BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB2230 (PAB2230) DE:sugar TRANSPORT SYSTEM PERMEASE PROTEIN (313 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||C75208 sugar transport system permease protein PAB2230 - Py... 637 0.0 pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii ... 580 e-164 pir||A72451 probable lactose transport system permease protein A... 347 8e-95 pir||C72378 sugar ABC transporter, permease protein - Thermotoga... 185 6e-46 pir||D72331 sugar ABC transporter, permease protein - Thermotoga... 99 5e-20 emb|CAB72405.1| (AL138978) putative integral membrane transport ... 99 5e-20 dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Ba... 99 5e-20 emb|CAB95276.1| (AL359779) putative sugar transport integral mem... 99 8e-20 dbj|BAB05584.1| (AP001513) sugar transport system (permease) (bi... 98 1e-19 dbj|BAB06444.1| (AP001516) lactose transport system (permease) [... 97 3e-19 gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae] 95 1e-18 dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Ba... 95 1e-18 pir||D82557 ABC transporter sugar permease XF2447 [imported] - X... 94 2e-18 dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Ba... 92 6e-18 pir||G75206 maltodextrin transport system permease protein PAB01... 92 6e-18 emb|CAB59589.1| (AL132662) putative sugar transporter inner memb... 91 2e-17 sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN L... 90 2e-17 emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaero... 90 2e-17 emb|CAB65652.1| (AJ252161) putative maltose transport membrane p... 90 3e-17 dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter ... 89 5e-17 pir||T37130 probable transport system integral membrane protein ... 89 7e-17 dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane ... 89 7e-17 pir||A72283 maltose ABC transporter, permease protein - Thermoto... 89 9e-17 gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida] 88 2e-16 sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 87 2e-16 emb|CAB55715.1| (AL117387) putative binding protein dependent tr... 87 2e-16 pir||B69588 L-arabinose transport (integral membrane protein) ar... 87 3e-16 emb|CAA61935.1| (X89810) putative integral membrane protein [Bac... 87 3e-16 emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycob... 87 3e-16 pir||H75503 maltose ABC transporter, permease protein - Deinococ... 87 4e-16 pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC... 86 5e-16 sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 86 6e-16 emb|CAB59596.1| (AL132662) probable sugar transporter inner memb... 86 6e-16 sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 85 8e-16 pir||T36087 probable binding protein dependent transport protein... 85 8e-16 pir||S77536 lactose transport system permease protein lacF - Syn... 85 1e-15 pir||G72379 sugar ABC transporter, permease protein - Thermotoga... 85 1e-15 gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus... 84 2e-15 pir||S63615 malF protein homolog cymF - Klebsiella oxytoca >gi|8... 84 2e-15 pir||G70943 hypothetical protein Rv2040c - Mycobacterium tubercu... 83 3e-15 dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4] 83 4e-15 emb|CAC11828.1| (AL445065) probable sugar ABC transporter, perme... 82 9e-15 emb|CAB71197.1| (AL138538) putative sugar transport system perme... 82 1e-14 sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PER... 80 3e-14 sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANS... 80 3e-14 sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ... 80 3e-14 dbj|BAB04621.1| (AP001510) L-arabinose transport system (permeas... 80 4e-14 sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 80 5e-14 pir||F72292 glycerol-3-phosphate ABC transporter, permease prote... 80 5e-14 gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti] 80 5e-14 pir||H70033 maltodextrin transport system permease homolog yvdH ... 79 8e-14 dbj|BAB04837.1| (AP001511) lactose transport system (permease) [... 79 8e-14 sp|P26467|MALF_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 78 1e-13 pir||T35671 probable transmembrane transport protein - Streptomy... 78 1e-13 emb|CAB55533.1| (AL117322) putative binding-protein-dependent tr... 78 1e-13 sp|P02916|MALF_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 77 2e-13 sp|P18812|MALF_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 77 2e-13 sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 77 3e-13 pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307... 77 3e-13 emb|CAB95283.1| (AL359779) putative sugar transport integral mem... 76 4e-13 gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner memb... 76 5e-13 gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane p... 76 5e-13 emb|CAB61807.1| (AL133236) putative integral membrane transport ... 76 5e-13 pir||E70703 probable uspA protein - Mycobacterium tuberculosis (... 75 9e-13 emb|CAB86098.1| (AL163003) putative sugar transporter inner memb... 75 9e-13 sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 75 1e-12 gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Th... 75 1e-12 gb|AAF70321.1|AF260245_1 (AF260245) MalF [Vibrio cholerae] 75 1e-12 pir||G82397 maltose ABC transporter, permease protein VCA0944 [i... 75 1e-12 emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyc... 74 2e-12 dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bac... 74 2e-12 emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/m... 74 2e-12 emb|CAB61917.1| (AL133278) putative transport system permease pr... 73 6e-12 dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system... 72 1e-11 pir||T36913 probable integral membrane sugar transport protein -... 71 1e-11 pir||F75187 probable sugar abc transporter, permease protein PAB... 71 1e-11 pir||T47064 hypothetical protein [imported] - Yersinia pestis >g... 71 2e-11 dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus ... 71 2e-11 pir||T35790 probable transmembrane sugar transport protein - Str... 70 3e-11 gb|AAC04469.1| (AF007800) MtlF [Pseudomonas fluorescens] 70 4e-11 pir||T46751 inner membrane protein malF [validated] - Thermococc... 70 4e-11 pir||E72357 sugar ABC transporter, permease protein - Thermotoga... 70 4e-11 gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus s... 69 5e-11 sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROT... 69 7e-11 emb|CAB61178.1| (AL132973) putative binding protein dependent tr... 69 9e-11 dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system... 69 9e-11 >pir||C75208 sugar transport system permease protein PAB2230 - Pyrococcus abyssi (strain Orsay) >gi|5457623|emb|CAB49114.1| (AJ248283) sugar TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus abyssi] Length = 313 Score = 637 bits (1625), Expect = 0.0 Identities = 313/313 (100%), Positives = 313/313 (100%) Query: 1 MKFDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYR 60 MKFDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYR Sbjct: 1 MKFDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYR 60 Query: 61 LVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM 120 LVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM Sbjct: 61 LVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM 120 Query: 121 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS 180 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS Sbjct: 121 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS 180 Query: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP Sbjct: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 Query: 241 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL Sbjct: 241 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 Query: 301 KFEEMIKKPRGDL 313 KFEEMIKKPRGDL Sbjct: 301 KFEEMIKKPRGDL 313 >pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii >gi|3256591|dbj|BAA29274.1| (AP000001) 312aa long hypothetical protein [Pyrococcus horikoshii] Length = 312 Score = 580 bits (1478), Expect = e-164 Identities = 280/310 (90%), Positives = 296/310 (95%) Query: 4 DSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVH 63 + + RALSFFLSPM++MVALFYLIPL+LT+YISFTGMRNWNVERYL DFVG YNY RL H Sbjct: 3 NDKVRALSFFLSPMLLMVALFYLIPLVLTVYISFTGMRNWNVERYLGDFVGAYNYERLFH 62 Query: 64 MFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPI 123 MFKYDP+FKAV+LTTIVFV ITLIINVLGGLGLAL +FFMSEKP + FRLLWLLPRMSPI Sbjct: 63 MFKYDPSFKAVVLTTIVFVMITLIINVLGGLGLALGSFFMSEKPSTIFRLLWLLPRMSPI 122 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 AVYSLVWYYFFHGS IGTLNAILM+LG IN+PIPWGQ VPWGAWSIIIFVNGLVGVSFGM Sbjct: 123 AVYSLVWYYFFHGSEIGTLNAILMKLGFINEPIPWGQIVPWGAWSIIIFVNGLVGVSFGM 182 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 IVFTSALNQIPKELVIAARVDGASAWQIS+RIL PLMKWHFLYVLTWQFLSLLTTYPHLF Sbjct: 183 IVFTSALNQIPKELVIAARVDGASAWQISKRILLPLMKWHFLYVLTWQFLSLLTTYPHLF 242 Query: 244 LLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 LLVEWDLV+RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGI+GG+ITLKVLKFE Sbjct: 243 LLVEWDLVNRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIVGGMITLKVLKFE 302 Query: 304 EMIKKPRGDL 313 EMIKKPRGDL Sbjct: 303 EMIKKPRGDL 312 >pir||A72451 probable lactose transport system permease protein APE2253 - Aeropyrum pernix (strain K1) >gi|5105954|dbj|BAA81265.1| (AP000064) 276aa long hypothetical lactose transport system permease protein [Aeropyrum pernix] Length = 276 Score = 347 bits (882), Expect = 8e-95 Identities = 167/276 (60%), Positives = 210/276 (75%), Gaps = 2/276 (0%) Query: 40 MRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALA 99 MRNWNV+ YL D VG YNY LVH KYDP F+ ++TT+VFV +TL++NVLGGL LA+ Sbjct: 1 MRNWNVDAYLFDIVGLYNYKVLVHFAKYDPMFRNALITTVVFVAVTLVVNVLGGLTLAIL 60 Query: 100 TFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWG 159 TFF+ E+ +RLLWLLPRM+P+AVYSL+WYYFFH +IGTLN IL+ G+I++PI WG Sbjct: 61 TFFLEERISIHYRLLWLLPRMTPVAVYSLLWYYFFHSDAIGTLNRILLLAGVIDKPINWG 120 Query: 160 Q-NVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFP 218 +P G W I+IFVNGLVGVSFGMIVF SA+ IP E + AARVDGAS I RRI+ P Sbjct: 121 SYMLPLGTWWILIFVNGLVGVSFGMIVFYSAIRSIPWEYIAAARVDGASNLVIIRRIIVP 180 Query: 219 LMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVDRDYGTTLALYVFNTAF-GRGEQDQGL 277 +++WH L+V WQ LSLLTTY H+FLL EW +VDR +G T +L VFN AF GE QGL Sbjct: 181 MIRWHLLFVTVWQMLSLLTTYTHIFLLYEWGVVDRTWGQTWSLLVFNLAFLPVGELRQGL 240 Query: 278 AAAAAVILSILGIIGGVITLKVLKFEEMIKKPRGDL 313 AAAAA +L ++G I G++TL++L F+ MI +PRGD+ Sbjct: 241 AAAAATVLVVIGAILGLVTLRILGFQRMITRPRGDI 276 >pir||C72378 sugar ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4980925|gb|AAD35504.1|AE001721_3 (AE001721) sugar ABC transporter, permease protein [Thermotoga maritima] Length = 294 Score = 185 bits (465), Expect = 6e-46 Identities = 113/301 (37%), Positives = 172/301 (56%), Gaps = 24/301 (7%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMR---NWNVERYLHDFVGTYNYYRLVHMFKYDPT 70 LSP++I V +F++IP+ILT+ I+FT M WN FVG N+ + D Sbjct: 10 LSPLLIFVIIFFVIPVILTVVIAFTDMDYSFTWN-------FVGFQNFKDI----STDFI 58 Query: 71 FKAVILTTIVFVGITL-IINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLV 129 VI T ++ TL + N+ L L+L T +S++ G+ FR LW+LPR++P VY L+ Sbjct: 59 IPRVIANTFIYTFGTLGLFNLGTALLLSLLTTSISDRWGNFFRTLWMLPRLTPSVVYGLL 118 Query: 130 WYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSA 189 W + F + G +N I GL P W + P W +IIF NG +G S GM+VFT+A Sbjct: 119 WLWMFDPTEYGLVNFIRGLFGL--PPQDWLHSAPM--W-MIIFANGFIGASMGMLVFTAA 173 Query: 190 LNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWD 249 + IP++ AAR+DGAS + I R+I PL+KWH L+V +Q LSLL ++ ++ ++ + Sbjct: 174 IKSIPEDYYRAARIDGASWFMIVRKITLPLIKWHLLFVTAYQTLSLLASFEYILIITDGG 233 Query: 250 LVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEMIKKP 309 V R ALY ++ AF G AA ++IL I+G+I + +K FE +++KP Sbjct: 234 PVYRT--EVWALYTYHNAFSHFR--FGYGAALSIILVIIGVISAFVYMKFFGFESLMEKP 289 Query: 310 R 310 + Sbjct: 290 K 290 >pir||D72331 sugar ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4981341|gb|AAD35893.1|AE001748_9 (AE001748) sugar ABC transporter, permease protein [Thermotoga maritima] Length = 300 Score = 99.5 bits (244), Expect = 5e-20 Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 30/295 (10%) Query: 12 FFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKY--DP 69 FF++ +++ LF PL+ I ISF Y +D VG Y L + DP Sbjct: 19 FFITIPTLLMVLFIYYPLVFGIKISF----------YQYDIVGESLYIGLKNYVDLLRDP 68 Query: 70 TFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMSPIAVYSL 128 F +++++ L++ L + + LA G + FR L LP ++PI + ++ Sbjct: 69 LFWNAFKNSLLYL---LVVPPLQLISILLAVLLDRAIRGRNLFRTLIFLPVVTPITIAAI 125 Query: 129 VWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTS 188 W + + G +N +L L +I++PI + + P A I+FV G + M+++ + Sbjct: 126 TWQWMYREK--GFINFLLQSLHIIDEPIAFLSD-PKIALFAIMFVTMWKGFGYYMVIYLA 182 Query: 189 ALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 L IP+EL+ AARVDGA Q+ ++ PL+K + L+ T ++ L + ++ + + Sbjct: 183 GLQSIPRELIEAARVDGAKPSQVFFKVTIPLLKPYILFCSTMSSIAALNVFGEIYAMTKG 242 Query: 249 DLVDRDYGTTLALYVFNTAFGRGEQDQ-GLAAAAAVILSILGIIGGVITLKVLKF 302 V T+ ++++N AF E Q G + AAAV+ S + VI +L F Sbjct: 243 GPVHAT--ETMGIFIYNRAF---EYLQFGYSNAAAVLFSFV-----VIAFSLLNF 287 >emb|CAB72405.1| (AL138978) putative integral membrane transport protein [Streptomyces coelicolor A3(2)] Length = 313 Score = 99.5 bits (244), Expect = 5e-20 Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 30/305 (9%) Query: 5 SRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM 64 S FRAL +SP ++++ LF P++ + I+FT ++ + FVG N+ R Sbjct: 32 SLFRALP--VSPAVVLLLLFLAGPIVYCVVIAFTDLQLTGQAQ--ESFVGFDNFTRA--- 84 Query: 65 FKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFM-SEKP-----GSAFRLLWLLP 118 FK D F + T+VF ++ +I LGLALA+ + KP G W+LP Sbjct: 85 FK-DEAFLNAVWLTLVFTVLSSLIGQ-NTLGLALASLMQRASKPVRTLTGGIVVTAWVLP 142 Query: 119 RMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVG 178 + V + Y FF GTLNAIL L L +Q W +P A S F N G Sbjct: 143 EV----VAGFLLYAFFRRE--GTLNAILDWLHLPSQN--WLFTLPILAVS---FANVWRG 191 Query: 179 VSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTT 238 +F M+V+++ALN+IPKE+ AA DGAS W+ I P+++ L L L+ Sbjct: 192 TAFSMLVYSAALNEIPKEVTEAAEADGASGWRRMWHITLPMIRRSIGTNLMLNTLQTLSV 251 Query: 239 YPHLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLK 298 + ++++ TL L+++ AF G A A++L ++G + V+ L+ Sbjct: 252 FGLIWVMTRGG--PSGNSQTLPLFMYEQAFQNSL--IGYGTAVALLLLLIGSLFSVVYLR 307 Query: 299 VLKFE 303 +L+ E Sbjct: 308 LLRTE 312 >dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Bacillus halodurans] Length = 305 Score = 99.5 bits (244), Expect = 5e-20 Identities = 80/290 (27%), Positives = 134/290 (45%), Gaps = 21/290 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+SP I+ A+F L P+I + Y+SF N Y VG N+ + + DPTF Sbjct: 23 FISPFFILFAVFGLFPMIFSFYLSFFRWDGLNPMSY----VGLANFQLIFN----DPTFF 74 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + I T + + + ++ G+ LA A + FR L LP ++ I ++++ Sbjct: 75 SAIKNTFIIGILGTLPQIIVGILLAFALNSALIRFQHTFRTLVFLPYITSIVAVAIIFGL 134 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLV---GVSFGMIVFTSA 189 F+ G N +L + P+ W Q W + I + +V V + I+F + Sbjct: 135 VFNNQPFGLANYVLSLFNI--DPVRWSQEY----WPVKIAIATMVFWRWVGYNTIIFLAG 188 Query: 190 LNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWD 249 + IPKEL AA++DGA+ Q R I P++K L+V+ + L + + + Sbjct: 189 MQSIPKELYEAAKIDGATIGQQIRLITVPMLKPFILFVVFTATIGSLQLFTEPLIFLGRG 248 Query: 250 LVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 L R+ G T+ Y++ AF G A+AAA++L + I I L + Sbjct: 249 L--REEGITMVAYLWRDAFVLNA--FGTASAAAIVLFFIIITLTAINLLI 294 >emb|CAB95276.1| (AL359779) putative sugar transport integral membrane protein [Streptomyces coelicolor A3(2)] Length = 321 Score = 98.7 bits (242), Expect = 8e-20 Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 14/292 (4%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P ++ + LF+ PL+ + +SF F G N+ + D F Sbjct: 41 FVAPAVVFMLLFFGYPLVRNVVMSFQDYTPKTFFTGEAPFNGADNWSNVFQ----DALFG 96 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKP-GSAFRLLWLLPRMSPIAVYSLVWY 131 + T+VF +L+ +GLALA FF P R L LLP + P+ V +VW Sbjct: 97 KALWHTLVFTAGSLLGQFC--IGLALAVFFSRRFPLNGVLRSLILLPWLVPMVVSGIVWR 154 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 + G LN+ L LG I PW + S+I+ VN +G+ F M++ L Sbjct: 155 RILDQDT-GVLNSFLDTLG-IGGHTPWLTSPEMALLSVIL-VNIWIGIPFNMVILYGGLQ 211 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 +IPKEL AA +DGASAW+ R + P++K VL F+S + + L + Sbjct: 212 EIPKELHEAAALDGASAWRTFRSVTLPMLKPVVTVVLVLGFMSTVKILDLILALTDGGPA 271 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 D TL + +F + D G A +L ++ + V L+ + E Sbjct: 272 DAT--QTLGTLTYQNSF--VQLDFGAGAVVGNVLILISAVFAVFYLRANRTE 319 >dbj|BAB05584.1| (AP001513) sugar transport system (permease) (binding protein dependent transporter) [Bacillus halodurans] Length = 309 Score = 97.9 bits (240), Expect = 1e-19 Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 21/291 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P II A+F L P++ +IY+SFT +N + G NYYRL F D F+ Sbjct: 33 FIAPPIIGFAIFALGPMLYSIYVSFTDFDLYNEPVW----TGADNYYRL---FVTDDLFR 85 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T + + + I + LG+A+A K + FR + LP +S + +L+W + Sbjct: 86 KTVFNTF-YAALGIPIGMAVSLGIAVA-LNQKVKGIALFRTAFFLPAVSSVVAITLLWRW 143 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVG-VSFGMIVFTSALN 191 F+ + G LN +L +G I+ P W + W ++II G+ G + MI++ +AL Sbjct: 144 IFN-ADFGLLNIMLNYVG-IHGP-GWLSDEKWAMPAMII--QGVWGGLGINMILYLAALQ 198 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 + L AA +DG +AWQ I P + ++L + L + ++ E Sbjct: 199 GVNPALYEAADIDGGNAWQKFIHITVPSISPTTFFILITSTIGALQDFQRFMIMTEG--- 255 Query: 252 DRDYG-TTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLK 301 +Y TT+ Y+F AF + G A+A A +L I+ +I +I K+ K Sbjct: 256 GPNYSTTTVVYYLFLNAF--RYMEMGYASAMAWVLGIIILIITIINFKLAK 304 >dbj|BAB06444.1| (AP001516) lactose transport system (permease) [Bacillus halodurans] Length = 290 Score = 96.7 bits (237), Expect = 3e-19 Identities = 68/287 (23%), Positives = 139/287 (47%), Gaps = 15/287 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+S + + +FY P++ + +SF N+E +VG NY RL + DPTF Sbjct: 14 FISLAVAAITIFYFYPMLQALLLSFQSGMGANLE-----YVGLANYIRLFN----DPTFL 64 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T++++ I + + ++ L ++ + K S FR+ LP ++ + YS+++ Y Sbjct: 65 TALKNTLLYLLIQVPLMIVLALIFSVLLNDATLKFRSFFRIAIFLPCVTSLVAYSVIFKY 124 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F G +N L+ + LI+ PI W + W +II+ + + MI + S+L Sbjct: 125 LF--GMDGLVNQFLLNVSLISAPIQWLSDPFWAKVTIIVAITWR-WTGYNMIFYLSSLQN 181 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 + + + AA++DGA+ +Q +I P++K L+ + L + + + Sbjct: 182 VDQSIYEAAKIDGATPFQQFTKITIPMLKPIILFTSITSTIGTLQIFDEVVNITNGG--P 239 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 + +++ Y++N +F D G A+ + ++ +L I+ ++ KV Sbjct: 240 GNATLSISQYIYNLSF-EYTPDFGYASTVSYVIVMLVIVLSIVQFKV 285 >gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae] Length = 294 Score = 94.8 bits (232), Expect = 1e-18 Identities = 76/275 (27%), Positives = 136/275 (48%), Gaps = 14/275 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+ P +I+V L ++ P +I+ SFT N ++ + FVG NY ++ DP F Sbjct: 12 FVLPAMIIVGLLFVYPFFSSIFYSFT---NKHLIMPNYKFVGLANYKAVLS----DPNFF 64 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 +I + +L+ VL G LALA + +R L ++P P V + W + Sbjct: 65 NAFFNSIKWTIFSLVGQVLVGFVLALALHRVRHFK-KLYRTLLIVPWAFPTIVIAFSWQW 123 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 +G G L ++++LGL+ + + W A+ ++F+N G M+ SAL Sbjct: 124 ILNGV-YGYLPNLIVKLGLMEHTPAFLTDSTW-AFLCLVFINIWFGAPMIMVNVLSALQT 181 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 +P+E AA++DGAS+WQ+ + I+FP +K ++ + + + + ++L+ + Sbjct: 182 VPEEQFEAAKIDGASSWQVFKFIVFPHIKVVVGLLVVLRTVWIFNNFDIIYLITGGGPAN 241 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSI 287 TTL ++ +N G G + G A+A V+L I Sbjct: 242 AT--TTLPIFAYN--LGWGTKLLGRASAVTVLLFI 272 >dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Bacillus halodurans] Length = 304 Score = 94.8 bits (232), Expect = 1e-18 Identities = 84/302 (27%), Positives = 142/302 (46%), Gaps = 18/302 (5%) Query: 5 SRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM 64 S+ +LS+ P ++ V F + P + I ISFT NWN D+VG Y R+ Sbjct: 18 SKRSSLSWMYLPAVLAVVTFIVYPFLNGIRISFT---NWNGFSQSFDWVGFAQYERMFT- 73 Query: 65 FKYDPTFKAVILTTIVF-VGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPI 123 DPT V+ T+++ +G TL+ N++G LG AL S + + R + LP + Sbjct: 74 ---DPTTWLVVKNTLLYGIGSTLLQNLIG-LGYALL-LNQSIRMRTITRTIIYLPVIISP 128 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 V +WY+FF G +N L G QP+ N W +I+FVN V M Sbjct: 129 LVMGYIWYFFFAYQG-GAMNDALTFFGF--QPLNILGNPAVNPW-LIVFVNTYQFVGIAM 184 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 I++ + L I K+ AA++DGAS++Q + I PL+ + + L + + Sbjct: 185 IIYLAGLQSISKDYYEAAQLDGASSFQQFKNITLPLLMPSITINVVLNIIGGLKLFDVII 244 Query: 244 LLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 L + +++ ++++ F R QD G AA V ++ + ++ ++ L K + Sbjct: 245 ALTGGG--PGNASQSMSTFMYHLYFSR--QDAGYAATQGVFMAFIILVLSILALVYFKRK 300 Query: 304 EM 305 E+ Sbjct: 301 EV 302 >pir||D82557 ABC transporter sugar permease XF2447 [imported] - Xylella fastidiosa (strain 9a5c) >gi|9107640|gb|AAF85246.1|AE004053_9 (AE004053) ABC transporter sugar permease [Xylella fastidiosa] Length = 293 Score = 94.0 bits (230), Expect = 2e-18 Identities = 73/286 (25%), Positives = 132/286 (45%), Gaps = 15/286 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLH-DFVGTYNYYRLVHMFKYDPTF 71 F P ++++ +F+ +P+++ + +S T + + ++ FVG NY L+H P F Sbjct: 11 FAGPAVLVIGMFFGVPVLMALVLSLTDFDLYALANPMYLRFVGLDNYLELLHT----PLF 66 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWY 131 + T FV + + +++ LG AL + + FR + P ++ + +L+W Sbjct: 67 WKALWNTTYFVLLGMPMSITVSLGAALLLNSRAARFKGLFRTVLFAPVVTTLVAVALIWR 126 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 Y FH G +N +L +G+ PI W + P A +I+ + M++F + L Sbjct: 127 YLFH-LKYGVVNWLLNCVGI--HPIDWLGD-PHLAMPMIMLFAVWKNFGYNMVIFLAGLQ 182 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 IP++L AAR+DGAS WQ I P++ + V ++T + L E ++ Sbjct: 183 AIPQDLYEAARIDGASKWQQFLHITLPMLGPVLMVV------GIITVSGYFQLFAEPYVM 236 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITL 297 R + V F G + L A+AV + ++ GV TL Sbjct: 237 TRGDPLQSTVSVLYFMFEEGFKWWNLGRASAVAFLLFLVVLGVTTL 282 >dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Bacillus halodurans] Length = 300 Score = 92.4 bits (226), Expect = 6e-18 Identities = 77/294 (26%), Positives = 142/294 (48%), Gaps = 15/294 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 FL+P ++ + +F L+P++ IY+SF + N+ +FVG NY R+ ++ + Sbjct: 20 FLTPALVTIGVFILLPILYAIYLSFQKV---NLLAGFSEFVGFNNYARITDDYRAGIALR 76 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAF-RLLWLLPRMSPIAVYSLVWY 131 T +V I + + L L LA ++ G+ F R+++ LP ++ AV +L++ Sbjct: 77 ----NTAFYVAIVVPTQTI--LALILAACLNAKIKGTNFFRVVFFLPTLTSSAVLALIFM 130 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 + ++ + G +N +L LGL P P A I+ +N F M+++ +AL Sbjct: 131 FMYNNQN-GLVNQVLASLGL---PTYNWLGDPSVALLAIMIMNIWATAPFYMVIYLAALK 186 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 IP L AA +DGAS Q R I P+++ +V+ + + ++ Sbjct: 187 DIPASLYEAADLDGASTIQKFRYITVPMLRPITSFVVIMGIIGTFQLFDQSYIFSGGSGG 246 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEM 305 + T+ L ++ AF +Q G AAA A +L+++ +I +I K K E++ Sbjct: 247 PDNSTLTIVLLIYQYAFQSYDQ-MGYAAALAFLLAVIILIATLIQRKFQKNEQV 299 >pir||G75206 maltodextrin transport system permease protein PAB0120 - Pyrococcus abyssi (strain Orsay) >gi|5457611|emb|CAB49102.1| (AJ248283) MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus abyssi] Length = 302 Score = 92.4 bits (226), Expect = 6e-18 Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 19/298 (6%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMR--NWNVERY-LHDFVGTYNYYRLVHMFKYDPTFK 72 P I F L P+I +IY++FT + N+ VE+ FVG N+ ++ D F+ Sbjct: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS----DEKFR 74 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T +FV ++ + VL G+GL+L + +R L ++P P+ VW + Sbjct: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F G +N +L +G+ N P W N P+ A+ + + + F M V T+AL Sbjct: 135 MFD-PVFGPINQLLKSIGISNPP-NW-INDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMK--WHFLYVLTWQFLSLLTTYPHLFLLVEWDL 250 +P L+ AA +DGA+ WQ R ++ P + F +LT P+L+ L Sbjct: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY---NAGL 248 Query: 251 VDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEMIKK 308 + + + LY F AFG G A A VI +++ I I +K+ + +E K+ Sbjct: 249 FEDKF---ILLYGFRKAFG-ATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAKE 302 >emb|CAB59589.1| (AL132662) putative sugar transporter inner membrane protein [Streptomyces coelicolor A3(2)] Length = 302 Score = 90.9 bits (222), Expect = 2e-17 Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 32/304 (10%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKA 73 ++P ++ + L PL + ISF R + DFVG NY L+ DP F Sbjct: 17 IAPAVLGMLYLLLYPLARAVLISFQDFRLRQLILGDADFVGLRNYRTLLG----DPEFWE 72 Query: 74 VILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWL----LPRMSPIAVYSLV 129 V+ T VF+ + ++ ++ L+ M+E+ G A R + L L P+ + V Sbjct: 73 VVRRTFVFMAVGVVAIMV----LSTLVALMTERLGRAARTVVLSSLVLVWAVPVVAATTV 128 Query: 130 WYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPW-----GAWSIIIFVNGLVGVSFGMI 184 + + FH S G +N L LG + + PW A+ I++ + V F I Sbjct: 129 FQWLFH-SEFGIVNETLTGLGFESY-----EGYPWFAHGGAAFGIVVVLIVWQSVPFAAI 182 Query: 185 VFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFL 244 SAL +P EL +AR+DGA A ++ R + FPL++ F+ VL+ + + + +++ Sbjct: 183 TLYSALVTVPAELYESARMDGAGAARVFRSVTFPLIRPIFMLVLSLEVIWTFKAFVQIWV 242 Query: 245 LVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 + + T L +Y TA D G AA+ +L + G++ VL F + Sbjct: 243 MTRGG--PGEATTILPVYAVQTALAGQRYDLGSAASMLTVLLMSGVL-------VLYFRQ 293 Query: 305 MIKK 308 + ++ Sbjct: 294 LFRQ 297 >sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN LACF >gi|72502|pir||MMAGCF membrane protein lacF - Agrobacterium radiobacter >gi|38969|emb|CAA47162.1| (X66596) lacF [Agrobacterium radiobacter] Length = 298 Score = 90.5 bits (221), Expect = 2e-17 Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 12/279 (4%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P I ++++F L P++ ++ +S R ++ F GT N RL + DP F Sbjct: 20 FVAPAIALISVFMLYPILRSLVLSLYTGRGMMLK-----FSGTGNLVRLWN----DPVFW 70 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T++F + + I + L LA + FR + LP +S + YS+++ Sbjct: 71 QALQNTVIFFVVQVPIMITMALILAAMLNNPKLRYSGLFRTMIFLPCVSSLVAYSILFKS 130 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F S G +N L+ +G+I +PI W + W III + + MI + +AL Sbjct: 131 MF--SLDGVVNNTLLAIGIIGEPIGWLTDPFWAKVLIIIAITWR-WTGYNMIFYLAALQN 187 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 I + + AA++DG +W + P++K L+ + L + ++ E Sbjct: 188 IDRSIYEAAKIDGVPSWGRFAFLTIPMLKPVILFTTITSTIGTLQLFDEVYNFTEGTGGP 247 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGII 291 + TL+LY++N F A + VI+ ++ ++ Sbjct: 248 ANSTLTLSLYIYNLTFRFMPSFSYAATVSYVIVLMVAVL 286 >emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaerobacter brockii] Length = 303 Score = 90.5 bits (221), Expect = 2e-17 Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 23/299 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F P I++ +F L PLI T Y+S T M N + FVG N+ +L F + K Sbjct: 21 FTLPFIVIFLVFNLYPLIYTFYLSLTDMTLMNSS---YHFVGLANFKQL---FSDNYFLK 74 Query: 73 AVILTTIVFVGITLIINVLGGLGLA--LATFFMSEKPGSAFRLLW----LLPR-MSPIAV 125 +VI T ++ +IN + L +A LA +F++ + F LW LP + P+AV Sbjct: 75 SVINTWKIW-----LINFIPQLTIAMLLAIWFVNNRLKIKFIGLWRTIYYLPNILMPVAV 129 Query: 126 YSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIV 185 +L + +F S G +N I +R G++ + + ++ W I+ F+ + +I+ Sbjct: 130 AALFYNFF---SLYGPVNQIAVRTGILKEAFDFFRSTTW-TQLIVAFIQWWMWYGVTIIL 185 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 + L+ I +A VDGA++WQ+ +I PL+K +YVL + + +LL Sbjct: 186 LMAGLSSISPSYYESALVDGANSWQMFTKITLPLLKPVLIYVLVTSLSGGMQMFDIPYLL 245 Query: 246 VEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 + T+++ ++ F G+ G AA+ V++ ++ I I + +LK E Sbjct: 246 TDGTGSPDGAIRTMSVLMY-MKFSSGDGYIGAAASVGVMIFLITAIAAFIIINLLKERE 303 >emb|CAB65652.1| (AJ252161) putative maltose transport membrane protein [Alicyclobacillus acidocaldarius] Length = 321 Score = 90.1 bits (220), Expect = 3e-17 Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 14/211 (6%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYL-HDFVGTYNYYRLVHMFKYDPT- 70 +LSP ++ + + ++P+ TIYISFT N+N +L + FVG NY L++ +DP Sbjct: 27 YLSPALVTICVLSILPIFYTIYISFT---NFNQMHFLSYQFVGLKNYEELLN--PHDPLS 81 Query: 71 --FKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSL 128 F + T+V+ T + L GL LA+ + + +R L ++P P + L Sbjct: 82 NLFLPTFIWTLVYALCTTALAYLVGLFLAVLLNNKHMRERTLYRTLLIVPWAVPNLISML 141 Query: 129 VWYYFFHGSSIGTLNAILMRLGLINQP-IPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 W + G +NA+L G+ P IPW + W ++I+ VN G + M V Sbjct: 142 AWQGLLN-DQYGQINALLH--GVFGLPRIPWLTSALWARIAVIM-VNVWAGFPYMMTVCL 197 Query: 188 SALNQIPKELVIAARVDGASAWQISRRILFP 218 AL IP + AA +DGA+ WQ+ R + P Sbjct: 198 GALQSIPTDQYEAAEIDGANWWQVFRYVTMP 228 >dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter (permease) [Bacillus halodurans] Length = 315 Score = 89.3 bits (218), Expect = 5e-17 Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 35/311 (11%) Query: 2 KFDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHD-------FVG 54 K + R + +L P +++ ++F P+I T+Y+SF +L D FVG Sbjct: 26 KRTANVRIAALYLFPSLLLFSIFLFYPMIRTVYLSF----------FLTDAQGNAALFVG 75 Query: 55 TYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLL 114 NY +++F+ DP F+ T +FV T+ VL L LAL G FR + Sbjct: 76 LENY---LYLFQSDP-FRKSASATFLFVLYTVPTGVLLALFLALIANEKLRGIG-LFRTI 130 Query: 115 WLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVN 174 + +A +++W + FH ++G LN+IL +G+ IPW + W SI I Sbjct: 131 FSSTMGMSVAASAVIWLFLFH-PTVGILNSILGFIGI--DSIPWLLDPKWALISIAITTI 187 Query: 175 GLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLS 234 + F +V L I + L +AR+DGA + RI P++ +++T F+ Sbjct: 188 WM-NTGFSFLVLLGGLQNIDQHLYESARIDGAGYFYQLFRITVPMLSPTLFFIITITFIH 246 Query: 235 LLTTYPHLFLLVEWDLVDRDYGTTLALY-VFNTAFGRGEQDQGLAAAAAVILSILGIIGG 293 ++ + +L + T L +Y ++ AF G A+A AVIL +L ++ Sbjct: 247 SFQSFGQVDILTGGGPAE---ATNLIVYSIYQDAF--INYQFGTASAQAVILFLLVLL-- 299 Query: 294 VITLKVLKFEE 304 +TL KF E Sbjct: 300 -LTLVQFKFGE 309 >pir||T37130 probable transport system integral membrane protein - Streptomyces coelicolor >gi|5738807|emb|CAB52981.1| (AL109950) putative integral membrane permease [Streptomyces coelicolor A3(2)] Length = 319 Score = 88.9 bits (217), Expect = 7e-17 Identities = 74/286 (25%), Positives = 134/286 (45%), Gaps = 19/286 (6%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P +++VALF L P + TIY SF + ++++ +F DP Sbjct: 45 FMAPAVLLVALFLLAPFVWTIYRSF----------FSDTRTSPFSWFDNYSLFASDPALS 94 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 I T+++V T+ + + LGLA+A + + RL +LP + ++VW + Sbjct: 95 RSIQNTLMWVVGTVALPFV--LGLAIACMTNAGRFSRLARLCVVLPYALSGSAVAVVWNF 152 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 ++ G +N +L LGL + W P G ++I N +I+F L Sbjct: 153 ML--TTDGAVNQVLTALGLDSLAQGWLLTWP-GNTVVMILANAWQATGVAVILFLVGLQS 209 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 IP E + A +DGAS WQ R I+ P ++ + V+ ++ L ++ +++L + Sbjct: 210 IPPETLEAGALDGASGWQQFRHIVLPQLRPVSIIVIGMSLVNGLKSFDLIWVLTQGG--P 267 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLK 298 TLA+ ++N F E G AA AV+L+++ + + L+ Sbjct: 268 GRATETLAVSMYNETF--LELRPGAGAAIAVVLTVIVLAASWLYLR 311 >dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane protein [Thermococcus sp. B1001] Length = 231 Score = 88.9 bits (217), Expect = 7e-17 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 12/222 (5%) Query: 4 DSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMR--NWNVERYLHD---FVGTYNY 58 D + A + P +I F + P++ +IYI+FT + N+ ++ + FVG N+ Sbjct: 2 DKKTIAALALILPGMIAFLFFNIYPILYSIYIAFTNAKLGNFPIQAPTAEPLRFVGLENF 61 Query: 59 YRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLP 118 + DP F++ + T VFV ++ + V+ G+ L++ K +R L ++P Sbjct: 62 RWALS----DPKFRSAFVWTWVFVATSVTLKVVVGILLSVLYNNKYVKGKFFYRALLIIP 117 Query: 119 RMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVG 178 P+ +VW + F +G +N +L LG+ N P W +V WG ++ I + + Sbjct: 118 WALPLLFSVMVWRFMFD-PVVGPINIMLRDLGITNPP-DWMTSVTWGFVALNI-IEVWLA 174 Query: 179 VSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLM 220 F M V TSAL +P L+ AA +DGA+ WQ +++ P++ Sbjct: 175 YPFMMTVITSALQSVPDTLIEAAIIDGANYWQRLTKVVIPIV 216 >pir||A72283 maltose ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4981755|gb|AAD36278.1|AE001777_4 (AE001777) maltose ABC transporter, permease protein [Thermotoga maritima] Length = 577 Score = 88.5 bits (216), Expect = 9e-17 Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 11/251 (4%) Query: 51 DFVGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSA 110 DFVG N+ R+V K F + L T V+ +++++++ GL AL K + Sbjct: 315 DFVGWKNFLRIVKDPKVSGPFFRIFLWTFVWAVLSVVLSLAVGLPFALVLNNPRLKGRNL 374 Query: 111 FRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRL-GLINQPIPWGQNVPWGAWSI 169 +R L ++P P+ + +LVW S G +N L+ L GL +PI W N P+ A Sbjct: 375 YRTLLIIPWAIPVFISALVWRNGLLNESYGVINKFLLPLFGL--EPIKW-FNDPFWARVG 431 Query: 170 IIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLT 229 ++ VN + + M + AL IP EL A +DGA ++ I FPL+ +L Sbjct: 432 VLLVNVWLTFPYMMTISLGALQSIPPELYEVAAIDGAGRFRRFVHITFPLLMTIIAPLLV 491 Query: 230 WQFLSLLTTYPHLFLL------VEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAV 283 F + ++L+ + Y L YV+ AF G Q Q A+A+ Sbjct: 492 SSFAFSFNNFTIIYLITGGGPPIPNSTTPTGYTDILISYVYKLAF-EGGQGQDFGFASAI 550 Query: 284 ILSILGIIGGV 294 + I ++GG+ Sbjct: 551 SILIFFLVGGI 561 >gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida] Length = 294 Score = 87.8 bits (214), Expect = 2e-16 Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 14/288 (4%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+ P I++V++ ++ P + +I+ SFT N N+ + FVG NY ++ DP F Sbjct: 13 FVLPAILVVSVLFIYPFLSSIFYSFT---NKNLIMPHYSFVGLANYRAVLS----DPNFW 65 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 ++ + +L VL G LALA + +++L ++P P V + W + Sbjct: 66 MSFFNSLKWTIFSLTGQVLVGFFLALALNRVKHFKW-LYKILLIIPWAFPTIVIAFSWQW 124 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 +G G L +L++LGL+ + + W A+ ++F+N G M+ SAL Sbjct: 125 ILNGV-YGYLPNMLVQLGLMEIAPNFLSDRTW-AFVCLVFINIWFGAPMIMVNVLSALQT 182 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 +P + AA++DGA+AWQI R I P +K ++ + + + + ++L+ + Sbjct: 183 VPTDQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGPAN 242 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 T+ L +F G G + G ++A V+L I + I K++ Sbjct: 243 ----ATMTLPIFAYDMGWGSKLLGRSSAVTVLLFIFLLSVYFIYFKII 286 >sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1215 >gi|7442715|pir||A71065 probable sugar-binding transport system permease protein - Pyrococcus horikoshii >gi|3257632|dbj|BAA30315.1| (AP000005) 292aa long hypothetical sugar-binding transport system permease protein [Pyrococcus horikoshii] Length = 292 Score = 87.4 bits (213), Expect = 2e-16 Identities = 75/282 (26%), Positives = 128/282 (44%), Gaps = 18/282 (6%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 FL P +I++ +F ++ IYISFT +W + FVG Y +L+H DP F Sbjct: 13 FLIPALILIGIFVYFAVVWNIYISFT---DWRGLIPSYHFVGLAQYKQLIH----DPIFW 65 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + ++ + + + ++L GL LA+ M + S FR +++LP V + +W + Sbjct: 66 TSLRNNLLLILLFVPGSLLLGLFLAI-LLDMKVRFESGFRTIYVLPFALSFVVTATLWAW 124 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 + SS G LN + +LGL W + + III + + MI++ + + Sbjct: 125 MYDPSS-GVLNVLFDKLGLDFLKSGWITDPKIAMYCIIIALIWQFS-GYTMIIYLAGIRS 182 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 IP E A +DGAS WQ+ R I+ P + L + L + + W L Sbjct: 183 IPIEQYEGALIDGASTWQLYRYIVIPQLTKPTLSAFVVLMVFSLKAFDFI-----WVLTR 237 Query: 253 RDYGTT---LALYVFNTAFGRGEQDQGLAAAAAVILSILGII 291 GT+ LA+ ++ F + G A A ++L L ++ Sbjct: 238 GGPGTSTFILAIEMYKETFAKTNFAYGAAIATILLLMALVVV 279 >emb|CAB55715.1| (AL117387) putative binding protein dependent transport protein [Streptomyces coelicolor A3(2)] Length = 303 Score = 87.4 bits (213), Expect = 2e-16 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 18/283 (6%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKAVI 75 P +++ ++P+I IY SFT + + +F+G NY MF D ++ Sbjct: 24 PAVLVYVALLVVPVIYAIYYSFTEYNGF--PHRVPEFIGLDNYRT---MFGSDDITGTMV 78 Query: 76 LTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFH 135 +T +V V + +N L LGLAL + + + R++ P + V +W Sbjct: 79 VTAVVAVVGAVAVN-LAALGLALL-LQRTNRFNTFGRVVMFYPHVLSALVVGFLWQAILG 136 Query: 136 GSSIGTLNAILMRLGLINQPIPWGQNVPWGAWS-IIIFVNGLVGVSFGMIVFTSALNQIP 194 G +N +L + G +P+ + W WS I++ V L GV +I++ + L +P Sbjct: 137 PQ--GVVNTMLEKAG--TDSLPFLSDPDWALWSMILVIVWSLFGVQ--LILYLAGLQAVP 190 Query: 195 KELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVDRD 254 +L+ AAR+DGAS WQ R + +P + + +SLL TY + L Sbjct: 191 ADLLEAARIDGASRWQTFRAVTWPSLASTVTVAVITSGISLLKTYDVVVSLTG----GGP 246 Query: 255 YGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITL 297 G+T L A ++D G+A+A AV+L + + + L Sbjct: 247 AGSTKTLAYSILAVSFPQRDIGVASAQAVLLIVAAAVLAITVL 289 >pir||B69588 L-arabinose transport (integral membrane protein) araP - Bacillus subtilis >gi|1770020|emb|CAA99593.1| (Z75208) hypothetical protein [Bacillus subtilis] >gi|2635339|emb|CAB14834.1| (Z99118) integral membrane protein [Bacillus subtilis] Length = 313 Score = 87.0 bits (212), Expect = 3e-16 Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 20/299 (6%) Query: 3 FDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLV 62 F S+ A F +P ++ +F+L P+I +SF + V FVG NY L Sbjct: 25 FYSKKAAPYLFTAPFVLSFLVFFLYPIISVFIMSFQRILPGEVS-----FVGLSNYTAL- 78 Query: 63 HMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSE--KPGSAFRLLWLLPRM 120 +PTF + T+ + TLI VL + L LA F S+ K + F+ +P + Sbjct: 79 ----NNPTFYTALWNTLEYTFWTLI--VLIPVPLLLAIFLNSKLVKFRNIFKSALFIPAL 132 Query: 121 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS 180 + V +++ F N+IL++LG P W N G + +++ + + Sbjct: 133 TSTIVAGIIFRLIFGEMETSLANSILLKLGF--SPQNWMNNEHTGMFLMVLLASWR-WMG 189 Query: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 ++ F + L +PKEL AA +DGA+ + I P +K +YVLT + + Sbjct: 190 INILYFLAGLQNVPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFE 249 Query: 241 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 ++L + + + G TL Y++ G + G AA ++L I+ ++ +I+LK+ Sbjct: 250 ESYVLWQ-NNSPGNIGLTLVGYLYQQ--GLAYNEMGYGAAIGIVLLIVILVVSLISLKL 305 >emb|CAA61935.1| (X89810) putative integral membrane protein [Bacillus subtilis] Length = 313 Score = 87.0 bits (212), Expect = 3e-16 Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 20/299 (6%) Query: 3 FDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLV 62 F S+ A F +P ++ +F+L P+I +SF + V FVG NY L Sbjct: 25 FYSKKAAPYLFTAPFVLSFLVFFLYPIISVFIMSFQRILPGEVS-----FVGLSNYTAL- 78 Query: 63 HMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSE--KPGSAFRLLWLLPRM 120 +PTF + T+ + TLI VL + L LA F S+ K + F+ +P + Sbjct: 79 ----NNPTFYTALWNTLEYTFWTLI--VLIPVPLLLAIFLNSKLVKFRNIFKSALFIPAL 132 Query: 121 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS 180 + V +++ F N+IL++LG P W N G + +++ + + Sbjct: 133 TSTIVAGIIFRLIFGEMETSLANSILLKLGF--SPQNWMNNEHTGMFLMVLLASWK-WMG 189 Query: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 ++ F + L +PKEL AA +DGA+ + I P +K +YVLT + + Sbjct: 190 INILYFLAGLQNVPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFE 249 Query: 241 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 ++L + + + G TL Y++ G + G AA ++L I+ ++ +I+LK+ Sbjct: 250 ESYVLWQ-NNSPGNIGLTLVGYLYQQ--GLAYNEMGYGAAIGIVLLIVILVVSLISLKL 305 >emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycobacterium leprae] Length = 319 Score = 87.0 bits (212), Expect = 3e-16 Identities = 88/304 (28%), Positives = 144/304 (46%), Gaps = 30/304 (9%) Query: 5 SRFRALS--FFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLV 62 SR RA + F++P + V++F L PL ++Y+SF + W++ FVG N+ L Sbjct: 24 SRRRAWAGRMFIAPNLASVSVFMLFPLGFSLYMSF---QKWDMFTP-PVFVGLANFQNL- 78 Query: 63 HMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMS 121 F DP F + ++VF T+I VL + L +A + G FR + LP Sbjct: 79 --FTSDPLFLIALCNSVVFTVGTVIPTVL--ISLVVAGVLNQKVKGIGIFRTIVFLPLAI 134 Query: 122 PIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSF 181 V ++VW + F+ + G LN +L +G+ PIPW N W S+ I V+ V F Sbjct: 135 SSVVMAVVWQFIFNTHN-GLLNIMLGWIGI--GPIPWLVNPGWAMASLCI-VSVWRSVPF 190 Query: 182 GMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPH 241 +V +A+ ++PK + AA++DGA + I P ++ +V+ F+ T+ Sbjct: 191 ATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVISFIHAFQTFDL 250 Query: 242 LFLLVEWDLVDRDYGTTLALYV-----FNTAFGRGEQDQGLAAAAAVILSILGIIGGVIT 296 +++ L + G LA YV F AF E A+A+ L I+ +I Sbjct: 251 VYV-----LNGPNGGPELATYVLGIMLFQHAFSFLE----FGYASALALVTFAILLVLIV 301 Query: 297 LKVL 300 L++L Sbjct: 302 LQLL 305 >pir||H75503 maltose ABC transporter, permease protein - Deinococcus radiodurans (strain R1) >gi|6458257|gb|AAF10142.1|AE001914_4 (AE001914) maltose ABC transporter, permease protein [Deinococcus radiodurans] Length = 468 Score = 86.6 bits (211), Expect = 4e-16 Identities = 73/256 (28%), Positives = 113/256 (43%), Gaps = 13/256 (5%) Query: 50 HDFVGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGS 109 + +VG N+ + K V + T+ F T+I+N L GL L + + K + Sbjct: 209 YQYVGLANFQEI--FAKASRALWPVFVWTVAFAFFTVILNALAGLILGILLYNKRLKGRN 266 Query: 110 AFRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSI 169 +R L LP P + +W + G +N L LGL +PW + W SI Sbjct: 267 IYRTLLFLPWAIPAVISVQMWKALLD-QNFGIVNKTLGLLGLF--AVPWLNDPLWAKISI 323 Query: 170 IIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLT 229 + FVN +G + M SAL I ++L AA +DGAS WQ I PL++ F +L Sbjct: 324 L-FVNLWLGFPYMMTATISALATINEDLYEAASIDGASRWQQITNITLPLLRQSFTPILL 382 Query: 230 WQFLSLLTTYPHLFLLVEWDLVDRDYGTT------LALYVFNTAF-GRGEQDQGLAAAAA 282 F + ++LL +T L + +NTAF G Q+ LA+A A Sbjct: 383 STFAFNFNNFGIIYLLTAGGPAQEGRESTAQSTDILLSWGYNTAFASSGGQNYALASAIA 442 Query: 283 VILSILGIIGGVITLK 298 +I+ L + ++ K Sbjct: 443 LIIFFLTLAISLVNFK 458 >pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC 6803) >gi|1001331|dbj|BAA10818.1| (D64006) membrane bound sugar transport protein [Synechocystis sp.] Length = 279 Score = 86.2 bits (210), Expect = 5e-16 Identities = 72/301 (23%), Positives = 140/301 (45%), Gaps = 29/301 (9%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 +++P ++ ++ + ++P + T+Y+SF R+ N FVG NY F+ Sbjct: 2 YVTPALLFLSAYLILPTLETVYLSFFDGRSRN-------FVGLKNYVFAFTDHTMLVAFR 54 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 +L ++ GI++ LGL +A + + + + LP S++W + Sbjct: 55 NNLLWLVLVTGISV------SLGLIIAVLVDKVRYEAIAKSIIFLPMAISFVGASVIWKF 108 Query: 133 FFH-----GSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 + IG LNAI+ LG P+ W +++I + L F M++ + Sbjct: 109 VYAYRPAGAEQIGLLNAIVTSLGFA--PVGWLVERSVNNFALIAIMIWLY-TGFCMVILS 165 Query: 188 SALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE 247 +A+ IP +++ AAR+DGA++WQI RI P+++ L V T + +L + +F++ Sbjct: 166 AAVKGIPADVIEAARIDGANSWQIFWRITIPMIRSTLLVVSTTMVILVLKVFDIVFVMTG 225 Query: 248 WDLVDRDYGTTLALYVFN-TAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEMI 306 + + + +FN FGRG + AVIL +L + + ++ K +E + Sbjct: 226 GNQGTEVIASLMIKEMFNYRNFGRG-------STIAVILLLLIVPVMITNIRRFKAQEKL 278 Query: 307 K 307 + Sbjct: 279 R 279 >sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESP >gi|7442702|pir||G69796 lactose permease homolog yesP - Bacillus subtilis >gi|2633011|emb|CAB12517.1| (Z99107) similar to lactose permease [Bacillus subtilis] Length = 309 Score = 85.8 bits (209), Expect = 6e-16 Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 27/294 (9%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+SP II F +IP+ ++++SFT + ++ +G N+ MF D + Sbjct: 25 FISPFIIGFLCFTVIPMGASLFLSFTSYDLFTAPKW----IGLDNFKE---MFTGDEKYW 77 Query: 73 AVILTTIVFV--GITLIINVLGGLGLALATFFMSEKPGSA-FRLLWLLPRM--SPIAVYS 127 + T +V G+ L + G L +A + G+A +R L+ LP + +AV + Sbjct: 78 QSLKVTFTYVLAGVPLRL----GFALFIAVILNNAAKGTAIYRTLFYLPSIIGGSVAV-A 132 Query: 128 LVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 ++W F G +NA+L +G I+Q I W QN W++I+ G S M++F Sbjct: 133 IMWRNIFGND--GVINALLFFVG-IDQKILWYQNPTSALWTLILLSVWQFGSS--MLIFL 187 Query: 188 SALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE 247 + L IP + AA VDGA+ Q +I P++ + L Q +S T+ +++ + Sbjct: 188 AGLKNIPSSYLEAASVDGANRVQRFFKITLPILTPIIFFNLVMQTISAFMTFTPAYIISK 247 Query: 248 WDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLK 301 + D +LY+F AF + G A+A A ++ +I G+ITL + K Sbjct: 248 GEGGPLDGTLLYSLYLFQRAFNYFQ--MGYASAMAWVML---VIVGLITLILFK 296 >emb|CAB59596.1| (AL132662) probable sugar transporter inner membrane protein [Streptomyces coelicolor A3(2)] Length = 316 Score = 85.8 bits (209), Expect = 6e-16 Identities = 65/285 (22%), Positives = 134/285 (46%), Gaps = 16/285 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+SP +++V ++P++ ++ +SF R+ VG NY L DP F Sbjct: 34 FVSPAVLIVLGLSIVPVVWSLLLSFQASDLVTPSRW----VGLDNYRALAQ----DPNFS 85 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T+++ + + +++L GL LA+ G +R L +P + ++ + Sbjct: 86 QAVRNTLLYTVLYVPLSLLFGLALAMVLNRRIRFVG-LYRTLIFVPFVLSATAQGVL-FS 143 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F G N++L RLG+ +Q + P A +++ + G F ++V+ +AL Sbjct: 144 FILDPEFGAANSVLHRLGVSSQGF---LSDPSQALLVLVAITLWSGTGFCVVVYLAALQD 200 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 +P+ L+ AAR+DGA + R + P + ++++ WQ + L + +++ + + Sbjct: 201 VPQSLIEAARLDGAGRRHLLRHVTMPTLTPVTVFLVLWQAIQSLQVFDLVYVTTKGGPLG 260 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITL 297 T + +++ AF G A+AA V+ LG++ G + + Sbjct: 261 ST--TVIVYFIWEQAFKNATAGYG-ASAAYVLAVALGLVAGAVRI 302 >sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OQ >gi|2182561|gb|AAB91803.1| (AE000089) Y4oQ [Rhizobium sp. NGR234] Length = 309 Score = 85.4 bits (208), Expect = 8e-16 Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 17/292 (5%) Query: 6 RFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWN--VERYLHDFVGTYNYYRLVH 63 R + +F P ++ L +PL+ + Y S TG W+ V DF+G NY ++ Sbjct: 21 RISTVVWFTMPAAAIMLLVLGVPLVYSFYYSLTG---WSLVVPGSDQDFIGLLNYTDVLR 77 Query: 64 MFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPI 123 ++ + ++ +V V + + +L + L L F FR L L+P + Sbjct: 78 SSEFWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRG-----LFRSLMLIPMVITP 132 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 AV + W + S G N +L LG +P+PW A + +I V+ F Sbjct: 133 AVVGIFWKLLYEQDS-GVFNYLLGTLGF--EPVPWLSLTV--ALASVIIVDVWQSTPFFT 187 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 ++ + L + ++ V AA+ DGA+A Q+ R + P + + + ++ + ++ + +F Sbjct: 188 LIILAGLQSLDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVMADFDKIF 247 Query: 244 LLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVI 295 LL + TTL++Y +NT F + + A + ++ +L I +I Sbjct: 248 LLTLGG--PGNVTTTLSVYAYNTGFKVFDIGRTTAISWIYVVFVLAISAPLI 297 >pir||T36087 probable binding protein dependent transport protein - Streptomyces coelicolor >gi|4678630|emb|CAB41203.1| (AL049661) putative binding protein dependent transport protein [Streptomyces coelicolor A3(2)] Length = 327 Score = 85.4 bits (208), Expect = 8e-16 Identities = 74/303 (24%), Positives = 148/303 (48%), Gaps = 17/303 (5%) Query: 6 RFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMF 65 R R L+P ++ + + +P++ T ++FT ++++ F G N+ + Sbjct: 41 RRRVALLLLAPSLVHLVWWIGLPVVATFALAFT---DYDILAGTVTFNGLDNFQEIFS-- 95 Query: 66 KYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSA-FRLLWLLPRMSPIA 124 DPT+ A I T+VF T+ + ++ + + LA + G+A +R LP ++ Sbjct: 96 --DPTWNASIWHTVVFTFFTVPVAMV--IAVVLALLLNVKMRGAAWYRTAVFLPHVTATV 151 Query: 125 VYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMI 184 +LVW + F +G +N +L +G I+ P+ W + W ++I+ V+ G+ M+ Sbjct: 152 AIALVWMWMFE-PRLGVVNTMLGWIG-IDGPV-WLADPDWALTAVIV-VSIWKGIGIKML 207 Query: 185 VFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFL 244 ++ +AL +P ++ AAR+DGAS + I PL+K +VL + + L++ Sbjct: 208 IYLAALQAMPNDVYEAARIDGASQVRQFFSITLPLLKPATFFVLVVSIIDSFQAFDQLYV 267 Query: 245 LVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 L D + T + ++ TAF E + G A A +V+L ++ +I+ ++ E+ Sbjct: 268 LTP-DGGPGNSTTVMTYEIYRTAF--KEFNMGAACAQSVVLFAFLLVLMLISRRLTGKED 324 Query: 305 MIK 307 ++ Sbjct: 325 DVR 327 >pir||S77536 lactose transport system permease protein lacF - Synechocystis sp. (strain PCC 6803) >gi|1652461|dbj|BAA17383.1| (D90905) lactose transport system permease protein LacF [Synechocystis sp.] Length = 298 Score = 84.7 bits (206), Expect = 1e-15 Identities = 76/294 (25%), Positives = 134/294 (44%), Gaps = 29/294 (9%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHD------FVGTYNYYRLVHMFK 66 FL P ++M+ P + +SFT +Y D +VG N+ RL Sbjct: 19 FLLPALVMLGATVFYPALQAFSLSFT--------QYELDLTKAPAWVGLANFERLWRDRV 70 Query: 67 YDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSA-FRLLWLLPRMSPIAV 125 + TF+ +L + V + ++ L L LA + G FR+ + P ++ I V Sbjct: 71 FWLTFRHTLLYLVGVVPLLIM------LPLGLAILVNQKLRGITWFRMAYYTPVITSIVV 124 Query: 126 YSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIV 185 + W + +S G LN IL LG + IPW + WS+++ V G+ + M++ Sbjct: 125 AGIAWKALY--ASNGILNQILALLGF-SDGIPWLTSPNLALWSVMV-VTVWKGLGYYMVI 180 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 + + L IP+EL A +DGA W+ I PLM+ + V +S L + ++++ Sbjct: 181 YLAGLQAIPQELYEAGAIDGADGWRQHWDITIPLMRPYCFLVGVLSSISALKVFEEVYIM 240 Query: 246 VEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 + ++ T+ YV+ AF + + A+A ++L ++ I VI LK+ Sbjct: 241 TQGGPLNA--SKTVVYYVYERAF--QDLEMNYASAIGLVLFLVIFIFSVINLKL 290 >pir||G72379 sugar ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4980937|gb|AAD35516.1|AE001721_15 (AE001721) sugar ABC transporter, permease protein [Thermotoga maritima] Length = 286 Score = 84.7 bits (206), Expect = 1e-15 Identities = 81/297 (27%), Positives = 134/297 (44%), Gaps = 21/297 (7%) Query: 5 SRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM 64 S R+ F+ P ++ + LF +P+I + F WN+ FVG N+ L+ Sbjct: 4 SLVRSRFIFVLPGLVFLVLFVAVPVISVFIMGFF---KWNLLSPPR-FVGLENFKMLLK- 58 Query: 65 FKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIA 124 D F + +I + + + + LGLAL + R + P M P Sbjct: 59 ---DKWFWNSVWVSIKLLLLAVPMQFFVSLGLALC-LYEETTASKILRAFFYWPYMMPAV 114 Query: 125 VYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVN-GLVGVSFGM 183 + +W + IG LN IL LGL P+PW +SI + G+ G+ M Sbjct: 115 AGTTMWKWLL-SYDIGLLNHILRTLGL--PPVPWLIKPFPALFSIALLRTWGMTGLL--M 169 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 ++F + L +P++ + AA +DGA+ WQ ++FP M L VL L ++ ++ Sbjct: 170 VMFITGLQNVPQDYIEAAMIDGANRWQRFWYVVFPAMSNTNLLVLMTAIAHTLRSFAGVY 229 Query: 244 LLVEWDLVDRDYGTT-LALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 +L Y TT + LY++ TAF + G + AA+VI ++ +ITLK+ Sbjct: 230 VLTTG---GPGYATTIIPLYIYQTAFTQFR--IGYSYAASVIYFLIAFAIAMITLKL 281 >gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus solfataricus] Length = 297 Score = 83.9 bits (204), Expect = 2e-15 Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 13/287 (4%) Query: 12 FFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTF 71 F++ P++I+ ++ PL+ ++YISFT + + Y +VG NY ++ + Y F Sbjct: 15 FYILPIVIVTVFLFVFPLLYSVYISFTNLSLLHFLTY--SYVGLRNYL-IIFQYGY---F 68 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWY 131 ++ T+++ +L+ + G LAL K S F + +LP P + L+W Sbjct: 69 LELLKNTLIWTIGSLLTMMSLGFVLALILNQTDLKGRSIFYAILILPWAFPGFISILIWQ 128 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 + G +N ++ L L++ P AW +I N + + M VF SAL Sbjct: 129 GLWV-DPYGMMNRLI--LPLLHLPKVNSLTSTTDAWIELIATNDWLSFPYFMTVFYSALQ 185 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 IP+EL A +DGA+A+ I P +K +V F+ + +++L Sbjct: 186 SIPRELYDIADLDGANAFTKFLTITLPSLKRTIAFVFITSFVFTWNNFYPIYVLTGGG-- 243 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLK 298 T +Y + AF + LAAA ++I +I I+ G+I +K Sbjct: 244 PGISTETFIVYAYQEAF--SYNNFALAAAWSIISTIFVIVLGIIVIK 288 >pir||S63615 malF protein homolog cymF - Klebsiella oxytoca >gi|854233|emb|CAA60005.1| (X86014) cymF [Klebsiella oxytoca] Length = 427 Score = 83.9 bits (204), Expect = 2e-15 Identities = 68/258 (26%), Positives = 122/258 (46%), Gaps = 15/258 (5%) Query: 3 FDSRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERY-----LHDFVGTYN 57 +D+RF + L+P I F ++P+I+T+ +S T N++ + L D+VG N Sbjct: 123 YDNRFATI--MLAPAFIACIAFIIMPMIITVLVSLT---NYSAPHHIPPKNLVDWVGLKN 177 Query: 58 YYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLL 117 + L + + TF + + T+++ + G LALA A+R++++L Sbjct: 178 FITLFELRIWSKTFVGIGVWTVLWAFFATLCTCSFGFLLALALENKKIIAKKAWRVVFIL 237 Query: 118 PRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLV 177 P P V L++ +G IG +N+ L G+ + + P A +I V+ V Sbjct: 238 PYAIPAFVTLLIFRLLLNG--IGPVNSTLNSWGIDSIGF---LSDPLIAKMTVIAVSVWV 292 Query: 178 GVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLT 237 G + M++ T A+ IP++L A+ VDGAS +Q R I P++ L F Sbjct: 293 GAPYFMLLITGAMTNIPRDLYEASEVDGASKFQQFREITLPMVLHQVAPSLVMTFAHNFN 352 Query: 238 TYPHLFLLVEWDLVDRDY 255 + ++LL E ++ +Y Sbjct: 353 NFGAIYLLTEGGPINPEY 370 >pir||G70943 hypothetical protein Rv2040c - Mycobacterium tuberculosis (strain H37RV) >gi|2896777|emb|CAA17254.1| (AL021899) hypothetical protein Rv2040c [Mycobacterium tuberculosis] Length = 300 Score = 83.5 bits (203), Expect = 3e-15 Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 16/288 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P + V +F L PL ++Y+SF + W++ + FV N+ L F DP F Sbjct: 15 FVAPNLAAVVVFMLFPLGFSLYMSF---QKWDLFTHA-TFVRLDNFRNL---FTSDPLFL 67 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMSPIAVYSLVWY 131 ++ T V+ T++ V+ + L +A F + G S FR + LP V ++VW Sbjct: 68 IAVVNTAVYTVGTVVPTVI--VSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQ 125 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 + F+ + G LN +L LG+ PIPW W S+ + V+ V F +V +A+ Sbjct: 126 FVFNTDN-GLLNIMLGWLGI--GPIPWLIEPRWAMVSLCL-VSVWRSVPFATVVLLAAMQ 181 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 +P+ + AAR+DGA + I PL++ +V+ + + +++L + Sbjct: 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 L + +F AF E G A+A A ++ + ++ V+ L++ Sbjct: 242 PETATYVLGIMLFQHAFSFLE--FGYASALAWVMFAILLVLTVLQLRI 287 >dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4] Length = 282 Score = 83.1 bits (202), Expect = 4e-15 Identities = 75/296 (25%), Positives = 128/296 (42%), Gaps = 21/296 (7%) Query: 6 RFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMR--NWNVERYLHDFVGTYNYYRLVH 63 R +A FL+P ++ LF+ P++ + Y+SF R W +E L N+ RL+ Sbjct: 2 RTKAPYLFLAPYLVFFGLFWAWPIVYSFYLSFVNTRVYPWRLEPAL-------NWGRLLQ 54 Query: 64 MFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPI 123 DP F + T+ + + + + + L LALA + +R + P + Sbjct: 55 ----DPFFAVALKNTLFILAVQVPLMLALALLLALALNSALLRFKGFYRFAFFAPVVVGA 110 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 YS V+ F+ + G +NA+L LG + W P A ++II + Sbjct: 111 VAYSAVFRLLFN-TEFGAVNALLRALG--HPGYDW-LYAPGPAMAVIIVALTWRWTGYNA 166 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 I+ + L IPKEL AA +DGA WQ R + P ++ L+ L + L + F Sbjct: 167 IILLAGLQNIPKELYEAAAIDGAGPWQQFRHVTLPGIRPVLLFCLVLSIIGTLQLFTEPF 226 Query: 244 LLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 L+ + TL LY++ F + G A+ A +++L + L++ Sbjct: 227 LITGGG--PGNATMTLGLYLYQQGF--RSFNFGYASTIAYTVALLAAAFSFVQLRL 278 >emb|CAC11828.1| (AL445065) probable sugar ABC transporter, permease protein [Thermoplasma acidophilum] Length = 311 Score = 81.9 bits (199), Expect = 9e-15 Identities = 71/292 (24%), Positives = 143/292 (48%), Gaps = 23/292 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHD--FVGTYNYYRLVHMFKYDPT 70 F+ P++I V +F P I + IS ++ + + HD FVG NY ++ DP Sbjct: 34 FVIPLMIFVIVFTFFPAIYSFAISL-----FHYDPFFHDIHFVGFSNYLYVIR----DPA 84 Query: 71 FKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM-SPIAVYSLV 129 F ++ +++ + + + G AL F + K R + +P + SP+++ S++ Sbjct: 85 FIKSLINVLIYTAVVVTVQTFLAFGYALL-FNTASKISRVARAIVFIPAVVSPVSM-SII 142 Query: 130 WYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSA 189 + + F S+ G +N L G+ P W + + A+ I+ +N + MIV+++ Sbjct: 143 FIWVF--SNTGLVNYFLSFFGI--PPHNWLFSTVY-AFPAIMAMNIFTTAPYFMIVYSAG 197 Query: 190 LNQIPKELVIAARVDG-ASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 L IP+E++ AA++DG S + R + FPLM++ + V+ + + ++++ + Sbjct: 198 LQAIPQEVMDAAKIDGLKSGLRRFRYVYFPLMRFSTILVVILGLTGAMQLFDQIYVITDG 257 Query: 249 DLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 Y +Y++N F D GLAAAA+ +L ++ ++ + +V+ Sbjct: 258 GPARATY--VPLMYIYNRTFVY-VGDIGLAAAASFVLFVIILVLTITQRRVI 306 >emb|CAB71197.1| (AL138538) putative sugar transport system permease protein [Streptomyces coelicolor A3(2)] Length = 314 Score = 81.5 bits (198), Expect = 1e-14 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 15/207 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F+SP ++ A+F+ PL+ T+Y S + V + F G N+ ++F+ P F Sbjct: 20 FMSPWLVGFAVFFAYPLVSTVYFSLMKYDGFGVPQ----FRGLENW---AYVFQDYPLFW 72 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + T+ V + + V+ GLG+ L + G FR L+ LP ++P +L + + Sbjct: 73 PALRNTLWLVLVMVTCRVVFGLGVGLLITKIRTGAG-VFRTLFYLPYLAPPVAATLAFVF 131 Query: 133 FFHGSSIGTLNAILMRLGLINQPIP-WGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 + + G +N++L LG+ P P W + W ++ + GV M++F +AL Sbjct: 132 LLNPGT-GPVNSVLEGLGV---PAPGWFTDSAWSKPALTALA--VWGVGDLMVIFMAALL 185 Query: 192 QIPKELVIAARVDGASAWQISRRILFP 218 +PKE AA +DGASAWQ R + P Sbjct: 186 DVPKEQYEAAELDGASAWQRFRFVTLP 212 >sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE PROTEIN MSMF >gi|282318|pir||C42400 membrane protein MsmF - Streptococcus mutans >gi|153738|gb|AAA26935.1| (M77351) membrane protein [Streptococcus mutans] Length = 290 Score = 80.4 bits (195), Expect = 3e-14 Identities = 84/308 (27%), Positives = 133/308 (42%), Gaps = 40/308 (12%) Query: 5 SRFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM 64 +++ +F + P+I+ V FY P+ + SF NW Y DFVG NY L+ Sbjct: 8 NKYWGWTFLIVPLILQVVFFYF-PMFQGAFYSFI---NWTGLTYNFDFVGINNYKILMTD 63 Query: 65 FKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLL-PRMSPI 123 K+ +++T+ + ++ LG+ +A ++ G F W P + Sbjct: 64 GKFMKAIGFTLVSTLALIVGEIV------LGIIIARALNAKIKGKTFFRAWFFFPAVLSG 117 Query: 124 AVYSLVWYYFFH------GSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLV 177 SL++ F+ GS++G LG N GA IFV Sbjct: 118 LTVSLIFKQVFNYGLPAVGSALGIKFLETSMLGTAN-----------GAVIASIFVLLWQ 166 Query: 178 GVSFGMIVFTSALNQIPKELVIAARVDGASA----WQISRRILFPLMKWHFLYVLTWQFL 233 GV+ +I+F S L IP E+V AA +DGA + W + L P + F+ L Sbjct: 167 GVAMPIILFLSGLQSIPSEIVEAAAIDGADSKQTFWSVELPYLLPSISMVFIMALK---- 222 Query: 234 SLLTTYPHLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGG 293 + LT + +F L + T+L L V+N AF + G A A A+IL I+ I Sbjct: 223 AGLTAFDQIFALTGGG--PNNSTTSLGLLVYNYAFKSNQ--YGYANAIALILFIIIGIVS 278 Query: 294 VITLKVLK 301 V+ +K+ K Sbjct: 279 VLQIKLSK 286 >sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE PROTEIN AMYD >gi|481065|pir||S37704 amyD protein - Thermoanaerobacterium thermosulfurigenes >gi|565383|gb|AAB00843.1| (M57692) membrane protein for maltose transport [Thermoanaerobacterium thermosulfurigenes] >gi|228282|prf||1802282A sugar transport protein [Thermoanaerobacterium thermosulfurigenes] Length = 292 Score = 80.4 bits (195), Expect = 3e-14 Identities = 75/297 (25%), Positives = 140/297 (46%), Gaps = 37/297 (12%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWN-VERYLHDFVGTYNYYRLVHMFKYDPTF 71 F++P ++ + + LIP I+ IY SFT +WN + + + F+G N+ L ++ + Sbjct: 17 FIAPTLLSLIIVVLIPFIIGIYYSFT---DWNGINQPV--FIGLKNFMTLRDDAEF---W 68 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAF-RLLWLLPRMSPIAVYSLVW 130 ++I T V +IINV+G L+LA + F R + LP + + +W Sbjct: 69 NSIIFTAKFAVACIVIINVVG---LSLAMLVTRKIFARNFMRTAFYLPNLIGGLILGFIW 125 Query: 131 YYFFHGSSIGTLNAI--LMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTS 188 + F + I +G + W G W ++I + + + + M+++ + Sbjct: 126 NFIF----VDVFQTISDATHIGWLGG---WLSTTNTGFWGLVIVTSWQM-IGYVMVIYIA 177 Query: 189 ALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 + IP +L+ A+++DGA++WQ R ++FPL+ F +SL T + F L + Sbjct: 178 YIESIPTDLIEASKIDGANSWQQFRNVVFPLIAPAFT-------VSLFITLSNSFKLFDQ 230 Query: 249 DL---VDRDYGTT--LALYVFNTAFGRGEQDQGLAAAAA--VILSILGIIGGVITLK 298 +L TT + L ++ TAF E G A A +I++++ +I +T K Sbjct: 231 NLSLTAGAPGNTTQMITLNIYQTAFSAQEMAVGQAKAVIMFLIIAVISVIQVYLTQK 287 >sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE PROTEIN AGLF >gi|4210906|gb|AAD12049.1| (AF045609) AglF [Sinorhizobium meliloti] Length = 290 Score = 80.4 bits (195), Expect = 3e-14 Identities = 69/283 (24%), Positives = 134/283 (46%), Gaps = 36/283 (12%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 FL+P ++ + L+ + P++ ++++S G N FVG NY +++ D F+ Sbjct: 12 FLAPALLALTLYLVYPVVQSVWLSLHGRGGQN-------FVGLSNYSWMIN----DGEFR 60 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 I +++ + ++ GL +A T + G+ + L +P +++W + Sbjct: 61 QSIFNNFLWLLVVPALSTFFGLIIAALTDRIWW--GNIAKTLIFMPMAISFVGAAVIWKF 118 Query: 133 FFH-----GSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 + IG LNAI++ LG +P W W + +++ + + F M++ + Sbjct: 119 IYDYRAAGSEQIGLLNAIVVALG--GEPQAWITLPFWNNFFLMVILIW-IQTGFAMVILS 175 Query: 188 SALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE 247 +AL IP+E + AA +DGA+ WQI +I+ P + W ++++ T + +L Sbjct: 176 AALRGIPEETIEAAVIDGANGWQIFFKIMVPQI---------WGTIAVVWTTITILVLKV 226 Query: 248 WDLV-----DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVIL 285 +D+V + LA +F+ F RG D G AA AV++ Sbjct: 227 FDIVLAMTNGQWQSQVLANLMFDWMF-RGGGDFGRGAAIAVVI 268 >dbj|BAB04621.1| (AP001510) L-arabinose transport system (permease) [Bacillus halodurans] Length = 316 Score = 80.0 bits (194), Expect = 4e-14 Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 18/276 (6%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKA 73 +SP I+ + P + I +SF + V FVG +NY R+++ PTF Sbjct: 38 ISPFILSFIVLSFYPTVQAIVMSFQRVLPSEVT-----FVGLWNYSRILN-----PTFFT 87 Query: 74 VILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYF 133 + T ++ +T++I V + A+ K FR LP ++ + V +V+ Sbjct: 88 ALQNTTTYMILTVVILVSIPMLFAVLLNSKVVKFRILFRTALFLPALTSVIVAGMVFRLM 147 Query: 134 FHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQI 193 F S N IL +GL + + W N W +++ + + ++ F +AL + Sbjct: 148 FSESDTAVANQILNWIGL--ESVEWRYNA-WSGMFLMVVLASWRWMGINILYFLAALQNV 204 Query: 194 PKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDL-VD 252 PKEL AA +DGA+ Q + P +K ++V T + + F V W+ Sbjct: 205 PKELYEAADIDGANVVQKFFYVTLPFLKPVTIFVTTISVIGGFRMFEESF--VFWEAGSP 262 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSIL 288 + G T+ Y++ G + D G AA V+L ++ Sbjct: 263 GNIGLTIVGYLYQE--GIQQNDMGFGAAIGVVLMLI 296 >sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURN >gi|7442704|pir||E70018 sugar permease homolog yurN - Bacillus subtilis >gi|2635756|emb|CAB15249.1| (Z99120) similar to sugar permease [Bacillus subtilis] Length = 292 Score = 79.6 bits (193), Expect = 5e-14 Identities = 71/290 (24%), Positives = 131/290 (44%), Gaps = 15/290 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 FL P ++ + LF IP+ +++S +++ E+ F+G NY L H DP F Sbjct: 12 FLVPALVFL-LFVYIPIFENVFLSLFQWSSFSPEK---TFIGLKNYVELFH----DPVFY 63 Query: 73 AVILTTIVFVGITLIINVLGGLGLA-LATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWY 131 + +++ I+++ V GGL LA + + K FR ++ LP + + V +L+ + Sbjct: 64 QALTNNVLYAVISIVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALL-F 122 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 F + G LN +L +GL W + S+I FV+ V + +++ ++ Sbjct: 123 DFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSVI-FVSQWQSVGYIAMLYIVSIQ 181 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 +IP EL AAR+DGA Q I P K + T + ++L Sbjct: 182 KIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGG-- 239 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLK 301 L+ +++ +AF + G A+A A ++ I+ + ++ +K K Sbjct: 240 PGKASEVLSTFLYKSAFTK--DMMGYASAIATVVLIITLALSLMQMKFFK 287 >pir||F72292 glycerol-3-phosphate ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4981667|gb|AAD36197.1|AE001770_9 (AE001770) glycerol-3-phosphate ABC transporter, permease protein [Thermotoga maritima] Length = 302 Score = 79.6 bits (193), Expect = 5e-14 Identities = 77/299 (25%), Positives = 136/299 (44%), Gaps = 34/299 (11%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKA 73 L P +++ LF P + ++ +SF + + FVG N+ RL P + Sbjct: 24 LLPTFVIITLFIYWPAVYSLRLSFYRITPFGNRMV---FVGLRNFQRLFQ----SPEYLN 76 Query: 74 VILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSA-FRLLWLLPRMSPIAVYSLVWYY 132 I T+V+V +L + + L +A PG+ FR L P A+ ++W + Sbjct: 77 AIKVTVVYVLASLFLTIF--LAFFIALLLNMNLPGNRIFRALIFTPYAISPAIAGVLWSF 134 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 + +G +N IL +L + W P+ ++II + F +I + + L Sbjct: 135 LLN-PVVGHVNYILSKL--FGLQVEWLTTKPYALIAVIIATVWKT-LPFDIIFYLAGLQD 190 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 IP+EL+ A+ V+GA++W + +I+FPL+ Y++ +S F+ + ++D Sbjct: 191 IPQELIEASLVEGANSWARTWKIVFPLLSPITFYLVIMNLVS--------FMFSSFAIID 242 Query: 253 -------RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 +Y TTL ++ AF Q G AAA +VIL +I ++T+ KF E Sbjct: 243 VTTKGGPGNYTTTLIYRLYLDAF--AFQKIGPAAAQSVILF---LIMAIVTIFYFKFGE 296 >gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti] Length = 328 Score = 79.6 bits (193), Expect = 5e-14 Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%) Query: 6 RFRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM- 64 R R+ FL+P +++AL PLI TIY SFT N+ +FVG NY + + Sbjct: 27 RVRSAWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSG--AEFVGFANYLSWITLK 84 Query: 65 --------FKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAF-RLLW 115 DP + + T+ F L +++ LGL +A ++ PG R Sbjct: 85 SGRTIYRGLLADPAWWNAVWNTLKFT--VLSVSIETALGLIVALVLNAQFPGRGLVRAAI 142 Query: 116 LLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNG 175 L+P P V + +W + + G LN +L+ LGLI + I W + P A + V+ Sbjct: 143 LIPWAIPTIVSAKMWAWMLN-DQFGILNDMLIGLGLIGEKIAWTAS-PDTAMIAELIVDV 200 Query: 176 LVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSL 235 F ++ + L +P ++ AA++DG ++ R+ PL++ + + ++ L Sbjct: 201 WKTTPFMALLILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRMLDA 260 Query: 236 LTTYPHLFLL 245 L + +++L Sbjct: 261 LRIFDLIYVL 270 >pir||H70033 maltodextrin transport system permease homolog yvdH - Bacillus subtilis >gi|1945667|emb|CAB08037.1| (Z94043) hypothetical protein [Bacillus subtilis] >gi|2635973|emb|CAB15465.1| (Z99121) similar to maltodextrin transport system permease [Bacillus subtilis] Length = 435 Score = 78.8 bits (191), Expect = 8e-14 Identities = 70/293 (23%), Positives = 131/293 (43%), Gaps = 17/293 (5%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVE-RYLHDFVGTYNYYRLVHMFKYDPTF 71 F P IM+ + P+++T++++ T +++ L D+VG N+ + + Y TF Sbjct: 132 FTLPAYIMMVFVIIFPVLVTLFVALTNYDFYHIPPNRLIDWVGFKNFLNIFFLGSYRETF 191 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSE--KPGSAFRLLWLLPRMSPIAVYSLV 129 V+ T+++ + ++ LG+ A F + K FR+++L P P + + Sbjct: 192 VNVLGWTVIWTICATTLQII--LGIVTALFVNQDFIKGKRIFRMIFLFPWAVPAFITIMS 249 Query: 130 WYYFFHGSSIGTLNA----ILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIV 185 + F+ SIG +NA + L + P + P+ + +I + +G + ++ Sbjct: 250 FSNMFN-DSIGAVNAQVIPLFNHLPFVELPAIAWKTDPFWTKTALIMIQTWLGFPYIYVM 308 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 T L IP EL AA++DGA+ Q R I FP++ + V+ Q+ + ++L Sbjct: 309 VTGVLQAIPGELYEAAKIDGATFIQRFRHITFPMILFATAPVMITQYTFNFNNFSIIYLF 368 Query: 246 VEWDLVDRDYGT----TLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGV 294 E G L +++ G Q + AAAV L I I+ G+ Sbjct: 369 NEGGPGSAGAGAGSTDILISWIYKLTTGTSPQ---YSVAAAVTLLISFIVIGI 418 >dbj|BAB04837.1| (AP001511) lactose transport system (permease) [Bacillus halodurans] Length = 318 Score = 78.8 bits (191), Expect = 8e-14 Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 41/292 (14%) Query: 14 LSPMIIMVALFYLIPLILTIYISFT-----GMRNWNVERYLHDFVGTYNYYRLVHMFKYD 68 +SP ++ + P+I ++Y SFT NW VG NY +H+F D Sbjct: 36 ISPWLLGFFGLVIGPMIASLYFSFTDYDMLSSANW---------VGLQNY---IHIFTSD 83 Query: 69 PTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM--SPIAVY 126 P F + T++FV + + + L LA+ F K F ++ +P + +AV Sbjct: 84 PRFVQSLKVTLIFVFVPTPLKLAFALFLAML-FNTGRKGSGLFSTIYYIPSIIGGSVAV- 141 Query: 127 SLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFG--MI 184 ++VW F S G +N+ L G + W + + A SI+I LV FG MI Sbjct: 142 AVVWKQLF--GSRGAVNSFLELFGFSG--VNWIGSTDY-ALSILIL---LVVWQFGSPMI 193 Query: 185 VFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFL 244 +F + L QIP+EL AA VDGA++++ I P++ + L Q + T+ +L Sbjct: 194 IFLAGLRQIPQELYEAASVDGANSFRKFFSITLPMLTPVIFFNLIMQTIGGFMTFTQAYL 253 Query: 245 LVEWDLVDRDYGTTL--ALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGV 294 + +D +TL A+Y++ AF G A+A A IL L IIGG+ Sbjct: 254 ITGGGPLD----STLFYAVYLYEVAF--EYLRMGYASAMAWIL--LVIIGGI 297 >sp|P26467|MALF_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF >gi|96792|pir||S20604 inner membrane protein malF - Salmonella typhimurium >gi|47774|emb|CAA38190.1| (X54292) malF [Salmonella typhimurium] Length = 514 Score = 78.0 bits (189), Expect = 1e-13 Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 14/280 (5%) Query: 34 YISFTGMRNWNVERYLHDF---VGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINV 90 Y S G +W E+ + +G N+ R+ F A+ + T+VF +T+++ V Sbjct: 237 YQSINGDGSWGDEKLSPGYTVTIGAKNFTRVFTDEGSQKPFFAIFVWTVVFSVLTVVLTV 296 Query: 91 LGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLG 150 G+ LA + + K + +R+L +LP P + L++ F+ S G +N +L L Sbjct: 297 AVGMVLACLVQWEALKGKAIYRVLLILPYAVPSFISILIFKGLFN-QSFGEINMMLSALF 355 Query: 151 LINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQ 210 I P + P A +++I VN +G + MI+ L IP +L A+ +DGA +Q Sbjct: 356 GIK---PAWFSDPNTARAMVIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQ 412 Query: 211 ISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE------WDLVDRDYGTTLALYVF 264 +I PL+ ++ F + + LL Y L Y + Sbjct: 413 NFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTY 472 Query: 265 NTAF-GRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 AF G G QD GLAAA A ++ +L ++ LK + + Sbjct: 473 RIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMK 512 >pir||T35671 probable transmembrane transport protein - Streptomyces coelicolor >gi|2661678|emb|CAA15783.1| (AL009199) probable transmembrane transport protein [Streptomyces coelicolor A3(2)] Length = 353 Score = 78.0 bits (189), Expect = 1e-13 Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 20/303 (6%) Query: 7 FRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFK 66 F ++FFL+ + + +A+F + LI F GM +W ++FVG N+ + MF+ Sbjct: 31 FDRVTFFLAFLGVPLAIFVIFVLIPFGQAIFWGMTDWRGFSPDYNFVGFDNFTK---MFQ 87 Query: 67 YDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG--------SAFRLLWLLP 118 D KA+ ++ + L+ L LG+A+A G S +R++ P Sbjct: 88 DDIFLKALRNVALLAAFVPLVTLTL-ALGVAVAITLGGPSKGPVRGIRGASFYRIISFFP 146 Query: 119 RMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLIN-QPIPW-GQNVPWGAWSIIIFVNGL 176 + P + L+W + ++ G LN +L LGL W G+ + + V GL Sbjct: 147 YVVPAIIVGLIWAQMYDPNA-GLLNGVLTGLGLDQFDTFAWLGEKAAAMPAVMFVIVWGL 205 Query: 177 VGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLL 236 VG F ++F +A+ +P EL AA++DGA ++ + I P ++ + ++ L Sbjct: 206 VG--FYAVLFIAAIKGVPGELYEAAKIDGAGRFRTTISITLPAIRDSVQTAYIYLGIAAL 263 Query: 237 TTYPHLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVIT 296 + ++ +V D T++ +FN AF + Q G A A V+L+ + ++ + Sbjct: 264 DAFVYVQAMVPNGGPDNS-TLTISQRLFNVAFAK--QQFGYATAMGVVLAAVTLVFAALV 320 Query: 297 LKV 299 V Sbjct: 321 FLV 323 >emb|CAB55533.1| (AL117322) putative binding-protein-dependent transport protein [Streptomyces coelicolor A3(2)] Length = 317 Score = 78.0 bits (189), Expect = 1e-13 Identities = 74/288 (25%), Positives = 124/288 (42%), Gaps = 19/288 (6%) Query: 8 RALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKY 67 +A FL+P ++ ALFY P + IY S T DFVG NY RL+ Sbjct: 35 KAAWLFLAPALLGFALFYAYPTVRGIYYSLTDYSLIATP----DFVGGDNYSRLIG---- 86 Query: 68 DPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYS 127 D F + T +V + ++ L L L LAT A R + L+P + P Sbjct: 87 DEQFWNALQVTGYYVLVNIVSQTL--LALVLATLMHRLTRSVALRAMLLVPWLVPNVTVG 144 Query: 128 LVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 L+W + +++G +N +L +G+ P A + VN + ++ Sbjct: 145 LLWMWLLD-TNLGLVNHVLNSMGMGTTGF---FTSPDWAMPSVAAVNTWAYTGYTALLLY 200 Query: 188 SALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE 247 + + Q+P+ L +A +DGA W++ RI PL++ VL + + + + + Sbjct: 201 AGMLQVPQYLYESASLDGAGEWRMFTRITLPLLRPVLSLVLVVSLIGSFQIFDTIAVTTK 260 Query: 248 WDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILS-ILGIIGGV 294 V + Y++ AF G A+A AV+L+ ILG++ V Sbjct: 261 GGPVSAT--RVIYYYIYEQAFTNFH--MGYASAVAVVLALILGVLTAV 304 >sp|P02916|MALF_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF >gi|72500|pir||MMECMF maltose transport inner membrane protein malF - Escherichia coli >gi|396368|gb|AAC43127.1| (U00006) maltose transport inner membrane protein [Escherichia coli] >gi|455175|gb|AAB59055.1| (J01648) cytoplasmic maltose-binding protein [Escherichia coli] >gi|1790465|gb|AAC77003.1| (AE000476) part of maltose permease, periplasmic [Escherichia coli K12] Length = 514 Score = 77.3 bits (187), Expect = 2e-13 Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 14/280 (5%) Query: 34 YISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYD---PTFKAVILTTIVFVGITLIINV 90 Y S T NW E+ + T + +F + F A+ + T+VF IT+ + V Sbjct: 237 YQSITADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTV 296 Query: 91 LGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLG 150 G+ LA + + + + +R+L +LP P + L++ F+ S G +N +L L Sbjct: 297 AVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFN-QSFGEINMMLSALF 355 Query: 151 LINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQ 210 + P + P A +++I VN +G + MI+ L IP +L A+ +DGA +Q Sbjct: 356 GVK---PAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQ 412 Query: 211 ISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE------WDLVDRDYGTTLALYVF 264 +I PL+ ++ F + + LL Y L Y + Sbjct: 413 NFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTY 472 Query: 265 NTAF-GRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 AF G G QD GLAAA A ++ +L ++ LK + + Sbjct: 473 RIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMK 512 >sp|P18812|MALF_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF >gi|78245|pir||S05332 inner membrane protein malF - Enterobacter aerogenes Length = 514 Score = 77.3 bits (187), Expect = 2e-13 Identities = 74/280 (26%), Positives = 124/280 (43%), Gaps = 14/280 (5%) Query: 34 YISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYD---PTFKAVILTTIVFVGITLIINV 90 Y S +W E+ + T + +F+ + F A+ + T+VF +T+I+ V Sbjct: 237 YQSINADGSWGNEKLSPGYTVTIGWDNFTRVFQDEGIQKPFFAIFVWTVVFSVLTVILTV 296 Query: 91 LGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLG 150 G+ LA + + K + +R+L +LP P + L++ F+ S G +N +L L Sbjct: 297 AVGMVLACLVQWEALKGKAIYRVLLILPYAVPSFISILIFKGLFN-QSFGEINMMLSALF 355 Query: 151 LINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQ 210 I P + P A ++II VN +G + MI+ L IP +L A+ +DGA +Q Sbjct: 356 GIK---PAWFSDPTTARTMIIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQ 412 Query: 211 ISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVE------WDLVDRDYGTTLALYVF 264 +I PL+ ++ F + + LL Y L Y + Sbjct: 413 NFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTY 472 Query: 265 NTAF-GRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 AF G G QD GLAAA A ++ +L ++ LK + + Sbjct: 473 RIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMK 512 >sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJO >gi|7442722|pir||B64880 probable multiple sugar transport protein b1311 precursor - Escherichia coli >gi|1742149|dbj|BAA14887.1| (D90769) Sn-glycerol-3-phosphate transport system permease protein UgpA. [Escherichia coli] >gi|1787570|gb|AAC74393.1| (AE000229) putative binding-protein dependent transport protein [Escherichia coli K12] Length = 293 Score = 76.9 bits (186), Expect = 3e-13 Identities = 80/286 (27%), Positives = 134/286 (45%), Gaps = 23/286 (8%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMR-NWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 L+P ++++ P++ I ISF + N N+E FVG NY R++ DP F Sbjct: 18 LAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIES---TFVGVSNYVRILS----DPGFW 70 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSE-KPGSAFRLLWLLPRMSPIAVYSLVWY 131 + T+ + + + + + LGLA+A FF E + R L +L ++P W Sbjct: 71 HSLWMTVWYTALVVAGSTV--LGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWK 128 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 Y F+ + G +N + + L + + P + P ++ +++ + I F + L Sbjct: 129 YMFN-NGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQ 187 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 I K L AA +DGA+AWQ R + P + V+T + + + + ++LL V Sbjct: 188 TIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT--TKV 245 Query: 252 DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITL 297 D L +Y++ TAF D G AAA +V+L I II VI L Sbjct: 246 D-----ILGVYLYKTAF--AFNDLGKAAAISVVLFI--IIFAVILL 282 >pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307|gb|AAC00385.1| (AF008220) sugar transporter [Bacillus subtilis] >gi|2635512|emb|CAB15006.1| (Z99119) amyD [Bacillus subtilis] Length = 303 Score = 76.9 bits (186), Expect = 3e-13 Identities = 75/290 (25%), Positives = 125/290 (42%), Gaps = 18/290 (6%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKAVI 75 P ++ V +F + P + I+FT NWN ++ +VG Y RL DP ++ Sbjct: 27 PALLSVLVFMIYPFVKGTLITFT---NWNGFSQVYQWVGFAQYERLFS----DPDTWHIL 79 Query: 76 LTTIVF-VGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFF 134 T+ + +G T NV+G L L S K + R + LP M + +WY+FF Sbjct: 80 KNTLHYGLGSTFFQNVVGLLYALLLN--QSIKTKAVTRTIVYLPVMISPLIMGYIWYFFF 137 Query: 135 HGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIP 194 G LN +L G+ PI + W II+ +N V M+V+ + L IP Sbjct: 138 SYDG-GALNDLLGVFGI--SPINALASPSLNPW-IIVMINTYQYVGIAMVVYLAGLQSIP 193 Query: 195 KELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVDRD 254 K+ AA++DGA Q I PL+ + + L + + L + Sbjct: 194 KDYYEAAQMDGAKQGQQFFTITLPLLMPSITINIVINIIGGLKLFDVIIALTAGG--PGN 251 Query: 255 YGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 +++ ++++ F R QD G AA + ++ + +I L K +E Sbjct: 252 ASQSMSTFMYDLYFKR--QDAGYAATQGIFMAFVILIISFCALAYFKRKE 299 >emb|CAB95283.1| (AL359779) putative sugar transport integral membrane protein [Streptomyces coelicolor A3(2)] Length = 311 Score = 76.5 bits (185), Expect = 4e-13 Identities = 68/298 (22%), Positives = 140/298 (46%), Gaps = 23/298 (7%) Query: 7 FRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFK 66 F A F++P ++ A F L PL+ + +SFT + +F+G NY L+ Sbjct: 30 FLAPYLFVAPFYVVFAAFGLYPLVFALQLSFTDWKGAGEA----NFIGLENYTYLLT--- 82 Query: 67 YDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVY 126 F + + + V + + + ++GGL A+ + FR+ ++ P ++P+ Sbjct: 83 -SEEFWSSLGNSAVMWLLIVPLQIVGGLAAAVLLANAKLRLRGMFRVAFIAPFVTPLVAM 141 Query: 127 SLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSI-IIFVNGLVGVSFGMIV 185 + VW F + G +N + +GL + + W Q+ W ++ ++F+ G F +I+ Sbjct: 142 AQVWIVAFD-TDYGLVNHLFNFVGLPD--VDWLQSTVWAKPTLALLFLWKTTG--FAIII 196 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 + L +P ++ AA +DGAS + + PL++ +++ Q L++ + F++ Sbjct: 197 LLAGLQAVPGDVYEAAALDGASRKRQFWSLTLPLVRRSIAFLVVVQTLAVFQMFAEPFVV 256 Query: 246 VEWDLVDRDYG--TTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLK 301 + YG TT LY++N D G AA + +L +L ++++++L+ Sbjct: 257 TQ----GGPYGSTTTGGLYLYNHILA---SDLGTGAANSFLLVLLVFALSLLSVRLLR 307 >gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner membrane protein; SmoF [Rhodobacter sphaeroides] Length = 290 Score = 76.1 bits (184), Expect = 5e-13 Identities = 75/295 (25%), Positives = 126/295 (42%), Gaps = 22/295 (7%) Query: 9 ALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYD 68 A +SP +I++ L+ ++PL +T+Y SF +R + + F G NYY F D Sbjct: 9 AARLMISPAVILLFLWMIVPLSMTLYFSF--LRYNLLMPGMESFTGWDNYY----YFLTD 62 Query: 69 PTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKP---GSAFRLLWLLPRMSPIAV 125 P F A + TI+ V L+I V+GG+ LAL + ++P R+L + P V Sbjct: 63 PAFSAALTNTILLVVGVLLITVVGGVLLAL----LLDQPFWGQGIVRVLVIAPFFVMPTV 118 Query: 126 YSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIV 185 +LVW F G I LGL P + P + II + + F ++ Sbjct: 119 SALVWKNMFMNPVNGMFAHIARGLGL--PPFDFLSQAPLAS---IIGIVAWQWLPFATLI 173 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 +AL + +E + AA +DGASA I P + V+ Q + LL + + + Sbjct: 174 LLTALQSLDREQMEAAEMDGASALDRFIHITVPHLTRAITVVVLIQTIFLLGVFAEILVT 233 Query: 246 VEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 T +Y + D G +A ++ +L I + ++++ Sbjct: 234 TNGGPGTASTNITYLVYAQSLL----NYDVGGGSAGGIVAVVLANIVAIFLMRMI 284 >gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane protein [Thermus brockianus] Length = 280 Score = 76.1 bits (184), Expect = 5e-13 Identities = 77/291 (26%), Positives = 131/291 (44%), Gaps = 26/291 (8%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMR--NWNVERYLHDFVGTYNYYRLVHMFKYDPT 70 FL+P ++ A+F+ P+ ++Y+SF R W +E VG N+ RL+ DP Sbjct: 8 FLTPYALLFAVFWAWPIAYSLYLSFLNTRVYPWRLE------VGV-NWGRLLQ----DPF 56 Query: 71 FKAVILTT--IVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSL 128 F + T I+ V + L++ L L LAL + + K FR + P + YS Sbjct: 57 FWTALKNTLFILLVQVPLML-ALALLALALNSALLRAK--GFFRFAFFAPVVVGAVAYSA 113 Query: 129 VWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTS 188 V+ F+ + G +NA+L LG + W P A ++II + I+ + Sbjct: 114 VFRLLFN-TEFGAVNALLRTLG--HPGYDW-LYAPGPAMAVIIIALTWRWTGYNAIILLA 169 Query: 189 ALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 L IPKEL AA +DGA WQ + P ++ L+ L + L + FL+ Sbjct: 170 GLQSIPKELYEAAALDGAGPWQRFWHVTLPGIRPVLLFALILSIIGTLQLFTEPFLITGG 229 Query: 249 DLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 + TL +Y++ F + G A+A A +++L + + +++ Sbjct: 230 G--PGNATMTLGVYLYQQGF--RSFNFGYASAIAYTVALLAALFSFLQMRL 276 >emb|CAB61807.1| (AL133236) putative integral membrane transport protein [Streptomyces coelicolor A3(2)] Length = 315 Score = 76.1 bits (184), Expect = 5e-13 Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 21/286 (7%) Query: 8 RALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKY 67 + ++ L+P I ++ PL + S +R+ + +F+G NY + Sbjct: 33 KTMAAMLAPSIFLLIALNAYPLFYAVSQS---LRDGGIAGP-GEFIGLENYTTALQ---- 84 Query: 68 DPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMSPIAVY 126 DP F + T++F +++ + + +G ALA PG S FR+L LLP + P+ V Sbjct: 85 DPAFWEAVRFTLLFTVVSVFVAWV--IGTALALVLRRSFPGRSVFRVLLLLPWVVPVVVS 142 Query: 127 SLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVF 186 + W + S + +L LG + I P A +I+I V F M++ Sbjct: 143 TTSWNFLVATPS-SPVPTLLRELGFGDVQILAN---PGSAMAIVIIFKIWGTVPFMMMMM 198 Query: 187 TSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLT--TYPHLFL 244 +SAL + + A R+DGAS WQ R ++ P+M + W S+ T +P +FL Sbjct: 199 SSALQAVDPSVEEACRLDGASRWQRIRHVILPIMSKP--VYIAWVLASIFTINDFPSVFL 256 Query: 245 LVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGI 290 L V +TL ++ + F G+A A + +++ + Sbjct: 257 LTGGGPVGST--STLVVFAYRLVFQDFRTGYGVAVAFLITTALIAM 300 >pir||E70703 probable uspA protein - Mycobacterium tuberculosis (strain H37RV) >gi|1524284|emb|CAB02051.1| (Z79702) uspA [Mycobacterium tuberculosis] Length = 290 Score = 75.3 bits (182), Expect = 9e-13 Identities = 79/305 (25%), Positives = 142/305 (45%), Gaps = 30/305 (9%) Query: 6 RFRALSF-FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHM 64 R AL++ L+P ++ V F L+P+++ +++S + W++ L +VG N+ ++ Sbjct: 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLS---LHRWDLLGPLR-YVGLTNWRSVLT- 61 Query: 65 FKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSA-FRLLWLLPRMSPI 123 D F ++ T VFV I + + LGL A+ PG+ FR L++LP + Sbjct: 62 ---DSGFADSLVVTAVFVAIVVPAQTV--LGLLAASLLARRLPGTGLFRTLYVLPWICAP 116 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 +++W + + G ++ +L I W + P A ++ V V + Sbjct: 117 LAIAVMWRWIVAPTD-GAISTVL------GHRIEWLTD-PGLALPVVSAVVVWTNVGYVS 168 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 + F + L IP+++ AAR DGASAWQ RI P+++ +VL +S + ++ Sbjct: 169 LFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVY 228 Query: 244 LLVEWDLVDRDYGTT--LALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLK 301 L G+T +A ++ AFG G A+ AV+L + I+ G ++ L Sbjct: 229 ALTG----GGPQGSTDLVAHRIYAEAFGAAA--IGRASVMAVVLFV--ILVGATVVQHLY 280 Query: 302 FEEMI 306 F I Sbjct: 281 FRRRI 285 >emb|CAB86098.1| (AL163003) putative sugar transporter inner membrane protein [Streptomyces coelicolor A3(2)] Length = 313 Score = 75.3 bits (182), Expect = 9e-13 Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 20/283 (7%) Query: 7 FRALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYR-LVHMF 65 F+ +F++P + + ALF + PL+ +Y+SFT N+ +F+G NY L Sbjct: 30 FQHGGWFVAPFLALFALFVVWPLLRGLYLSFTDA---NISGDSANFIGLDNYREALKDPL 86 Query: 66 KYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAV 125 +D + T +V IT++ +L L + E+ +RL + LP + P V Sbjct: 87 MWDALGHSAYFTLLVVPCITVLALLLAMLAHHI------ERGKWLWRLCFFLPFLLPSTV 140 Query: 126 YSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIV 185 + +W + F+ + G +N + GL PW + + +++I V F ++ Sbjct: 141 AANLWQWLFNPGT-GMVNHVF---GL---ETPWLTDKSYAMLAVVITTLWWT-VGFSFLL 192 Query: 186 FTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLL 245 + +AL IP L AA++DGA+AW I P+++ V+ Q L+ L + ++ Sbjct: 193 YLAALQGIPAHLYEAAKLDGANAWHRILHITLPMLRNITGLVVALQILASLQVFDQAVVI 252 Query: 246 VEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSIL 288 ++ D T Y F G A+A ++I +L Sbjct: 253 QDFGPGPEDSTRTFVQYTLEQGF--TSYRVGYASAISIIFFVL 293 >sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1038 >gi|7442711|pir||B71097 hypothetical protein PH1038 - Pyrococcus horikoshii >gi|3257453|dbj|BAA30136.1| (AP000004) 291aa long hypothetical protein [Pyrococcus horikoshii] Length = 291 Score = 74.9 bits (181), Expect = 1e-12 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 23/220 (10%) Query: 12 FFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHD-FVGTYNYYR------LVHM 64 FFL P + ++ F + P+ TIY+SF +L D FVG NY +V++ Sbjct: 9 FFLLPALTLMVPFVIYPVFKTIYLSF----------FLGDKFVGLENYKNVLLSPDIVNL 58 Query: 65 FKY---DPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMS 121 ++ P + A+I IV++ I L + GLG AL K S + + L + Sbjct: 59 ERFPTKSPPWGALI-HNIVWIAIHLPTTIFLGLGFALLLRKKEVKGSSIIKSIIFLGMVI 117 Query: 122 PIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSF 181 P+ V L+ + F + G + A +G+ I W P A +I + + F Sbjct: 118 PMVVGGLIIRFLFEEGA-GVIPAFFKLIGIEKLAITWTA-YPQTALFSVILGSIWIWTGF 175 Query: 182 GMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMK 221 M+++++ L IPK+ AA +DGA+ +QI R +++PL++ Sbjct: 176 SMLMYSAGLASIPKDYYEAALIDGANKFQIFRFVIWPLLR 215 >gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Thermobifida fusca] Length = 302 Score = 74.9 bits (181), Expect = 1e-12 Identities = 78/293 (26%), Positives = 142/293 (47%), Gaps = 22/293 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F++P I+ A+F L PL+ T+++S + +W + F +Y RLV K+ + Sbjct: 23 FIAPFFILFAIFGLFPLLYTVWVS---LHDWTLLGGNQGFNWFAHYTRLVQDAKF---WN 76 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 ++ T +FV + ++ +L + LA T + + FR+ LLP ++ IA ++V+ Sbjct: 77 SLYNTFGIFV-VAVVPQLLLAMYLA-DTLSRRIRAVNFFRMGLLLPYLTSIAAVAIVFSQ 134 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F G+ G +N +L G+ PI W Q + +W I + + +++ +A++ Sbjct: 135 LF-GTQFGLINYVLGFFGI--DPINW-QAGRFSSWVAIAVMIDWRWTGYNALIYLAAMSA 190 Query: 193 IPKELVIAARVDGASA----WQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 IP+E+ AA +DGAS WQI+ +L P + F +++ L T P +F V Sbjct: 191 IPREIYEAAAIDGASRMRQFWQITIPMLRPTI--IFTVIVSTIGQMQLFTEPVIFGDVAG 248 Query: 249 DLVDRDYGTTLALYVFNTAFGRGEQDQGLAAA--AAVILSILGIIGGVITLKV 299 + TT+ L +F AF G A A +I+ +L + ++T K+ Sbjct: 249 G-TQGQFQTTMML-IFEEAFRFNNYGYGSAIAWTLFMIIVVLSALNALLTSKI 299 >gb|AAF70321.1|AF260245_1 (AF260245) MalF [Vibrio cholerae] Length = 283 Score = 74.9 bits (181), Expect = 1e-12 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 14/260 (5%) Query: 53 VGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFR 112 +GT+N+ R+ F + + T++F +T+I ++ GL LA + + K + +R Sbjct: 28 IGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYR 87 Query: 113 LLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIF 172 +L +LP P + L++ F+ S G +N +L GL W + P A ++++ Sbjct: 88 VLLILPYAVPAFISILIFRGLFN-QSFGEINMVLN--GLFGLSPAWFSD-PLLAKTMVLI 143 Query: 173 VNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQF 232 VN +G + MI L IP +L A+ +DGA+ +I P+M +L F Sbjct: 144 VNTWLGFPYMMIFCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASF 203 Query: 233 LSLLTTYPHLFLLVEWD------LVDRDYGTTLALYVFNTAF-GRGEQDQGLAAAAAVIL 285 + + LL + Y L Y + AF G G QD GLA+A A ++ Sbjct: 204 AFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLI 263 Query: 286 SILGIIGGVITLKVLKFEEM 305 +L G + L L+F ++ Sbjct: 264 FLL---VGALALLNLRFTKL 280 >pir||G82397 maltose ABC transporter, permease protein VCA0944 [imported] - Vibrio cholerae (group O1 strain N16961) >gi|9658381|gb|AAF96840.1| (AE004421) maltose ABC transporter, permease protein [Vibrio cholerae] Length = 524 Score = 74.9 bits (181), Expect = 1e-12 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 14/260 (5%) Query: 53 VGTYNYYRLVHMFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFR 112 +GT+N+ R+ F + + T++F +T+I ++ GL LA + + K + +R Sbjct: 269 IGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYR 328 Query: 113 LLWLLPRMSPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIF 172 +L +LP P + L++ F+ S G +N +L GL W + P A ++++ Sbjct: 329 VLLILPYAVPAFISILIFRGLFN-QSFGEINMVLN--GLFGLSPAWFSD-PLLAKTMVLI 384 Query: 173 VNGLVGVSFGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQF 232 VN +G + MI L IP +L A+ +DGA+ +I P+M +L F Sbjct: 385 VNTWLGFPYMMIFCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASF 444 Query: 233 LSLLTTYPHLFLLVEWD------LVDRDYGTTLALYVFNTAF-GRGEQDQGLAAAAAVIL 285 + + LL + Y L Y + AF G G QD GLA+A A ++ Sbjct: 445 AFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLI 504 Query: 286 SILGIIGGVITLKVLKFEEM 305 +L G + L L+F ++ Sbjct: 505 FLL---VGALALLNLRFTKL 521 >emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyces coelicolor A3(2)] Length = 334 Score = 74.1 bits (179), Expect = 2e-12 Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 19/287 (6%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYL--------HDFVGTYNYYRLVHMF 65 ++P+ +++ + L PL +Y++ T + N R + + FVG NY ++ Sbjct: 40 IAPVAVVIGVLVLYPLGYGLYLTLTDANSLNSARTIGVNEIEATYKFVGLDNYADILWGP 99 Query: 66 KYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAV 125 F + + TIV+ + + ++ GLGLAL + + +RL+ +LP P V Sbjct: 100 TAYDRFWSHFIWTIVWTAVCVGLHFFIGLGLALL-LNQKLRGRTFYRLILVLPWAVPTFV 158 Query: 126 YSLVWYYFFHGSSIGTLNAILMRLGLINQPIP-WGQNVPWGAWSIIIFVNGLVGVSFGMI 184 W + + G +N+ L L L P P W ++ W +S I+ VN GV F M+ Sbjct: 159 TVFGWRFML--ADQGIINSALDWLHL---PTPAWLEDTFWQRFSAIM-VNTWCGVPFMMV 212 Query: 185 VFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFL 244 L I L A+ +DGA+AWQ R + P ++ V+ + + +FL Sbjct: 213 SLLGGLQSIDNSLYEASEMDGANAWQRFRYVTLPGLRSVSSTVVLLGIIWTFNQFAVIFL 272 Query: 245 LVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGII 291 L D L + + FG+ +D +AA ++L + I+ Sbjct: 273 LFGNTAPD---AQILVTWAYQLGFGQQPRDFAQSAAYGILLLAILIV 316 >dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bacillus halodurans] Length = 293 Score = 74.1 bits (179), Expect = 2e-12 Identities = 64/288 (22%), Positives = 135/288 (46%), Gaps = 29/288 (10%) Query: 8 RALSFFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLV--HMF 65 + ++ ++ P ++++ + IP++LT Y G+ +W+ + F+G NY L+ MF Sbjct: 9 KVIALYVLPALLLILVLIYIPIVLTGYY---GLMDWDGIGPM-TFIGLENYANLLVDKMF 64 Query: 66 ---KYDPTFKAV--ILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRM 120 Y A+ +L+ ++++ I+L++ G + K FR ++L+P + Sbjct: 65 WSSAYHSLLLAIFSVLSLVIYLAISLVLT--GNI-----------KGADLFRKIFLIPML 111 Query: 121 SPIAVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVS 180 + +W +H ++ G N L LG+ N P+ W + ++I I + Sbjct: 112 LSSVAIAQLWMRIYHPTN-GVFNRFLTSLGIENPPL-WLSDTNIVLFAIFIPILWQYA-G 168 Query: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 F ++++ +AL +P ELV AA++DGA+ QI+ ++ PL+ + + L + Sbjct: 169 FYILIYYAALRNVPNELVEAAQIDGATPLQIAYKVKLPLIAGVIKVTVVLAVIGSLKYFD 228 Query: 241 HLFLLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSIL 288 ++++ D +A Y++ AF + G A +++ IL Sbjct: 229 LIYVMT--DGGPNGASEVMASYMYKLAFRTNDFGYGSAIGFFLLILIL 274 >emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/maltose (malF) related protein [Thermoplasma acidophilum] Length = 304 Score = 74.1 bits (179), Expect = 2e-12 Identities = 81/301 (26%), Positives = 133/301 (43%), Gaps = 28/301 (9%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 ++ P+I ++ P+ + IY SFT + V Y + F+G NY +V F Sbjct: 24 YVLPVIAVLIFLDFYPIGVGIYFSFTNLNV--VHFYDYSFIGLANYVSIVT----SSAFL 77 Query: 73 AVILTTIVF-VGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVW- 130 +IL TI++ VG T ++ V G LAL +R L L P P + L+W Sbjct: 78 QIILHTIIWSVGSTALM-VPMGFALALVINQKGLIGKRFYRTLILFPWAYPAFITLLIWK 136 Query: 131 ----YYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVF 186 Y+F G +N +L +G+ + + W P A +I VN + + VF Sbjct: 137 NMLSYHF------GIINEVLNAIGI--KGLFW-LGSPSLAMLSLILVNLWLSFPYYTYVF 187 Query: 187 TSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLV 246 T+++ IP EL AA +DG + RRI P++ F ++ + F+ + +FLL Sbjct: 188 TASIQSIPSELYDAAEMDGYGTLRTLRRITIPMLSRQFAFITIFGFIFTWNNFYPVFLLT 247 Query: 247 -EWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEM 305 L+ L Y + AF G+A A IL +L ++ V+ K K ++ Sbjct: 248 GGGPLISTQ---ILITYSYYEAFTYLAYGVGIAYAIISILILLVLV--VLANKYTKMMQV 302 Query: 306 I 306 + Sbjct: 303 L 303 >emb|CAB61917.1| (AL133278) putative transport system permease protein [Streptomyces coelicolor A3(2)] Length = 310 Score = 72.6 bits (175), Expect = 6e-12 Identities = 72/296 (24%), Positives = 134/296 (44%), Gaps = 23/296 (7%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F +P +++ F L P + T+ SFT R +FVG N+ L+H D F Sbjct: 33 FAAPGLLITGAFILYPFVSTLVNSFTDRRTL----VPGEFVGLANFRELLH----DDMFW 84 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMSPIAVYSLVWY 131 + + ++V ++ L L L LA PG + FR + P ++ I V L+W Sbjct: 85 IGLRNSSLYV--LGVVPALVLLPLLLALLVQKNIPGITFFRSAFYTPVVASIVVVGLIWV 142 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLV---GVSFGMIVFTS 188 + G +N++L LG P+ + + W I++ G+ G+ + MI++ + Sbjct: 143 WLL--DERGLVNSLLETLG--GSPVGFLSD----QWLILLSAMGVTVWKGLGYYMIIYLA 194 Query: 189 ALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 248 AL +P+EL AA VDGA A + + P ++ + V ++ + ++L+ Sbjct: 195 ALANVPRELHEAAAVDGAGAVRRFLTVTVPAVRSTMVLVAALSSVAAFKVFSEVYLMAGP 254 Query: 249 DLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEE 304 TTL + V T G + G A+A +V++ + ++ ++ L+ + E+ Sbjct: 255 SGGPAGEDTTLVMLVQRTGTGLTGR-VGYASAISVVVFAVTVVLMLLVLRADRKED 309 >dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system (permease) [Bacillus halodurans] Length = 418 Score = 71.8 bits (173), Expect = 1e-11 Identities = 70/281 (24%), Positives = 120/281 (41%), Gaps = 12/281 (4%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMRNWNVERY----LHDFVGTYNYYRLVHMFKYDPTF 71 P + ++ + P++ + ++FT N+N+ L D+VG + ++ + + TF Sbjct: 127 PSLFILIFAVIFPILFSFALAFT---NYNLYHSPPANLVDWVGLETFSKIFTVDIWRATF 183 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWY 131 V+ T+++ + V G+ LA+ + FR + +LP P V L++ Sbjct: 184 FDVLSWTVIWTLVASTFQVSLGILLAVVVNQKDLQFKKFFRTILILPWAVPGFVTILIFA 243 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 F+ S N IL G+ PIPW N W ++I + G +G + +V T L Sbjct: 244 GLFNDSFGAINNDILAAFGI--DPIPWMTNSTWTKVALIT-IQGWLGFPYIFLVTTGVLQ 300 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWD-- 249 IP +L AA +DGAS + R I P++ V+ QF + ++L Sbjct: 301 SIPDDLYEAATIDGASVFSKFRHITLPMILIAIAPVIITQFTFNFNNFNIIYLFNGGGPA 360 Query: 250 LVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGI 290 + G T L + LAAA ++LSI I Sbjct: 361 MPGSTAGGTDILVSWIYKLTMQSSQYSLAAALTILLSIFVI 401 >pir||T36913 probable integral membrane sugar transport protein - Streptomyces coelicolor >gi|5420008|emb|CAB46400.1| (AL096743) putative integral membrane sugar transport protein [Streptomyces coelicolor A3(2)] Length = 314 Score = 71.4 bits (172), Expect = 1e-11 Identities = 75/295 (25%), Positives = 130/295 (43%), Gaps = 34/295 (11%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWN-VERYLHDFVGTYNYYRLVHMFKYDPTFK 72 L P +I + + +P + T+ ISF +WN + F G NY ++ DP + Sbjct: 35 LLPALIFMIVVTQLPFVATLVISFF---DWNALYPDARSFTGFANYGDVLS----DPALR 87 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + TTI+ ++++++ GL LAL + G R L + P + +L+W + Sbjct: 88 KSVWTTILLTVAVVLVSLVLGLALALLLDRRFKGRG-VVRTLLIAPFLVVPVAAALLWKH 146 Query: 133 FFHGSSIGTLNAILMRLGLINQPIP-WGQNVPWGAWSIIIFVNGLVG--VSFGMIVFTSA 189 + G LN +L +G P P W N P ++ LV F M++ + Sbjct: 147 VLYNPEYGLLNGLLHYVG---GPQPDWISNTP-----LLAVEASLVWQWTPFMMLILLAG 198 Query: 190 LNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWD 249 L ++ + AARVDGA WQI + P ++ ++L L ++++ +D Sbjct: 199 LQSRDQQQIEAARVDGAGDWQIFVHLTLPHLR---------RYLELGALLGSIYIVQNFD 249 Query: 250 LV----DRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 V GT Y +F + ++ GLA+AA V++ I II L+V+ Sbjct: 250 AVFTITSGGLGTANLPYTVYQSFYQAHEN-GLASAAGVLVVIGSIIIATFALRVV 303 >pir||F75187 probable sugar abc transporter, permease protein PAB2334 - Pyrococcus abyssi (strain Orsay) >gi|5457458|emb|CAB48949.1| (AJ248283) probable SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus abyssi] Length = 284 Score = 71.4 bits (172), Expect = 1e-11 Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 26/291 (8%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKA 73 L+P ++ + F PLI +Y++FT ++++ V DPTF Sbjct: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDT--------------VRRAISDPTFWE 58 Query: 74 VILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYF 133 + TI+ + + + ++ L LALA + L + +S +A L+WY Sbjct: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAA-GLIWYTM 117 Query: 134 FHGSSIGTLNAILMRLGLINQPIPW-GQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 S G +N +L+ LG+I+ PI + G + I+ + ++ + L Sbjct: 118 L--SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252 I +E + AA V GA W RRI+ P++K L + L + + V W L Sbjct: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG-----VVWILAG 230 Query: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303 RD + +D G+A+ A+ +++L I G + +K LK E Sbjct: 231 RDIPVLAGEGFYQLT---EIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278 >pir||T47064 hypothetical protein [imported] - Yersinia pestis >gi|4106652|emb|CAA21407.1| (AL031866) ORF82, len=286 aa, probable ABC transporter protein, similar to many, eg: AE000089_2 Rhizobium sp., (309aa), 37.6% identity in 266 aa overlap, Fasta scores: opt:674, E(): 0, or Thermococcus litoralis, O51924 inner membrane protein MalF, 36.8> Length = 286 Score = 70.6 bits (170), Expect = 2e-11 Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 26/292 (8%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 F P+++++ L L IY+S + + + DF+G N+ ++ +P Sbjct: 10 FTLPLLVVLLLVSFYTLGYAIYLSVHDIDLMSPPPF--DFIGMANFIEVLQ----EPRMW 63 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAF-RLLWLLPRMSPIAVYSLVWY 131 + + T+V+V + + ++ LG A+A F + G R L LLP + V L+W Sbjct: 64 SSLWNTLVYVAGSTVAELV--LGSAIALFISRDFFGRKLVRALLLLPMIVTPIVAGLIWR 121 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALN 191 F+ ++ G N + +G+ PI W N P A + +I + F +++ ++ L+ Sbjct: 122 IFYDPNA-GLFNWLAGLIGI--PPIDWLGN-PSTAMASLILADIWQWTPFIILLVSAGLD 177 Query: 192 QIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLV 251 +P E + AA +DGA W++ I P+MK L L + + ++ ++++ Sbjct: 178 ALPSEPLEAAELDGARGWRLLAFIKLPMMKPIILMALFLRMIDAFKSFDLIYVMTRG--- 234 Query: 252 DRDYGTTLALYVFNT-AFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKF 302 G LA N A+ G QD ++AA ++ II ++ + VL F Sbjct: 235 ----GPALATETTNMYAYLTGFQDFRISAAV-----VIAIINTLLVIAVLSF 277 >dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus halodurans] Length = 328 Score = 70.6 bits (170), Expect = 2e-11 Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 39/294 (13%) Query: 13 FLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFK 72 FL+P I+++ +F + T Y+S + NWN F G NY L F++ + Sbjct: 38 FLAPSILLIGVFIYGFIGWTGYVSLS---NWNSLVPDFSFAGLKNYLFLFQDFRFQADLR 94 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 + TI+F+G +++ G G+A+ + S FR ++ P V +VW + Sbjct: 95 NTLFFTILFIGAVIVL----GQGIAIL-LDQKIRQESLFRNIFFFPMALSFVVTGVVWQW 149 Query: 133 FFHGSSIGTLNAILMRLGL---------INQPIPWGQ---NVPWGAWSIIIFVNGLVGVS 180 + S+ +N L R GL I I G+ +P +++I + Sbjct: 150 LLNPST--GVNLFLERFGLDSRWYTDTTIVPAISLGKIEFGLPVAMIAVVIAAVWQM-TG 206 Query: 181 FGMIVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYP 240 F + ++ + L IP ++ AAR+DGA+ +Q+ +++ PL++ +T +S++ Sbjct: 207 FAVAMYLAGLRGIPDDVREAARMDGANEFQVYWKVILPLLR-----PIT---MSVIIIMA 258 Query: 241 HLFLLVEWDLVDRDYG-------TTLALYVFNTAFGRGEQDQGLAAAAAVILSI 287 H+ L + +DL+ G +Y+F T F QG A A +++S+ Sbjct: 259 HISLKI-FDLIFAMTGPGANFVTDVPGVYMFETTFRGNFYGQGSAIAIIMLVSV 311 >pir||T35790 probable transmembrane sugar transport protein - Streptomyces coelicolor >gi|3288623|emb|CAA19795.1| (AL031013) putative transmembrane sugar transport protein [Streptomyces coelicolor A3(2)] Length = 342 Score = 70.2 bits (169), Expect = 3e-11 Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 23/289 (7%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLH-DFVGTYNYYRLVHMFKYDPTFK 72 L P +++ L +L+P+++ I +SF + + + + + G N+ V P + Sbjct: 43 LLPALLLELLVHLVPMVIGIVMSFKELTQFYIRDWTTAPWAGLDNFTMSVDFDA--PVGE 100 Query: 73 AVILTTIVFVGITLI-INVLGGLGLALATFFMSEKPGSAF-RLLWLLPRMSPIAVYSLVW 130 A++ + +V T++ + + +G A A G R ++L+P P+ + W Sbjct: 101 ALLHSFLVTCAFTILSVGLCWLIGTAAAICMQDAFRGRGLLRAIFLVPYALPVYAAVITW 160 Query: 131 YYFFHGSSIGTLNAILM-RLGLINQPIPW--GQNVPWGAWSIIIFVNGLVGVSFGMIVFT 187 + F + G +N +L +LGL ++P W G N ++ ++ V+ G F ++ Sbjct: 161 AFMFQHDN-GLVNHVLHDQLGLTDKPSFWLIGDN----SFVALLVVSVWKGWPFAFLIVM 215 Query: 188 SALNQIPKELVIAARVDGASAWQISRRI----LFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 + L IPKEL AA +DGA WQ RRI L P+ + L + W F T + Sbjct: 216 AGLQNIPKELYEAAALDGAGVWQQIRRITLPSLRPVNQVLVLVLFLWTFNDFNTPF---- 271 Query: 244 LLVEWDLVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIG 292 V + + ++++++ ++F G A + ++L +L + G Sbjct: 272 --VLFGKAAPEAADLISIHIYQSSFVTWNFGAGSAMSVLLLLFLLLVTG 318 >gb|AAC04469.1| (AF007800) MtlF [Pseudomonas fluorescens] Length = 296 Score = 69.9 bits (168), Expect = 4e-11 Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 17/290 (5%) Query: 12 FFLSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTF 71 F ++P + ++ L+ ++PL +T+Y S +R + + FVG N+ F D F Sbjct: 15 FLVTPSVALLLLWMIVPLGMTLYFSL--IRYNLLYPGENQFVGLENFT----YFITDSGF 68 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAF-RLLWLLPRMSPIAVYSLVW 130 T++ VG L+I+V+ G+ L A SE G R+L + P V +L+W Sbjct: 69 LPGATNTLLLVGSVLLISVVFGV-LISALLEASEFLGRGIVRVLLISPFFIMPTVGALIW 127 Query: 131 YYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSAL 190 G L A+ G +P+ W + P SIII V+ + F +++ +A+ Sbjct: 128 KNLIFHPVSGILAAVWKFFGA--EPVDWLAHYP--LLSIIIIVSWQ-WLPFAILLLMTAM 182 Query: 191 NQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDL 250 + +E AAR+DGA A I + P + V+ + + LL+ + +F Sbjct: 183 QSLDQEQKEAARLDGAGAIAIFWHLTLPHLARPIAVVVMIETIFLLSVFAEIFTTTNGG- 241 Query: 251 VDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVL 300 T LA ++N A + D G+A+A +I ++ I +I ++++ Sbjct: 242 -PGYASTNLAYLIYNQAL--VQFDVGMASAGGLIAVVIANIAAIILVRMI 288 >pir||T46751 inner membrane protein malF [validated] - Thermococcus litoralis >gi|2828821|gb|AAC38137.1| (AF012836) inner membrane protein MalF [Thermococcus litoralis] Length = 300 Score = 69.9 bits (168), Expect = 4e-11 Identities = 69/288 (23%), Positives = 132/288 (44%), Gaps = 19/288 (6%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKAVI 75 P++ +V +F ++P++ T +IS + E+ FVG NY R++ ++ + + Sbjct: 28 PLLTVVLVFIILPVMGTFWISLHRDVTFIPEK---PFVGLRNYLRVLSAREF--WYSTFV 82 Query: 76 LTTIVFVGITLIINVLGGLGLALATFFMSEKPG-SAFRLLWLLPRMSPIAVYSLVWYYFF 134 + FV ++L LGL+ A G R + L+P P + + W + Sbjct: 83 TVSFSFVSVSLETI----LGLSFALILNERLKGRGVLRAIVLIPWAVPTIISARTWELMY 138 Query: 135 HGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIP 194 + S G N IL LG+ P+ W P A+ I+ + ++ + L IP Sbjct: 139 N-YSYGLFNWILSILGV--SPVNW-LGTPISAFFAIVIADVWKTTPLMTLLLLAGLQAIP 194 Query: 195 KELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVDRD 254 ++L AA +DGAS ++ + I PL+K + L + + L + +++L Sbjct: 195 QDLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVLTGGG--PGG 252 Query: 255 YGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKF 302 T+++L FN + G D G+ +A +++ +L + ++ LKV +F Sbjct: 253 ATTSISLLAFN-YYNLG--DYGIGSAISILTFVLVLSFTIVYLKVGRF 297 >pir||E72357 sugar ABC transporter, permease protein - Thermotoga maritima (strain MSB8) >gi|4981115|gb|AAD35681.1|AE001734_8 (AE001734) sugar ABC transporter, permease protein [Thermotoga maritima] Length = 420 Score = 69.9 bits (168), Expect = 4e-11 Identities = 65/233 (27%), Positives = 109/233 (45%), Gaps = 20/233 (8%) Query: 70 TFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLV 129 T VIL+ + I+L+I +L + FF R + +P ++ + SLV Sbjct: 196 TLYYVILSVPSQIFISLMIALLLNSNVKFRVFF---------RTAYFIPFVTSVVAISLV 246 Query: 130 WYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSA 189 W + F+ G LN IL + +PI W ++ W +I I V+ V + ++F + Sbjct: 247 WKWIFN-DEFGLLNYILSLFNI--EPISWLKDERWTIPTIAI-VSVWKTVGYDAVIFLAG 302 Query: 190 LNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWD 249 L I + AA VDGAS+ Q I +PL+ ++L + + +++L +D Sbjct: 303 LQNIDRSYYEAAEVDGASSLQKFFYITWPLLSPTTFFLLIVSLIGAFKVFAEVYVL--YD 360 Query: 250 LVDRDY---GTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKV 299 + Y G TL YVF+ + +Q G+A+AAA IL + +I I +V Sbjct: 361 GLPGPYNNSGMTLVYYVFDLFY--RQQRMGIASAAAYILFAIILIFTFIQYRV 411 >gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus solfataricus] Length = 286 Score = 69.5 bits (167), Expect = 5e-11 Identities = 58/217 (26%), Positives = 100/217 (45%), Gaps = 8/217 (3%) Query: 17 MIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKAVIL 76 ++ A+F I L L I+ + NW++ FVG Y ++ F++ + I Sbjct: 9 LVAPTAIFSAILLYLVIWNAVMSFMNWSLLNSKPTFVGLETYSIVIRTFQFTNSLLHSIE 68 Query: 77 TTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYFFHG 136 +++ V +I N+LG AL F S K S F + + P +AV L+W + F+ Sbjct: 69 LSVILV---VIGNILGIFIAALLYFLNSNKARSTFLSIVIYPLSISMAVNGLIWLWLFN- 124 Query: 137 SSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQIPKE 196 IG ++ +L+R+GL PW + + ++ V+ + + + I K Sbjct: 125 IHIG-VDWLLVRIGL--PQFPWLSSTS-TMFPSLVLVSVWAYTGIAALFYLAGFMNIDKT 180 Query: 197 LVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFL 233 +V AAR+DG SA++I +IL P F+ FL Sbjct: 181 IVEAARLDGTSAFKILYKILIPNSLNSFIIATALLFL 217 >sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALC >gi|479207|pir||S32570 malC protein - Streptococcus pneumoniae >gi|153724|gb|AAA26926.1| (L08611) MalC [Streptococcus pneumoniae] Length = 430 Score = 69.1 bits (166), Expect = 7e-11 Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 18/303 (5%) Query: 16 PMIIMVALFYLIPLILTIYISFTGMRNWNVERY----LHDFVGTYNYYRLVHMFKYDPTF 71 P + + + P+I+T+ I+FT N++ + L D+VG N+ + + + F Sbjct: 130 PSYVAMTFAIIFPVIVTLMIAFT---NYDFQHLPPNKLLDWVGLTNFTNIWSLSTFRSAF 186 Query: 72 KAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWY 131 +V+ TI++ + ++ G+ A+ K F +++ P + L + Sbjct: 187 GSVLSWTIIWALAASTLQIVIGIFTAIIANQPFIKGKRIFGVIFPSSLAVPAFITILTFS 246 Query: 132 YFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGA---WSII--IFVNGLVGVSFGMIVF 186 F+ S+G +N ++ + P G +PW W+ I I + G +G + ++ Sbjct: 247 NMFN-DSVGAINTQVLPILAKFLPFLDGALIPWKTDPTWTKIALIMMQGWLGFPYIYVLT 305 Query: 187 TSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLV 246 L IP +L AA +DGA+AWQ R I FP++ L Q+ + ++L Sbjct: 306 LGILQSIPNDLYEAAYIDGANAWQKFRNITFPMILAVAAPTLISQYTFNFNNFSIMYLFN 365 Query: 247 EW--DLVDRDYGTT--LALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKF 302 V G+T L +++ G Q +AAA +I+SI+ I +I K L Sbjct: 366 GGGPGSVGGGAGSTDILISWIYRLTTGTSPQ-YSMAAAVTLIISIIVISISMIAFKKLHA 424 Query: 303 EEM 305 +M Sbjct: 425 FDM 427 >emb|CAB61178.1| (AL132973) putative binding protein dependent transport protein. [Streptomyces coelicolor A3(2)] Length = 328 Score = 68.7 bits (165), Expect = 9e-11 Identities = 70/288 (24%), Positives = 133/288 (45%), Gaps = 23/288 (7%) Query: 9 ALSFFLSPMIIMVALFYLIPLILTIYISF-----TGMRNWNVERYLHDFVGTYNYYRLVH 63 A ++P ++ +LIP+ +Y+SF G+ + ER + FVG +Y ++ Sbjct: 39 AAGVLMTPFFALLVTVFLIPVGTAVYLSFFSDDQPGL-GFGPERQV--FVGLRSYAAVLT 95 Query: 64 MFKYDPTFKAVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPI 123 DPTF + T ++ I + + V+G L LAL + +L LP P Sbjct: 96 ----DPTFLGGLGTVALYCLIYIPLMVVGALALALLLDSGVVRLRGLAQLGLFLPHAVPG 151 Query: 124 AVYSLVWYYFFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGM 183 + +L+W Y + + L G I V +I ++ N + + M Sbjct: 152 IIAALIWLYLYTPGISPVIE--LFAKGDITIDFLGVHTVIPSIVNIALWSN----LGYNM 205 Query: 184 IVFTSALNQIPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLF 243 +VF +AL +P+E++ A+ VDGA + + ++ PL++ + V + + L + Sbjct: 206 VVFYAALQAVPREVIEASVVDGAGPVRTALQVKTPLVRASIVMVAIFTLIWALQLFTEPM 265 Query: 244 LLVEWD-LVDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGI 290 LL + +++ + ++Y+++ AF R + LAAAA+V+L + I Sbjct: 266 LLSQSSPMINSRFSP--SMYIYDAAFTR--NNYSLAAAASVVLLVCTI 309 >dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system (permease) [Bacillus halodurans] Length = 430 Score = 68.7 bits (165), Expect = 9e-11 Identities = 66/280 (23%), Positives = 127/280 (44%), Gaps = 10/280 (3%) Query: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVE-RYLHDFVGTYNYYRLVHMFKYDPTFK 72 + P +I + + PL+ + ++FT +N R L D+VG N+ +LV + + TF Sbjct: 135 IGPGLIFLIFTVVFPLLFMLGLAFTNYNLYNAPPRNLLDWVGFDNFVQLVTVPIWRETFF 194 Query: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132 +V T+++ + + GL LA+ K R + +LP P V L++ Sbjct: 195 SVFSWTLIWTFVATSCQIALGLFLAMMVNDPRIKFKKFIRTILILPWAVPAFVTILIFSA 254 Query: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192 F+ + G +N ++ + L PW + W +++I+ L G F +FT L Sbjct: 255 MFN-DNFGAINRDIL-IPLFGHGAPWLTDPFWSRFALIMIQTWL-GFPFVFALFTGVLQS 311 Query: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW--DL 250 I + AA +DGA+ Q R I P + + +L Q+ + ++L + + Sbjct: 312 ISSDWYEAADMDGANRLQKFRHITMPHILFATAPLLIMQYAGNFNNFTIIYLFNQGGPPI 371 Query: 251 VDRDYGTT--LALYVFNTAFGRGEQDQGLAAAAAVILSIL 288 ++ G T L +V++ F + +AAA ++I+ ++ Sbjct: 372 RGQNAGGTDILISWVYSLTFENSQ--YSMAAAISIIIGLI 409 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.331 0.146 0.463 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 118071057 Number of Sequences: 2977 Number of extensions: 5017231 Number of successful extensions: 23471 Number of sequences better than 1.0e-10: 86 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 82 Number of HSP's that attempted gapping in prelim test: 23319 Number of HSP's gapped (non-prelim): 95 length of query: 313 length of database: 189,106,746 effective HSP length: 48 effective length of query: 265 effective length of database: 160,379,370 effective search space: 42500533050 effective search space used: 42500533050 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 40 (21.9 bits) S2: 165 (68.7 bits)