTIDASE)
(PROLIDASE) (IMIDODIPEPTIDASE)
>gi|3282339|gb|AAC24966.1| (AF012084) prolidase
[Lactobacillus helveticus]
Length = 368
Score = 88.9 bits (217), Expect = 8e-17
Identities = 87/363 (23%), Positives = 160/363 (43%), Gaps = 26/363 (7%)
Query: 19 VERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRP-----SLLIPAEGEPTVLVVKGEAE 73
+++ Q+ L+++N D A I + YFTG + P +LL+ + P + E
Sbjct: 3 LDKLQQWLQDSNNDIAYISNPITISYFTGYS-MDPHERIFALLVFKDANPFIFCPALNVE 61
Query: 74 LFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVG--LEFGIERDAYLIFYKIFLRLN 131
K W DV Y E+ + I DN KR + IE+D + + +LR
Sbjct: 62 EAKNSEWNGDVFGYLDSEDPW----ELIADNVRKRTSDTHTWAIEKDDLSVAHYQYLRGE 117
Query: 132 -PSIEVV-DILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEV 189
P+ D+ LR+ K E++ ++ AG A ++ + I+ G +E IA ++
Sbjct: 118 FPNASFTNDVSSFIERLRLYKTPEEIKKLQGAGAEADFAFKIGFDAIRTGVTERSIAGQI 177
Query: 190 VRELMLNGSEDPKVYVSVTPRA------HAEPFRDLKVPENGIVTVVIGTDWNHYYANMA 243
+L + + + ++ H P + P N +V +GT + Y ++ +
Sbjct: 178 DYQLKIQKGVMHESFETIVQAGKNAANPHLGPTMNTVQP-NELVLFDLGTMHDGYASDSS 236
Query: 244 RTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGY 303
RT G P ++ ++ EV +EA + A+E + G+ ++ + G+GEY +
Sbjct: 237 RTVAYGTPSDKQREIYEVDREAQQAAIEAAKPGITAEELDSVARDIITKAGYGEYFIHRL 296
Query: 304 THGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGA-IKYENTYIVKKDKLE 362
HG+G + E P +V ++E M S I P + +P A ++ E+ +V KD +
Sbjct: 297 GHGIGKNVHEYP---SIVQGNDLVLEEGMCFS-IEPGIYIPGFAGVRIEDCGVVTKDGFK 352
Query: 363 RVT 365
T
Sbjct: 353 TFT 355
>emb|CAB07978.1| (Z93944) prolidase [Lactobacillus delbrueckii]
Length = 368
Score = 88.5 bits (216), Expect = 1e-16
Identities = 79/360 (21%), Positives = 159/360 (43%), Gaps = 20/360 (5%)
Query: 19 VERFQELLRENNIDGAVIRTLSSFIYFTG----TKWLRPSLLIPAEGEPTVLVVKGEAEL 74
+++ Q L+EN +D A + + ++ YFTG + L + EP + E
Sbjct: 3 LDKLQNWLQENGMDVAYVSSPTTINYFTGFITDPEERIFKLFAFKDAEPFLFCPALNYEE 62
Query: 75 FKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLI--FYKIFLRLNP 132
K +W DVV Y E+ + + IK + +E++ + + + +
Sbjct: 63 AKASAWDGDVVGYLDSEDPWGKIAEEIKQRSKDYQN--WAVEKNGLTVAHYQALHAQFPD 120
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRE 192
S D+ D +R+ K E EL +RKAG+ A ++ E ++ G +E + +++ +
Sbjct: 121 SDFSKDLSDFIAHIRLFKTESELVKLRKAGEEADFAFQIGFEALRNGVTERAVVSQIEYQ 180
Query: 193 LMLNGSEDPKVYVSVTPRA------HAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTF 246
L L + ++ H P + P N +V +GT Y ++ +RT
Sbjct: 181 LKLQKGVMQTSFDTIVQAGKNAANPHQGPSMNTVQP-NELVLFDLGTMHEGYASDSSRTV 239
Query: 247 IVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
G+P +++++ EV + A + A++ + G+ S ++ + G+GEY + HG
Sbjct: 240 AYGEPTDKMREIYEVNRTAQQAAIDAAKPGMTASELDGVARKIITDAGYGEYFIHRLGHG 299
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGA-IKYENTYIVKKDKLERVT 365
+G+ + E P + ++E M S I P + +P A ++ E+ ++ K+ + T
Sbjct: 300 IGMEVHEFP---SIANGNDVVLEEGMCFS-IEPGIYIPGFAGVRIEDCGVLTKEGFKPFT 355
>pir||G69869 Xaa-Pro dipeptidase homolog ykvY - Bacillus subtilis
>gi|2633757|emb|CAB13259.1| (Z99111) similar to Xaa-Pro
dipeptidase [Bacillus subtilis]
Length = 363
Score = 88.2 bits (215), Expect = 1e-16
Identities = 85/354 (24%), Positives = 152/354 (42%), Gaps = 20/354 (5%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRP-----SLLIPAEGEPTVLVVKGEA 72
R++R L+E A I T + Y TG + P L I E EP + EA
Sbjct: 3 RIQRVSSWLKEAGHTAAFIHTKENVFYLTGF-YTEPHERLMGLFIFQEEEPFFVCPGMEA 61
Query: 73 ELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLR-LN 131
+ W +++ Y E + K +K + L +E+D+ + L+
Sbjct: 62 GQARNAGWNHEIIGYADHENPWELIEKALKKRNISIHML--AVEKDSISLSRAEQLKHAT 119
Query: 132 PSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVR 191
+ V + R+IKD+ E+ +++A K+A G+ V ++ G SE+E+ A++
Sbjct: 120 GGAQFVSAEETLNQFRLIKDDNEIRLLKEAAKLADYGVEVGTAALREGISEVEVLAQIEY 179
Query: 192 ELMLNGSEDPKVYVSV-----TPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTF 246
EL G + V + + H P + + V +G + Y +++ RTF
Sbjct: 180 ELKKKGIQGMSFSTMVLFGEKSGQPHGNP-GTATLKKGDFVLFDLGVILDGYCSDITRTF 238
Query: 247 IVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
+ + E +A K A+E ++ GV I ++ ++ G+G+Y HG
Sbjct: 239 AYKTINPKQEAIYETVLQAEKAAIEASKPGVRIGDLDLTARGIIEKAGYGDYFPHRLGHG 298
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKD 359
+G+ + E P + T +QE MV + I P + +PE G ++ E+ V KD
Sbjct: 299 LGISVHEYPSMS---QANDTLLQEGMVYT-IEPGIYVPEIGGVRIEDDVHVTKD 348
>sp|Q9S6S1|PEPQ_LACDE XAA-PRO DIPEPTIDASE (X-PRO DIPEPTIDASE) (PROLINE DIPEPTIDASE)
(PROLIDASE) (IMIDODIPEPTIDASE)
>gi|3821250|emb|CAA73815.1| (Y13385) proline dipeptidase
[Lactobacillus delbrueckii subsp. bulgaricus]
Length = 368
Score = 88.2 bits (215), Expect = 1e-16
Identities = 79/360 (21%), Positives = 160/360 (43%), Gaps = 20/360 (5%)
Query: 19 VERFQELLRENNIDGAVIRTLSSFIYFTG----TKWLRPSLLIPAEGEPTVLVVKGEAEL 74
+++ Q L+EN +D A + + ++ YFTG + L + EP + E
Sbjct: 3 LDKLQNWLQENGMDVAYVSSPTTINYFTGFITDPEERIFKLFAFKDAEPFLFCPALNYEE 62
Query: 75 FKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLI--FYKIFLRLNP 132
K +W DVV Y E+ + + IK + + +E++ + + + +
Sbjct: 63 AKASAWDGDVVGYLDSEDPWGKIAEEIKQR--TKDYQNWAVEKNGLTVAHYQALHAQFPD 120
Query: 133 SIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRE 192
S D+ D +R+ K E EL +RKAG+ A ++ E ++ G +E + +++ +
Sbjct: 121 SDFSKDLSDFIAHIRLFKTESELVKLRKAGEEADFAFQIGFEALRNGVTERAVVSQIEYQ 180
Query: 193 LMLNGSEDPKVYVSVTPRA------HAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTF 246
L L + ++ H P + P N +V +GT Y ++ +RT
Sbjct: 181 LKLQKGVMQTSFDTIVQAGKNAANPHQGPSMNTVQP-NELVLFDLGTMHEGYASDSSRTV 239
Query: 247 IVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
G+P +++++ EV + A + A++ + G+ S ++ + G+GEY + HG
Sbjct: 240 AYGEPTDKMREIYEVNRTAQQAAIDAAKPGMTASELDGVARKIITDAGYGEYFIHRLGHG 299
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGA-IKYENTYIVKKDKLERVT 365
+G+ + E P + ++E M S I P + +P A ++ E+ ++ K+ + T
Sbjct: 300 IGMEVHEFP---SIANGNDVVLEEGMCFS-IEPGIYIPGFAGVRIEDCGVLTKEGFKPFT 355
>sp|P54518|YQHT_BACSU PUTATIVE PEPTIDASE IN GCVT-SPOIIIAA INTERGENIC REGION
>gi|7430115|pir||C69960 Xaa-Pro dipeptidase homolog yqhT
- Bacillus subtilis >gi|1303901|dbj|BAA12557.1| (D84432)
YqhT [Bacillus subtilis] >gi|2634880|emb|CAB14377.1|
(Z99116) similar to Xaa-Pro dipeptidase [Bacillus
subtilis]
Length = 353
Score = 87.0 bits (212), Expect = 3e-16
Identities = 76/362 (20%), Positives = 161/362 (43%), Gaps = 33/362 (9%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELF-- 75
++E+ + L + IDG +I + ++ Y TG G + V+ G+ F
Sbjct: 2 KLEKLRNLFGQLGIDGMLITSNTNVRYMTGFT-----------GSAGLAVISGDKAAFIT 50
Query: 76 ----KQRSWIEDVVEYQKVEE---LMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFL 128
+++ ++ V ++ +E L+ T ++ G+KR+G E + Y +
Sbjct: 51 DFRYTEQAKVQ-VKGFEIIEHGGSLIQTTADTVESFGIKRLGFE---QNSMTYGTYASYS 106
Query: 129 RLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAE 188
+ E+V + + LR+IK E++ + +A KIA R +KPG SE+ +A E
Sbjct: 107 AVISDAELVPVAESVEKLRLIKSSEEIKILEEAAKIADDAFRHILTFMKPGISEIAVANE 166
Query: 189 VVRELMLNGSEDPKVYVSVTPRAHAE----PFRDLKVPENGIVTVVIGTDWNHYYANMAR 244
+ + G++ + V + D + +VT+ G + Y +++ R
Sbjct: 167 LEFYMRSQGADSSSFDMIVASGLRSSLPHGVASDKLIESGDLVTLDFGAYYKGYCSDITR 226
Query: 245 TFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYT 304
T VG P +++K+ +V +A L + + G+ + +G+G+Y
Sbjct: 227 TVAVGQPSDQLKEIYQVVFDAQALGVAHIKPGMTGKEADALTRDHIAAKGYGDYFGHSTG 286
Query: 305 HGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDKLER 363
HG+G+ + E P ++ R++ I E ++ + P + +PE G ++ E+ ++ ++
Sbjct: 287 HGLGMEVHESPGLSV----RSSAILEPGMVVTVEPGIYIPETGGVRIEDDIVITENGNRT 342
Query: 364 VT 365
+T
Sbjct: 343 IT 344
>emb|CAC12166.1| (AL445066) proline dipeptidase related protein [Thermoplasma
acidophilum]
Length = 360
Score = 86.2 bits (210), Expect = 5e-16
Identities = 90/361 (24%), Positives = 156/361 (42%), Gaps = 28/361 (7%)
Query: 19 VERFQELLRENNIDGAVIRTLS------SFIYFTGTK--WLRPSLLIPAEGEPTVLVVKG 70
VER E RE +D +I S +F Y T T S LI + T+ V
Sbjct: 3 VERVFEYARE--VDTLLIYNASESARDPTFTYVTQTTNGIFEGSALIVGKNGTTI--VTS 58
Query: 71 EAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRL 130
+ E R+ DV ++ + + + ++D + VGL + + L YK+ LR+
Sbjct: 59 QLEEQAARATGLDVRIFKNSTDFQNILRELLRD--VNTVGLNY---QSLSLSSYKMLLRI 113
Query: 131 NPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVV 190
P E +D+ + R IK EL+ IR+A KI + + + +K G +E E+A+++V
Sbjct: 114 VPDKEFLDVSASILEARKIKQAEELKKIREAAKIGSEVLPDVLDSLKEGMTEYEVASKIV 173
Query: 191 RELMLNGSEDPKVYVSV-----TPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMART 245
+M NG+ P V H P K+ V + G + Y +++ RT
Sbjct: 174 YLMMKNGASGPSFDTIVAFGQNAAMPHYSP-GQAKLKRGDFVLMDYGARYMGYCSDITRT 232
Query: 246 FIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTH 305
+ G E K+ KEA ++ R G V+ + + + H
Sbjct: 233 VVFGKATEEQKEMYNTVKEAQAAGMKAIREGANGKDVDAAARNIIDSTKYKGRFIHSLGH 292
Query: 306 GVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVKKDKLERV 364
GVGL + + P + P ++ NMV++ + P + +P G ++ E+ +V K+ E++
Sbjct: 293 GVGLEVHDHPALS---PTMDFPLKANMVVT-VEPGIYVPGYGGVRIEDDVVVTKEGYEKI 348
Query: 365 T 365
T
Sbjct: 349 T 349
>pir||A72750 probable Xaa-Pro dipeptidase APE0526 - Aeropyrum pernix (strain
K1) >gi|5104177|dbj|BAA79493.1| (AP000059) 349aa long
hypothetical Xaa-Pro dipeptidase [Aeropyrum pernix]
Length = 349
Score = 84.3 bits (205), Expect = 2e-15
Identities = 65/225 (28%), Positives = 106/225 (46%), Gaps = 15/225 (6%)
Query: 142 LTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELMLNGSEDP 201
L +R +K+EWE+ I +A +IA +R EE++ G SE E+A VV +M +G P
Sbjct: 119 LISQVRSVKEEWEIGLIAEAARIAEAALRRGIEELREGVSEREVAGAVVDVIMKSGGWGP 178
Query: 202 KVYVSVT-------PRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTFIVGDPGER 254
V V P H D ++P V +G+ + Y ++M R+ G G
Sbjct: 179 SFPVIVAFGGNTALPHHHTG---DARLPHASPVLFDLGSVYKGYMSDMTRSLWRGPGGAE 235
Query: 255 VKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLLIEEP 314
++ E+ EA A++ GV V+K + GF +Y + G HGVG+ I E
Sbjct: 236 YRRLEELVAEAQAEAIDSVAPGVEAWEVDKAARLRLSKEGFSKYFIHGTGHGVGVEIHEN 295
Query: 315 PIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVKK 358
P + P + ++ MV++ I P + LP ++ E+ +V K
Sbjct: 296 P---YLRPGSSEELKPGMVVT-IEPGVYLPGMYGVRIEDMVLVTK 336
>gb|AAD53120.1|AF176799_2 (AF176799) PepQ [Lactobacillus pentosus]
Length = 369
Score = 81.9 bits (199), Expect = 1e-14
Identities = 86/361 (23%), Positives = 150/361 (40%), Gaps = 21/361 (5%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRP-----SLLIPAEGEPTVLVVKGEA 72
++++ ++ ++N++D I + Y TG + P L + A+ EP + E
Sbjct: 6 KLQQVRQWTQDNHVDVTYISNFHTISYLTGFE-SNPYERTLGLFVFADAEPFLFAPALEV 64
Query: 73 ELFKQRSWIEDVVEYQKVEELMATVVKWIKDN--GMKRVGLEFGIERDAYLIFYKIFLRL 130
E K+ W V Y E+ A + I++ K LE G + L +
Sbjct: 65 EAIKEMGWPYKVFGYLDHEDPYALIATHIQEQLTDPKSWALEAG---NLTLDRFNALKAQ 121
Query: 131 NPSIEV-VDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEV 189
P+ D+ LR++K ELE + AGK A +K G++E +IAAE+
Sbjct: 122 FPAAHFDKDLSPYIQQLRLVKTADELEKLNIAGKWADFAFEQGFAAVKAGRTEQQIAAEL 181
Query: 190 VRELMLNGSEDPKVYVSVTPRAHAE----PFRDLKVPENGIVTVVIGTDWNHYYANMART 245
LM G + V HA + +V N +V +G + Y ++ +RT
Sbjct: 182 QYALMKKGIMEMSFDTLVQAGEHAANPHGATNETQVKPNELVLFDLGVMYEGYASDASRT 241
Query: 246 FIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTH 305
G P ++ K+ +V EA A + G+ V+K + G+GEY + H
Sbjct: 242 IAYGQPTDKQKEIFDVCLEANLTAQAAIKPGMAAEDVDKIARDIITKAGYGEYFIHRLGH 301
Query: 306 GVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGA-IKYENTYIVKKDKLERV 364
G+G E P ++ + E M S + P + +P A ++ E+ +V K+ +
Sbjct: 302 GIGQTDHEFP---SIMAGNHMPLVEGMCFS-VEPGIYIPGVAGVRIEDCGVVTKEGFKPF 357
Query: 365 T 365
T
Sbjct: 358 T 358
>dbj|BAB06519.1| (AP001516) Xaa-Pro dipeptidase [Bacillus halodurans]
Length = 355
Score = 80.0 bits (194), Expect = 4e-14
Identities = 81/315 (25%), Positives = 142/315 (44%), Gaps = 37/315 (11%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIY---FTGTKWLRPSLLIPAEGEPTVLVVKGEAEL 74
R+ER + + E++ DG +I + + Y FTGT +V G A
Sbjct: 3 RLERIRAAIHEHDFDGLLIMSPYNRRYVTEFTGTAG-------------AAIVTGGAAIF 49
Query: 75 FKQRSWIEDVVEYQKVEELM---ATVVKWIKDNGMKRVGLE-FGIERDAYLIF--YKIFL 128
++E E + +++ T+ + I N K++G++ G E+ +++ F Y++
Sbjct: 50 ITDFRYVEQAEEQARGFDIVKHTGTIFEEIA-NQAKKLGIQKLGFEK-SHVTFETYELLN 107
Query: 129 RLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAE 188
+L S E+V + L ++R+IKDE EL+ +++A IA I+ G +E E+A E
Sbjct: 108 KLVDS-ELVPVAGLVENIRLIKDETELQIMQEAANIADAAFAHITSYIRAGVTEREVANE 166
Query: 189 VVRELMLNGSEDPKV-------YVSVTPRAHAEPFRDLKVPENG-IVTVVIGTDWNHYYA 240
+ + G+E Y S P A KV E G +VT+ G + Y +
Sbjct: 167 LEFFMRKQGAESSSFDIIVASGYRSALPHGVASD----KVIEKGELVTLDFGAYYKGYCS 222
Query: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
++ RT VGD + ++K + EA +E + G+ + +G+GEY
Sbjct: 223 DITRTVAVGDINDELRKIYDTVLEAQLKGMEGIKPGITGKEADALTRDHITAKGYGEYFG 282
Query: 301 AGYTHGVGLLIEEPP 315
HG+GL + E P
Sbjct: 283 HSTGHGLGLEVHEGP 297
>gb|AAG19202.1| (AE005016) probable peptidase; PepQ1 [Halobacterium sp. NRC-1]
Length = 369
Score = 77.3 bits (187), Expect = 3e-13
Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 26/367 (7%)
Query: 15 FKKRVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPS-----LLIPAEGEPTVLVVK 69
F+ R Q LR+ GAV+ + Y +G PS L++PA+GEP +
Sbjct: 4 FESRTRDCQRTLRDAGAAGAVLFPSPNLYYLSGFDET-PSERLLVLVVPADGEPAFVAPA 62
Query: 70 GEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLR 129
+W++D+ Y ++ A V D G+ L ++ + F ++
Sbjct: 63 LYETQLAAETWVDDIRTYTDSQDPSAVVRAVAADRGLTDGRLL--VDPTMWAQFTQLLRD 120
Query: 130 LNPSIEVVDILDLTM-SLRMIKDEWELENIRKAGKIALKGMR----VAEEEIKPGKSELE 184
P + D + SLR+ KD+ EL+ +R+AG A M + + I G +E E
Sbjct: 121 TLPDA-TWGLADAVLGSLRVRKDDAELDALRRAGGAADAAMADVRGLGADAI--GMTEHE 177
Query: 185 IAAEVVRELMLNGSEDPKVYV---SVTPRAHAEPFRDLKVPENGIVTVV-IGTDWNHYYA 240
+A + L +G V S A D + + G V GT + Y +
Sbjct: 178 LADFIADRLAAHGGTGVSFDVIAGSGPNGAKPHHTHDAREIQRGDPVVCDFGTVVDRYPS 237
Query: 241 NMARTFI-VGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYH 299
+ RT + GDP + EV ++A + A++ GV AV+ + G+G+
Sbjct: 238 DQTRTVVFAGDPPAAFRTVHEVVRDAHRAAVDAVEPGVSAGAVDAAARRVIADAGYGDAF 297
Query: 300 LAGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVKK 358
+ HGVGL + E P +V ++ MV S I P + P E ++ E+ +V
Sbjct: 298 VHRTGHGVGLDVHEAP---FIVADSDRKLDVGMVFS-IEPGVYRPGEFGVRIEDLVVVTA 353
Query: 359 DKLERVT 365
D E +T
Sbjct: 354 DSCEPLT 360
>pir||H71496 probable aminopeptidase P - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3329016|gb|AAC68176.1| (AE001328)
Aminopeptidase P [Chlamydia trachomatis]
Length = 356
Score = 74.1 bits (179), Expect = 2e-12
Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 31/350 (8%)
Query: 19 VERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQR 78
++R Q+ L E +D +I YF + R +L+ E + V + +L+ +
Sbjct: 6 IKRLQDSLVERALDAFLIEKDEDISYFLQDQ-ARSGVLLITRDEAVLFVSPLDKDLYAR- 63
Query: 79 SWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVVD 138
I+DVV + + + +I++ G+K +G F E Y I K R+N
Sbjct: 64 --IQDVVLVSYSKSVDQELGSYIENTGLKTIG--FDSEYTPYGIAQK---RMNSGYAFSP 116
Query: 139 ILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELMLNGS 198
+ LR +K E++ + +A +I G ++PG +E E+ VR L + +
Sbjct: 117 QSLVAEKLRCVKSTEEIQKMTRAAEIGSAGYDFVLAALRPGITEKEL----VRMLHVFWA 172
Query: 199 EDPKVYVSVTPRA---------HAEPF-RDLKVPENGIVTVVIGTDWNHYYANMARTFIV 248
VS P HA P R LK + +V + IG + Y ++M RT
Sbjct: 173 NLGIEKVSFPPIIAFGENAAFPHAIPTNRSLK--KGDVVLIDIGVCYEGYCSDMTRTVAF 230
Query: 249 G-DPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGV 307
G P +++ EA + A+E R GVP V K+ + G + + G HGV
Sbjct: 231 GATPEQQLLDGYVAVAEAQRAAIEFCRAGVPCRDVHKEAVRILRAHGMEKAFIHGLGHGV 290
Query: 308 GLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIV 356
G + E P + P +Q NM ++ + P + P G I+ E+T ++
Sbjct: 291 GREVHEYPRLS---PFSDATLQLNMAVT-VEPGVYFPGVGGIRIEDTIMI 336
>emb|CAB93372.1| (AL357523) putative peptidase [Streptomyces coelicolor A3(2)]
Length = 368
Score = 74.1 bits (179), Expect = 2e-12
Identities = 59/234 (25%), Positives = 110/234 (46%), Gaps = 10/234 (4%)
Query: 132 PSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVR 191
P++ + D+ LR++KDE E+ +R +IA + + E I G++E +A E+ R
Sbjct: 121 PALRLTDLGQAVEQLRVVKDEEEISCLRIGAEIADQALGELLESILVGRTERHLALELER 180
Query: 192 ELMLNGSEDPKVYVSVT--PRAHAEPFR--DLKVPENGIVTVVIGTDWNHYYANMARTFI 247
L+ +G++ P SV P + R D +V E ++V +G + Y + RTF+
Sbjct: 181 RLVDHGADGPAFPTSVGTGPNSGRRGHRPTDRRVEEGDFLSVCLGATYRGYRCEIGRTFV 240
Query: 248 VG-DPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHG 306
+G P + + ++ A + E G V++ G+ E+ A HG
Sbjct: 241 IGTSPADWQIELYDLVFSAQRAGREALAPGAACRDVDRAARQPLDSAGYAEHLPALTGHG 300
Query: 307 VGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVKKD 359
VGL I+E P + P ++ + V + P + LP G ++ ++T +V+ +
Sbjct: 301 VGLEIDEDP---QLAPAAMGKL-DACVPVTVEPGVHLPGRGGVRIDDTLVVRPE 350
>gb|AAK40375.1| X-pro aminopeptidase [Sulfolobus solfataricus]
Length = 351
Score = 73.7 bits (178), Expect = 3e-12
Identities = 87/351 (24%), Positives = 151/351 (42%), Gaps = 28/351 (7%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTG---TKWLRPSLLIPAEGEPTVLVVKGEAEL 74
R++R Q+ L N D + T S+ Y G + RP LL + +LV K E
Sbjct: 3 RIQRVQKELERANADYLITGTTSNMYYLIGFSEEQMERPLLLFITRDDYFLLVPKLYEEQ 62
Query: 75 FKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSI 134
KQ ++ Y+ E+ + + +K+N + + L +I R P
Sbjct: 63 LKQFP----LIVYRDGEDPYSKLN--LKENSNVLID-----DTTFSLFTIEILNRFKPG- 110
Query: 135 EVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELM 194
+ + LR +KD+ ELE + K K A + + IK +E +I ++ L+
Sbjct: 111 RIGRASRILGKLRQVKDDEELEKMEKGVKKAEQLILEFVSNIKENMTECQIERKLKSFLI 170
Query: 195 L---NGSEDPKVYVSVTPRAHAEPFR--DLKVPENGIVTVVIGTDWNHYYANMARTFIVG 249
N S DP V+ P + R D KV + + G + Y + R F +G
Sbjct: 171 EEAGNISFDP--IVTSGPNSSMPHLRCSDKKVKRGEAIVIDYGIKHDGYSTDTTRVFSLG 228
Query: 250 DPGER-VKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVG 308
P + + + +E+ K A + A + R G+ ++ +G+G+Y + HG+G
Sbjct: 229 KPNDPLILEIVEIVKTANEEAEKHVREGMRAKEIDYFAREVITNKGYGDYFIHRTGHGIG 288
Query: 309 LLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYENTYIVKK 358
+ + E P + P I++NMV + I P + LP + I+ E+ +VKK
Sbjct: 289 IDVHEDP---YISPDNDDVIEQNMVFT-IEPGIYLPGKFGIRIEDEVVVKK 335
>gb|AAC46293.1| (AF014460) PepQ [Streptococcus mutans]
Length = 359
Score = 73.4 bits (177), Expect = 4e-12
Identities = 82/366 (22%), Positives = 154/366 (41%), Gaps = 36/366 (9%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTG---TKWLRPSLLIPAEGEPTVLVVKGEAEL 74
++ + + L++ I+ AV+ S Y TG R L + T+L + E +
Sbjct: 3 KLAQIVQKLKKQGIEAAVLSDPVSINYLTGFYSDPHERLMFLFLFADQETLLFLP-ELDA 61
Query: 75 FKQRSWIE-DVVEYQKVEELMATVVKWIKDNGMKRVGLEF---------GIERDAYLIFY 124
+ +S ++ V Y E + + + ++ LEF G+E IF
Sbjct: 62 LRAKSILDISVTGYLDFENPLEKIKTLLPKTNYSKIALEFDNLNVTKFKGLET----IFS 117
Query: 125 KIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELE 184
F L P I +R+IK E++ + AG++A K +++ + I +E +
Sbjct: 118 GQFTNLTPLIN---------RMRLIKSADEIQKLLIAGELADKAVQIGFDSISLNATETD 168
Query: 185 IAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDL----KVPENGIVTVVIGTDWNHYYA 240
I A++ E+ G + V ++A L K+ N ++ +G + Y +
Sbjct: 169 IIAQIEFEMKKLGVDKMSFETMVLTGSNAANPHGLPASHKIENNHLLLFDLGVESTGYVS 228
Query: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
+M RT VG P + K + EA AL+ + GV + V+ ++ G+G+Y
Sbjct: 229 DMTRTVAVGQPDQFKKDIYNICLEAQLTALDFIKPGVSAAQVDAAARSVIEKAGYGDYFN 288
Query: 301 AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEG-AIKYENTYIVKKD 359
HG+G+ + E P ++ ++E M S + P + +PE ++ E+ V K+
Sbjct: 289 HRLGHGIGMGLHEFP---SIMAGNDMLLEEGMCFS-VEPGIYIPEKVGVRIEDCGHVTKN 344
Query: 360 KLERVT 365
E T
Sbjct: 345 GFEVFT 350
>pir||B72032 proline dipeptidase CP1058 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4377125|gb|AAD18951.1|
(AE001662) Aminopeptidase P [Chlamydophila pneumoniae
CWL029] >gi|7189972|gb|AAF38831.1| (AE002263) proline
dipeptidase [Chlamydophila pneumoniae AR39]
>gi|8979187|dbj|BAA99021.1| (AP002548) aminopeptidase P
[Chlamydophila pneumoniae J138]
Length = 355
Score = 73.4 bits (177), Expect = 4e-12
Identities = 77/349 (22%), Positives = 150/349 (42%), Gaps = 20/349 (5%)
Query: 18 RVERFQELLRENNIDGAVIRTLSSFIYFTGTKWLRPSLLIPAEGEPTVLVVKGEAELFKQ 77
R+ R Q L E+N+D ++ YF + + LLI + E V + + +L+
Sbjct: 5 RILRAQRALSEHNLDAILVEKSEDLAYFLHDEAIAGILLI-GQQEVMFFVYRMDKDLY-- 61
Query: 78 RSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIFLRLNPSIEVV 137
S I+ V ++++A + +++ +++G + A +++K R
Sbjct: 62 -SHIQRVPLTFLTQDVVADLSLYVQKQRYQKIGFD-----SASTVYHKFAQRQVLPCLWE 115
Query: 138 DILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAEVVRELMLNG 197
+ T +R IK E E+ +++A + G ++ G +E E+ ++ G
Sbjct: 116 PLECFTEKIRSIKSEEEIRRMQEAAALGSAGYDYVLTLLREGITEKEVVRQLRAFWAEAG 175
Query: 198 SEDPK-----VYVSVTPRAHAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTFIVGDPG 252
+E P + + H+ P D + + IV + IG N Y ++M R +G P
Sbjct: 176 AEGPSFPPIIAFGEHSAFPHSIP-TDRPLKKGDIVLIDIGVLLNGYCSDMTRMTALGTPH 234
Query: 253 ERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYTHGVGLLIE 312
++ ++ V EA K A+ + GV ++ + +E Y + G HGVG I
Sbjct: 235 PKLLESYPVVVEAQKRAMALCKEGVLWGDIDAEAVRVLREHHLDTYFIHGIGHGVGRHIH 294
Query: 313 EPPIATIVVPQRATRIQENMVLSIIHPPLMLPE-GAIKYENTYIVKKDK 360
E P + P+ + E+ + + P + P G I+ E+T + K+K
Sbjct: 295 EYPCS----PRGSQVKLESGMTITVEPGVYFPGIGGIRIEDTLCIDKNK 339
>pir||D75419 proline dipeptidase - Deinococcus radiodurans (strain R1)
>gi|6458990|gb|AAF10817.1|AE001972_7 (AE001972) proline
dipeptidase [Deinococcus radiodurans]
Length = 349
Score = 73.4 bits (177), Expect = 4e-12
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 15/261 (5%)
Query: 110 GLEFGIERDAYLIFYKIFLRLN-PSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKG 168
GL G E ++ + LR P+ +V + LR +K E+ IR A +A +
Sbjct: 86 GLRVGFEAESLTVAELEDLRQAWPNSTLVALRGTLGGLRAVKTPEEIGAIRAAQDLADRV 145
Query: 169 MRVAEEEIKPGKSELEIAAEVVRELMLNGSEDPKVYVSVTPRAHAEPF--RDLKVPENG- 225
I+ G EL++A E+ L G E + + A+P +V E+G
Sbjct: 146 YTEVRPMIRAGVRELDVAVEIETRLRRAGGESAFELIVASGPNGAKPHGHASKRVIEDGD 205
Query: 226 IVTVVIGTDWNHYYANMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKK 285
+VT+ +G Y ++M RT VG P +K+ + EA + A+ R GV + ++K
Sbjct: 206 LVTIDMGARLGGYNSDMTRTVAVGTPSAEMKRVYDAVLEAEEAAIAAIRPGVRAADLDKL 265
Query: 286 IEHFFKERGFGEYHLAGYTHGVGLLIEEPPIATIVVPQRATR---IQENMVLSIIHPPLM 342
G GE HGVGL + E P R T ++ MV++ I P
Sbjct: 266 ARDLLTRHGLGEAFAHSLGHGVGLEVHEGP------GLRGTSQDVLEAGMVIT-IEPGAY 318
Query: 343 LP-EGAIKYENTYIVKKDKLE 362
LP G ++ E+ +V +D E
Sbjct: 319 LPGVGGVRIEDLILVTEDGYE 339
>pir||F72247 methionine aminopeptidase - Thermotoga maritima (strain MSB8)
>gi|4982042|gb|AAD36544.1|AE001798_9 (AE001798)
methionine aminopeptidase [Thermotoga maritima]
Length = 250
Score = 72.2 bits (174), Expect = 9e-12
Identities = 65/229 (28%), Positives = 106/229 (45%), Gaps = 21/229 (9%)
Query: 149 IKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAA---EVVRELMLN------GSE 199
IK E+E ++KAGK +R + I PGK+ ++ E+ ++L + G
Sbjct: 4 IKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGY 63
Query: 200 DPKVYVSVTPRA-HAEPFRDLKVPENGIVTVVIGTDWNHYYANMARTFIVGDPGERVKKA 258
VSV H P ++ E IV+V +G + Y + A T+IVG+ ER K+
Sbjct: 64 KYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKEL 123
Query: 259 IEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHLAGYT-HGVGL-LIEEPPI 316
+ V +E L+ A++ + G+ + V I+ + GF + Y HGVG L E+P I
Sbjct: 124 VRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNV--IRDYVGHGVGRELHEDPQI 181
Query: 317 ATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYENTYIVKKDKLERVT 365
P +++ M L+I M+ EG + +VK+D VT
Sbjct: 182 PNYGTPGTGVVLRKGMTLAI---EPMVSEG----DWRVVVKEDGWTAVT 223
>pir||T47008 hypothetical protein [imported] - Yersinia pestis
>gi|4106596|emb|CAA21351.1| (AL031866) ORF28, len: 405
aa, similar to a proline peptidase protein in Bacillus
subtilis O31689, Fasta scores opt: 354, E(): 2.6e-15,
25.7% identity in 284 aa overlap, and Streptococcus
lactis O08316, Fasta scores: opt: 332, E(): 6.3e-14,
25.9% i>
Length = 405
Score = 71.8 bits (173), Expect = 1e-11
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 30/250 (12%)
Query: 129 RLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGKSELEIAAE 188
++ P +++VD L +RMIK WE+E++RK+ +I G+ A ++I+ G + E+ A
Sbjct: 157 KVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAA 216
Query: 189 VVRELM--------------LNGSEDPKVYVSVTPRAHAEPFRDLKVPENGIVTVVIGTD 234
+M + + PK+ TP + ++ G D
Sbjct: 217 FKAAVMSFPETNFSRFNLISVGDNFSPKIIADTTPAKVGD-----------LIKFDCGID 265
Query: 235 WNHYYANMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERG 294
Y A++ARTF++G+P + ++ + + + L GV + AV K G
Sbjct: 266 VAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSG 325
Query: 295 FGEYHLAGYTHGVGLL--IEEPPIATIVVPQRATRIQENMVLSIIHPPLMLPEGAIKYEN 352
Y+ HG G+ +EE P V Q MVLS+ P + G+I E+
Sbjct: 326 LPHYNRGHLGHGDGVFLGLEEVP---FVSTQATETFCPGMVLSLETPYYGIGVGSIMLED 382
Query: 353 TYIVKKDKLE 362
++ E
Sbjct: 383 MILITDSGFE 392
>sp|P55666|Y4TL_RHISN HYPOTHETICAL HYDROLASE/PEPTIDASE Y4TL >gi|2182642|gb|AAB91865.1|
(AE000098) Y4tL [Rhizobium sp. NGR234]
Length = 390
Score = 70.6 bits (170), Expect = 3e-11
Identities = 74/317 (23%), Positives = 144/317 (45%), Gaps = 28/317 (8%)
Query: 15 FKKRVERFQELLRENNIDGAVIRTLSSFIYFTG----TKWLRPSLLIPA-EGEPTVLVVK 69
F +R+ + + ID ++ + + Y TG + ++ +L+I + + EPT ++ +
Sbjct: 15 FLRRLNAVKLEMGRLEIDALIVGSSADITYLTGYTAKSGYVPQALVISSNDEEPTFILRR 74
Query: 70 GEAELFKQRSWIE--DVVEYQKV------EELMATVVKWI--KDNGMKR-VGLEFGIERD 118
+A +++++ V+ Y + ++ VV ++ +D KR VG++ G
Sbjct: 75 QDAPAAIHQTFMDRDKVIGYSEALIGNPDKDGYDAVVDFLNERDGANKRGVGVQLGYLSV 134
Query: 119 AYLIFYKIFLRLNPSIEVVDILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKP 178
+K L PS +VD +RMIK + E+ +R A IA G++ A E I+P
Sbjct: 135 RSAEKFKTRL---PSARIVDCTHSVAWIRMIKSDLEISMMRDAAAIADAGVQKAFEVIRP 191
Query: 179 GKSELEIAAEVVRELMLN-----GSEDPKVYVSVTPR---AHAEPFRDLKVPENGIVTVV 230
G E ++ A+V +L G++ +Y +PR H D+ + + + +
Sbjct: 192 GVREADVMADVAAQLARGTNGKAGTDLASMYFCSSPRTGTCHIRWSEDV-IRDGSQINLE 250
Query: 231 IGTDWNHYYANMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFF 290
I + Y + + RTF VG P +R+++ + + L+ AL + G S V
Sbjct: 251 IAGVRHGYVSAIMRTFSVGAPSDRLRRIHDAEVLGLEAALSTVKPGATCSDVANAFYRTI 310
Query: 291 KERGFGEYHLAGYTHGV 307
++ GF + GY G+
Sbjct: 311 EKSGFQKDSRCGYAIGI 327
>emb|CAB07979.1| (Z93945) prolidase-related protein [Lactobacillus delbrueckii]
Length = 373
Score = 70.6 bits (170), Expect = 3e-11
Identities = 84/353 (23%), Positives = 142/353 (39%), Gaps = 19/353 (5%)
Query: 12 KEIFKKRVERFQELLRENNIDGAVIRTLSSFIYFTG-TKWLRP---SLLIPAEGEPTVLV 67
K +++ + L E ID A + Y TG + W +LL+ G+ +L
Sbjct: 6 KLTWEEHLAALTSYLDEKGIDLAYVAEPVDIAYLTGYSSWTEERVFALLVSRTGQALLLA 65
Query: 68 VKGEAELFKQRSWIEDVVEYQKVEELMATVVKWIKDNGMKRVGLEFGIERDAYLIFYKIF 127
KQ SW + YQ E K + LE R L Y+
Sbjct: 66 PAINEGEVKQTSWADRACFYQDGENPWEKAKKRMTAWPKGFWALE---ARAVTLSHYRAI 122
Query: 128 LRLNPSIEVV-DILDLTMSLRMIKDEWELENIRKAGKIALKGMRVAEEEIKPGK--SELE 184
+ P + DI RMIK E+E ++ AG++A + + +A +K G+ SE E
Sbjct: 123 KEVFPEANLASDISTWLARQRMIKSPAEIEKLQAAGRLADQALDLAFALLKAGQGMSESE 182
Query: 185 IAAEVVRELMLNGSEDPKVYVSVTPRAHAEPFRDLK----VPENGIVTVVIGTDWNHYYA 240
+A E+ +L G D + V A L V IV +G + Y +
Sbjct: 183 LALELDYQLKKKGMGDLSFPLIVQAGESAASISGLPSQKGVQAGDIVIFDLGIMKDGYAS 242
Query: 241 NMARTFIVGDPGERVKKAIEVKKEALKLALEETRVGVPISAVEKKIEHFFKERGFGEYHL 300
+++RT +G+ + E + A + A R G+ +++ +E G+G+Y
Sbjct: 243 DVSRTVALGEISPAKWEIYETVRLAQETAARAARPGMTAGELDQVARGVIEEAGYGQYFT 302
Query: 301 AGYTHGVGLLIEEPPIATIVVPQRATRIQENMVLSIIHPPLMLP-EGAIKYEN 352
HG+G+ + EP + P +++ M S I P + LP G ++ E+
Sbjct: 303 HRLGHGIGMQVHEP---VNLEPGSKQKLEAGMCFS-IEPGIYLPGVGGVRIED 351
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.139 0.394
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135800371
Number of Sequences: 2977
Number of extensions: 5685391
Number of successful extensions: 14940
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 14870
Number of HSP's gapped (non-prelim): 37
length of query: 365
length of database: 189,106,746
effective HSP length: 57
effective length of query: 308
effective length of database: 154,992,987
effective search space: 47737839996
effective search space used: 47737839996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)