BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2191 (guaB-like1) DE:INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE
related
(179 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75215 MJ0653 homolog PAB2191 - Pyrococcus abyssi (strain O... 358 2e-98
pir||D71451 MJ0653 homolog PH0267 - Pyrococcus horikoshii >gi|32... 328 2e-89
pir||G69030 MJ0653 homolog MTH1226 - Methanobacterium thermoauto... 114 8e-25
sp|Q58069|Y653_METJA HYPOTHETICAL PROTEIN MJ0653 >gi|2128024|pir... 105 4e-22
gi|11498453 inosine monophosphate dehydrogenase (guaB-1) [Archae... 104 7e-22
sp|P50100|IMDH_METKA PUTATIVE INOSINE-5'-MONOPHOSPHATE DEHYDROGE... 101 4e-21
emb|CAC11750.1| (AL445064) inosine-5'-monophosphate dehydrogenas... 86 3e-16
pir||F72730 yhcV homolog APE0383 - Aeropyrum pernix (strain K1) ... 82 5e-15
pir||A72481 yhcV homolog APE2489 - Aeropyrum pernix (strain K1) ... 80 1e-14
sp|P32987|YBP3_ACIAM HYPOTHETICAL 17.7 KD PROTEIN IN BPS2 3'REGI... 78 5e-14
pir||F70480 conserved hypothetical protein aq_2107 - Aquifex aeo... 77 1e-13
gb|AAK42850.1| Conserved hypothetical protein [Sulfolobus solfat... 75 5e-13
pir||D72785 yhcV homolog APE0267 - Aeropyrum pernix (strain K1) ... 74 1e-12
pir||A71231 yhcV homolog PH0107 - Pyrococcus horikoshii >gi|3256... 73 3e-12
emb|CAC11434.1| (AL445063) conserved hypothetical protein [Therm... 69 2e-11
dbj|BAB07461.1| (AP001519) unknown conserved protein in others [... 69 2e-11
pir||D69035 MJ1232 protein homolog MTH126 - Methanobacterium the... 69 4e-11
pir||H75197 yhcV homolog PAB2277 - Pyrococcus abyssi (strain Ors... 69 4e-11
pir||G69873 yhcV-related protein ylbB - Bacillus subtilis >gi|23... 68 7e-11
emb|CAB62687.1| (AL133422) putative oxidoreductase. [Streptomyce... 68 7e-11
dbj|BAB06324.1| (AP001516) unknown conserved protein [Bacillus h... 68 7e-11
gi|11497682 conserved hypothetical protein [Archaeoglobus fulgid... 68 9e-11
emb|CAB94592.1| (AL359214) hypothetical protein SC7E4.04c [Strep... 68 9e-11
>pir||A75215 MJ0653 homolog PAB2191 - Pyrococcus abyssi (strain Orsay)
>gi|5457677|emb|CAB49168.1| (AJ248283)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE related
[Pyrococcus abyssi]
Length = 179
Score = 358 bits (910), Expect = 2e-98
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV
Sbjct: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
Query: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD 120
VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD
Sbjct: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD 120
Query: 121 LLSALASQNNEEEEEISKEEPEVYGICELCGQYGPLYKVHYEGREIWVCENCKDLIEGK 179
LLSALASQNNEEEEEISKEEPEVYGICELCGQYGPLYKVHYEGREIWVCENCKDLIEGK
Sbjct: 121 LLSALASQNNEEEEEISKEEPEVYGICELCGQYGPLYKVHYEGREIWVCENCKDLIEGK 179
>pir||D71451 MJ0653 homolog PH0267 - Pyrococcus horikoshii
>gi|3256656|dbj|BAA29339.1| (AP000001) 178aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 178
Score = 328 bits (832), Expect = 2e-89
Identities = 161/179 (89%), Positives = 173/179 (95%), Gaps = 1/179 (0%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
MA KILVEQ+VKRKAVVVKP+DSVH+VA++LSKNKVGSAVVMDK EVLG+VTERDILDKV
Sbjct: 1 MAPKILVEQIVKRKAVVVKPTDSVHKVAKVLSKNKVGSAVVMDKGEVLGVVTERDILDKV 60
Query: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD 120
VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAI+LMTEKGVRRILVTKFGKPIGFVTA D
Sbjct: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIELMTEKGVRRILVTKFGKPIGFVTATD 120
Query: 121 LLSALASQNNEEEEEISKEEPEVYGICELCGQYGPLYKVHYEGREIWVCENCKDLIEGK 179
LL+ALASQNNEEEE+ +EEP+VYGICELCGQYGPLYKV+YEG EIWVCENCKDLIEGK
Sbjct: 121 LLAALASQNNEEEEK-EEEEPQVYGICELCGQYGPLYKVYYEGHEIWVCENCKDLIEGK 178
>pir||G69030 MJ0653 homolog MTH1226 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622337|gb|AAB85715.1| (AE000890)
inosine-5'-monophosphate dehydrogenase related protein V
[Methanobacterium thermoautotrophicum]
Length = 187
Score = 114 bits (282), Expect = 8e-25
Identities = 63/188 (33%), Positives = 106/188 (55%), Gaps = 12/188 (6%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
M TK+ V + + P SV A I+++ KVGS +V E G++TE DI+ KV
Sbjct: 3 METKVTVHDAMTSNVITADPGISVAEAASIMTEKKVGSIIVKSNSEPEGLITESDIIRKV 62
Query: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD 120
V++ EV V E+MT+N + IE D ++ +A LM + +RR+ V + G +G +T++D
Sbjct: 63 VSRDLRASEVTVGEVMTRNLISIEPDRELSEAARLMAKNSIRRLPVVRDGALVGILTSSD 122
Query: 121 L------LSALASQNNEEEE---EISKEEPEVYGICELCGQYGPLYKVHYEGREIWVCEN 171
+ L+ + +N EE ++ + E V G+CE+CG + Y Y+G+ ++CE
Sbjct: 123 VMMVAPELTEILVENARIEENRVQLPENERSVPGVCEICGNFEE-YLEEYDGK--YICEE 179
Query: 172 CKDLIEGK 179
CK+ +EG+
Sbjct: 180 CKEDLEGE 187
>sp|Q58069|Y653_METJA HYPOTHETICAL PROTEIN MJ0653 >gi|2128024|pir||E64381 conserved
hypothetical protein MJ0653 - Methanococcus jannaschii
>gi|1592300|gb|AAB98648.1| (U67513)
inosine-5'-monophosphate dehydrogenase (guaB)
[Methanococcus jannaschii]
Length = 194
Score = 105 bits (259), Expect = 4e-22
Identities = 62/194 (31%), Positives = 109/194 (55%), Gaps = 19/194 (9%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
+A I V +V+ + + S++ +A I+++N +G+ V+++ ++ +GIVTERDI+ +V
Sbjct: 3 IACDIPVSEVMSFPVIKATKNMSIYDIANIMTENNIGAVVIVENNKPIGIVTERDIVKRV 62
Query: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAAD 120
V+K PK+V EE+M+K + I + + +A +M G++R+ V K G+ +G VT +D
Sbjct: 63 VSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSD 122
Query: 121 LLSA----------LASQNNEEEEEISKEEPE-----VYGICELCGQYGPLYKVHYEGRE 165
++ AS EE+E IS + E + GICE CG G + Y+GR
Sbjct: 123 IVRVSPELLEIVIEYASITPEEKEVISLDTDEFSEEYINGICENCGYQGRVRL--YQGR- 179
Query: 166 IWVCENCKDLIEGK 179
++C+ C + E K
Sbjct: 180 -YLCDECIEEFEEK 192
>gi|11498453 inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
fulgidus] >gi|7429344|pir||G69355 MJ0653 homolog AF0847
- Archaeoglobus fulgidus >gi|2649754|gb|AAB90390.1|
(AE001045) inosine monophosphate dehydrogenase (guaB-1)
[Archaeoglobus fulgidus]
Length = 189
Score = 104 bits (257), Expect = 7e-22
Identities = 64/189 (33%), Positives = 110/189 (57%), Gaps = 18/189 (9%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKV 60
M T + V++V+ VK +DSVH +A+ L + VGSAVV++ +GIVTE+D++ K+
Sbjct: 1 MQTDLPVKEVMTTVVCTVKRTDSVHNLAKKLVEYGVGSAVVVEDGRPVGIVTEKDLISKI 60
Query: 61 VAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRI-LVTKFGKPIGFVTAA 119
VA+ K P +V VEE+M++ + I + +++A +M ++G+RR+ +V + IG +T
Sbjct: 61 VARNKVPSKVLVEEVMSQPVITIGPNTSLREAARIMMKRGIRRLPVVNNNQELIGIITDN 120
Query: 120 DLLS---------ALASQNN-----EEEEEISKEEPEVYGICELCGQYGPLYKVHYEGRE 165
D+LS +L +Q+ + E + +EE E+ GIC+ CG+Y Y
Sbjct: 121 DILSVSLDLGEFASLVTQDASGYTIQLEGPVIEEEEEIGGICDRCGKYADKL---YPSNG 177
Query: 166 IWVCENCKD 174
+ +CE+C D
Sbjct: 178 LNLCEDCMD 186
>sp|P50100|IMDH_METKA PUTATIVE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (IMP DEHYDROGENASE)
(IMPDH) (IMPD) (ORFX) >gi|1002715|gb|AAA92086.1|
(U31567) similar to the inosine monophosphate
dehydrogenase from Pyrococcus furiosus (SwissProt
Accession Number P42851); orfX protein; Method:
conceptual translation supplied by author [Methanopyrus
kandleri]
Length = 172
Score = 101 bits (250), Expect = 4e-21
Identities = 55/161 (34%), Positives = 96/161 (59%), Gaps = 12/161 (7%)
Query: 5 ILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVM-DKDEVLGIVTERDILDKVVAK 63
+ V +V +R + P+++ +A + ++ +GS V++ +KDE +GI+TERD++ KVV++
Sbjct: 4 VSVGEVARRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQ 63
Query: 64 GKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRI-LVTKFGKPIGFVTAADLL 122
GK+P EV +IM++ + +E D +V +A+ LM +KG+RR+ +V GK IG VT D+L
Sbjct: 64 GKNPDEVIARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDIL 123
Query: 123 SA----------LASQNNEEEEEISKEEPEVYGICELCGQY 153
+ EE EE+ + + G+C+LC Y
Sbjct: 124 QVEPYLVATIEEEMKKFQEELEELEEVSEIIEGVCDLCETY 164
>emb|CAC11750.1| (AL445064) inosine-5'-monophosphate dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 145
Score = 85.8 bits (209), Expect = 3e-16
Identities = 42/135 (31%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 5 ILVEQVVKRKAVVVKPSD-SVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAK 63
+L + RK + P D S + A+I++++ VG A++ + E+ G+VTE D ++K++A+
Sbjct: 7 VLYASDIMRKYDKIMPGDTSAYEAAKIMAQDHVGFAIIAENGEIKGMVTEWDYINKIIAQ 66
Query: 64 GKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLLS 123
+DPK+V+++EIM + I+ D ++M + G+RR+ V K GK +G +T+ D+L
Sbjct: 67 DRDPKKVRIDEIMNSPIISIDPDTPTFKVTEIMAKNGIRRLPVMKNGKLLGVITSRDILR 126
Query: 124 ALASQNNEEEEEISK 138
+ + IS+
Sbjct: 127 IFKDYMDSISDIISR 141
>pir||F72730 yhcV homolog APE0383 - Aeropyrum pernix (strain K1)
>gi|5104022|dbj|BAA79338.1| (AP000059) 147aa long
hypothetical protein [Aeropyrum pernix]
Length = 147
Score = 81.5 bits (198), Expect = 5e-15
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 7 VEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVM-DKDEVLGIVTERDILDKVVAKGK 65
+ ++ + P SV A+I+ +N+VGS +V+ +++ +LGI+T+ DI+ +VVAKG
Sbjct: 1 MRDIMSSPPITTLPMTSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGL 60
Query: 66 DPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRR--ILVTKFGKPIGFVTAADLLS 123
DP+ V+V +IMT+NP + D V+ A LM E + +L + KP+G VT D++
Sbjct: 61 DPESVRVGDIMTRNPYYVYTDDSVERAASLMGEHNIGHLPVLDPETEKPVGIVTKTDIVK 120
Query: 124 ALASQNN---EEEEEISKEE 140
+ N ++EI + E
Sbjct: 121 LAPNYINVIYSLKQEIDRRE 140
>pir||A72481 yhcV homolog APE2489 - Aeropyrum pernix (strain K1)
>gi|5106194|dbj|BAA81505.1| (AP000064) 150aa long
hypothetical protein [Aeropyrum pernix]
Length = 150
Score = 80.4 bits (195), Expect = 1e-14
Identities = 47/125 (37%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 5 ILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVL-GIVTERDILDKVVAK 63
+ ++ + V VKP D V R A+++ +N +GS +V+D + L GIVTERDI+ VV++
Sbjct: 15 VRASDIMITEVVTVKPDDPVTRAAKLMVENLIGSVLVVDDEGRLRGIVTERDIV-YVVSE 73
Query: 64 GKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRI-LVTKFGKPIGFVTAADLL 122
DP + +V EIMT+NP+ + D D+ + M+E VR + +V + G P+G ++ D+L
Sbjct: 74 AWDPTKHRVWEIMTENPIVVRPDDDLLTVVRKMSETNVRHLPVVDEKGAPVGIISFRDVL 133
Query: 123 SALAS 127
L S
Sbjct: 134 DFLMS 138
>sp|P32987|YBP3_ACIAM HYPOTHETICAL 17.7 KD PROTEIN IN BPS2 3'REGION (ORF3)
>gi|99249|pir||S22196 MJ0653 homolog - Desulfurolobus
ambivalens >gi|40783|emb|CAA45529.1| (X64202) ORF3
[Acidianus ambivalens]
Length = 164
Score = 78.4 bits (190), Expect = 5e-14
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMD-KDEVLGIVTERDILDK 59
MATK V Q+ K VVKP+ ++ A+ + ++ +GS VV+D ++ V+GI+TERDI
Sbjct: 1 MATK--VSQIATTKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDI--- 55
Query: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKF-GKPIGFVTA 118
V A + VE+ MTK+ + D +V DA+D+M G R + + K GK G V+
Sbjct: 56 VKAASNRDIDSPVEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSI 115
Query: 119 ADLLSALASQNNEEEEEISKEEPEVYGICELCG 151
DL AL + + + ++E IC +CG
Sbjct: 116 RDLARALLDVHTMQFGKPAEEVKGTGVICPVCG 148
>pir||F70480 conserved hypothetical protein aq_2107 - Aquifex aeolicus
>gi|2984323|gb|AAC07845.1| (AE000773) hypothetical
protein [Aquifex aeolicus]
Length = 619
Score = 76.9 bits (186), Expect = 1e-13
Identities = 47/141 (33%), Positives = 82/141 (57%), Gaps = 7/141 (4%)
Query: 5 ILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAKG 64
+ V+ + RK + PS+SV+ + + ++ A+V +DE GI+TERD+L KV+ +
Sbjct: 153 VQVKDLKLRKVPFILPSESVYEAVKKMVEDNSSCAIVKSEDEE-GIITERDVLKKVIYRD 211
Query: 65 KDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLLSA 124
+PKEVKV+E+MT + +E + D + M++ +RR++V + G +G + D++ A
Sbjct: 212 LNPKEVKVKEVMTSPLISVEPTDFLFDVLLTMSKNNIRRVVVKEDGNILGVLEDKDII-A 270
Query: 125 LASQN-----NEEEEEISKEE 140
L +QN E E+ S EE
Sbjct: 271 LETQNLIVIVKEVEKAKSVEE 291
>gb|AAK42850.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 250
Score = 74.9 bits (181), Expect = 5e-13
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 7 VEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAKGKD 66
V+ ++ + V+V P+D V+ V RI+ N +G V+D + ++GI TER+IL K++A
Sbjct: 68 VKDIMSKDLVIVSPNDDVNHVVRIMLMNNIGGIPVVDNNVIVGIFTEREIL-KLIASSM- 125
Query: 67 PKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILV-TKFGKPIGFVTAADLLSAL 125
V+ +M+ N + I + + DA LM VRR+ V +K + +G +TAAD++ L
Sbjct: 126 -FSGLVDSVMSSNIISIGEENTIMDAAKLMVMNNVRRLPVFSKDNRLVGIITAADIVKYL 184
Query: 126 ASQNN 130
A N
Sbjct: 185 AKNKN 189
>pir||D72785 yhcV homolog APE0267 - Aeropyrum pernix (strain K1)
>gi|5103661|dbj|BAA79182.1| (AP000058) 143aa long
hypothetical protein [Aeropyrum pernix]
Length = 143
Score = 73.7 bits (178), Expect = 1e-12
Identities = 39/121 (32%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
Query: 4 KILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVL-GIVTERDILDKVVA 62
++ + V+ V ++ S+ AR++++ VGS +V+DK ++ GI+TERDI++ + A
Sbjct: 12 RLKAKHVMSTPPVTIEVGRSIAEAARLMAERGVGSLIVVDKQGLVKGILTERDIINSL-A 70
Query: 63 KGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRI-LVTKFGKPIGFVTAADL 121
GK E KVE+IM++NP+ D D++ I+ M + +R I ++ + G+P+G ++ D+
Sbjct: 71 SGKACAEGKVEDIMSRNPIVASPDDDLEIIIEKMRDMNIRHIPVIDEDGRPLGMISVRDI 130
Query: 122 L 122
+
Sbjct: 131 I 131
>pir||A71231 yhcV homolog PH0107 - Pyrococcus horikoshii
>gi|3256493|dbj|BAA29176.1| (AP000001) 139aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 139
Score = 72.6 bits (175), Expect = 3e-12
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKD-EVLGIVTERDILDK 59
M K ++ + +K + VKPS SV +R++ + VGS VV++ D V+G T+ DI+ +
Sbjct: 4 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 63
Query: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAA 119
V+ G P ++ VE IMT+N + + + + + M E ++ IL+ + GK +G T +
Sbjct: 64 VIVPGL-PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHILIEEEGKIVGIFTLS 122
Query: 120 DLLSA 124
DLL A
Sbjct: 123 DLLEA 127
>emb|CAC11434.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 178
Score = 69.5 bits (167), Expect = 2e-11
Identities = 50/169 (29%), Positives = 87/169 (50%), Gaps = 6/169 (3%)
Query: 7 VEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKD-EVLGIVTERDILDKVVAKGK 65
VE+++ V + +V +I+++N + VV D + +G+++ER I+ + + + K
Sbjct: 5 VEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK 64
Query: 66 DPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRR-ILVTKFGKPIGFVTAADLLSA 124
P EV + +M K K++ DYDV+D ++E G+ R +V G+ +G VT D LS
Sbjct: 65 KPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDSGRVVGIVTLTD-LSR 123
Query: 125 LASQNNEEEEEISKEEPEVYGICELCGQYGPLYKVHYEGREIWV--CEN 171
S+ + + +S + +C CG G L V+ E EI V C N
Sbjct: 124 YLSRASITDILLSHRTKDYQHLCPKCG-VGVLEPVYNEKGEIKVFRCSN 171
>dbj|BAB07461.1| (AP001519) unknown conserved protein in others [Bacillus
halodurans]
Length = 643
Score = 69.5 bits (167), Expect = 2e-11
Identities = 38/117 (32%), Positives = 67/117 (56%), Gaps = 2/117 (1%)
Query: 7 VEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVM-DKDEVLGIVTERDILDKVVAKGK 65
++ V+ AV V+ V VAR + S +V+ D++++ GI+TE+D++ +V+A G+
Sbjct: 174 IQDVMTEPAVTVQEQALVQEVARKMMDEGTSSVIVLNDENKLSGIITEKDLVGRVIASGQ 233
Query: 66 DPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLL 122
K K E+MTKNP I +A+ + ++ + V + G+P+G VT +DLL
Sbjct: 234 S-KTQKAYEVMTKNPYTISRHAYYYEAMSMFLMNKIKHLPVEEAGRPLGMVTLSDLL 289
>pir||D69035 MJ1232 protein homolog MTH126 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621166|gb|AAB84632.1| (AE000802)
inosine-5'-monophosphate dehydrogenase related protein
VII [Methanobacterium thermoautotrophicum]
Length = 302
Score = 68.7 bits (165), Expect = 4e-11
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 4 KILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAK 63
K V +V R V + P +V A LS + A +++ DEV GIVT DI + A
Sbjct: 179 KKTVAEVATRDLVTLAPDITVKEAAARLSSLGIEGAPIVEDDEVKGIVTLSDITASIAA- 237
Query: 64 GKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVT-KFGKPIGFVTAADLL 122
+ ++V +IM+KN + ++ D + DAI++M + + R++VT G+P G +T D+L
Sbjct: 238 --GTEFMQVSDIMSKNIITVKQDTMIADAIEVMNKHNIGRLIVTDSEGRPTGIITRTDIL 295
Query: 123 SALA 126
++A
Sbjct: 296 DSIA 299
>pir||H75197 yhcV homolog PAB2277 - Pyrococcus abyssi (strain Orsay)
>gi|5457540|emb|CAB49031.1| (AJ248283)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE RELATED
[Pyrococcus abyssi]
Length = 136
Score = 68.7 bits (165), Expect = 4e-11
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKD-EVLGIVTERDILDK 59
M K ++ + +K + VKP +V ++++ + VGS VV+D + V+G T+ DI+ +
Sbjct: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
Query: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAA 119
V+ G ++ V+EIMTK + + + + D + M+E ++ IL+ GK +G T +
Sbjct: 61 VIVPGLS-YDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLS 119
Query: 120 DLLSA 124
DLL A
Sbjct: 120 DLLEA 124
>pir||G69873 yhcV-related protein ylbB - Bacillus subtilis
>gi|2339998|emb|CAB11348.1| (Z98682) YlbB protein
[Bacillus subtilis] >gi|2633866|emb|CAB13368.1| (Z99111)
similar to IMP dehydrogenase [Bacillus subtilis]
Length = 150
Score = 67.9 bits (163), Expect = 7e-11
Identities = 43/112 (38%), Positives = 65/112 (57%), Gaps = 5/112 (4%)
Query: 22 DSVHRVARILSKNKVGSAVVMDKD--EVLGIVTERDILDKVVAKGKDPKEVKVEEIMTKN 79
D+V+ A + VG+ V+D+D ++GIVT+RD++ + +A K P K+ + MT+
Sbjct: 19 DNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAI-KKPNSQKITDAMTEK 77
Query: 80 PVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLLSALASQNNE 131
PV +E D V + + LM +RRI VTK K G VT DL +L+ Q NE
Sbjct: 78 PVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGDL--SLSEQTNE 127
>emb|CAB62687.1| (AL133422) putative oxidoreductase. [Streptomyces coelicolor A3(2)]
Length = 141
Score = 67.9 bits (163), Expect = 7e-11
Identities = 45/137 (32%), Positives = 71/137 (50%), Gaps = 4/137 (2%)
Query: 7 VEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAKGKD 66
+ V+ AV V+P +V R AR++ + VG +V ++ G++T+RDI+ + VA G+D
Sbjct: 5 IRDVMSPAAVAVEPMTTVARAARLMREEDVGDVLVTYDCDLFGVLTDRDIVLRGVADGRD 64
Query: 67 PKEVKVEEIMTKNP-VKIEYDYDVQDAIDLMTEKGVRRILVTKF-GKPIGFVTAADLLSA 124
+ V + T P V +E D A +LM VRR+ V + G P+G VT DL A
Sbjct: 65 SEATTVGAVCTPPPVVTLEPDDTTDRAAELMARHAVRRLPVVEHGGVPVGVVTLGDL--A 122
Query: 125 LASQNNEEEEEISKEEP 141
+ +IS+ P
Sbjct: 123 ATDDPHSALADISRAAP 139
>dbj|BAB06324.1| (AP001516) unknown conserved protein [Bacillus halodurans]
Length = 142
Score = 67.9 bits (163), Expect = 7e-11
Identities = 35/102 (34%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 20 PSDSVHRVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAKGKDPKEVKVEEIMTKN 79
P D++ VA + ++ VG+ + +++++LG+VT+RDI+ + VAK K P V+E+M+++
Sbjct: 17 PDDNIFEVAVKMERDNVGAVPICEEEQLLGMVTDRDIVIRSVAK-KKPNSTPVKEVMSEH 75
Query: 80 PVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADL 121
V D VQ+A LM K +RR+ V + + +G + DL
Sbjct: 76 LVTATPDMTVQEAAKLMATKQIRRLPVVENNRLVGICSLGDL 117
>gi|11497682 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7429337|pir||F69257 MJ1225-related protein AF0062 -
Archaeoglobus fulgidus >gi|2650583|gb|AAB91162.1|
(AE001102) conserved hypothetical protein [Archaeoglobus
fulgidus]
Length = 296
Score = 67.5 bits (162), Expect = 9e-11
Identities = 33/107 (30%), Positives = 61/107 (56%), Gaps = 7/107 (6%)
Query: 26 RVARILSKNKVGSAVVMDKDEVLGIVTERDILDKVVAKGKDPKEVKVEEIMTKNPVKIEY 85
+V + K ++ + V+ E++GIVT +DIL K+ +E ++ +MT NP ++
Sbjct: 39 KVLELFKKYEISAVPVLKNSELVGIVTRKDILRKI-------EENQLALLMTPNPTTVDA 91
Query: 86 DYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLLSALASQNNEE 132
D DV++ + ++T RR+ V K GK +G +T D++ +A N E+
Sbjct: 92 DADVKEVVKILTSTPFRRLPVVKDGKLVGIITVRDIIKKIAEMNIEK 138
>emb|CAB94592.1| (AL359214) hypothetical protein SC7E4.04c [Streptomyces coelicolor
A3(2)]
Length = 145
Score = 67.5 bits (162), Expect = 9e-11
Identities = 38/123 (30%), Positives = 69/123 (55%), Gaps = 2/123 (1%)
Query: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKDE-VLGIVTERDILDK 59
+A +LV +V+ + + P+ ++ + A ++S +VG+AVV D D +GI+TERD+L
Sbjct: 7 VAPPMLVREVMSTVVLTIGPAHTLRQAAALMSARRVGAAVVYDPDAGGIGILTERDVLVS 66
Query: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAA 119
V +G+DP + T + V + V++A M G R ++V G+P+G V+
Sbjct: 67 -VGRGQDPDTERTHGHTTTDVVFAAPTWTVEEAAGAMAHGGFRHLIVLDGGEPVGIVSVR 125
Query: 120 DLL 122
D++
Sbjct: 126 DII 128
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.315 0.136 0.377
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64402792
Number of Sequences: 2977
Number of extensions: 2587777
Number of successful extensions: 9714
Number of sequences better than 1.0e-10: 23
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 9650
Number of HSP's gapped (non-prelim): 34
length of query: 179
length of database: 189,106,746
effective HSP length: 57
effective length of query: 122
effective length of database: 154,992,987
effective search space: 18909144414
effective search space used: 18909144414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 162 (67.5 bits)