BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2211 (bmr-like) DE:Multidrug resistance protein
(384 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75210 multidrug resistance protein PAB2211 - Pyrococcus ab... 754 0.0
pir||G71246 hypothetical protein PH0230 - Pyrococcus horikoshii ... 645 0.0
gb|AAK43250.1| Permease, putative [Sulfolobus solfataricus] 139 4e-32
dbj|BAB07201.1| (AP001518) multidrug-efflux transporter [Bacillu... 113 3e-24
gb|AAK42050.1| Multidrug-efflux transporter [Sulfolobus solfatar... 103 3e-21
pir||F72774 hypothetical protein APE0184 - Aeropyrum pernix (str... 101 2e-20
emb|CAC12313.1| (AL445066) multidrug resistance protein NorA rel... 100 4e-20
pir||C75537 conserved hypothetical protein - Deinococcus radiodu... 99 8e-20
gb|AAK42813.1| Permease, major facilitator superfamily [Sulfolob... 94 3e-18
emb|CAC12498.1| (AL445067) sugar transporter related protein [Th... 85 2e-15
emb|CAC12197.1| (AL445066) multidrug resistance protein related ... 75 1e-12
>pir||G75210 multidrug resistance protein PAB2211 - Pyrococcus abyssi (strain
Orsay) >gi|5457643|emb|CAB49134.1| (AJ248283) Multidrug
resistance protein [Pyrococcus abyssi]
Length = 384
Score = 754 bits (1926), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ 60
MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ
Sbjct: 1 MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ 60
Query: 61 ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKV 120
ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKV
Sbjct: 61 ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKV 120
Query: 121 KSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVV 180
KSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVV
Sbjct: 121 KSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVV 180
Query: 181 IPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDI 240
IPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDI
Sbjct: 181 IPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDI 240
Query: 241 KEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIV 300
KEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIV
Sbjct: 241 KEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIV 300
Query: 301 YVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAVSLSY 360
YVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAVSLSY
Sbjct: 301 YVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAVSLSY 360
Query: 361 PFYATAILYIFATAMFYAFFIKHN 384
PFYATAILYIFATAMFYAFFIKHN
Sbjct: 361 PFYATAILYIFATAMFYAFFIKHN 384
>pir||G71246 hypothetical protein PH0230 - Pyrococcus horikoshii
>gi|3256619|dbj|BAA29302.1| (AP000001) 385aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 385
Score = 645 bits (1646), Expect = 0.0
Identities = 310/384 (80%), Positives = 352/384 (90%)
Query: 1 MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ 60
ME+DAKVLVIA AVGQLFLQFSWF+MPFYLK LGY M+KMG+LFS QT IGG+SFLLAGQ
Sbjct: 1 MEKDAKVLVIATAVGQLFLQFSWFIMPFYLKALGYDMNKMGILFSTQTLIGGISFLLAGQ 60
Query: 61 ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKV 120
+SL+ GYK+TLILAA +G LGRI QV+ YNF +L+LGFFLVG+NMGLRDPNYSALLSEKV
Sbjct: 61 LSLKFGYKKTLILAAGMGALGRIFQVLAYNFEMLLLGFFLVGVNMGLRDPNYSALLSEKV 120
Query: 121 KSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVV 180
K+EEERHRIFSYSFGLGTLMNA+GVLVAGY PG+L+SLGY + +AY+LVIALAL+QF +V
Sbjct: 121 KNEEERHRIFSYSFGLGTLMNALGVLVAGYLPGHLVSLGYSERLAYKLVIALALIQFAIV 180
Query: 181 IPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDI 240
PAL+++KDVPV S+IKWRK+LI++ILKFSLPSA+IGLGAGITIPYMSIYFNLRFGRDI
Sbjct: 181 FPALIVIKDVPVTTSKIKWRKELIIKILKFSLPSALIGLGAGITIPYMSIYFNLRFGRDI 240
Query: 241 KEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIV 300
+EISWVFF Q++VMGLGSFILP L+ ++G VKVITYFQ SAA LFLIFPS+PTF +AS V
Sbjct: 241 REISWVFFSQEVVMGLGSFILPALINRLGPVKVITYFQGSAAFLFLIFPSLPTFAIASFV 300
Query: 301 YVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAVSLSY 360
Y+IRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRG GNYIGG LFA+SL+Y
Sbjct: 301 YIIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGLGNYIGGALFAISLAY 360
Query: 361 PFYATAILYIFATAMFYAFFIKHN 384
PFY TAI YI AT MFYAFFIK+N
Sbjct: 361 PFYTTAIFYIIATTMFYAFFIKYN 384
>gb|AAK43250.1| Permease, putative [Sulfolobus solfataricus]
Length = 359
Score = 139 bits (348), Expect = 4e-32
Identities = 105/387 (27%), Positives = 185/387 (47%), Gaps = 40/387 (10%)
Query: 1 MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ 60
M+ + +LV+A++VG + + +M YLK LG +GV+ + L L
Sbjct: 1 MKSEDFLLVLASSVGGIVWGANTVIMALYLKSLGLNPLTIGVILGSAIIVNTLLSLFWAV 60
Query: 61 ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILI-LGFFLVGINMGLRDPNYSALLSEK 119
+ G K+ + ++ +G L +L +I Y+ I G+ L+ S++L+EK
Sbjct: 61 LGDAYGRKKFVYISRGVGGLSFLLLLITPYAYLFINQGYGLI-----------SSILAEK 109
Query: 120 VKSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLV 179
+ + +Y L T+ + +G L+ I L YR IA ++ L L+
Sbjct: 110 ---SGDLDKAMAYRSSLNTIFSVVGSLLP-------IVLNYRSIIAVDSIVTFLSLLLLI 159
Query: 180 VIPALMLVKDVPVKESRIKWRKDLIVRILKFSL-----PSAIIGLGAGITIPYMSIYFNL 234
PVKE+ RK + ++I F + AIIGLGAG+ +P +S++FNL
Sbjct: 160 -----------PVKENYRGTRK-VTLKISSFKVLGKLSTEAIIGLGAGVLLPMLSLWFNL 207
Query: 235 RFGRDIKEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTF 294
RF +S ++ ++ + LG+ P L + +G ++ I ++A L I P +
Sbjct: 208 RFHATASSLSPIYAISEITLALGTLTSPFLAKTLGRIRAIVITHFAAIALLFIMPFSTSL 267
Query: 295 ILASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLF 354
+A ++YV+R++LMN P+ +S + EE++ + + R G + G LF
Sbjct: 268 FIAGVIYVMRNVLMNSTGPLMNSLVFKVVKEEERSRVNSMLQLLDAIPRSLGPNLTGYLF 327
Query: 355 AV-SLSYPFYATAILYIFATAMFYAFF 380
+ +L+ PF+ T LY+ AT +FY FF
Sbjct: 328 YIGNLNVPFFITGSLYLVATILFYNFF 354
>dbj|BAB07201.1| (AP001518) multidrug-efflux transporter [Bacillus halodurans]
Length = 413
Score = 113 bits (281), Expect = 3e-24
Identities = 95/399 (23%), Positives = 174/399 (42%), Gaps = 19/399 (4%)
Query: 3 RDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQIS 62
R+ + +++ + + L + +Y++ LGY G + ++Q ++ L AG IS
Sbjct: 17 RNVRHFFLSSLLSNIGLGIFMVIYNYYIRELGYDEQVNGRVIAMQAMATAIALLPAGFIS 76
Query: 63 LRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKVKS 122
+ G K+ + + ALL + +L+ I +L++ F+ G + + LL+E S
Sbjct: 77 DQKGRKKMIFIGALLTAISLLLRSIFAGESLLLMTAFMTGFFLAFIQVSAIPLLAEN-SS 135
Query: 123 EEERHRIFSYSFGLGTLMNAIGVLVAGY---APGYLISLGYRKEIAYRLVIALALLQFLV 179
E+ER +FS++F L + N IG L+ G A L + + L+I A F
Sbjct: 136 EKERVHLFSFNFALIMIANVIGNLLGGILTDAWNVLWGVSMLSSVRLTLLIGTACF-FAA 194
Query: 180 VIPALMLVKDVPVKESR---------IKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSI 230
+ P L + + +R +K + + I F++ + +IG G+G+ IPY+++
Sbjct: 195 LWPVLQIEERSKQANARHEDTSLIQQMKQHRSSLKLIGLFAIANVLIGFGSGLVIPYLNL 254
Query: 231 YFNLRFGRDIKEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPS 290
YF RF + V Q + + + P + K G V+ + Y Q ++ L+
Sbjct: 255 YFTDRFDMSTSLVGIVLSMGQAMTAIALMVGPMVAHKYGEVRAVVYLQLASLPFLLVAAF 314
Query: 291 IPTFILASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGI-RRAFSTFMRGAGNYI 349
LA + ++ R LMN P+ + MM K A + + F G
Sbjct: 315 TMNPWLAVLAFLFRQALMNAGNPIQMALMMRSVHPAMKGLANSVGQMVFQLGWAVMGPVS 374
Query: 350 GGLLFA----VSLSYPFYATAILYIFATAMFYAFFIKHN 384
G++ + F TAILY+ +A F+ F + N
Sbjct: 375 AGIVVVYGPYTGYAIAFSMTAILYLIGSAYFFLVFRRVN 413
>gb|AAK42050.1| Multidrug-efflux transporter [Sulfolobus solfataricus]
Length = 398
Score = 103 bits (255), Expect = 3e-21
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 28/385 (7%)
Query: 8 LVIANAVGQLFLQFSWFVMPFYLKV-LGYGMDKMGVLFSVQTFIGGLSFLLAGQISLRIG 66
L I+ + L + ++P+ + V L Y +G +++V TF + L G ++ G
Sbjct: 9 LTISRILRSLSAGIIFVILPYLVLVELKYSSLILGFIYTVGTFATAILGLAVGYLADLYG 68
Query: 67 YKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINM----------GLRDPNYSALL 116
K +LIL +L L +L I ++ L + L G + G+ P +AL+
Sbjct: 69 RKNSLILVSLFLPLSVLLIFINHSLIALFIASALGGYSATGAVAGGGIGGIVAPIQNALI 128
Query: 117 SEKVKSEEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQ 176
+E + E+R FS L + +IG LVAG+ + + + I L L
Sbjct: 129 TE-LTDNEDRTFYFSLFTFLSGISASIGSLVAGF---------FTSKQGFLFAIILGFLS 178
Query: 177 FLVVIPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRF 236
L + P + K++ + + +K + V I KFS+ + G+ G+ P++ YF + +
Sbjct: 179 VLALFP--IRAKNIKARSASLKSK----VVIGKFSITGLLNGISVGLITPFLIPYFIIVY 232
Query: 237 GRDIKEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFIL 296
E+S F L+ + P L +KIG +K I + ALL +I P I F +
Sbjct: 233 HTPKSEMSIYTFLSSLIASTIILLAPVLDKKIGFLKSIAITRGIGALLSIIMPLIRVFPI 292
Query: 297 ASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAV 356
+ +Y+I + + P+ M S +E A GI + + G LF+
Sbjct: 293 SLGIYLILPGMRVLALPIQQRAMTEMVSQDEVGRAMGINQVTRLAASSGSTGLTGYLFSE 352
Query: 357 S-LSYPFYATAILYIFATAMFYAFF 380
S + PF A+ I+ M+Y FF
Sbjct: 353 SQIDVPFLASGIIMALNIYMYYKFF 377
>pir||F72774 hypothetical protein APE0184 - Aeropyrum pernix (strain K1)
>gi|5103575|dbj|BAA79096.1| (AP000058) 412aa long
hypothetical protein [Aeropyrum pernix]
Length = 412
Score = 101 bits (249), Expect = 2e-20
Identities = 95/385 (24%), Positives = 174/385 (44%), Gaps = 16/385 (4%)
Query: 5 AKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQISLR 64
A +LV+A G F + P Y+ G+ + G+L S T + LL+G +S
Sbjct: 3 APLLVLAALNGLSFGVIVTVLAP-YMYSAGFSGTEWGLLTSTATVTSIIFTLLSGPLSDA 61
Query: 65 IGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKVKSEE 124
+G +R + ++ L + + + GF L G++MG+ +AL++ + +E
Sbjct: 62 LGARRVVAAGYIVKAASFTLLAVPSTVF-MAAGFTLSGVSMGISWSATTALVARSGR-DE 119
Query: 125 ERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEI-AYRLVIALALLQFLVVIPA 183
HR F++ + A+G L+ G P L S+ + AYR I L L+
Sbjct: 120 MLHRSFTFFMASNMVGGALGSLM-GVIPPLLSSITSLTLLEAYRATILLVAPLSLLQAGI 178
Query: 184 LMLVKDVPVKESRIKWRKDLIVRILKFSLP----------SAIIGLGAGITIPYMSIYFN 233
+ V++ E R ++R + ++ + +IGLGA ++I ++ YF
Sbjct: 179 ALAVREEVSAEGRASIGPGELLRGFREAVSDRRFRLLILFNMVIGLGASMSIHNIAYYFA 238
Query: 234 LRFGRDIKEISWVFFGQQLVMGLGSFILPELVRKIGA-VKVITYFQWSAALLFLIFPSIP 292
++G EI V +Q+ M L + + ++G+ +KV + L + +
Sbjct: 239 AKYGVTSAEIGVVNALEQVSMALVAVGASRIAERVGSTLKVYIALTSLSVPLLVAMTLVD 298
Query: 293 TFILASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGL 352
++++A+ +YV+R++LMN P+ ++ M E + +A+ I T AG IGG
Sbjct: 299 SYVVAAAIYVVRTVLMNAANPLLEALTMRVVPRERRGSASSILSLSFTLPATAGRAIGGA 358
Query: 353 LFAVSLSYPFYATAILYIFATAMFY 377
L ++L P TA +Y A A Y
Sbjct: 359 LLDINLELPLRLTAAIYTLALAHLY 383
>emb|CAC12313.1| (AL445066) multidrug resistance protein NorA related protein
[Thermoplasma acidophilum]
Length = 362
Score = 100 bits (246), Expect = 4e-20
Identities = 87/364 (23%), Positives = 162/364 (43%), Gaps = 19/364 (5%)
Query: 26 MPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQISLRIGYKRTLILAALLGLLGRILQ 85
M YL +GY + +GV+ I + ++ G K LI+ L+ +
Sbjct: 1 MSLYLHHIGYSLFTVGVILGSAIVISSILTFFMAMLADHYGRKSLLIVLYLIFAVSAFGF 60
Query: 86 VIGYNFYILILGFFLVGINMGLRDP-----NYSALLSEKVKSEEERHRIFSYSFGLGTLM 140
++ +ILIL L P + A+ + + E++R +S L T
Sbjct: 61 LVSKEMFILILLSGLGSFTGSGGGPIGSGGAFGAVQTALITEFTEKNR---FSRVLSTA- 116
Query: 141 NAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVVIPALMLVKDVPVKESR---- 196
+A+G+L A A +LI + R + LA + +V + + + D ++ +
Sbjct: 117 SAVGLL-ASSAGSFLIDVVERIGGDVYRLFYLAGIMGIVGMLITVFLNDNGIRSRKLLPS 175
Query: 197 IKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDIKEISWVFFGQQLVMGL 256
I W+K +++ S+P+ G+GAG P S++F+LRFG EI +F + + +
Sbjct: 176 ISWKK-----MIRLSIPTIPNGIGAGFVSPIFSLWFHLRFGISSGEIGVIFGISNIFVLI 230
Query: 257 GSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIVYVIRSILMNIVWPVND 316
++P ++R + I + + ++++L + IP +A++VY++R L PV
Sbjct: 231 FMIVIPRIIRSESELNAIVWTRAASSMLLVALAFIPFLQIAALVYILRQGLQMGAVPVRQ 290
Query: 317 SFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAVSLSYPFYATAILYIFATAMF 376
SF MG + E+ATA+G+ T + G L ++S YP I+ ++
Sbjct: 291 SFSMGIVDSTERATASGVTSMTRTGFSAVSPPLAGDLLSISSIYPPLIGGIITAADPLLY 350
Query: 377 YAFF 380
Y F
Sbjct: 351 YMLF 354
>pir||C75537 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6457962|gb|AAF09871.1|AE001890_3 (AE001890)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 406
Score = 99.1 bits (243), Expect = 8e-20
Identities = 90/371 (24%), Positives = 156/371 (41%), Gaps = 20/371 (5%)
Query: 21 FSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQISLRIGYKRTLILAALLGLL 80
F + FYL+ LG G L ++ L A ++ RI TL + A L +L
Sbjct: 25 FMMLFLNFYLRALGLDPAWQGFLNALPALTLAALSLPAVALARRISNAHTLKVGAALSML 84
Query: 81 GRILQVIGYNFYILILGFFLVGINMGLRDPNYSALLSEKVKSEEERHRIFSYSFGLGTLM 140
G +L + + ++I+G + G L + ++ E+ R +FS L T
Sbjct: 85 GTLLMALAHGPVLVIVGGLIQGAGSALSVVAGAPFMANN-SDEKSRVALFSVQSALMTGA 143
Query: 141 NAIGVLVAGYAPGYLISLGYRKEI---AYRLVIALAL-LQFLVVIPALMLV---KDVPVK 193
+G L+ G P + + A R+ + +A LQ L ++P L L K P
Sbjct: 144 GFLGNLLGGRVPELYAAATHTLPSSLGALRVALLVAAGLQLLGLLPVLFLRPSGKTRPAG 203
Query: 194 ESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDIKEISWVFFGQQLV 253
S K + R++ P+ ++GLGAG TIP++++Y RF D + +F L
Sbjct: 204 RSLAVRDKATMARLV---FPNVLVGLGAGATIPFLNVYIEGRFHVDYASLGSLFAWTSLA 260
Query: 254 MGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIVYVIRSILMNIVWP 313
L S + P LVR++G + + Q S+ + P + ++ R LMN P
Sbjct: 261 TALTSLVQPLLVRRLGQLPTVLAVQVSSLPFLALLGFAPQLWMVTVAMFTRGALMNAAGP 320
Query: 314 VNDSFMMGFFSTEEKATAAGIRR-------AFSTFMRGAGNYIGGLLFAVSLSYPFYATA 366
V ++ M E++ + + A S+ + G G L F+++ + F T
Sbjct: 321 VYSAYAMTVLPEEDRPMYSAVNTMAWDLGWALSSMLSGVVR--GALDFSLAFNVLFGWTL 378
Query: 367 ILYIFATAMFY 377
++Y + Y
Sbjct: 379 LMYAASVLAIY 389
>gb|AAK42813.1| Permease, major facilitator superfamily [Sulfolobus solfataricus]
Length = 391
Score = 94.0 bits (230), Expect = 3e-18
Identities = 93/372 (25%), Positives = 161/372 (43%), Gaps = 30/372 (8%)
Query: 10 IANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQISLRIGYKR 69
I ++G +++ S YL +G + +G++F L G I RIGYK+
Sbjct: 15 ILRSIGIIYITLS---SSLYLSAIGVKPEIIGIIFLGAIGFSSTLNLALGIIGDRIGYKK 71
Query: 70 TLILAALLGLLGRILQVIGYNFYILILGFFLVGIN------MGLRDPNYSALLSEKVKSE 123
LI +L + +L + N ++ + G+ G+ P +AL++ E
Sbjct: 72 VLIFVEILAAIASMLLALSINQTLIFAALIIGGVGGAAGGIRGVFSPGLTALVASNWSEE 131
Query: 124 EERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIA-----YRLVIALALLQFL 178
+ER R S+ +L AG L+S+ R I+ YRL+ L+ L
Sbjct: 132 KERVRRLSFLMSASSL--------AGIGGSVLLSI--RSYISNSVEGYRLLYFLSFALLL 181
Query: 179 VVIPALMLVKDV--PVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRF 236
+L+LVK+V P K S++ +K + I K + ++I G G GI IP + +++ L F
Sbjct: 182 ASAISLLLVKEVKRPKKTSKVM-KKSSMKYISKVIVSNSITGFGLGIAIPLLPLWYKLAF 240
Query: 237 GRDIKEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPSIPTFIL 296
+ EI +F L +GS + +++ V IT L+ + F P L
Sbjct: 241 HANSFEIGLIFTISYLTTAIGSLLSNKIMFDPLKVASITRILNGVFLIAMAFS--PWLAL 298
Query: 297 ASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLLFAV 356
A+ +Y+ R + I P + + S E+ TA+ + +T + + I G L +
Sbjct: 299 AAGLYIARGLNAGIGAPNRSAVNVRGVSAEDFGTASSF-QGLATRLSQMSSGISGYLLDI 357
Query: 357 SLSYPFYATAIL 368
S S P +L
Sbjct: 358 SYSLPLEIGGLL 369
>emb|CAC12498.1| (AL445067) sugar transporter related protein [Thermoplasma
acidophilum]
Length = 381
Score = 84.7 bits (206), Expect = 2e-15
Identities = 80/393 (20%), Positives = 163/393 (41%), Gaps = 27/393 (6%)
Query: 1 MERDAKVLVIANAVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLAGQ 60
M R +L I+ A+ ++P+YL LG + ++ V G + LL
Sbjct: 1 MHRYTFMLTISKAIRSFIFAAMAIIVPYYLSSLGLNAVETSLVIFVSLVSGAVFILLYPY 60
Query: 61 ISLRIGYKRTLILAALLGLLGRILQVIGYNFYILILGFFLVGINMGLRD-----PNYSAL 115
+ +++ K +IL + L L ++ +I ++ Y+ + F+ GI++ RD P
Sbjct: 61 VRMKL--KAKMILLSALMALAFVILIITHSVYVFVAAIFIGGISLTGRDFSAYQPVEQYA 118
Query: 116 LSEKVKSEEERHRIFSY----SFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIA 171
+S + ++ ++ FS S+G + + L Y Y+ + +++
Sbjct: 119 ISRYEQEQKAKNSAFSIYNFGSYGSAAVASLFLFLYVHYVFTYI----------FIVLLV 168
Query: 172 LALLQFLVVIPALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAG-ITIPYMSI 230
L+LLQ + + + P +RI +D+ + S A+ G G +T +++
Sbjct: 169 LSLLQLAMYLAISFPEYNRPSAANRIP--QDVRRHVSTLSALFAVDAFGGGFVTTSMLTL 226
Query: 231 YFNLRFGRDIKEISWVFFGQQLVMGLGSFILPELVRKIGAVKVITYFQWSAALLFLIFPS 290
+F + + + ++F +V + I + KIG ++ + Y + + ++ P
Sbjct: 227 WFKVVYHISLGYAGFIFIIVNIVTAISILISSHISGKIGLIRTMVYTHVISNVSLILMPV 286
Query: 291 IPTFILASIVYVIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIG 350
IP I + + +R + P DSF + + + + T + +G IG
Sbjct: 287 IPNLIASQVFLYLRQTTSQMDVPARDSFTNTIIPPDYRVNSNSVFTTVRTIGQVSGPAIG 346
Query: 351 GLLFAV---SLSYPFYATAILYIFATAMFYAFF 380
G L SL Y AT I+Y + + Y +F
Sbjct: 347 GFLIDAMPPSLLYVAGATKIIYDISLYIKYHWF 379
>emb|CAC12197.1| (AL445066) multidrug resistance protein related protein
[Thermoplasma acidophilum]
Length = 382
Score = 74.9 bits (181), Expect = 1e-12
Identities = 73/352 (20%), Positives = 155/352 (43%), Gaps = 19/352 (5%)
Query: 13 AVGQLFLQFSWFVMPFYLKVLGYGMDKMGVLFSVQTFIGGLSFLLA-GQISLRIGYKRTL 71
+ G +F+ S +P YL + + +G+++ V T + +S +A G + RIGYK +L
Sbjct: 10 SAGLIFMALS---LPLYLLLNRISIVNVGIIY-VGTALANVSVTIAIGMLGDRIGYKYSL 65
Query: 72 ILAALLGLLGRILQVIGYNFYILILGFFL---VGINMGLRDP------NYSALLSEKVKS 122
+ + LL + + ++++ + G G+R Y A + ++
Sbjct: 66 VFGEIPALLASGILAFTRSVPLIVIATVISGSAGAPGGMRGSFSVGITPYLARIWQEPSI 125
Query: 123 EEERHRIFSYSFGLGTLMNAIGVLVAGYAPGYLISLGYRKEIAYRLVIALALLQFLVVIP 182
ER ++ + ++ ++ + + G+ LG EI Y + L LL F +
Sbjct: 126 RIERMAQITFVASIASIGGSLLLYLHGFITRIYGDLG-AFEILYHVAFILILLSF---VS 181
Query: 183 ALMLVKDVPVKESRIKWRKDLIVRILKFSLPSAIIGLGAGITIPYMSIYFNLRFGRDIKE 242
M+ +D K++ RK+ + + + + I G G ++ +S +F +R+G +
Sbjct: 182 LTMIRRDRRQKKTTKFLRKETMKFSARVIITNVINGSAIGFSMALISAWFEIRYGVSASK 241
Query: 243 ISWVFFGQQLVMGLGSFILPEL-VRKIGAVKVITYFQWSAALLFLIFPSIPTFILASIVY 301
I VF + +GS + + + + AV + + +L + + P FI+ S +Y
Sbjct: 242 IGLVFTISYITTAIGSLLASRIHISRERAVYFGSLTRILQGILLIAMAASPIFIMGSTIY 301
Query: 302 VIRSILMNIVWPVNDSFMMGFFSTEEKATAAGIRRAFSTFMRGAGNYIGGLL 353
++R+++ P+ + + E+ TA+ I+ A S M+ G L+
Sbjct: 302 IVRTVVAGFGTPIRNVVNIQGIKDEDLGTASSIQGAPSRIMQSTSGIAGYLM 353
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.332 0.148 0.438
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131164944
Number of Sequences: 2977
Number of extensions: 5406774
Number of successful extensions: 16070
Number of sequences better than 1.0e-10: 11
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 16038
Number of HSP's gapped (non-prelim): 11
length of query: 384
length of database: 189,106,746
effective HSP length: 51
effective length of query: 333
effective length of database: 158,583,909
effective search space: 52808441697
effective search space used: 52808441697
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 166 (69.1 bits)