BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2205 (PAB2205) DE:Hypothetical protein
(218 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75211 hypothetical protein PAB2205 - Pyrococcus abyssi (st... 436 e-122
pir||H69199 conserved hypothetical protein MTH747 - Methanobacte... 248 5e-65
gi|11498234 conserved hypothetical protein [Archaeoglobus fulgid... 247 1e-64
pir||G72387 conserved hypothetical protein - Thermotoga maritima... 205 5e-52
gb|AAG19873.1| (AE005071) Vng1609c [Halobacterium sp. NRC-1] 183 1e-45
gb|AAC68686.1| (AF088800) unknown [Rhodococcus erythropolis] 150 2e-35
gb|AAK41949.1| Conserved hypothetical protein [Sulfolobus solfat... 147 9e-35
pir||F72520 hypothetical protein APE2139 - Aeropyrum pernix (str... 138 4e-32
pir||H83182 conserved hypothetical protein PA3696 [imported] - P... 133 2e-30
pir||S76801 hypothetical protein - Synechocystis sp. (strain PCC... 108 8e-23
emb|CAC11874.1| (AL445065) conserved hypothetical protein [Therm... 103 2e-21
pir||S76799 hypothetical protein - Synechocystis sp. (strain PCC... 102 5e-21
pir||S76800 hypothetical protein - Synechocystis sp. (strain PCC... 78 8e-14
gb|AAG20665.1| (AE005135) Vng2631h [Halobacterium sp. NRC-1] 68 9e-11
>pir||H75211 hypothetical protein PAB2205 - Pyrococcus abyssi (strain Orsay)
>gi|5457652|emb|CAB49143.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 218
Score = 436 bits (1110), Expect = e-122
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE
Sbjct: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
Query: 61 SFFMNVFRGPGRVGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTIFG 120
SFFMNVFRGPGRVGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTIFG
Sbjct: 61 SFFMNVFRGPGRVGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTIFG 120
Query: 121 REGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLKAT 180
REGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLKAT
Sbjct: 121 REGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLKAT 180
Query: 181 LFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLPKS 218
LFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLPKS
Sbjct: 181 LFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLPKS 218
>pir||H69199 conserved hypothetical protein MTH747 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621836|gb|AAB85251.1| (AE000853) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 219
Score = 248 bits (626), Expect = 5e-65
Identities = 124/218 (56%), Positives = 154/218 (69%), Gaps = 4/218 (1%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
M Y I HRPSFS+ + L GEA++AE GAMV M + ++T+ GGLLGA KRS+ GGE
Sbjct: 1 MRYEILHRPSFSMAHIELESGEAIKAETGAMVSMSSNIELQTET-GGLLGAFKRSI-GGE 58
Query: 61 SFFMNVFRGPGR--VGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTI 118
S F+N FR GR V AP YPGD+ LE +YAQSGAF+ E ++ID K GG KT
Sbjct: 59 SLFLNTFRAQGRGDVQLAPAYPGDVEVLETTEAIYAQSGAFMAGPEDVEIDTKLGGFKTF 118
Query: 119 FGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLK 178
F REG+FLL+++ G VFLSS+GAI L E IVDTGH+VAFTEG+DF +RK+GGLK
Sbjct: 119 FAREGLFLLKIQSSGPVFLSSFGAIYSRELVNERFIVDTGHVVAFTEGLDFSVRKVGGLK 178
Query: 179 ATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLP 216
+T SGEGLV EF G G VY+Q+RS+D F+ W+ P LP
Sbjct: 179 STFLSGEGLVAEFEGTGTVYMQSRSIDSFVGWLTPMLP 216
>gi|11498234 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7446617|pir||B69328 conserved hypothetical protein
AF0626 - Archaeoglobus fulgidus
>gi|2649993|gb|AAB90613.1| (AE001061) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 218
Score = 247 bits (623), Expect = 1e-64
Identities = 124/218 (56%), Positives = 167/218 (75%), Gaps = 4/218 (1%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
ME+RI RPS+S+LE+ LR GE V AE GAMVYM V ++T+ +GGLLG LKRS+LGGE
Sbjct: 1 MEHRIVGRPSYSMLELKLRPGEEVLAETGAMVYMKD-VELKTEMKGGLLGGLKRSLLGGE 59
Query: 61 SFFMNVF--RGPGRVGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTI 118
SFF+N F RG G +G AP Y GDII + LNGT+ AQSGAFL +S+GI++D K+GGG+T
Sbjct: 60 SFFVNRFVSRGEGVLGLAPTYQGDIIHIPLNGTILAQSGAFLASSDGIEVDTKWGGGRTF 119
Query: 119 FGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLK 178
F EG+FLL+++G G +FLSS+G+IE++ + G + VDTGH+VAF +D+++ K+GGLK
Sbjct: 120 FAGEGLFLLKIEGTGDLFLSSFGSIEELQVDGH-LRVDTGHIVAFEPTLDYKVSKVGGLK 178
Query: 179 ATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLP 216
AT+ SGEGLV +F G G V+IQTRS+ ++ W+ LP
Sbjct: 179 ATVLSGEGLVVDFKGKGKVWIQTRSVADYVGWLASLLP 216
>pir||G72387 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4980870|gb|AAD35454.1|AE001716_17 (AE001716)
conserved hypothetical protein [Thermotoga maritima]
Length = 225
Score = 205 bits (515), Expect = 5e-52
Identities = 106/220 (48%), Positives = 144/220 (65%), Gaps = 3/220 (1%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
M+Y I + S++LL+V L GE+V E GAMVYM + ++T A GG+ ALKR++LGGE
Sbjct: 1 MKYEIVLKGSYALLKVFLSTGESVVVEPGAMVYMKGPIEVKTSATGGVWKALKRAILGGE 60
Query: 61 SFFMNVF--RGPGRVGFAPGYPGDIISLELNGTLYAQSGAFLVASEGIDIDVKFGGGKTI 118
+FFMN + RG +G AP PGDI + L LY QS +FL +++DV FGG K+
Sbjct: 61 NFFMNTYISRGESEIGLAPQLPGDIDVIPLKDILYVQSTSFLACDPSVEMDVSFGGLKSF 120
Query: 119 FGREGVFLLELKGKGIVFLSSYGAIEKITLR-GESVIVDTGHMVAFTEGIDFRIRKIGGL 177
F EG+FLL+ G G V +SS+G I+ + L+ GE VDTGH+VAF + + +R GGL
Sbjct: 121 FSGEGIFLLKFIGHGDVAVSSFGGIKSVELQPGEEFTVDTGHVVAFDGTVKWNVRTFGGL 180
Query: 178 KATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLPK 217
K+TLF GEGLV F+G G VYIQTR+ F+ WI +P+
Sbjct: 181 KSTLFGGEGLVCTFTGPGRVYIQTRNYPAFVEWIKSLVPR 220
>gb|AAG19873.1| (AE005071) Vng1609c [Halobacterium sp. NRC-1]
Length = 235
Score = 183 bits (460), Expect = 1e-45
Identities = 109/222 (49%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKA-RGGLLGALKRSVLGG 59
M I HRPS++ L V+L GE++ AE GAMV VSI+T R GLL + K S+LGG
Sbjct: 1 MHVDITHRPSYAHLVVDLDPGESILAEPGAMVSHSAGVSIDTSTTRDGLLSSAK-SMLGG 59
Query: 60 ESFFMNVFRGP---GRVGFAPGYPGDIISLELNG-TLYAQSGAFLVASEGIDIDVKFGGG 115
ES F N F GRV AP PGDI +L+G TLYA GAFL + +D+ +FGG
Sbjct: 60 ESAFANEFAADHEAGRVTLAPPKPGDIAQHDLDGETLYAVDGAFLASDPSLDVASEFGGL 119
Query: 116 KTIFGREGVFLLELKGKGIVFLSSYGAIEKITLR-GESVIVDTGHMVAFTEGIDFRIRKI 174
K++ + L L G G VFL ++G IE++ L GES +VD H+VA+ E +DF R++
Sbjct: 120 KSLLAGASITPLALSGTGTVFLEAFGGIERVDLDPGESYVVDNEHVVAWEESVDFDARRV 179
Query: 175 GGLKATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLP 216
GGLK+TL SGEGLV EF+G G V+ QTR LD F S I LP
Sbjct: 180 GGLKSTLLSGEGLVMEFTGGGSVWYQTRGLDAFTSIIAGALP 221
>gb|AAC68686.1| (AF088800) unknown [Rhodococcus erythropolis]
Length = 225
Score = 150 bits (374), Expect = 2e-35
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 8/219 (3%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
M+ + H PS ++ LR ++ E+GAM+ V +E KA+GG+L LKRS+L GE
Sbjct: 1 MQIHLRHNPSSTVARCYLRARRTLRVESGAMLAHSAGVVLEAKAQGGVLQGLKRSMLSGE 60
Query: 61 SFFMNVFRGP---GRVGFAPGYPGDIISLELNG--TLYAQSGAFLVASEGIDIDVKFGGG 115
SFF+ + P G V PGD+I L + + G +L S G+ ++ K+GG
Sbjct: 61 SFFVTTYTAPPQGGWVDVTGVLPGDLIPLTITSDRPFFLNRGTWLANSYGVTVESKWGGM 120
Query: 116 KTIFGREGVFLLELKGKGIVFLSSYGAIEKITLR-GESVIVDTGHMVAFTEGIDFRIRKI 174
+FG EG F L G G V L+ YGAI+ I L+ GE+V +DTGH+VA+ G++F +R+
Sbjct: 121 SNLFGGEGGFGLRASGDGEVVLAVYGAIDVIDLQPGETVTIDTGHVVAYDLGMNFNMRRA 180
Query: 175 --GGLKATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWI 211
G ++ SGEG VF+F+G G V QTR+ F +W+
Sbjct: 181 VQGRTIQSMKSGEGFVFDFTGPGRVLAQTRNPSAFAAWL 219
>gb|AAK41949.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 232
Score = 147 bits (368), Expect = 9e-35
Identities = 82/208 (39%), Positives = 129/208 (61%), Gaps = 5/208 (2%)
Query: 14 LEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGESFFMNVFRGPGRV 73
L+V L EGEA+ +AG M+ +V+++T RGG GALKR + GG SFF+ GPG V
Sbjct: 14 LKVMLGEGEAIYVDAGHMIAKQSSVTMKTTMRGGFFGALKREITGG-SFFVTELYGPGEV 72
Query: 74 GFAPGYPGDIISLELNGT-LYAQSGAFLVASEGIDIDVKFGGGKTIF-GREGVFLLELKG 131
+ +PG I+ ++L G + A+S +FL A G++ D + G EG+FL + +G
Sbjct: 73 YLSGVFPGPIVQIQLQGNGILAESHSFLCAENGVNYDATLNKLSVGWLGGEGIFLAKFRG 132
Query: 132 KGIVFLSSYGA-IEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLKATLFSGEGLVF- 189
G VFL +YG IE+ GE + V+ H++AF EG+ + I+++GG+K+ LFSGEGL F
Sbjct: 133 TGNVFLHAYGGLIERYLDPGERLQVEAAHLMAFEEGMRYGIQRVGGIKSILFSGEGLFFV 192
Query: 190 EFSGHGDVYIQTRSLDGFLSWILPHLPK 217
+ G G V++ T +++ + + P+LP+
Sbjct: 193 DIEGPGKVWLHTLTVEQLAASLRPYLPQ 220
>pir||F72520 hypothetical protein APE2139 - Aeropyrum pernix (strain K1)
>gi|5105838|dbj|BAA81150.1| (AP000063) 228aa long
hypothetical protein [Aeropyrum pernix]
Length = 228
Score = 138 bits (345), Expect = 4e-32
Identities = 76/220 (34%), Positives = 126/220 (56%), Gaps = 5/220 (2%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
++Y +E P+F++L+V L EGE++ E+G+ + + ++T GG++ L R+V GGE
Sbjct: 7 VKYVLEKGPAFTILKVELNEGESIWVESGSYMLNKGDIEVKTTMGGGIVRGLLRAVAGGE 66
Query: 61 SFFMNVF--RGPGRVGFAPGYPGDIISLELNG-TLYAQSGAFLVASEGIDIDVKFGGGKT 117
S F N+ R V AP GDI ++EL G +Y Q ++L +++ V + G K
Sbjct: 67 SLFFNIITARSKSEVWIAPPVTGDIAAVELGGEEVYIQDSSYLAHIGDVEVGVGWRGFKG 126
Query: 118 IFGREGVFLLELKGKGIVFLSSYGAIEKITL-RGESVIVDTGHMVAFTEGIDFRIRKIGG 176
+ + ++ KG+G VF++S+GA+E I + GE + +D GH VA +G + IRK GG
Sbjct: 127 LIAEGELVWVKAKGRGTVFINSFGALEHIRVGPGEKITIDNGHFVAI-KGGKWNIRKFGG 185
Query: 177 LKATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWILPHLP 216
K GEG+V + G D+++QTR+L F + +P
Sbjct: 186 WKTFFLGGEGVVVDVEGPADLWVQTRNLPAFAGILGKFIP 225
>pir||H83182 conserved hypothetical protein PA3696 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949861|gb|AAG07084.1|AE004789_4 (AE004789)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 248
Score = 133 bits (331), Expect = 2e-30
Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 20/219 (9%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETK----ARGGLLGAL---- 52
++YRI S +E+ L GE V AEAGAM YM + + + G LLG L
Sbjct: 6 LDYRILGE-SMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAG 64
Query: 53 KRSVLGGESFFMNVFRGPGR----VGFAPGYPGDIISLELN---GTLYAQSGAFLVASEG 105
KR LGGES FM F G+ V FA YPG +++++L+ G L+ Q +FL A+ G
Sbjct: 65 KRK-LGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYG 123
Query: 106 IDIDVKFGG--GKTIFGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAF 163
+ + F G FG EG L +L+G G+VF+ + G + + L GE++ VDTG +VAF
Sbjct: 124 TRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAGGTLIRRQLNGETLRVDTGCLVAF 183
Query: 164 TEGIDFRIRKIGGLKATLFSGEGLVF-EFSGHGDVYIQT 201
T+GID+ ++ GGLK+ LF GEGL+ G G V++Q+
Sbjct: 184 TDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQS 222
>pir||S76801 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653802|dbj|BAA18713.1| (D90916) hypothetical
protein [Synechocystis sp.]
Length = 284
Score = 108 bits (266), Expect = 8e-23
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 12/221 (5%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
+ Y I ++ LE+ L+ G+ V +A + MD +V K RGGLL L+++ LG +
Sbjct: 53 LPYSINGHALYATLELTLKPGQIVLVDANVVTAMDRSVLFVNKLRGGLLDVLRKA-LGID 111
Query: 61 SFFMNVFRGPGRVG---FAPGYPGDIIS--LELNGTLYAQSGAFLVASEGIDIDVKFGGG 115
+ F+N F VG AP PGDI L +Y ++ FL + ID F
Sbjct: 112 TLFLNQFTAEQSVGHLQLAPALPGDICHYFLTTEKGIYLRADNFLACQPTVKIDTNFASM 171
Query: 116 KTIFGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIG 175
K + FLL L G+G ++ S YG + ++++ G+ + + ++VAF + +D+++ K
Sbjct: 172 KHFYNDSESFLLRLVGQGDLWFSLYGGLVQVSMNGD-LAYNPDYIVAFEDTLDYQMTKQE 230
Query: 176 G-----LKATLFSGEGLVFEFSGHGDVYIQTRSLDGFLSWI 211
G L+ ++ G+G + F+G G +++Q R + FL+++
Sbjct: 231 GLAVDRLRGDVWGGKGRLCRFTGQGKIWLQARQANSFLNYV 271
>emb|CAC11874.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 220
Score = 103 bits (254), Expect = 2e-21
Identities = 69/198 (34%), Positives = 103/198 (51%), Gaps = 9/198 (4%)
Query: 14 LEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGESFFMNVFRGPGRV 73
L L GE+V E G ++Y D ++ +A GGL G + +LGG + F+ GPG V
Sbjct: 14 LRAVLGSGESVYVEPGHLIYKDRQSRLDVRA-GGLKGMISH-MLGGSAVFLLKVDGPGEV 71
Query: 74 GFAPGYPGDIISLELNGT-LYAQSGAFLVASEGIDIDVKFGG-GKTIFGREGVFLLELKG 131
A PG I ++L G + A+ AFL GI KF G + + G EG+FL G
Sbjct: 72 ASAGFLPGKIHRIDLRGGGIIAEFNAFLCMDSGIQYSTKFAGIWQGLLGGEGLFLEHFSG 131
Query: 132 KGIVFLSSYG-AIEKITLRGESVIVDTGHMVAFTEGIDFRIRKIGGLKATL---FSGEGL 187
G +FL +G IE+ G+ + V+ H++AF + + + + +IGGL+ + GEGL
Sbjct: 132 TGSIFLHGHGQVIERDLGAGDEISVELSHVLAFDDTVQYNVERIGGLRTMILGGLEGEGL 191
Query: 188 VF-EFSGHGDVYIQTRSL 204
F G G V+I + SL
Sbjct: 192 FFAHMRGPGRVWIHSISL 209
>pir||S76799 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653800|dbj|BAA18711.1| (D90916) hypothetical
protein [Synechocystis sp.]
Length = 219
Score = 102 bits (251), Expect = 5e-21
Identities = 69/210 (32%), Positives = 114/210 (53%), Gaps = 9/210 (4%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
M Y+I H P+ S+L V L+ E + G+++ MD + + GG L AL R +LG E
Sbjct: 1 MLYKIRHYPN-SVLAVTLKPKERLYINPGSLISMDGGLVVSRVCGGGWLRALARFLLGKE 59
Query: 61 SFFMNVFRGPGR--VGFAPG--YPGDIISLEL--NGTLYAQSGAFLVASEGIDIDVKFGG 114
+ +N P + F G PG++ L+L NG + G + + G+++ V + G
Sbjct: 60 NLMVNAIHNPSDQPLSFTLGKALPGNLTRLDLPKNG-IVINPGVHVAHTSGVNMGVYWLG 118
Query: 115 GKTIFGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFRIRKI 174
+ +G +G+F L+L+GKG VFL SYG + +++ +S +V+ H+VAF + ++
Sbjct: 119 LSSWWGGQGLFGLKLQGKGRVFLGSYGTLNQLSC-PQSFVVEHSHLVAFQPKLKLKVNFP 177
Query: 175 GGLKATLFSGEGLVFEFSGHGDVYIQTRSL 204
G+ L SG GL G G++Y Q+RSL
Sbjct: 178 RGIVGDLQSGRGLSSLLKGSGNLYWQSRSL 207
>pir||S76800 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653801|dbj|BAA18712.1| (D90916) hypothetical
protein [Synechocystis sp.]
Length = 226
Score = 78.0 bits (189), Expect = 8e-14
Identities = 57/214 (26%), Positives = 108/214 (49%), Gaps = 11/214 (5%)
Query: 1 MEYRIEHRPSFSLLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGE 60
M ++ + P ++ V L E + A+ G+++ M P +++++ R GA K+S G +
Sbjct: 1 MNIKLLNSPQTAIARVLLEANEELAAQHGSLIAMSPDITVQSSVRRTSDGAGKQSSRGNQ 60
Query: 61 --SFFMNVFR---GPGRVGFAPGYPGDIISLELNGT-LYAQSGAFLVASEGIDIDVKFGG 114
+ F+N +R G + AP G++ +L G L + ++L + +DI F G
Sbjct: 61 VKTMFLNNYRTGENGGEIYLAPPLVGNLGHYQLGGRKLIVRQSSYLASDGKVDI---FMG 117
Query: 115 GKTIFGREGVFLLELKGKGIVFLSSYGAIEKITLRGESVIVDTGHMVAFTEGIDFR-IRK 173
K+ +E L L G G V +SS+GA+ + + G+ IV++ H+VAF + + ++
Sbjct: 118 YKSAAKKEPYSWLSLVGVGDVLISSFGAMYSLEVNGKQ-IVNSDHVVAFDNSLKVKPYQE 176
Query: 174 IGGLKATLFSGEGLVFEFSGHGDVYIQTRSLDGF 207
+ L + +++EFSG G ++ QT F
Sbjct: 177 LRPWPKRLVPNQEILYEFSGTGTIFCQTHGPRNF 210
>gb|AAG20665.1| (AE005135) Vng2631h [Halobacterium sp. NRC-1]
Length = 201
Score = 67.9 bits (163), Expect = 9e-11
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 13 LLEVNLREGEAVQAEAGAMVYMDPTVSIETKARGGLLGALKRSVLGGESFFMNV--FRGP 70
LLEV L EAV A AGA+V V I+ ++R G + ++ + E + V G
Sbjct: 13 LLEVTLDAEEAVLAAAGALVDHTGDVRID-RSRAGAMRSVANTAREREVTPVRVRAVGGG 71
Query: 71 GRVGFAPGYPGDIISLEL---NGTLYAQSGAFLVASEGIDIDVKFGGGKTIFGREGVFLL 127
V FAP YPG+I + EL G + F+ A G+ + + G G G+ +
Sbjct: 72 AVVRFAPDYPGEIAACELGAAGGRVSVAWDGFVAAPVGVSVGARSIGNAPTRGM-GLLMT 130
Query: 128 ELKGKGIVFLSSYGAIEKITL-RGESVIVDTGHMVAFTEGIDFRIRKIGGLKATLFSGEG 186
+ G+ V+++ G +E++ L G+S +V ++VAF + + + ++ ++ G
Sbjct: 131 QFTGERTVYVAGRGRVERVALAEGDSRVVAAANVVAFEDRVRVAVERVSAMEDAASVG-- 188
Query: 187 LVFEFSGHGDVYIQTR 202
F G G V++ TR
Sbjct: 189 ---RFHGPGTVWVATR 201
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.144 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84109098
Number of Sequences: 2977
Number of extensions: 3644529
Number of successful extensions: 8417
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8356
Number of HSP's gapped (non-prelim): 15
length of query: 218
length of database: 189,106,746
effective HSP length: 52
effective length of query: 166
effective length of database: 157,985,422
effective search space: 26225580052
effective search space used: 26225580052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)