BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2231 (PAB2231) DE:TRANSMEMBRANE SUGAR TRANSPORT PROTEIN
         (289 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B75208 transmembrane sugar transport protein PAB2231 - Pyro...   568  e-161
pir||B71243 probable maltose transport system permease protein -...   527  e-149
pir||H72450 probable maltose transport system permease protein A...   296  2e-79
pir||D72378 sugar ABC transporter, permease protein - Thermotoga...   214  8e-55
pir||T35791 probable transmembrane sugar transport protein - Str...   118  6e-26
emb|CAB90877.1| (AL355752) putative maltose permease [Streptomyc...   115  5e-25
pir||T36900 probable integral membrane transport protein - Strep...   112  4e-24
emb|CAB72190.1| (AL138851) putative sugar transporter inner memb...   111  8e-24
pir||A70034 maltodextrin transport system permease homolog yvdI ...   109  3e-23
emb|CAB59590.1| (AL132662) putative sugar transporter inner memb...   108  1e-22
pir||H72282 maltose ABC transporter, permease protein - Thermoto...   107  2e-22
gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium meliloti]     107  2e-22
pir||D70952 probable sugar - Mycobacterium tuberculosis (strain ...   106  4e-22
gb|AAG09708.1|AF218837_3 (AF218837) unknown [Pasteurella multocida]   105  6e-22
pir||T46752 inner membrane protein malG [validated] - Thermococc...   104  1e-21
pir||H72205 maltose ABC transporter, permease protein - Thermoto...   104  2e-21
gb|AAC44395.1| (U43526) ORF-4 [Streptococcus pneumoniae]              103  3e-21
emb|CAA68974.1| (Y07706) putative maltose permease [Streptomyces...   103  3e-21
emb|CAA08866.1| (AJ009832) putative transmembrane sugar transpor...   102  5e-21
pir||H75206 maltose transport system permease protein malg PAB01...   102  5e-21
emb|CAB94619.1| (AL359214) putative sugar transporter integral m...   102  7e-21
pir||S63616 malG protein homolog cymG - Klebsiella oxytoca >gi|8...   102  7e-21
dbj|BAB06643.1| (AP001517) maltose/maltodextrin transport system...   102  7e-21
sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROT...   100  2e-20
dbj|BAB04965.1| (AP001511) unknown conserved protein [Bacillus h...   100  2e-20
pir||T08161 MalG homolog - Pyrococcus furiosus (fragment) >gi|24...   100  3e-20
sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE...    98  1e-19
pir||F75395 ABC transporter, permease protein, MalFG family - De...    98  1e-19
sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1...    96  4e-19
pir||T45203 probable transport protein malg [imported] - Mycobac...    95  8e-19
emb|CAB65653.1| (AJ252161) putative maltose transport membrane p...    94  1e-18
sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M...    94  1e-18
pir||E72395 sugar ABC transporter, permease protein - Thermotoga...    94  1e-18
pir||E70038 maltodextrin transport system permease homolog yvfM ...    93  4e-18
pir||C82557 ABC transporter sugar permease XF2446 [imported] - X...    93  4e-18
sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y...    92  6e-18
pir||E72331 hypothetical protein TM0812 - Thermotoga maritima (s...    92  6e-18
pir||F82397 maltose ABC transporter, permease protein VCA0943 [i...    92  6e-18
gb|AAF70305.1|AF259975_1 (AF259975) MalG [Vibrio cholerae]             92  1e-17
dbj|BAB05943.1| (AP001514) maltose transport system (permease) [...    92  1e-17
emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus]         91  2e-17
pir||C72756 probable multiple sugar-binding transport system per...    91  2e-17
sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M...    90  2e-17
sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M...    90  4e-17
pir||C71369 probable sugar ABC transporter, permease protein (y4...    90  4e-17
dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris] >gi|87...    89  5e-17
emb|CAB61806.1| (AL133236) putative sugar-permease [Streptomyces...    89  5e-17
dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Ba...    89  5e-17
pir||D71123 probable sugar transport system permease protein - P...    89  6e-17
dbj|BAB05585.1| (AP001513) sugar transport system (permease) (bi...    89  6e-17
pir||D69585 maltose transport protein amyC - Bacillus subtilis >...    88  1e-16
emb|CAB72404.1| (AL138978) putative integral membrane transport ...    87  2e-16
pir||S75051 lactose transport system permease protein lacG - Syn...    87  2e-16
emb|CAB95277.1| (AL359779) putative sugar transport integral mem...    87  2e-16
pir||T36086 probable binding protein dependent transport protein...    87  3e-16
emb|CAB71198.1| (AL138538) putative sugar transport inner membra...    86  4e-16
pir||A75504 maltose ABC transporter, permease protein - Deinococ...    86  6e-16
pir||F72203 sugar ABC transporter, permease protein - Thermotoga...    85  9e-16
pir||E72543 probable ABC transporter permease protein APE1633 - ...    85  9e-16
pir||T35672 probable transmembrane transport protein - Streptomy...    84  2e-15
emb|CAB59597.1| (AL132662) probable sugar transport inner membra...    84  2e-15
emb|CAB86097.1| (AL163003) putative sugar transporter inner memb...    84  2e-15
pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (s...    84  2e-15
sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5'REGI...    84  2e-15
dbj|BAB04838.1| (AP001511) lactose transport system (permease) [...    83  3e-15
dbj|BAB05740.1| (AP001514) maltose/maltodextrin transport system...    83  3e-15
pir||G72292 glycerol-3-phosphate ABC transporter, permease prote...    83  5e-15
sp|Q9Z3R7|AGLG_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ...    82  6e-15
emb|CAB70939.1| (AL137778) putative transport system inner membr...    82  8e-15
emb|CAB07809.1| (Z93773) permease [Thermus sp. T2]                     82  1e-14
pir||F70943 hypothetical protein Rv2039c - Mycobacterium tubercu...    82  1e-14
emb|CAB11327.1| (Z98604) possible transport protein [Mycobacteri...    81  1e-14
pir||T30267 suger transport protein - Streptomyces lividans >gi|...    81  1e-14
emb|CAB76328.1| (AL158061) putative binding-protein dependent tr...    81  2e-14
pir||F72379 sugar ABC transporter, permease protein - Thermotoga...    80  2e-14
pir||S75972 hypothetical protein - Synechocystis sp. (strain PCC...    80  3e-14
pir||T36914 probable integral membrane sugar transport protein -...    80  3e-14
gb|AAC04470.1| (AF007800) MtlG [Pseudomonas fluorescens]               79  5e-14
sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE...    79  5e-14
pir||T47063 hypothetical protein [imported] - Yersinia pestis >g...    79  7e-14
pir||T37227 probable sugar transport system permease protein - S...    78  9e-14
gb|AAK41417.1| Sugar ABC transporter [Sulfolobus solfataricus]         78  1e-13
sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE...    78  1e-13
dbj|BAB04622.1| (AP001510) L-arabinose transport system (permeas...    78  1e-13
dbj|BAB07401.1| (AP001519) sugar ABC transporter (permease) [Bac...    78  1e-13
pir||E75187 sugar abc transporter, permease protein PAB2335 - Py...    76  4e-13
emb|CAB87330.1| (AL163672) putative integral membrane transport ...    76  4e-13
pir||T03551 transmembrane maltose transport protein - Rhodobacte...    76  5e-13
emb|CAC11827.1| (AL445065) probable sugar ABC transporter, perme...    75  8e-13
emb|CAA61936.1| (X89810) putative integral protein [Bacillus sub...    75  1e-12
pir||D71220 probable sugar transport membrane protein - Pyrococc...    75  1e-12
pir||A56641 probable membrane transport protein - Clostridium pe...    75  1e-12
gb|AAC45768.1| (AF018073) sorbitol/mannitol transport inner memb...    75  1e-12
sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANS...    74  2e-12
gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus]         74  2e-12
pir||C69588 L-arabinose transport (integral membrane protein) ar...    74  2e-12
emb|CAB61916.1| (AL133278) putative transport system permease pr...    73  3e-12
sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y...    73  4e-12
dbj|BAB07566.1| (AP001520) ABC transporter (permease) [Bacillus ...    73  4e-12
emb|CAA91218.1| (Z56279) integral membrane protein [Thermoanaero...    72  7e-12
emb|CAB61179.1| (AL132973) putative binding protein dependent tr...    72  7e-12
emb|CAC11275.1| (AL445063) inner membrane protein of trehalose/m...    72  9e-12
emb|CAB55534.1| (AL117322) putative binding-protein-dependent tr...    71  1e-11
gb|AAF43782.1|AF135015_1 (AF135015) putative integral membrane p...    71  2e-11
emb|CAB95282.1| (AL359779) putative sugar transport integral mem...    71  2e-11
pir||T30595 sugar transport homolog - Amycolatopsis orientalis >...    69  6e-11
sp|O58967|YC16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE...    69  6e-11
gb|AAD33666.1|AF135398_3 (AF135398) putative integral membrane p...    69  6e-11

>pir||B75208 transmembrane sugar transport protein PAB2231 - Pyrococcus abyssi
           (strain Orsay) >gi|5457622|emb|CAB49113.1| (AJ248283)
           TRANSMEMBRANE SUGAR TRANSPORT PROTEIN [Pyrococcus
           abyssi]
           Length = 289
           
 Score =  568 bits (1447), Expect = e-161
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWIN 60
           MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWIN
Sbjct: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWIN 60

Query: 61  VFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSL 120
           VFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSL
Sbjct: 61  VFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSL 120

Query: 121 MLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDT 180
           MLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDT
Sbjct: 121 MLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDT 180

Query: 181 VPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA 240
           VPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA
Sbjct: 181 VPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA 240

Query: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289
           TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG
Sbjct: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289


>pir||B71243 probable maltose transport system permease protein - Pyrococcus
           horikoshii >gi|3256590|dbj|BAA29273.1| (AP000001) 289aa
           long hypothetical maltose transport system permease
           protein [Pyrococcus horikoshii]
           Length = 289
           
 Score =  527 bits (1344), Expect = e-149
 Identities = 263/289 (91%), Positives = 277/289 (95%)

Query: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWIN 60
           M+DVET+ ++GE+VLILAIFLA+LPL+IGF LLMLSSFST MITNFDF  FH+TLENWIN
Sbjct: 1   MKDVETRSKKGEVVLILAIFLASLPLLIGFTLLMLSSFSTTMITNFDFKDFHVTLENWIN 60

Query: 61  VFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSL 120
           VF+GKLAITGGVRVNM +I LNTLIVALGVSGLVT+ISVMSGYALSRMDFKGRK++I SL
Sbjct: 61  VFRGKLAITGGVRVNMGKIFLNTLIVALGVSGLVTIISVMSGYALSRMDFKGRKLMITSL 120

Query: 121 MLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDT 180
           MLLHAFPGVALIVGVYLLYRISF  E SLVRLYSFIYVIFARAALEVPMSVWLMKGFFD 
Sbjct: 121 MLLHAFPGVALIVGVYLLYRISFPGEQSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDN 180

Query: 181 VPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA 240
           +PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA
Sbjct: 181 IPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLA 240

Query: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289
           TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG
Sbjct: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289


>pir||H72450 probable maltose transport system permease protein APE2252 -
           Aeropyrum pernix (strain K1) >gi|5105953|dbj|BAA81264.1|
           (AP000064) 303aa long hypothetical maltose transport
           system permease protein [Aeropyrum pernix]
           Length = 303
           
 Score =  296 bits (750), Expect = 2e-79
 Identities = 151/288 (52%), Positives = 208/288 (71%), Gaps = 8/288 (2%)

Query: 9   RRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAI 68
           RR ++V+ LA+ LA  P+I+ +GLL+LSSFSTNM+T+   + F  TL+NWI   +G++  
Sbjct: 17  RRLKIVIALALLLAGSPIILTYGLLILSSFSTNMVTDPLLTDFQPTLDNWIMFLRGQITY 76

Query: 69  -TGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFP 127
            TGG+  N+  + L TL VA+GV+   TL+S+++ Y++SRM+FKGR +    L++LHAFP
Sbjct: 77  ATGGLERNVVEMTLVTLTVAVGVALTATLVSLLAAYSISRMEFKGRGVFTAGLIMLHAFP 136

Query: 128 GVALIVGVYLLYRISFSQEPSL-VRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFE 186
           GVALI+GVY+++RI       L    Y+  Y+I ARAALEVPM++WL KGFFD +PWE E
Sbjct: 137 GVALIIGVYMIFRIIGDVLGVLGEEFYAIAYIILARAALEVPMAIWLFKGFFDKIPWELE 196

Query: 187 WSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL----IDQTLATF 242
           WS ++DGASR+ VW  I++PL+KPGI AV +F+FLAGW++ IY   FL    ID +L TF
Sbjct: 197 WSALVDGASRVRVWWSILVPLVKPGIAAVLIFTFLAGWEEFIYFYVFLKPFGID-SLPTF 255

Query: 243 IEANI-EAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289
           IE  +  AE   + +IAAAGT YLLPTI+FF+  Q+LLL  YSGG+KG
Sbjct: 256 IEEIVAAAENYQLTIIAAAGTFYLLPTIVFFVLTQRLLLEAYSGGLKG 303


>pir||D72378 sugar ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4980926|gb|AAD35505.1|AE001721_4
           (AE001721) sugar ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 283
           
 Score =  214 bits (540), Expect = 8e-55
 Identities = 111/282 (39%), Positives = 179/282 (63%), Gaps = 20/282 (7%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           L++I+ +FL T P++IG+  L+L SFS +++  F  ++  LTL+NW  +++    I G  
Sbjct: 17  LIIIVILFLITSPILIGYVWLVLRSFSEDLVNGFVPTK--LTLKNWRFLWE---EIKG-- 69

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
             N+ +  LNT ++ALGV G+   I+ + GYALSR DF GR  ++  ++ LHAFP ++L+
Sbjct: 70  YPNIWQTTLNTALLALGVMGVEVAITSLGGYALSRYDFPGRSSMMKFILALHAFPAISLM 129

Query: 133 VGV-YLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGII 191
             V YLL+ +          L +   VI  +A+LEVP   W+MKGF+D +PWE EW+G++
Sbjct: 130 TAVFYLLWTLKL--------LDTLWGVILLKASLEVPWGTWIMKGFYDGIPWELEWAGLV 181

Query: 192 DGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIEANI- 247
           DG SR  VWR+++LPL+KPGI   A+F+FL+GW + ++V TF+  Q   TL+ +++  I 
Sbjct: 182 DGYSRFQVWRRVLLPLVKPGIAVTAIFAFLSGWSEFVFVNTFIFSQNLWTLSKYVKGFIG 241

Query: 248 EAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIKG 289
           +  +    ++ A G  Y++PTIIFF    + +++   GG+KG
Sbjct: 242 DYRFADYGLVTAVGLFYMIPTIIFFFFVSKHMIKLTIGGVKG 283


>pir||T35791 probable transmembrane sugar transport protein - Streptomyces
           coelicolor >gi|3288624|emb|CAA19796.1| (AL031013)
           putative transmembrane sugar transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 279
           
 Score =  118 bits (294), Expect = 6e-26
 Identities = 70/272 (25%), Positives = 142/272 (51%), Gaps = 19/272 (6%)

Query: 24  LPLIIGFGLLMLSSFSTNMITNFD--FSQFH-----LTLENWINVFQGKLAITGGVRVNM 76
           L L+ GF LL +    ++ +   +   SQFH     LT+  +I+++           V +
Sbjct: 15  LTLLTGFVLLPVYVMVSSSLKPLEDVSSQFHWLPSNLTIRPYIDIWS---------TVPL 65

Query: 77  ARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVY 136
           A+  +N+LIVA   +    +I+V + YA+SR +F+G+++  V+++    FPG+  ++ ++
Sbjct: 66  AKYFVNSLIVAGAATVCSVVIAVFAAYAVSRYEFRGKRVFSVTVLSTQMFPGILFLLPLF 125

Query: 137 LLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASR 196
           L+Y ++      +    S   +I       +P S+W++ G+FD+VP + + + ++DG   
Sbjct: 126 LIY-VNIGNATGIALFGSRGGLILTYLTFSLPFSIWMLIGYFDSVPRDLDEAALVDGCGP 184

Query: 197 ITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID--QTLATFIEANIEAEYTHM 254
           +    K+++P   PGI+AVA+++F+  W ++++      D  +TLA  ++        + 
Sbjct: 185 LRALFKVVVPAAIPGIVAVAVYAFMTAWGEVLFASVMTNDATRTLAVGLQGYSTQNDVYW 244

Query: 255 PMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
             I AA  +  +P +  FL  Q+ L+ G + G
Sbjct: 245 NQIMAASLVVSVPVVAGFLLLQRYLVAGLTAG 276


>emb|CAB90877.1| (AL355752) putative maltose permease [Streptomyces coelicolor
           A3(2)]
           Length = 303
           
 Score =  115 bits (286), Expect = 5e-25
 Identities = 64/212 (30%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           ++LIV+LG + +  L++  +GYA+SRM F G + L+  L++   FP   LIV +Y +   
Sbjct: 99  SSLIVSLGTTVIGVLVAATTGYAVSRMRFPGYRKLMWVLLVTQMFPIAVLIVPMYQIL-- 156

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
               +  L+  Y  + +++   A  VP   WL+KG+FDT+P+E + +G +DG +    + 
Sbjct: 157 ---SKLQLIDNYFGLILVYCSTA--VPYCAWLLKGYFDTIPFEIDEAGRVDGLTPFGTFF 211

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEANIEAEYTHMPMIA 258
           +++LPL +PG+     +SF+  + ++ +  TF++  T  TF   +++ +        ++A
Sbjct: 212 RLILPLARPGLAVAGFYSFITAFGEVAFASTFMLSDTKYTFAVGLQSFVSEHDAQRNLMA 271

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           A   L  +P   FF   Q+ L+ G  +GG KG
Sbjct: 272 ATAVLVAIPVSAFFYLVQKNLVTGLTAGGTKG 303


>pir||T36900 probable integral membrane transport protein - Streptomyces
           coelicolor >gi|5419995|emb|CAB46387.1| (AL096743)
           putative integral membrane transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 298
           
 Score =  112 bits (278), Expect = 4e-24
 Identities = 61/212 (28%), Positives = 115/212 (53%), Gaps = 11/212 (5%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N++ V L    + TL+++  GYAL+R DF+ ++  +++L+     PG  L+V ++ ++  
Sbjct: 94  NSVYVGLATLVMTTLVALAGGYALARFDFRIKRGFMLALLCSQFVPGALLLVPLFEIFA- 152

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
                  L  + S   VI A    ++P+S+ L+  F   VP+  E +  +DG  R   +R
Sbjct: 153 ------GLQMINSLGSVIIAETVFQLPLSIILISNFIKNVPYSLEEAAWVDGCGRFRAFR 206

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPMIA 258
            ++LPL++PG++AV  F+F+  W   ++   FL +   QT+   + + + A+   +  +A
Sbjct: 207 IVVLPLLRPGLIAVGSFAFVHSWNHFLFALMFLNNQSKQTIPVGLNSLMSADSVDLGALA 266

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
           A G +  +P +I F   Q+ L+ G+S G +KG
Sbjct: 267 AGGIVAAVPVVIVFAFIQKWLITGFSAGAVKG 298


>emb|CAB72190.1| (AL138851) putative sugar transporter inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 281
           
 Score =  111 bits (276), Expect = 8e-24
 Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 11/215 (5%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R  LN+LIVA  V     LI+ ++  A++R  F+ R  L++  ++    P  AL + ++ 
Sbjct: 73  RYFLNSLIVAGSVVIASALIAFLAATAVTRFRFRFRTTLLIMFLVAQMVPVEALTIPLFF 132

Query: 138 LYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           L R  F Q  +L  L      I    A  +P ++W+++GF   VP   E +  IDGASR 
Sbjct: 133 LMR-DFGQLNTLGSL------ILPHIAFSLPFAIWMLRGFVKAVPEALEEAAYIDGASRT 185

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANIEAEY----TH 253
               +I+ PL+ PG++A ++FSF++ W D ++ ++F+I  T  + +   +   Y      
Sbjct: 186 RFLWQILFPLVLPGLVATSVFSFISTWNDFLFAKSFIISDTSQSTLPMALLVFYKPDDPD 245

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIK 288
              + AA T+  +P ++FF+  Q+ L+ G  G +K
Sbjct: 246 WGGVMAASTVMTIPVLVFFVLVQRRLVSGLGGAVK 280


>pir||A70034 maltodextrin transport system permease homolog yvdI - Bacillus
           subtilis >gi|1945668|emb|CAB08038.1| (Z94043)
           hypothetical protein [Bacillus subtilis]
           >gi|2635972|emb|CAB15464.1| (Z99121) similar to
           maltodextrin transport system permease [Bacillus
           subtilis]
           Length = 278
           
 Score =  109 bits (271), Expect = 3e-23
 Identities = 81/280 (28%), Positives = 140/280 (49%), Gaps = 26/280 (9%)

Query: 19  IFLATLPLIIGFGLLMLSSFS----TNMITNFDFSQFHLTLENWINVFQGKLAITGGVRV 74
           +FL  L ++I + LL+ +S +     +     DFS    TL+++  +F   L +      
Sbjct: 16  LFLTLLSIVIIYPLLITASSAFRVGNSAAFQLDFSG-SWTLDHFKRLFDETLYLNW---- 70

Query: 75  NMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVG 134
                  NTL++AL V  L   I  ++GY+ SR  F GRK  ++  +++   P +A +  
Sbjct: 71  -----YSNTLVIALSVMVLQVTIVTLAGYSYSRYRFAGRKKSLIFFLIIQMVPTMAALTA 125

Query: 135 VYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGA 194
            Y+L  +  + +      Y F+  I+      +PM+ WLMKG+FDTVP E + +  IDGA
Sbjct: 126 FYVLAMLIGALDQ-----YWFLTAIYIGGG--IPMNTWLMKGYFDTVPREIDEAARIDGA 178

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIEANI-EAE 250
             + ++  I+LPL+KP +   AL++F+A + D +  +  L      T+A  +++ I   +
Sbjct: 179 GHLRIFASIVLPLVKPMLAVQALWAFMAPFGDYLLTKFLLRSPERLTIAVGLQSFISNPQ 238

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              + + AA   L  LP  + F   Q+  + G  +GG KG
Sbjct: 239 QQKVALFAAGAILAALPICVLFFFLQKNFVSGLTAGGTKG 278


>emb|CAB59590.1| (AL132662) putative sugar transporter inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 285
           
 Score =  108 bits (266), Expect = 1e-22
 Identities = 62/215 (28%), Positives = 115/215 (52%), Gaps = 16/215 (7%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N+L+V L    L  L+++ + YA++RM ++GR+  ++++ +    P  +LI+ +Y++ R 
Sbjct: 80  NSLLVTLSAVLLALLVALGAAYAVARMRWRGRRQFMLAVFVAQMAPWESLIIPIYIISRD 139

Query: 142 S--FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
           +    + P+L  +Y  I          +P +V +++GF   +P E E +  +DG +R   
Sbjct: 140 TGMLDRLPTLTLIYFMI---------TLPFTVVVLRGFIAGIPPELEEAAQVDGCTRAGA 190

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ----TLATFIEANIEAEYTHMP 255
           +R++  PL+ PG++A +LF F+  W +  Y    +I Q    TL  ++ +      T   
Sbjct: 191 FRRVAFPLLAPGLMATSLFGFITAWNEFTYANFLIIKQQDSRTLPVWLSSFQSTFGTDWG 250

Query: 256 MIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              AA TL+ LP ++ FL  Q+ +  G  SGG+KG
Sbjct: 251 ATMAAATLFALPALVIFLALQRHVTAGLASGGVKG 285


>pir||H72282 maltose ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4981754|gb|AAD36277.1|AE001777_3
           (AE001777) maltose ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 823
           
 Score =  107 bits (264), Expect = 2e-22
 Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 6/211 (2%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           +LN++IV+L V+ + T +  ++ Y  SRM F GR+  I++L+L+  FPGV  ++ +Y L 
Sbjct: 611 VLNSVIVSLIVAFITTTVCAIAAYPFSRMRFFGRRYGIMALLLIQMFPGVIFMIAIYDLL 670

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                  P  + + +   +IFA     +  +++L+KGF+DT+P   E + I+DGA+R   
Sbjct: 671 NFMGKYIP-FIGIDTLGGLIFAYLT-NIAYNMYLIKGFYDTIPTSLEEAAIVDGATRFQS 728

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEY-THMP 255
           + KI++PL +P +  V L  F+  + + +  R  L +    T A  ++A     Y T   
Sbjct: 729 FYKIIIPLARPILTVVFLLVFIGTFNEYVVARIILQNVRHYTYALGLQAFATGPYETEWG 788

Query: 256 MIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           +  AA  L + P +I FL+ Q+ L+ G + G
Sbjct: 789 LFTAAALLGMTPMVILFLSLQRYLVSGLTRG 819


>gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium meliloti]
           Length = 276
           
 Score =  107 bits (264), Expect = 2e-22
 Identities = 73/282 (25%), Positives = 139/282 (48%), Gaps = 25/282 (8%)

Query: 14  VLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVR 73
           ++ + I +A  P    +  ++ S  S   +   D+    ++L N+  +F           
Sbjct: 14  LVAVIILVAVFPF---YYAILTSLKSGTALFRIDYWPTDISLANYAGIFS---------H 61

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
               R + N+L+VA  V  +  L++V + YAL+R+ F+GR +L+++++ +  FP +A++ 
Sbjct: 62  GTFVRNLGNSLLVATLVVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLA 121

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
           G++ L R        L  ++S  Y+IF      +P +VW++  F   +P E E + I+DG
Sbjct: 122 GLFELIRFVGIFNTPLALIFS--YMIFT-----LPFTVWVLTTFMRDLPIEIEEAAIVDG 174

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEANIEAE 250
           AS   V  ++ +PL+ P ++   L +F+A W + ++  TF    T  T    I       
Sbjct: 175 ASPWVVITRVFMPLMWPALVTTGLLAFIAAWNEFLFALTFTSSNTQRTVPVAIALLSGGS 234

Query: 251 YTHMPM--IAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              +P   I AA  +  +P ++  L  Q+ ++ G  +GG+KG
Sbjct: 235 QFEIPWGNIMAASVIVTVPLVVLVLIFQRRIISGLTAGGVKG 276


>pir||D70952 probable sugar - Mycobacterium tuberculosis (strain H37RV)
           >gi|2695823|emb|CAA15893.1| (AL021006) sugB
           [Mycobacterium tuberculosis]
           Length = 274
           
 Score =  106 bits (261), Expect = 4e-22
 Identities = 69/280 (24%), Positives = 142/280 (50%), Gaps = 36/280 (12%)

Query: 26  LIIGFGLL------MLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVRVNMARI 79
           L++G+ LL       LS   T+ + +       +T +N+  +F+G L          +  
Sbjct: 15  LVVGYALLPVLWIFSLSLKPTSTVKDGKLIPSTVTFDNYRGIFRGDL---------FSSA 65

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           ++N++ + L  + +  ++  M+ YA++R++F G+++LI + +L+  FP ++L+  ++ + 
Sbjct: 66  LINSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIE 125

Query: 140 RIS--FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           R    F   P L+      Y+ FA     +P++++ +  FF  +PW+ E +  +DGA+  
Sbjct: 126 RAIGLFDTWPGLI----LPYITFA-----LPLAIYTLSAFFREIPWDLEKAAKMDGATPG 176

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ-------TLATFIEANIEAE 250
             +RK+++PL  PG++  A+  F+  W D++   +    +        +A F  ++   E
Sbjct: 177 QAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEE 236

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            T    IAA   +  +P I+F L  Q+ ++ G  SG +KG
Sbjct: 237 PT--GSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG 274


>gb|AAG09708.1|AF218837_3 (AF218837) unknown [Pasteurella multocida]
           Length = 277
           
 Score =  105 bits (260), Expect = 6e-22
 Identities = 67/210 (31%), Positives = 112/210 (52%), Gaps = 10/210 (4%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           I N+L ++L  + +   IS M+ Y + R   K   I+   L+  + FP + L +     Y
Sbjct: 72  IKNSLFISLVTTVIAITISSMAAYGIVRFFPKLGSIMSKLLVTTYIFPPILLAIP----Y 127

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
            I+ ++   L    + + V++   +  VP +VWL+ GFF TVP E E +  IDGA++ TV
Sbjct: 128 SIAMAKV-GLTNTTTGLIVVYL--SFSVPYAVWLLVGFFQTVPIEIEEAAKIDGANKFTV 184

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPM 256
           + KI+LPL+ PGI+A A+++F+  W + +Y    + D    T+A  + +   AE      
Sbjct: 185 FFKIVLPLVAPGIVATAIYTFINAWNEFLYALILVNDTSKMTVAVALRSLNGAEILDWGD 244

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           + AA  L ++P++IFF   Q  +  G S G
Sbjct: 245 MMAASVLVVIPSVIFFCFIQNKIASGLSEG 274


>pir||T46752 inner membrane protein malG [validated] - Thermococcus litoralis
           >gi|2828822|gb|AAC38138.1| (AF012836) inner membrane
           protein MalG [Thermococcus litoralis]
           Length = 278
           
 Score =  104 bits (258), Expect = 1e-21
 Identities = 73/282 (25%), Positives = 139/282 (48%), Gaps = 19/282 (6%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           L++I AI +A + L     ++++S             ++  TLEN++ V           
Sbjct: 10  LLIIGAILMAIICLFPFIWMIVVSFAEDPTFLGSPLVEYKSTLENYVRVLSDPT------ 63

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
            ++    + N++I+A  V+     IS ++ YA+SR++FKGR ++ + ++ L  FP ++L+
Sbjct: 64  -LHFPAYLKNSIIIASLVTLTTVSISSLAAYAVSRIEFKGRLLIPIFVLGLSMFPQISLV 122

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
                 Y   F ++   V  Y  +Y  F   A  +P+S+W++  +F  +P + + + +ID
Sbjct: 123 G-----YLFKFIEKLGWVNTYQALY--FPYVAWTLPLSLWILLSYFSQLPKDLDEAAMID 175

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIE--ANIEAE 250
           GASRI     I+LPL  P + + AL  F+A + + ++   F  D    T     A  +  
Sbjct: 176 GASRIKTLTTIILPLSAPALFSTALLVFIAAFNEFMFALLFTTDHRARTVPVGIALFQGV 235

Query: 251 YTHMP--MIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           +  +P   + AA  +  +P +I  L  Q+ ++ G  +G +KG
Sbjct: 236 HGEIPWGSVMAASVISTIPLVIMALLFQKYIVSGLTAGALKG 277


>pir||H72205 maltose ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4982419|gb|AAD36899.1|AE001820_8
           (AE001820) maltose ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 833
           
 Score =  104 bits (256), Expect = 2e-21
 Identities = 66/217 (30%), Positives = 118/217 (53%), Gaps = 7/217 (3%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R ++N++IVA  VS + T +  ++ Y  SRM F GR+  I++L+L+  FP +  +V +Y 
Sbjct: 619 RWVMNSVIVAGLVSLITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPAIMYMVAIYG 678

Query: 138 LYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           L ++   Q    + L S   +IFA     +  +++L+KGF+DT+P   E + +IDGA+R 
Sbjct: 679 LLKL-IGQFLPFLGLDSLGGLIFAYLG-NIAYNMYLIKGFYDTIPSSLEEAAMIDGATRF 736

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFI----EANIEAEYTH 253
             + KI++PL  P +  + + +F+  + + +  R  L D    T+       +  A  T 
Sbjct: 737 QTFYKIVVPLALPILTVIVILTFIGTFNEFVLARIILQDVKNYTYALGLWTFSTGAYETE 796

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
             +  AA  L + P +I FL+ Q+ ++ G + G +KG
Sbjct: 797 WGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVKG 833


>gb|AAC44395.1| (U43526) ORF-4 [Streptococcus pneumoniae]
           Length = 277
           
 Score =  103 bits (254), Expect = 3e-21
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 10/210 (4%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           I N+LI+AL  + +  +IS M+ Y + R   K   I+   L++ + FP + L +     Y
Sbjct: 72  IRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPPILLAIP----Y 127

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
            I+ ++      L+  + V  +     VP +VWL+ GFF TVP   E +  IDGA++   
Sbjct: 128 SIAIAKVGLTNSLFGLMMVYLS---FSVPYAVWLLVGFFQTVPIGIEEAARIDGANKFVT 184

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPM 256
           + K++LP++ PGI+A A+++F+  W + +Y    + +    T+A  + +   +E      
Sbjct: 185 FYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEILDWGD 244

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           + AA  + +LP+IIFF   Q  +  G S G
Sbjct: 245 MMAASVIVVLPSIIFFSIIQNKIASGLSEG 274


>emb|CAA68974.1| (Y07706) putative maltose permease [Streptomyces coelicolor]
           Length = 302
           
 Score =  103 bits (254), Expect = 3e-21
 Identities = 61/212 (28%), Positives = 113/212 (52%), Gaps = 12/212 (5%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           ++LIV+LG + +  L++  +    SRM F G + L+  L++   FP   LIV +Y +   
Sbjct: 99  SSLIVSLGTTVIGVLVAATTA-TRSRMRFPGYRKLMWVLLVTQMFPIAVLIVPMYQIL-- 155

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
               +  L+  Y  + +++   A  VP   WL+KG+FDT+P+E + +G +DG +    + 
Sbjct: 156 ---SKLQLIDNYFGLILVYCSTA--VPYCAWLLKGYFDTIPFEIDEAGRVDGLTPFGTFF 210

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEANIEAEYTHMPMIA 258
           +++LPL +PG+     +SF+  + ++ +  TF++  T  TF   +++ +        ++A
Sbjct: 211 RLILPLARPGLAVAGFYSFITAFGEVAFASTFMLSDTKYTFAVGLQSFVSEHDAQRNLMA 270

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           A   L  +P   FF   Q+ L+ G  +GG KG
Sbjct: 271 ATAVLVAIPVSAFFYLVQKNLVTGLTAGGTKG 302


>emb|CAA08866.1| (AJ009832) putative transmembrane sugar transport protein
           [Thermotoga neapolitana]
           Length = 498
           
 Score =  102 bits (252), Expect = 5e-21
 Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 7/217 (3%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R + N++IVA  VS + T +  ++ Y  SRM F GR+  I++L+L+  FP +  +V +Y 
Sbjct: 284 RWVANSVIVAGLVSIITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPAIMYMVAIYG 343

Query: 138 LYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           L ++   Q    + L S   +IFA     +  +++L+KGF+DT+P   E + +IDGA+R 
Sbjct: 344 LLKL-IGQFLPFLGLDSLGGLIFAYLG-NIAYNMYLIKGFYDTIPSSLEEAAMIDGATRF 401

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFI----EANIEAEYTH 253
             + KI++PL  P +  + + +F+  + + +  R  L D    T+       +  A  T 
Sbjct: 402 QTFYKIVVPLALPILSVIVILTFIGTFNEFVLARIILQDVKNYTYALGLWTFSTGAYETE 461

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
             +  AA  L + P +I FL+ Q+ ++ G + G +KG
Sbjct: 462 WGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVKG 498


>pir||H75206 maltose transport system permease protein malg PAB0121 - Pyrococcus
           abyssi (strain Orsay) >gi|5457612|emb|CAB49103.1|
           (AJ248283) MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN
           MALG [Pyrococcus abyssi]
           Length = 412
           
 Score =  102 bits (252), Expect = 5e-21
 Identities = 88/298 (29%), Positives = 144/298 (47%), Gaps = 38/298 (12%)

Query: 10  RGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAIT 69
           RG +  +L I        IGFG++  +  S ++  N    +    L   I   +G+  +T
Sbjct: 133 RGRIEGVLTITKINRDSSIGFGIIKDAKVSGSINGN----EISGVLRPIIVRNKGEAKLT 188

Query: 70  G-GVRVNMARI--ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAF 126
             G  VN      + N+LI+AL    L  L  V + YA SR+ F GR+ ++   ++    
Sbjct: 189 NLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQV 248

Query: 127 PGVALIVGVYLLYRIS-----FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
            G   I G+  LY I      F++ P+L  +Y         AA  VP + WL+K + D++
Sbjct: 249 AGGLGIAGLIALYGIMVKLGLFNKLPALALVY---------AAGSVPFNTWLLKSYIDSI 299

Query: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---- 237
             +F+ + +IDGA+ + + R ++LP+  PGI  VA+ SF+ GW + I + + L++Q    
Sbjct: 300 NPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFI-LASLLLEQANQP 358

Query: 238 ------TLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIK 288
                 TL   I   I+  Y      AAA  L+ LP  + F+ AQ+ +  G + GG+K
Sbjct: 359 LSVWIYTLMGGIGRGIDWNY-----FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411


>emb|CAB94619.1| (AL359214) putative sugar transporter integral membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 276
           
 Score =  102 bits (251), Expect = 7e-21
 Identities = 61/214 (28%), Positives = 114/214 (52%), Gaps = 11/214 (5%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           + N+LIV +       +I++   +AL+RM FKGR+  IV  ML    P   +++ +Y++ 
Sbjct: 70  VSNSLIVTVCAVVFSLVIALAGSFALARMRFKGRRGFIVGFMLAQMAPWEVMVIAIYMIV 129

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
           R + S   SLV L  F  ++       +P ++  ++GF   VP E E S ++DG +R   
Sbjct: 130 RDA-SMLNSLVPLTLFYMMMI------LPFTILTLRGFVAAVPKELEESAMVDGCTRAQA 182

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQD---IIYVRTFLIDQTLATFIEANIEAEYTHMPM 256
           +R+++LPL+ PG+++ ++F F+  W +   ++ V      QTL  ++ +       +   
Sbjct: 183 FRRVILPLLAPGLMSTSMFGFITAWNELPLVLVVNKEAESQTLPLWLTSFQTVFGDNWGA 242

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
             AA +L+ +P +I F+  Q+  + G  +G +KG
Sbjct: 243 TMAASSLFAIPILILFVYLQRKAVSGLTAGAVKG 276


>pir||S63616 malG protein homolog cymG - Klebsiella oxytoca
           >gi|854234|emb|CAA60006.1| (X86014) cymG [Klebsiella
           oxytoca]
           Length = 277
           
 Score =  102 bits (251), Expect = 7e-21
 Identities = 74/285 (25%), Positives = 138/285 (47%), Gaps = 29/285 (10%)

Query: 14  VLILAIFLATLPLIIG--FGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGG 71
           +L+    L    +++G     +M S    N + +  F++   TLE++ N+  G   +   
Sbjct: 11  ILVYLFLLLNALVVLGPVIWTVMSSLKPGNNLFSSGFTEISFTLEHYHNLLTGTPYL--- 67

Query: 72  VRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVAL 131
                 +   NT I+A     +  ++  ++ +  SR  FK +K +++S+++L  FP    
Sbjct: 68  ------KWYKNTFILATCNMLISLVVVTITAFIFSRYRFKAKKKILMSILVLQMFPAFLS 121

Query: 132 IVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGII 191
           +  +Y+L       + +L+  Y  + +++   +L  P   WL+KG+FD +P   + +  I
Sbjct: 122 MTAIYILL-----SKMNLIDTYIGLLLVYVTGSL--PFMTWLVKGYFDAIPTSLDEAAKI 174

Query: 192 DGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLA----TFIE 244
           DGA  +T++ +I+LPL KP ++ VAL SF   W D I     L  +   TLA    ++I 
Sbjct: 175 DGAGHLTIFFEIILPLAKPILVFVALVSFTGPWMDFILPTLILRSEDKMTLAIGIFSWIS 234

Query: 245 ANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
           +N    +T   + AA   L  +P  + F+  Q+ +  G  SG +K
Sbjct: 235 SNSAENFT---LFAAGALLVAVPITLLFIVTQKHITTGLVSGAVK 276


>dbj|BAB06643.1| (AP001517) maltose/maltodextrin transport system (permease)
           [Bacillus halodurans]
           Length = 280
           
 Score =  102 bits (251), Expect = 7e-21
 Identities = 81/277 (29%), Positives = 133/277 (47%), Gaps = 15/277 (5%)

Query: 14  VLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVR 73
           V  + +FL  + ++I + LL     S N  T+   S+    +   I+ F+    +    R
Sbjct: 11  VTAIYLFLLVMGIVILYPLLWTVGLSLNPGTSLFSSRM---IPETIS-FRHYEWLFFDPR 66

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
            N  +   NTLIVA   S   T +  ++ YA SR  F GR   +   +LL  FP +  +V
Sbjct: 67  SNYLQWYKNTLIVASVTSVCSTFLVALTAYAFSRYRFVGRTYGLYGFLLLQMFPVLMAMV 126

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
            +Y+L         ++  L + + +I       +PM+ +L+KG+FDT+P E + S  +DG
Sbjct: 127 ALYILLN-------TVNLLDTLLGLILIYVGTSIPMNAFLVKGYFDTIPRELDESAKLDG 179

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL---IDQTLATFIEANIEAE 250
           A    ++  IMLPL KP +  VALF+F++ + D I  R  L    + TLA  +   +  +
Sbjct: 180 AGHFRIFFTIMLPLAKPILAVVALFNFMSPFMDFILPRIILRSPENYTLALGLFNFVNDQ 239

Query: 251 Y-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           +  +    AA   L  +P    FL  Q+ L+ G + G
Sbjct: 240 FANNFTRFAAGAILIAIPIATVFLFLQRYLISGLTTG 276


>sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALD
           >gi|479208|pir||S32571 malD protein - Streptococcus
           pneumoniae >gi|153725|gb|AAA26927.1| (L08611) MalD
           [Streptococcus pneumoniae]
           Length = 277
           
 Score =  100 bits (247), Expect = 2e-20
 Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 26/280 (9%)

Query: 19  IFLATLPLIIGFGLLM--LSSFSTNMITNFDF-SQFHLTLENWINVFQGKLAITGGVRVN 75
           ++L  L ++I + LL+  +S+F    ++ F   +   L  +N+         + G     
Sbjct: 15  LYLIGLSIVIIYPLLITIMSAFKAGNVSAFKLDTNIDLNFDNFKGPSLKPCTVLG----- 69

Query: 76  MARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGV 135
                 NTLI+AL    + T I V++GYA SR +F  RK  +V  +++   P +A +   
Sbjct: 70  ----TFNTLIIALITMAVQTSIIVLAGYAYSRYNFLARKQSLVFFLIIQMVPTMAALTAF 125

Query: 136 YLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGAS 195
           +++  +       L  L    ++IF      +PM+ WLMKG+FDTVP   + S  +DGA 
Sbjct: 126 FVMALM-------LNALNHNWFLIFLYVGGGIPMNAWLMKGYFDTVPMSLDESAKLDGAG 178

Query: 196 RITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ----TLATFIEANI-EAE 250
               + +I+LPL++P +   AL++F+  + D I + +FL+ +    T+A  ++  +  A+
Sbjct: 179 HFRRFWQIVLPLVRPMVAVQALWAFMGPFGDYI-LSSFLLREKEYFTVAVGLQTFVNNAK 237

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              +   +A   L  LP  I F   Q+  + G  SGG KG
Sbjct: 238 NLKIAYFSAGAILIALPICILFFFLQKNFVSGLTSGGDKG 277


>dbj|BAB04965.1| (AP001511) unknown conserved protein [Bacillus halodurans]
           Length = 273
           
 Score =  100 bits (247), Expect = 2e-20
 Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 35/282 (12%)

Query: 15  LILAIFLATLPLIIGFGLLMLSSFST--NMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           LI+ +FL   P I  F    L+S      +  +F +     T ++++N    +   T   
Sbjct: 13  LIVFVFLVMFPFIWVF----LTSIKPPREIFASFAWFSAEPTFQSYVNAVNNRPLFT--- 65

Query: 73  RVNMARIILNTLIVALGVSGLVTLISV----MSGYALSRMDFKGRKILIVSLMLLHAFPG 128
                  ++N+ ++    S L TLI++    ++ YAL+R+  KG+ +++ +++    FP 
Sbjct: 66  ------YMMNSFVI----SSLTTLIAIACASLAAYALTRLPIKGKGLILGTVLAASMFPQ 115

Query: 129 VALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWS 188
           +A+I  +Y     SF  +  L    S+  ++     + +P+++W++  FF  +P+E E S
Sbjct: 116 IAIITPIY-----SFITDLGLRN--SYFGLVIPYITISLPLAIWILATFFKKIPFELEES 168

Query: 189 GIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIE--AN 246
             +DGA+    +RKI+ PL  PG+   A+  F+A W + ++  T      L T     + 
Sbjct: 169 AKLDGATPFQTFRKIIFPLAAPGVFTTAILVFIAAWNEYLFALTINTADRLRTVPVGLSL 228

Query: 247 IEAEYTHMPM--IAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
            E++YT +P   I AA  +  +P +I  L  Q+ ++ G + G
Sbjct: 229 YESQYT-IPWGDITAATVIVTVPIVIIVLLFQRRIVAGLTSG 269


>pir||T08161 MalG homolog - Pyrococcus furiosus (fragment)
           >gi|2435437|gb|AAB71228.1| (AF016588) putative integral
           membrane component of starch degradation products
           transport [Pyrococcus furiosus]
           Length = 265
           
 Score = 99.8 bits (245), Expect = 3e-20
 Identities = 68/222 (30%), Positives = 110/222 (48%), Gaps = 29/222 (13%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N+LI+A     L  L  V + YA SR+ F GR+ ++   ++     G   I G+  LY +
Sbjct: 57  NSLILATLTVFLTLLFVVPAAYAFSRLKFFGREHILYFYLMFTQVAGGLGIAGLIALYGM 116

Query: 142 S-----FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASR 196
                 +++ P+L  +Y         AA  VP + WL+K + D++  +F+ + ++DGAS 
Sbjct: 117 LVKLGLYNKLPALAIIY---------AAGSVPFNTWLLKSYIDSISPDFDEAALVDGASY 167

Query: 197 ITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---------TLATFIEANI 247
           + + R ++LP+  PGI  VA+ SF+ GW + I     L ++         TL   I   I
Sbjct: 168 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLTEENQPLSVWIYTLMGGIGRGI 227

Query: 248 EAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIK 288
           +  Y      AAA  L+ LP  I F+ AQ  +  G + GG+K
Sbjct: 228 DWNY-----FAAAALLFALPVFIMFMLAQNYIRSGLTVGGLK 264


>sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJP
           >gi|7442792|pir||C64880 probable multiple sugar
           transport protein b1312 precursor - Escherichia coli
           >gi|1742150|dbj|BAA14888.1| (D90769) Maltose transport
           system permease protein MalG. [Escherichia coli]
           >gi|1742158|dbj|BAA14895.1| (D90770) Maltose transport
           system permease protein MalG. [Escherichia coli]
           >gi|1787571|gb|AAC74394.1| (AE000229) putative transport
           system permease protein [Escherichia coli K12]
           Length = 280
           
 Score = 97.9 bits (240), Expect = 1e-19
 Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 18/240 (7%)

Query: 54  TLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGR 113
           TLE+++++F   +               N+L+V++  S +   + ++  YALSR+ FKGR
Sbjct: 55  TLEHYVDIFNPMI-------FPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGR 107

Query: 114 KILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWL 173
             +  S   ++ F G+ L+V ++ +       +  +        +I       +P +V++
Sbjct: 108 MTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMA-------LIITMVTQTLPTAVFM 160

Query: 174 MKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF 233
           +K +FDT+P E E + ++DG +R+ +  +I +PL   G+++V ++ F+  W D ++   F
Sbjct: 161 LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIF 220

Query: 234 LIDQ---TLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           L      TL   + A           + AA  +  LP +I +  +++ +  G  +GG+KG
Sbjct: 221 LSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280


>pir||F75395 ABC transporter, permease protein, MalFG family - Deinococcus
           radiodurans (strain R1)
           >gi|6459197|gb|AAF11008.1|AE001988_4 (AE001988) ABC
           transporter, permease protein, MalFG family [Deinococcus
           radiodurans]
           Length = 283
           
 Score = 97.9 bits (240), Expect = 1e-19
 Identities = 64/245 (26%), Positives = 125/245 (50%), Gaps = 24/245 (9%)

Query: 52  HLTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFK 111
           H +L+N+  V      +T G      R +LN+++VA G   L  L+SV++ YAL +  FK
Sbjct: 56  HPSLKNFTEV------LTNG---GFLRNLLNSVVVATGTVLLSLLLSVLAAYALGKFRFK 106

Query: 112 GRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIY-VIFARAALEVPMS 170
           G+ +L+  ++ +  FP +A++ G+Y + +  F        LY+  + +I +     +P +
Sbjct: 107 GKSVLMYIILAVSVFPQIAVLSGLYTMVK-GFG-------LYNTWWGLILSYMIFTLPFT 158

Query: 171 VWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYV 230
           VW +  F   +P E E +  +DGA+ +    +++LP++ P ++   L +F+  W + ++ 
Sbjct: 159 VWTLTSFVREIPTELEEAAYVDGATPMQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFA 218

Query: 231 RTFLIDQTLATFIEA----NIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-S 284
            TF  D   +T   A    +   +Y T   +  AA  +  +P ++  L  Q+ ++ G  +
Sbjct: 219 LTFTSDNAASTVPVAIANFSGATQYETPFGLTMAASVIVTVPLLLLVLVFQRNIVSGLTA 278

Query: 285 GGIKG 289
           G +KG
Sbjct: 279 GAVKG 283


>sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1) >gi|421634|pir||S33182
           probable transport protein - Streptomyces antibioticus
           (fragment) >gi|296489|emb|CAA80299.1| (Z22577) membrane
           protein [Streptomyces antibioticus]
           Length = 229
           
 Score = 96.3 bits (236), Expect = 4e-19
 Identities = 64/217 (29%), Positives = 107/217 (48%), Gaps = 11/217 (5%)

Query: 76  MARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGV 135
           +A   LN+L+VAL  + +  LI+    Y ++R   K  +     +++  AFP V LI+ +
Sbjct: 19  LAHAALNSLLVALATAAVTVLIATPMAYVMARHRTKAARAATGWVVVSQAFPFVLLIIPL 78

Query: 136 YLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGAS 195
           +L+ +       SL  L   +YV+++     +P ++W++ G    VP E E +  +DGA 
Sbjct: 79  FLVLK-RLRLIDSLTGLV-LVYVVWS-----LPFALWMLAGHARAVPAELEEAAAVDGAG 131

Query: 196 RITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYT 252
           R+     + +PL+ PGI A ALF+F+  W +  +    L     QTL   +   I AE  
Sbjct: 132 RVRTLTSVTVPLLAPGIAATALFAFVTAWNEFFFALVLLKSPHRQTLPVVLTHFIGAEGV 191

Query: 253 HMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
                 AA  L  LP++ FF   Q+ +  G  +G +K
Sbjct: 192 PTSPAGAAAFLATLPSLAFFALVQRRITSGLLTGAVK 228


>pir||T45203 probable transport protein malg [imported] - Mycobacterium leprae
           >gi|699148|gb|AAA62914.1| (U15180) maltose transport
           inner membrane protein [Mycobacterium leprae]
           Length = 296
           
 Score = 95.2 bits (233), Expect = 8e-19
 Identities = 67/296 (22%), Positives = 140/296 (46%), Gaps = 30/296 (10%)

Query: 4   VETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQ 63
           V    RR  + +I+  F+    L+    +L LS    + + +       +T +N+  +F+
Sbjct: 21  VRVGARRATIWVIIDTFVVGYALLPVLWILSLSLKPASTVKDGKLIPSLVTFDNYRGIFR 80

Query: 64  GKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLL 123
             L          +  ++N++ + L  + +  +   M+ YA++R+ F G+++L+ + +L+
Sbjct: 81  SDL---------FSSALINSIGIGLTTTVIAVMFGAMAAYAIARLAFPGKRLLVGTTLLV 131

Query: 124 HAFPGVALIVGVYLLYRIS--FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
             FP ++L+  ++ + R    F     L+      Y+ FA     +P++++ +  FF  +
Sbjct: 132 TMFPAISLVTPLFNIERRVGLFDTWAGLI----LPYITFA-----LPLAIYTLSAFFAEI 182

Query: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLAT 241
           PW+ E +  +DGA+    +RK+++PL  PG++  A+  F+  W D++   +    +   T
Sbjct: 183 PWDLEKAAKMDGATSGQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTSTKAAIT 242

Query: 242 -------FIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
                  F  ++   E T    IAA   +   P I+F    Q+ ++ G  SG +KG
Sbjct: 243 APVAITNFTGSSQFEEPT--GSIAAGAIVITAPIIVFVWIFQRRIVAGLTSGAVKG 296


>emb|CAB65653.1| (AJ252161) putative maltose transport membrane protein
           [Alicyclobacillus acidocaldarius]
           Length = 301
           
 Score = 94.4 bits (231), Expect = 1e-18
 Identities = 79/301 (26%), Positives = 151/301 (49%), Gaps = 37/301 (12%)

Query: 6   TKQRR----GELVLI----LAIFLATLPLIIGFGLLMLSSFS-TNMITNFDFSQFHLTLE 56
           T++RR    GE V +    + I+   + +++    ++++SF+ +N   +F     + +L 
Sbjct: 21  TRRRRSMQPGEQVALWVSRIVIWCVIVMVLLPMWFVVIASFNPSNSYISFSLFPSNASLA 80

Query: 57  NWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKIL 116
           N+  +FQG    T          + N+L+V + V+   + I+ MS +A S++ F GRK  
Sbjct: 81  NYKALFQGGQFWTW---------VRNSLVVGVVVAMAQSFITAMSAFAFSKLRFYGRKYG 131

Query: 117 IVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKG 176
           +++L+LL  FP +  I   Y     + ++   +  L S+I V+   +A     ++WL+KG
Sbjct: 132 LMTLLLLQMFPNILAIAAFYT----ALAKLNMIDMLGSYILVMLGTSAF----NIWLLKG 183

Query: 177 FFDTVPWEFEWSGIIDGASRITVWRK---IMLPLIKPGILAVALFSFLAGWQDIIYVRTF 233
           + D+VP E + + +IDGA   T W++   + LPL  P ++ +   + +  + + ++  T 
Sbjct: 184 YMDSVPKELDEAAVIDGA---TTWQRFIHVTLPLSTPMMVVIFFLTLVGIFSEYMFAGTI 240

Query: 234 L---IDQTLATFIEANIEAEYT-HMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
           L    + TL   +   I  ++  +    AAA  L  +P  I F  AQ+ L +G  +G +K
Sbjct: 241 LQSPWNYTLGVGMYNLISGQFAKNWGEFAAAALLSAVPLAIVFAVAQRYLTKGLVAGSVK 300

Query: 289 G 289
           G
Sbjct: 301 G 301


>sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
           >gi|72516|pir||MMECMG maltose transport inner membrane
           protein malG - Escherichia coli
           >gi|41951|emb|CAA26628.1| (X02871) put. mal G protein
           (aa 1-296) [Escherichia coli] >gi|396367|gb|AAC43126.1|
           (U00006) maltose transport inner membrane protein
           [Escherichia coli] >gi|1790464|gb|AAC77002.1| (AE000476)
           part of maltose permease, inner membrane [Escherichia
           coli K12]
           Length = 296
           
 Score = 94.4 bits (231), Expect = 1e-18
 Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 13/299 (4%)

Query: 1   MRDVETKQRRGELV---LILAIFLATL--PLIIGFGL-LMLSSFSTNMITNFDFSQFHLT 54
           M  V+ K ++  L    L+L +F+A +  PL++   + L   +F+T  +     S  H  
Sbjct: 1   MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWK 60

Query: 55  LENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRK 114
           L    +V Q    IT      +  +  +  +  +   G+V L S    YA +RM F G+ 
Sbjct: 61  LALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVAL-STTCAYAFARMRFPGKA 119

Query: 115 ILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLM 174
            L+  +++   FP V  +V +Y L+       P  + L +   VIFA     + + VW +
Sbjct: 120 TLLKGMLIFQMFPAVLSLVALYALFDRLGEYIP-FIGLNTHGGVIFAYLG-GIALHVWTI 177

Query: 175 KGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL 234
           KG+F+T+    E +  +DGA+    +R ++LPL  P +  V + SF+A   ++      L
Sbjct: 178 KGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLL 237

Query: 235 ID---QTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            D    TLA  ++  +  +       AAA  +  LP  I FL AQ+ L+ G  +GG+KG
Sbjct: 238 RDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG 296


>pir||E72395 sugar ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4980777|gb|AAD35367.1|AE001710_2
           (AE001710) sugar ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 281
           
 Score = 94.4 bits (231), Expect = 1e-18
 Identities = 61/219 (27%), Positives = 114/219 (51%), Gaps = 16/219 (7%)

Query: 69  TGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKIL--IVSLMLLHAF 126
           TG +  N+   + N+++V + V+ + T+IS ++ YA++R    G  +   I+S+ +L   
Sbjct: 69  TGSIE-NIFPYLRNSIVVGVSVALIGTVISALAAYAIARYRVGGPFLAEWIISIRML--- 124

Query: 127 PGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFE 186
           P +   V +Y+++         L  + ++  +I +   + VP+ VWL+  FF  +P E +
Sbjct: 125 PPIVSAVPLYVIFT-------KLRLINTWWALILSHLVIVVPLGVWLLISFFREIPREID 177

Query: 187 WSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFI 243
            +  +DGA+    +  ++LPL  PG+ AVA+ S +  W + +       D   QTL  F+
Sbjct: 178 EAAYVDGATPFQAFFYVVLPLSAPGLAAVAVLSLIQSWGEFLLALVLTNDARAQTLPIFL 237

Query: 244 EANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
              I         ++AAG + +LP ++F L AQ+ L+RG
Sbjct: 238 GRYITGWRVAWGPLSAAGIVTMLPVVVFALVAQRYLIRG 276


>pir||E70038 maltodextrin transport system permease homolog yvfM - Bacillus
           subtilis >gi|1945713|emb|CAB08007.1| (Z94043)
           hypothetical protein [Bacillus subtilis]
           >gi|2635927|emb|CAB15419.1| (Z99121) similar to
           maltodextrin transport system permease [Bacillus
           subtilis]
           Length = 283
           
 Score = 92.8 bits (227), Expect = 4e-18
 Identities = 78/296 (26%), Positives = 134/296 (44%), Gaps = 27/296 (9%)

Query: 5   ETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTN---MITNFDFSQFHLTLENWINV 61
           + K RR   +L   + LA + +II + LL  +  S N    + +      H T +++  +
Sbjct: 4   DMKVRRYIRLLFSYLLLAFMAVIIVYPLLWTAGASFNPGNSLISTSIIPKHPTFDHYKEL 63

Query: 62  FQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLM 121
           F GK ++         +  +N++ ++L       L    + YA SR  FKGRK  +   +
Sbjct: 64  FAGKESL------QYVQWYVNSMKISLFTMAGSLLCVTFTAYAFSRFRFKGRKYALTLFL 117

Query: 122 LLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
           LL   P  + ++ +++L +I       L  + S   +I       +PM+ +LMKG+ D++
Sbjct: 118 LLQMIPQFSALIALFVLAQI-------LGMINSHWLLILLYIGGLIPMNTYLMKGYMDSI 170

Query: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL------- 234
           P + + S  IDGAS   ++ +I+LPL KP    VA+  F     D +   T L       
Sbjct: 171 PMDLDESAKIDGASSTRIFFQIILPLSKPMAAVVAMNGFTGPLGDFVLSSTILRTPESYT 230

Query: 235 IDQTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           +   L   +   + A YT     AA   L  +P  + F+  Q+  + G  +GG KG
Sbjct: 231 LPVGLFNLVNDVMGASYT---TFAAGALLISIPVAVIFIMLQKNFVSGLTAGGTKG 283


>pir||C82557 ABC transporter sugar permease XF2446 [imported] - Xylella
           fastidiosa (strain 9a5c)
           >gi|9107639|gb|AAF85245.1|AE004053_8 (AE004053) ABC
           transporter sugar permease [Xylella fastidiosa]
           Length = 278
           
 Score = 92.8 bits (227), Expect = 4e-18
 Identities = 60/221 (27%), Positives = 114/221 (51%), Gaps = 13/221 (5%)

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
           RV M R  +N+L+V+L ++    L + M+GYA +++ F GR+ +   L+     P    +
Sbjct: 67  RVGMGRYFVNSLLVSLSITFGSVLFNTMAGYAFAKLRFAGRERVFQLLLTALVIPAQVAM 126

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           + ++LL +        L  + SF  VI    AL     ++L++ +   +P +   +  ID
Sbjct: 127 LPLFLLMK-------HLHLVDSFAGVIMP--ALATVFGIFLVRQYVRGIPNDLIEAARID 177

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIEANIEA 249
           GAS + ++ +I+LP++KP ++ +  F+F+A W D ++    L DQ   TL   + A    
Sbjct: 178 GASEMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALARE 237

Query: 250 EYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIKG 289
               + M+ A   + +LP ++ F+  Q+  ++G   G +KG
Sbjct: 238 HVMDIEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG 278


>sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OR
           >gi|2182562|gb|AAB91804.1| (AE000089) Y4oR [Rhizobium
           sp. NGR234]
           Length = 277
           
 Score = 92.4 bits (226), Expect = 6e-18
 Identities = 69/239 (28%), Positives = 118/239 (48%), Gaps = 21/239 (8%)

Query: 51  FHLTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDF 110
           F  TL  + ++F+    +TG       + I+N+ +V +    LV  +S  + YAL+ +  
Sbjct: 54  FEPTLAGFKHLFE----VTG-----FQKYIINSAVVTIVSVVLVIAVSAPAAYALAHVTK 104

Query: 111 KGRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMS 170
           +G  +L V++++    PG+A+ V VYLL          L +L ++  +I    A+ +P +
Sbjct: 105 RGGTLL-VAILVARIIPGIAIGVPVYLL-------ATRLHQLDTYQALIIINVAVNIPFA 156

Query: 171 VWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIY- 229
           +WLM+ FF  V      + I DG S   V+ KIM+PL+  G+LA A+F F+A W + ++ 
Sbjct: 157 IWLMRSFFMEVHPTLREAAISDGCSEWQVFTKIMMPLVLGGMLATAVFVFIAVWNEFLFA 216

Query: 230 -VRTFLIDQTLATFIEANIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
            + T  +  T A         +Y      + AA  L   P I F    Q+ L++G + G
Sbjct: 217 LILTTSVSPT-APLAMLGFRTQYGVQWDAVGAAAFLVSTPVIAFAFIMQRYLVQGLTMG 274


>pir||E72331 hypothetical protein TM0812 - Thermotoga maritima (strain MSB8)
           >gi|4981342|gb|AAD35894.1|AE001748_10 (AE001748) sugar
           ABC transporter, permease protein, putative [Thermotoga
           maritima]
           Length = 271
           
 Score = 92.4 bits (226), Expect = 6e-18
 Identities = 61/218 (27%), Positives = 108/218 (48%), Gaps = 12/218 (5%)

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
           V +    LNT+I+A   + L  L S+M  Y L+R+DFKG+++++  ++L    P    ++
Sbjct: 62  VKLGNYYLNTIIIAGFGTLLNVLFSLMVAYPLARIDFKGKQLVLFLILLPMMIPVQNTLI 121

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
             YL  R        L  L ++  VI  +A       +++M+  + ++P  FE +  IDG
Sbjct: 122 VNYLTLR-------KLGLLNTYTGVILPQAV--TIFGIFMMRQAYLSIPKSFEDAARIDG 172

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANIEAEYT- 252
           A  + +W KI+ PLIKP I  + +F  +  W + ++    L D        A +    T 
Sbjct: 173 AGELYIWWKIITPLIKPDIATLVVFQVITWWDNFLWPLIVLSDSNKYPLSVALVYLNSTF 232

Query: 253 --HMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIK 288
             +    AA   L +LP ++ F+ AQ+ ++   +GG+K
Sbjct: 233 QVNFRYTAAGIVLAILPVVLLFIFAQRYIINAIAGGVK 270


>pir||F82397 maltose ABC transporter, permease protein VCA0943 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9658380|gb|AAF96839.1| (AE004421) maltose ABC
           transporter, permease protein [Vibrio cholerae]
           Length = 296
           
 Score = 92.4 bits (226), Expect = 6e-18
 Identities = 65/212 (30%), Positives = 109/212 (50%), Gaps = 6/212 (2%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N++ VA   S L+  +S  S YA +RM FKG++ ++ ++M+   FP V  +V +Y L+  
Sbjct: 87  NSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKAMMIFQMFPAVLALVALYALFD- 145

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
              Q    + L +   +IF+     + + VW +KG+F+T+    E +  +DGA+    +R
Sbjct: 146 KLGQYIPFLGLNTHGGLIFSYLG-GIALHVWTIKGYFETIDRSLEEAAALDGATPWQAFR 204

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPMIA 258
            ++LPL  P +  V + SF+    ++      L D    TLA  ++  +  +       A
Sbjct: 205 LVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDVNSYTLAVGMQQYLYPQNYLWGDFA 264

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           AA  L  LP  I FL AQ+ L+ G  +GG+KG
Sbjct: 265 AAAVLSALPITIVFLLAQRWLVGGLTAGGVKG 296


>gb|AAF70305.1|AF259975_1 (AF259975) MalG [Vibrio cholerae]
           Length = 296
           
 Score = 91.7 bits (224), Expect = 1e-17
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 6/212 (2%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N++ VA   S L+  +S  S YA +RM FKG++ ++ ++M+   FP V  +V +Y L+  
Sbjct: 87  NSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKAMMIFQMFPAVLALVALYALFD- 145

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
              Q    + L +   +IF      + + VW +KG+F+T+    E +  +DGA+    +R
Sbjct: 146 KLGQYIPFLGLNTHGGLIFPYLG-GIALHVWTIKGYFETIDRSLEEAAALDGATPWQAFR 204

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPMIA 258
            ++LPL  P +  V + SF+    ++      L D    TLA  ++  +  +       A
Sbjct: 205 LVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDVNSYTLAVGMQQYLYPQNYLWGDFA 264

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           AA  L  LP  I FL AQ+ L+ G  +GG+KG
Sbjct: 265 AAAVLSALPITIVFLLAQRWLVGGLTAGGVKG 296


>dbj|BAB05943.1| (AP001514) maltose transport system (permease) [Bacillus
           halodurans]
           Length = 276
           
 Score = 91.7 bits (224), Expect = 1e-17
 Identities = 73/294 (24%), Positives = 140/294 (46%), Gaps = 23/294 (7%)

Query: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWIN 60
           M++ E  +RR  L+ +LA  +  L  I  + LL ++       ++      + TLEN+  
Sbjct: 1   MQEQEKTKRR--LLTVLAAVITLLHFIPFYILLTMALKERGDFSSRWALPDYFTLENFAT 58

Query: 61  VFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSL 120
            ++         R N+    +NT ++  G + L+ L   M+ Y L+R + K  + +++  
Sbjct: 59  AWE---------RANLGNAFINTGLITAGAAVLLILFGSMAAYPLARRETKLNRFVLLFF 109

Query: 121 MLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFF-D 179
           + +   P +  +V +Y +         +L  L +    I    A  +P++++L  GF   
Sbjct: 110 VAIMVVPPLTALVPLYQMV-------VNLGMLNTRTIAILNNLAAFLPLTIFLYAGFIRS 162

Query: 180 TVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ-- 237
           T+P E E +  IDG + I+++ +I+ PL+KP   +V + S +  W D  +   FL  +  
Sbjct: 163 TIPKELEEAAKIDGCNTISIFFRIVFPLLKPVTASVLIISCVFIWNDYQFAIFFLQSKDV 222

Query: 238 -TLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            TL   + +      +++ ++AAA  + +LP  I FL  Q+  + G  SG +KG
Sbjct: 223 HTLTVALASFFGENQSNLNLVAAAAFMAMLPMTILFLFLQKYFIAGLSSGSVKG 276


>emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus]
           Length = 169
           
 Score = 90.9 bits (222), Expect = 2e-17
 Identities = 47/171 (27%), Positives = 91/171 (52%), Gaps = 12/171 (7%)

Query: 129 VALIVGVYLLY-------RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
           +  ++ +Y++Y       R +   E  LV  Y  +  +F   A  VP+S+W+++GFF ++
Sbjct: 1   ILFLIPIYIMYIYVQNWVRSALGLEVRLVGSYGGL--VFTYTAFFVPLSIWILRGFFASI 58

Query: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLAT 241
           P E E + ++DGA+    + +++LPL  PG+ A A++ FL  W ++++ +    + T   
Sbjct: 59  PKELEEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDELLFAQVLTTEATATV 118

Query: 242 FIE-ANIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            +   N    Y     ++ AA T+  LP ++ F   Q+ L++G  +G +KG
Sbjct: 119 PVGIRNFVGNYQNRYDLVMAAATVATLPVLVLFFFVQRQLIQGLTAGAVKG 169


>pir||C72756 probable multiple sugar-binding transport system permease protein
           APE0040 - Aeropyrum pernix (strain K1)
           >gi|5103428|dbj|BAA78949.1| (AP000058) 302aa long
           hypothetical multiple sugar-binding transport system
           permease protein [Aeropyrum pernix]
           Length = 302
           
 Score = 90.9 bits (222), Expect = 2e-17
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 19/236 (8%)

Query: 54  TLENWINVFQ-GKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKG 112
           T++N+I  +     +++GG         +N+LIVAL  + +    +  + Y  SR  F  
Sbjct: 77  TMDNYIKAWSYDPYSVSGGY--------INSLIVALPATVIPVAAASFAAYGFSRFSFPL 128

Query: 113 RKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVW 172
           +  L +  +LL A P   ++V ++LL +       +L  + +F  +I   +A  +   ++
Sbjct: 129 KSYLFLVTILLMALPQQIVVVPLFLLLK-------NLGLINTFPGIILVHSAWGMAWIIF 181

Query: 173 LMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRT 232
            MK FFD +P E E +  +DGAS   ++ KI+LP+  PGIL+ ++  F   W    +   
Sbjct: 182 FMKNFFDILPREVEEAARVDGASDFRIFYKIVLPMSLPGILSASVLQFTWVWSSFFFELI 241

Query: 233 FLIDQT--LATFIEANIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSG 285
           FLID +  + T   AN++  Y     +IAA     +   +  ++  Q+  +RG+ G
Sbjct: 242 FLIDPSKWVITQRIANMKGTYLVDWGLIAAGSVFAMAVPLAVYMLLQRYYIRGFVG 297


>sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
           >gi|78247|pir||S05333 maltose transport inner membrane
           protein malG - Enterobacter aerogenes
           Length = 296
           
 Score = 90.5 bits (221), Expect = 2e-17
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 15  LILAIFLATL--PLIIGFGL-LMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGG 71
           L+L IF+A +  PL++   + L   +F+T  +     S  H  L    +V      +T  
Sbjct: 18  LLLLIFIAAIMFPLLMVIAISLREGNFATGSLIPDTISWEHWRLALGFSVEHADGRVTPP 77

Query: 72  VRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVAL 131
               +  +  +  +  +   G+V L S    YA +RM F G+  L+  +++   FP V  
Sbjct: 78  PFPVLLWLWNSIKVAGITAIGIVAL-STTCAYAFARMRFPGKATLLKGMLIFQMFPAVLS 136

Query: 132 IVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGII 191
           +V +Y L+     Q    V L +   VIFA     + + VW +KG+F+T+    E +  +
Sbjct: 137 LVALYALFD-RLGQYLPFVGLNTHGGVIFAYMG-GIALHVWTIKGYFETIDGSLEEAAAL 194

Query: 192 DGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIE 248
           DGA+    +R +++PL  P +  V + SF+A   ++      L D    TLA  ++  + 
Sbjct: 195 DGATPWQAFRLVLVPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLN 254

Query: 249 AEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            +       AAA  L  +P  + FL AQ+ L+ G  +GG+KG
Sbjct: 255 PQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVNGLTAGGVKG 296


>sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
           >gi|280124|pir||A60175 maltose transport inner membrane
           protein malG - Salmonella typhimurium
           >gi|47775|emb|CAA38191.1| (X54292) malG [Salmonella
           typhimurium] >gi|154172|gb|AAA27160.1| (M33921) inner
           membrane protein (malG) [Salmonella typhimurium]
           Length = 296
           
 Score = 89.7 bits (219), Expect = 4e-17
 Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 13/299 (4%)

Query: 1   MRDVETKQRRGELVLI---LAIFLATL--PLIIGFGL-LMLSSFSTNMITNFDFSQFHLT 54
           M  V+ K ++  L++    L IF+A +  PL++   + L   +F+T  +     S  H  
Sbjct: 1   MAMVQPKSQKLRLLITHLGLLIFIAAIMFPLLMVIAISLREGNFATGSLIPDKISWEHWR 60

Query: 55  LENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRK 114
           L    +V      +T      +  +  +  I  +   G+V L S    YA +RM F G+ 
Sbjct: 61  LALGFSVEHADGRVTPPPFPVLLWLWNSVKIAGITAIGIVAL-STTCAYAFARMRFPGKA 119

Query: 115 ILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLM 174
            L+  +++   FP V  +V +Y L+     Q    + L +   VIFA     + + VW +
Sbjct: 120 TLLKGMLIFQMFPAVLSLVALYALFD-RLGQYIPFIGLNTHGGVIFAYLG-GIALHVWTI 177

Query: 175 KGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL 234
           KG+F+T+    E +  +DGA+    +R ++LPL  P +  V + SF+A   ++      L
Sbjct: 178 KGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLL 237

Query: 235 ID---QTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            D    TLA  ++  +  +       AAA  L  +P  + FL AQ+ L+ G  +GG+KG
Sbjct: 238 RDVDSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296


>pir||C71369 probable sugar ABC transporter, permease protein (y4oR) - syphilis
           spirochete >gi|3322335|gb|AAC65071.1| (AE001192) sugar
           ABC transporter, permease protein (y4oR) [Treponema
           pallidum]
           Length = 273
           
 Score = 89.7 bits (219), Expect = 4e-17
 Identities = 53/210 (25%), Positives = 101/210 (47%), Gaps = 9/210 (4%)

Query: 75  NMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVG 134
           +  R + N+L+V L  + +       + YA+ R  ++G+K + V+L+LL   P V L++ 
Sbjct: 66  HFGRALYNSLVVTLSSTVVSVSAGAAAAYAMQRFRYRGKKAITVALLLLRVIPPVVLVIP 125

Query: 135 VYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGA 194
           +++ +        +L  + S   +     AL VP +VW++  F   +P   + S  +DG 
Sbjct: 126 IFVWWT-------ALGLVNSLAGLALVYGALNVPFNVWVITTFVAEIPPSLDESAKLDGC 178

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDII--YVRTFLIDQTLATFIEANIEAEYT 252
           S   ++ +I++PLI P +  V++F+F   W + +  +  T    +TL   +   +     
Sbjct: 179 SHWMIFTRIVMPLITPALALVSIFTFRFAWNEYMLGFALTNRKTRTLPVALSLFLTDSGV 238

Query: 253 HMPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
               I AA TL  +P  +F   A + L+ G
Sbjct: 239 EWGRITAAATLIAIPACVFTFAAAKYLVVG 268


>dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris]
           >gi|8777460|dbj|BAA97039.1| (AB029554) E. coli
           MalG-homolog protein~ORF -1 [Thermoactinomyces vulgaris]
           Length = 162
           
 Score = 89.3 bits (218), Expect = 5e-17
 Identities = 53/168 (31%), Positives = 88/168 (51%), Gaps = 17/168 (10%)

Query: 126 FPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEF 185
           FP    +V +YLL  +       L  L + + ++   A  ++P + WL+KG+FDT+P   
Sbjct: 1   FPSTMTMVAIYLLLNM-------LHLLDTHLGLLLFYAGTQIPFNTWLVKGYFDTIPHSL 53

Query: 186 EWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLA-- 240
           + +  IDGA  +T++ K++LPL KP +  V LF+F+    D +  +  L     QTLA  
Sbjct: 54  DEAARIDGAGHLTIFWKVILPLAKPILAVVFLFNFMGPMTDFLLPQIILTSPEHQTLAVG 113

Query: 241 --TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
             +FI  + + +YT   + AA   L  LP  + FL+ Q+  + G + G
Sbjct: 114 LFSFINDDFKKQYT---LFAAGSVLIALPITVIFLSLQRCFISGLTAG 158


>emb|CAB61806.1| (AL133236) putative sugar-permease [Streptomyces coelicolor A3(2)]
           Length = 293
           
 Score = 89.3 bits (218), Expect = 5e-17
 Identities = 65/276 (23%), Positives = 128/276 (45%), Gaps = 26/276 (9%)

Query: 14  VLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVR 73
           V+ +   +A  P+I+   L + S  + +   +++FS       N++ +F          +
Sbjct: 38  VMSVVTLVALAPIIMILVLSVRSGQTASGTYSWNFS-------NYVEIFS---------K 81

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
             +   + N+L V LG +    +I  ++GY +SR+  +      +SL ++ + P +  ++
Sbjct: 82  TPVLDYLYNSLAVTLGTTVFAVVIGALAGYPMSRLRNRFIGGYTLSLFVVQSLPVIVFVI 141

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
            +++++      +  +    S + VIF    + V  + W+M  ++D++P E E +  +DG
Sbjct: 142 PLFVVFA-----KIGMADTLSGVAVIFIAGGMAV--TCWMMAAYYDSIPVELEEAAWVDG 194

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIEANIEAE 250
           AS    + +++L    PGIL+ A+FSFL  W D +    FL  Q   TL   ++   +  
Sbjct: 195 ASLWGGFVRVVLRNSYPGILSAAIFSFLVAWNDYLVATVFLRSQSNFTLPIGLQTYFQQN 254

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
            T    + A   + LLP +I F    +    G  GG
Sbjct: 255 ATDWGPVMAMSVVMLLPPVIVFAVLNRFFSIGGIGG 290


>dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Bacillus halodurans]
           Length = 273
           
 Score = 89.3 bits (218), Expect = 5e-17
 Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 22/268 (8%)

Query: 26  LIIGFGLLMLSSFSTNMITNFD-----FSQFHLTLENW-INVFQGKLAITGGVRVNMARI 79
           L+IG+  +  + F      +F         F L   NW ++ +Q  ++     +    R 
Sbjct: 14  LLIGYAFVTFTPFMWAFFASFKPLNEIVGSFSLFPSNWTLDNYQYIIS----TQPLFVRW 69

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           ++N++I+A+  + L  L + M+GYAL+R+ F+GRK + + ++ +   PG   ++  YL+ 
Sbjct: 70  LMNSVIIAVVGTALNLLFNSMAGYALARLSFRGRKSMFILVLAVLMIPGQVTMIPNYLIL 129

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
           R     E   +  Y  + V     A+     +++M+ FF   P E E +  +DG S++  
Sbjct: 130 R-----ELGWLNSYEGMIV----PAMVNATFIFMMRQFFVNFPKEVEEAAAMDGLSQMGT 180

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEANIEAEYTHMPM 256
           + +I+LP+ KP + A A+F F+A W D +     + D ++ T    + +      T    
Sbjct: 181 FFRIVLPMAKPALAAQAIFVFMALWNDFMRPLIVMSDASMYTLPVGLNSFQSDNVTFWNY 240

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGYS 284
           + AA  ++ LP ++ +    +  + G S
Sbjct: 241 VMAASMIFTLPVLVIYAFFSRFFIDGLS 268


>pir||D71123 probable sugar transport system permease protein - Pyrococcus
           horikoshii >gi|3257163|dbj|BAA29846.1| (AP000003) 279aa
           long hypothetical sugar transport system permease
           protein [Pyrococcus horikoshii]
           Length = 279
           
 Score = 88.9 bits (217), Expect = 6e-17
 Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 43/282 (15%)

Query: 21  LATLPLIIGFGLLMLSSFSTNMITNF-----------DFSQFHLTLENWINVFQGKLAIT 69
           L T  ++I F L+ L  F  +++ +F           ++     TLEN+  +F+ +L   
Sbjct: 13  LLTYSVLIIFALVYLMPFIRSIVASFMEWAQASKYPPEWIPHPFTLENYRKLFRLEL--- 69

Query: 70  GGVRVNMARIILNTLIVA-LGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPG 128
                   R ILNT + A + V+G + + S M+GYA +R+ F GR ++  SL+ L   P 
Sbjct: 70  ------FPRWILNTSLYAGITVTGNI-IFSSMAGYAFARLKFPGRDVIFSSLLSLLMIPM 122

Query: 129 -VALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEW 187
            V L+    ++Y++        + L S + V           S++LM+ +F ++P E   
Sbjct: 123 FVTLVPNYIIIYKLGLVDNIFGLSLLSLVSV----------SSIFLMRQYFTSLPNEIFE 172

Query: 188 SGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQ----DIIYVRT---FLIDQTLA 240
           +  +DG   I  +  I LPL KP + AVA++ FL  W      +I++R+   F +   L+
Sbjct: 173 AARLDGCGPIKSFFYIALPLAKPALGAVAVYQFLGAWNAFIGPLIFLRSPENFTLPVGLS 232

Query: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
              + ++  EYT  P+IA +  +   PTI+ F+   + L+RG
Sbjct: 233 FAFQRSMWTEYT--PIIAGS-IVAAAPTILLFVALNKYLIRG 271


>dbj|BAB05585.1| (AP001513) sugar transport system (permease) (binding protein
           dependent transporter) [Bacillus halodurans]
           Length = 285
           
 Score = 88.9 bits (217), Expect = 6e-17
 Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 44/309 (14%)

Query: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNF-----------DFS 49
           M  V   Q + ++  I  I   T  L+IG GL+M   F   + T+            +F 
Sbjct: 1   MEAVSWYQSKSKMNTIKKILSYTF-LMIG-GLIMAVPFLWMLSTSLKTPGAIFAMPPEFI 58

Query: 50  QFHLTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMD 109
              +T EN+I VF     + G           NT+I+ +  + +    S ++ +A ++++
Sbjct: 59  PREITFENYIRVFTEADLLLG---------FRNTMIIIIPTTAIGIFTSSLAAFAFAKLN 109

Query: 110 FKGRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPM 169
           F GR  L  +L+     PG+  +V  ++L+R        L  L +F  ++         M
Sbjct: 110 FPGRDKLFFALIATMMLPGIVTLVPQFILFR-------ELGWLDTFKPLMIP-GFFGAAM 161

Query: 170 SVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQD--- 226
           +V+ ++ FF T+P +   +  IDG S   ++RKIM+PL KP I+   +   LAG+ D   
Sbjct: 162 TVFFLRQFFMTIPNDLIDAAKIDGLSFFGIFRKIMVPLAKPAIVTQVILGLLAGYNDFMG 221

Query: 227 -IIYVRT---FLIDQTLATFIEANIEAEYT-HMPMIAAAGTLYLLPTIIFFLTAQQLLLR 281
            +IY+ +   F +   LA+F        YT    +I A   + L+PT++ F  AQ+  + 
Sbjct: 222 PLIYLNSPENFTLQLVLASF-----RGYYTSEWGLIMAGSVIALIPTLVAFFFAQKQFIE 276

Query: 282 G-YSGGIKG 289
           G    G+KG
Sbjct: 277 GIVMTGVKG 285


>pir||D69585 maltose transport protein amyC - Bacillus subtilis
           >gi|2293306|gb|AAC00384.1| (AF008220) sugar transporter
           [Bacillus subtilis] >gi|2635513|emb|CAB15007.1| (Z99119)
           maltose transport protein [Bacillus subtilis]
           Length = 276
           
 Score = 88.2 bits (215), Expect = 1e-16
 Identities = 80/300 (26%), Positives = 136/300 (44%), Gaps = 35/300 (11%)

Query: 1   MRDVETKQRRGELVLILAIFLATLPLIIGFGLLMLS-----SFSTNMITNFDFSQFHLTL 55
           MR   TK  R  ++ +LA  +A    I  + LL  S      +S+  I   D S FH   
Sbjct: 1   MRAARTKSMR--IITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADIS-FHNFS 57

Query: 56  ENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLI-SVMSGYALSRMDFKGRK 114
           E W              R ++    +NT+I+  G S L+ +I   ++ Y L+R + K  K
Sbjct: 58  EAW-------------ERASLGNSFINTMIIT-GFSALLLIIFGSLAAYPLARRETKLNK 103

Query: 115 ILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLM 174
            +   L+ +   P +  +V +Y +       +  +V  ++    IF   A  +P++V+L 
Sbjct: 104 AVFALLISIMIIPPLTSMVPLYRMV-----VDAGMVNTHAI--AIFINTAAYMPLTVFLY 156

Query: 175 KGFF-DTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF 233
            GF   T+P E   +  IDGA  + ++  I+ PL+KP    + + S +  W D  +   F
Sbjct: 157 SGFIRSTIPKELVEAARIDGAGMLKIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFF 216

Query: 234 LID---QTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           L D   QTL   +         ++ ++AAA  + +LP ++ FL  Q+  + G  SG +KG
Sbjct: 217 LQDQKVQTLTVAMAGFFGENANNLHLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG 276


>emb|CAB72404.1| (AL138978) putative integral membrane transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 296
           
 Score = 87.4 bits (213), Expect = 2e-16
 Identities = 63/220 (28%), Positives = 113/220 (50%), Gaps = 21/220 (9%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           +LN+LI+  G + L  + +V++ Y LSR   +  +  +++++   + P  A++V VY L+
Sbjct: 88  LLNSLILCGGATLLTVVCAVLAAYPLSRFRSRLNRPFLLTILFATSLPITAIMVPVYALF 147

Query: 140 -RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRIT 198
            R++         + +    IF  AA ++P ++WLMK F D VP E E +   DGAS   
Sbjct: 148 VRVNM--------IDTMQGTIFFFAASQLPFAIWLMKNFMDGVPKELEEAAWTDGASSFQ 199

Query: 199 VWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLI--DQTLATFIEANIEAEYTHMPM 256
              +I+LPL+ PG+  V +FSF+  W +       L+  DQ  A+    +I   + +  M
Sbjct: 200 SLLRIVLPLMGPGVAVVTVFSFVMMWGNFFVPFMLLLSPDQMPAS---VSINDFFGNRGM 256

Query: 257 I-----AAAGTLYLLPTIIFFLTAQQLLLRGYS--GGIKG 289
           +     AA   +Y  P ++ ++   + L  G++  G +KG
Sbjct: 257 VAYGQLAAFSIVYSTPVVLLYVLISRRLGGGFALGGAVKG 296


>pir||S75051 lactose transport system permease protein lacG - Synechocystis sp.
           (strain PCC 6803) >gi|1652996|dbj|BAA17913.1| (D90910)
           lactose transport system permease protein LacG
           [Synechocystis sp.]
           Length = 270
           
 Score = 87.0 bits (212), Expect = 2e-16
 Identities = 57/217 (26%), Positives = 109/217 (49%), Gaps = 15/217 (6%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R + N+++V+     L      ++ Y L+R++F GR + + +++     P   +++ +Y+
Sbjct: 64  RYLFNSVVVSSITVALNLFFCALAAYPLARLNFVGRDMTLAAIVATLMIPFQLIMIPLYI 123

Query: 138 LYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           L         +L    S++ +IF   +L     ++L++  F  VP E E +G IDG   +
Sbjct: 124 L-------AVNLGLRNSYVGIIFP--SLASAFGIFLLRQAFQGVPKELEEAGRIDGCREL 174

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ----TLATFIEANIEAEYTH 253
            +W  IM+P I+P ++ +A+F F+  W D ++    ++DQ    TL   +     A    
Sbjct: 175 GIWWHIMIPAIRPALVTLAIFVFIGAWSDFLW-PLIVLDQPEYYTLPLGVAQLSSALDFD 233

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIKG 289
             +IAAA  + + P I+ FL  Q+ ++    S G+KG
Sbjct: 234 WRLIAAASVIAIAPIIVLFLFVQRYIIPSEASSGVKG 270


>emb|CAB95277.1| (AL359779) putative sugar transport integral membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 275
           
 Score = 87.0 bits (212), Expect = 2e-16
 Identities = 53/210 (25%), Positives = 99/210 (46%), Gaps = 10/210 (4%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           +L +L V+LG   +   IS  + Y L+R   +G + ++   ++    PG+ +   +Y  Y
Sbjct: 70  LLTSLAVSLGAVAICLAISAPAAYGLARFGLRGSRTIVFGTLITQMVPGIVIANALYNSY 129

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                    L  + S+  ++ A A+L +P S+ LM+ F  ++P E   +  IDGA  +  
Sbjct: 130 -------VDLGLVNSYFGLMLADASLGIPFSIVLMRSFMVSIPGEVIEAAQIDGAGPVRT 182

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAEYTHMPM 256
           + +++LP+ +  ++   LF+FL  W D ++  T       + +   I   I A       
Sbjct: 183 FVRVVLPMSRNSLITSGLFAFLFSWSDFMFALTLNTTDEVKPITLGIYQYIGAHVGDWGS 242

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           + AA  L  +P  I  + AQ+ +  G +GG
Sbjct: 243 VMAASVLSAVPAAILLVLAQKYIAAGITGG 272


>pir||T36086 probable binding protein dependent transport protein - Streptomyces
           coelicolor >gi|4678629|emb|CAB41202.1| (AL049661)
           putative binding protein dependent transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 279
           
 Score = 86.6 bits (211), Expect = 3e-16
 Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 13/218 (5%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYR- 140
           N+L ++LG + L   ++ M+GYAL+R+ F+G  ++ + ++     P    IV  YL+ + 
Sbjct: 64  NSLFISLGHTALNLALASMAGYALARIPFRGSTVIFMGVLATMMIPTYTKIVPQYLIAKG 123

Query: 141 -ISFSQEPSLVR-----LYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGA 194
              F     L R     L S+  +I   A    P +++L + F+ ++P E E +  IDG 
Sbjct: 124 IPFFGGNDYLGRGGHGWLDSWWGLIIPGAL--TPFAIFLFRQFYLSLPRELEEAARIDGM 181

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEANIEAEY 251
               ++ ++M PL+KP I  V L +F + W + ++      D  L      + A  +A+ 
Sbjct: 182 GEFGIYARVMTPLVKPAIATVGLLTFESSWNNFLWPLIITTDTDLRVIQVGLSAFQQADQ 241

Query: 252 THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIK 288
                + A  TL  +P +  FL AQ+  ++G+ + GIK
Sbjct: 242 NAWAYMMAGTTLATIPMVALFLLAQRYFVQGFANSGIK 279


>emb|CAB71198.1| (AL138538) putative sugar transport inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 303
           
 Score = 86.2 bits (210), Expect = 4e-16
 Identities = 64/220 (29%), Positives = 110/220 (49%), Gaps = 26/220 (11%)

Query: 82  NTLIVALGVSGLVTLISVMSG----YALSRMDFKGRKI---LIVSLMLLHAFPGVALIVG 134
           NTL+ A    GL T+++V S     YAL++  F+GR +   L++S+M+L   P   +I+ 
Sbjct: 98  NTLLYA----GLGTVLTVASSVPVAYALAKFRFRGRHLSLMLVISMMML---PPQVIIIP 150

Query: 135 VYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGA 194
           +YL +            L   ++ +    A     S++L++ F  T+P E+  +  +DG 
Sbjct: 151 MYLFWAKQLD-------LSGTLWPLIVPMAFGDAFSIFLLRQFLLTIPDEYLDAAKVDGC 203

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ----TLATFIEANIEAE 250
             +    +++LP+ KPGI AVALF F   W D    + +  +     TL+  +E+   A 
Sbjct: 204 GELRTLLRVVLPMAKPGIAAVALFQFFYAWNDYFGPQIYASENPGAWTLSYGLESFKGAH 263

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
           +T   +  AA  L + P I+ F  AQ+  + G +  G+KG
Sbjct: 264 HTDWNLTMAATVLVMAPVILVFFFAQKAFVEGVTLTGVKG 303


>pir||A75504 maltose ABC transporter, permease protein - Deinococcus radiodurans
           (strain R1) >gi|6458258|gb|AAF10143.1|AE001914_5
           (AE001914) maltose ABC transporter, permease protein
           [Deinococcus radiodurans]
           Length = 458
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 12/214 (5%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           + NTL V+     L  L+S  +GYA++R+ F GR  +++  + +  FP    +V +Y L 
Sbjct: 251 VRNTLFVSTVTGLLAILLSTTAGYAMARLRFPGRFQMLLFFIFIQMFPVFLALVAIYTLL 310

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                   +L  + +F  +I A +   +  + W+ KG+ +++P   E + ++DGA+R   
Sbjct: 311 S-------ALGLVNTFTGLILAYSGGAIAFNTWIYKGYVESLPESLEEAAMVDGATRWQT 363

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL--IDQ-TLATFIEANIEAEY-THMP 255
           +R+++LPL    ++ + L  F+  + + I     L  ++Q T+   + +    ++ T   
Sbjct: 364 FRRVVLPLSGSMLVFIFLNQFIGTYAEFILASVLLTGVEQWTVGVMLRSFTSGQFSTKWG 423

Query: 256 MIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
           + AAA TL  LP +  F + Q   + G  +GG+K
Sbjct: 424 VFAAAATLGALPIVALFYSFQNYFVGGATAGGVK 457


>pir||F72203 sugar ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4982437|gb|AAD36915.1|AE001822_8
           (AE001822) sugar ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 273
           
 Score = 85.0 bits (207), Expect = 9e-16
 Identities = 70/285 (24%), Positives = 132/285 (45%), Gaps = 16/285 (5%)

Query: 7   KQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKL 66
           +++ GE++L   + L  L  I  +  L LSS          F    +TLE++  +F    
Sbjct: 2   RKKMGEIILHGVMILLALIWIYPYVWLFLSSIKPPEEIFTRFFPSRITLEHYKYIF---- 57

Query: 67  AITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAF 126
            +   +     R   N+L V L V+  V   S +  Y LS++ FKG   +   ++    F
Sbjct: 58  TMAEKMERPFLRAFFNSLFVTLTVTFSVVFTSSIIAYGLSKLRFKGSNAVFNFIIFQMLF 117

Query: 127 PGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFE 186
           PG   I+ +++L R     +  L   YS + V F  +A     S++++   + T+P ++ 
Sbjct: 118 PGFMFIIPLFVLIR-----KLGLYNTYSAMIVPFLMSA----WSLFMLTQSYKTIPQDYI 168

Query: 187 WSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID--QTLATFIE 244
            +  IDGAS + +  ++M+PL +  +  V LF+F+  W + ++    + D  +   + + 
Sbjct: 169 EAAKIDGASTLWIIFRVMVPLSRSTLSIVGLFTFIGIWDNFLWPLMVVKDYNKMPLSVLL 228

Query: 245 ANIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGGIK 288
           A    EY  ++  + A   +  LP ++ FL  ++  L+G S   K
Sbjct: 229 ATFNHEYAAYVGPLMAGSVIQTLPMVLIFLIFRKQFLQGISMSFK 273


>pir||E72543 probable ABC transporter permease protein APE1633 - Aeropyrum
           pernix (strain K1) >gi|5105321|dbj|BAA80634.1|
           (AP000062) 270aa long hypothetical ABC transporter
           permease protein [Aeropyrum pernix]
           Length = 270
           
 Score = 85.0 bits (207), Expect = 9e-16
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 26/270 (9%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHL-TLENWINVFQGKLAITGG 71
           L ++++  L  L + I +    L  + +N I    F+  H+ TL  WI            
Sbjct: 17  LAVLVSWILVPLAISIVYAFTPLDVYYSNAILTTSFTLDHVKTL--WI------------ 62

Query: 72  VRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVAL 131
             +      L ++ V     G+  L+ +  GYAL+R  F GR  + ++++    FP + +
Sbjct: 63  --LGAGEAFLRSVAVGAMTVGISFLLGLPGGYALARYVFPGRDAVKLAIIATRMFPIIVI 120

Query: 132 IVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGII 191
            V +   +  +     +L+ L        A  A+ +P  V +    F  +P + E +G+I
Sbjct: 121 SVSLLKTF-FNLGLNDTLIGL------ALAHTAMALPFVVIITGSIFGGIPRDLEEAGMI 173

Query: 192 DGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF-LIDQTLATFIEANIEAE 250
            G S I V+ +I LPL  PG+ A  +F+FL  W ++       L+++TL  FI  N    
Sbjct: 174 FGLSSIMVFLRITLPLAAPGLTAAGMFTFLLSWNEVFMASVLTLVNRTLPAFI-LNSAFA 232

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLL 280
               P+  AA  + +LP ++F   A++ L+
Sbjct: 233 TPIEPIRFAAAFMLILPALVFMFLARRYLV 262


>pir||T35672 probable transmembrane transport protein - Streptomyces coelicolor
           >gi|2661679|emb|CAA15784.1| (AL009199) probable
           transmembrane transport protein [Streptomyces coelicolor
           A3(2)]
           Length = 302
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 64/240 (26%), Positives = 114/240 (46%), Gaps = 22/240 (9%)

Query: 2   RDVETKQRRGELVLILAIFLATLPLIIGFGLLMLSSF-STNMITNFDFS-QFHLTLENWI 59
           R   +  RR   +    + L ++ +I+    +++SSF ST  I +  FS   H   EN+ 
Sbjct: 24  RAAASSDRRFAAISHALLILWSVIVIVPMLWVLMSSFKSTGEILSSPFSLPDHWRFENYA 83

Query: 60  NVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVS 119
           N +            N+ +  LN++IV +    LV L+  M  Y L+R +F GR+++   
Sbjct: 84  NAWTD---------ANIGKYFLNSVIVVVSALILVMLLGAMCAYVLARFEFPGRRLIYYV 134

Query: 120 LMLLHAFPGVALIVGVYLLYRIS--FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGF 177
           ++    FP    IV ++   +     +  P L+      YV FA     +P +++ +  F
Sbjct: 135 MLAGLTFPVFLAIVPLFFQLQNFGLLNTRPGLI----LTYVAFA-----LPFTMFFLYSF 185

Query: 178 FDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ 237
           F ++P +   + +IDGA     + ++MLP+ +PG+ AVA+F+FL  W   +       DQ
Sbjct: 186 FRSLPHDVYEAALIDGAGDWRAFFQVMLPMARPGMAAVAIFNFLGLWNQFLLPVALNTDQ 245


>emb|CAB59597.1| (AL132662) probable sugar transport inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 299
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 69/278 (24%), Positives = 132/278 (46%), Gaps = 25/278 (8%)

Query: 21  LATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVRVNMA--- 77
           L   PL + F + ++    +++++N + ++F   L  W +         GG R  +    
Sbjct: 38  LLLAPLALVFAVPLVWLVLSSVMSNAEINRFPPAL--WPSGID-----LGGYRYVLGNAM 90

Query: 78  --RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGV 135
             R  +N+LIV+        +   ++GYA +RM F G ++L+  ++   A P    ++  
Sbjct: 91  FPRWFVNSLIVSAVTVAANLVFGSLAGYAFARMRFAGSRVLMGLMLATMAVPFQLTMIPT 150

Query: 136 YLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGAS 195
           +L+ +     +  L+     + V     +L  P +V+L++ FF ++P E E +  IDG S
Sbjct: 151 FLVMK-----KLGLIDTLGALIV----PSLVTPFAVFLLRQFFLSLPRELEEAAWIDGCS 201

Query: 196 RITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL---IDQTLATFIEANIEAEYT 252
           R+ V  +I+LPL +P +  VA+ +FL  W D+ +    +      TL   +       +T
Sbjct: 202 RLRVLWRIVLPLSRPALATVAVLTFLTTWNDLTWPLIAINHDTQYTLQLGLTTFQGQHHT 261

Query: 253 HMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
               + A   + +LP ++ FL AQ+  ++   S G+KG
Sbjct: 262 QWAAVMAGNVITVLPVLLAFLGAQKTFIQSITSSGLKG 299


>emb|CAB86097.1| (AL163003) putative sugar transporter inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 287
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 83/297 (27%), Positives = 141/297 (46%), Gaps = 44/297 (14%)

Query: 4   VETKQRR----GELVLIL------AIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHL 53
           V T+ RR    G++VL L      A+FLA L   + F  L   + +  + T       H 
Sbjct: 8   VRTRPRRSWTPGQIVLTLLGTAVSAVFLAPLLWAL-FTSLKSETEAVEVPT-------HW 59

Query: 54  TLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGR 113
             ++W       L  TG    N+    +N+L+V++ V+ +V L+S ++GY  +R +F+G+
Sbjct: 60  LPDDWTGQAWKALFETG----NITDWFVNSLVVSVCVTAIVLLVSALAGYGFARTEFRGK 115

Query: 114 KILI----VSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLY-SFIYVIFARAALEVP 168
            +L+      LM+  A  GV L   V         Q+  +V  Y   I    A AA+   
Sbjct: 116 GLLMGVVMAGLMVSPAVLGVPLFTTV---------QQMGMVDTYWGMILPQCAPAAM--- 163

Query: 169 MSVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDII 228
             V+++  FF  +P E E +  IDGA R  V+  I++PL +P + AV +F+F++ W + +
Sbjct: 164 --VYILYKFFQGIPRELEEAAFIDGAGRWRVFFTIIVPLSRPSLAAVGIFTFISSWNNFL 221

Query: 229 --YVRTFLID-QTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
             Y+ T   D  T+   I   + +       + A G +  LP I+ F+  Q+ ++ G
Sbjct: 222 WPYMVTNNPDLMTMPNGIATVMNSYGIQWAQLMAGGLMAGLPLIVVFVFFQRQIVAG 278


>pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (strain MSB8)
           >gi|4981787|gb|AAD36308.1|AE001779_10 (AE001779) sugar
           ABC transporter, permease protein, putative [Thermotoga
           maritima]
           Length = 265
           
 Score = 83.9 bits (204), Expect = 2e-15
 Identities = 72/270 (26%), Positives = 131/270 (47%), Gaps = 24/270 (8%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           L +I++++  T    I    L  SS   N    F  S   LTLE+   +F   + + GG 
Sbjct: 10  LSVIISLWFLTPVFFIVLASLTPSSDYYNPSRIFPSS---LTLEHLYKLF---VTLGGG- 62

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
                +  L ++ VAL   G+  L+ + +GYAL+R  F G+ I+ +S+++  + P + + 
Sbjct: 63  -----KATLVSVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVA 117

Query: 133 VGVYLLY-RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGII 191
           V + +LY R + +         + + V  A A++ +P  V +    F  +  E+E +G++
Sbjct: 118 VPLVVLYMRFNLAD--------TTLGVALAHASMILPFVVLITSSVFSGISVEYEEAGMV 169

Query: 192 DGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF-LIDQTLATFIEANIEAE 250
            G SR   + +I LPL  PG+ A A+F+F+  W ++       L ++TL   I     A 
Sbjct: 170 FGLSRFQAFIRITLPLALPGLAASAIFAFIMSWNEVFASSILTLTNRTLPAHILNTAMAS 229

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLL 280
             +     AAGT+  +P ++F    ++ L+
Sbjct: 230 PDYFKF--AAGTIMAVPAMVFIFFIRKYLV 257


>sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5'REGION (ORF2)
           >gi|632073|pir||S41786 probable sugar transport protein
           2 - thermophilic bacterium RT8.B4
           >gi|311187|gb|AAB42042.1| (L18965) putative membrane
           bound sugar transport protein; ORF2
           [Caldicellulosiruptor sp. Rt8B.4]
           Length = 275
           
 Score = 83.9 bits (204), Expect = 2e-15
 Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 28/281 (9%)

Query: 19  IFLATLPLI--IGFGLLMLSSFSTN---MITNFDFSQFHLTLENWINVFQGKLAITGGVR 73
           IFLA   LI  + F  ++ +SF T    +  N        T+ N+  V +G         
Sbjct: 13  IFLAVWTLIADVPFLFMLFTSFKTQSELLSGNTWQIPRQPTIGNFSTVLEG--------- 63

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
            N    + N++I       L+ +IS M+ +A SR  F    +L   ++   A P    ++
Sbjct: 64  -NFFTYLKNSVIAVSISVVLILIISSMAAFAFSRFKFALNNLLYSLIIAGMAIPIHVTLI 122

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFAR-AALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
            +Y+L         + ++LY  ++ +     AL +PMS++++  F   +P E E +  ID
Sbjct: 123 PIYVL--------TNKIKLYDTVFALIGPYVALSLPMSIFILTEFMREIPLELEEAAKID 174

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEA--NIEAE 250
           G S   ++  I+LPL  P ++ V +++    W + ++        T  T      + +A 
Sbjct: 175 GCSMFRLYSDILLPLSAPALITVGIYNGTYLWNEFVFALVLTSSPTRRTLPLGIWDFQAR 234

Query: 251 Y-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIKG 289
           Y + +P I A  TL LLP +I ++  Q  +++G  +G +KG
Sbjct: 235 YGSDIPAIMAFLTLSLLPMLIAYIFGQDKIIKGMMAGAVKG 275


>dbj|BAB04838.1| (AP001511) lactose transport system (permease) [Bacillus
           halodurans]
           Length = 281
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 62/208 (29%), Positives = 103/208 (48%), Gaps = 13/208 (6%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N+ I+   V     L S +  Y  +R+ FK +K+L   L+     P    ++  Y+L+  
Sbjct: 77  NSFIITTSVVIGAILSSSIVAYGFARLQFKFKKVLFACLIATVMLPVQITLIPQYILFH- 135

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
                 +L  + +F  +I        P  ++L+  F   +P E + + IIDG S   V+ 
Sbjct: 136 ------NLGWVNTFYPLIVPAFLGGTPFFIFLLIQFIRGIPRELDEAAIIDGCSTFGVFW 189

Query: 202 KIMLPLIKPGILAVALFSFLAGWQD----IIYVRTFLIDQTLATFIEANIEAEY-THMPM 256
           +++LPL+KP ++ VA+F+F+  W D    +IY+    I QT+A  +   ++AE  T    
Sbjct: 190 RVILPLLKPALVTVAIFAFMWTWDDFLAPLIYLNKTDI-QTVALGLRNFMDAESGTSWGA 248

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGYS 284
           + A  TL LLP  I FL  Q+ L+ G S
Sbjct: 249 LLAMSTLSLLPQFIIFLFFQRYLVEGIS 276


>dbj|BAB05740.1| (AP001514) maltose/maltodextrin transport system (permease)
           [Bacillus halodurans]
           Length = 283
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 29/295 (9%)

Query: 7   KQRRGELVLILAIFLATLPLIIGFGLLML--SSFST-NMITNFDFSQFHLTLENWINVFQ 63
           KQ++   +L+  + LA +  +I + LL    +SF+  N + +      + +L ++  +F 
Sbjct: 6   KQKKFIRLLLSYLLLAIMVCVIIYPLLWTVGASFNPGNSLISTSIIPENPSLIHYQELFA 65

Query: 64  GKLAITGGVRVNMARIILNTLIVALGVSGLVTLISV-MSGYALSRMDFKGRKILIVSLML 122
           GK ++         +   N+L ++L  + + T+ISV  + YA SR  FKGRK  +   +L
Sbjct: 66  GKGSL------QYVQWYKNSLKISL-FTMVGTMISVSFTAYAFSRFRFKGRKHGLTLFLL 118

Query: 123 LHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVP 182
           L   P  + ++ +++L     +Q   L+  +  + +++      +PM+ +LMKG+ D++P
Sbjct: 119 LQMIPQFSALIALFVL-----AQMLGLMNSHWLLIMLYIGGL--IPMNTYLMKGYMDSIP 171

Query: 183 WEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL-------I 235
            + + S  IDGAS   ++ +I++PL KP +  VA+  F     D I   T L       +
Sbjct: 172 IDLDESARIDGASHTRIFLQIIMPLSKPMLAVVAMNGFTGPLGDFILASTILRTPDAYTL 231

Query: 236 DQTLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              L   +   + A YT     AA   L  +P    F+  Q+  + G  +GG KG
Sbjct: 232 PIGLFNLVNDVMGASYT---KFAAGAILISIPVAFIFVLLQRHFVSGLTAGGTKG 283


>pir||G72292 glycerol-3-phosphate ABC transporter, permease protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981668|gb|AAD36198.1|AE001770_10 (AE001770)
           glycerol-3-phosphate ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 276
           
 Score = 82.7 bits (201), Expect = 5e-15
 Identities = 67/285 (23%), Positives = 136/285 (47%), Gaps = 27/285 (9%)

Query: 12  ELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTL--ENWINVFQGKLAIT 69
           E++L++  F+  LPL +    + +S      + ++    F  +   +N++  F+      
Sbjct: 12  EIILVMVTFIMALPLFLA---ITISFQKPEAVFSYPPKFFPTSFYWKNYVEAFK------ 62

Query: 70  GGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGV 129
               V +AR+ LN+LIVA  ++        ++G+A S  +FK +KI+  +L      P  
Sbjct: 63  ---YVPLARLFLNSLIVASLITLGKLTTGALAGFAFSHFNFKSKKIMFATLFATLFLPAE 119

Query: 130 ALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSG 189
            +++    L   +F      V  Y  + + F  +A     + +LM+  F T+P E + + 
Sbjct: 120 TVMILPLFLIMKTFGW----VNTYWALTIPFMASAT----NTFLMRQHFLTIPRELQDAA 171

Query: 190 IIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF---IEAN 246
           +IDGAS +  + K+++PL K  +   ++ +F+  W   ++     ++  + T    ++  
Sbjct: 172 LIDGASYMQFFWKVLIPLSKHMLAGASIINFVYAWNMYLWPLIVSMEDKMKTVQVGVKML 231

Query: 247 IEAEYTHMPMIAAAGTLY-LLPTIIFFLTAQQLLLRG-YSGGIKG 289
           ++AE  +   +  AGT+  L PT++ FL  Q L ++     G+KG
Sbjct: 232 MQAESANNWGVIMAGTVVALAPTVVMFLALQNLFVKSLVRSGMKG 276


>sp|Q9Z3R7|AGLG_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE PROTEIN AGLG
           >gi|4210905|gb|AAD12048.1| (AF045609) AglG
           [Sinorhizobium meliloti]
           Length = 305
           
 Score = 82.3 bits (200), Expect = 6e-15
 Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 16/241 (6%)

Query: 54  TLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGR 113
           TL+N+  V              + R  LN+L VA+  + +  LI+  + YAL+ M F GR
Sbjct: 75  TLDNYAEVLSA---------AGIGRSFLNSLTVAVPSTVIPILIAAFAAYALAWMPFPGR 125

Query: 114 KILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWL 173
            +L+  ++ L   P    ++ +  LY    +      + Y  I++  A     +P++++L
Sbjct: 126 AVLLAVVVGLLVVPLQMSLIPLLQLYNGVGAFFGVSAKTYMGIWL--AHTGFGLPLAIYL 183

Query: 174 MKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF 233
           ++ +   +P E   S  +DGAS   ++ KI+LPL  P + + A+F FL  W D++    F
Sbjct: 184 LRNYMAGLPREIMESARVDGASDFDIFVKIILPLSFPALASFAIFQFLWTWNDLLVAIVF 243

Query: 234 L---IDQTLATFIEAN-IEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
           L    D+ + T    N + +   +  ++ A+  + ++  +I F   Q+ L+RG  +G +K
Sbjct: 244 LGAGDDKLVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIVFFALQRYLVRGLLAGSVK 303

Query: 289 G 289
           G
Sbjct: 304 G 304


>emb|CAB70939.1| (AL137778) putative transport system inner membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 303
           
 Score = 81.9 bits (199), Expect = 8e-15
 Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 74  VNMARIILNTLIVALG-VSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
           ++++   +N+L +A+G V G+V   S ++ YA +++ F GR +L   ++     P   L+
Sbjct: 90  ISISTFFVNSLFLAVGSVIGIVVSCS-LTAYAFAKIRFAGRNLLFTLMIGTLLLPYHVLL 148

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           +  Y+L+R       +L  + ++  ++  +        V+LM  F   +P E + +  +D
Sbjct: 149 IPQYVLFR-------NLDMINTYTPLLLGKYLATEAFFVFLMVQFMRNLPRELDEAARLD 201

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQD----IIYVR---TFLIDQTLATFIEA 245
           G   + ++  I+LPL +P ++  A+F+F+  W D    +IY+     + I   L  F++ 
Sbjct: 202 GCGHLRIYWSIVLPLCRPALITSAIFTFINSWNDFMGPLIYLNEPGKYTISLGLKMFVDQ 261

Query: 246 NIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
              A Y  M    A   + LLP + FFL  Q+ L+ G  + G+KG
Sbjct: 262 EGLANYGGM---IAMSLVALLPVLAFFLAFQRYLIDGMATSGLKG 303


>emb|CAB07809.1| (Z93773) permease [Thermus sp. T2]
           Length = 274
           
 Score = 81.5 bits (198), Expect = 1e-14
 Identities = 75/276 (27%), Positives = 130/276 (46%), Gaps = 24/276 (8%)

Query: 21  LATLPLIIGFGLLMLSSFSTNMITNFDFSQF--HLTLENWINVFQGKLAITGGVRVNMAR 78
           LA L L+   G L++S  + + +T   F  +   +TL N++  ++       GVR    R
Sbjct: 16  LALLWLLPMAGALLVSFRTLDDLTLRGFWSWPEEITLANYVRAWE-----EAGVR----R 66

Query: 79  IILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLL 138
            +LN+ I+ L     V L+  M+ YAL R  F+    L +  +  +  P   L++ V+ L
Sbjct: 67  YLLNSFIITLPSLVGVLLLLSMAAYALVRFRFRWAFPLYLLFLAFNMVPFQMLMLPVFRL 126

Query: 139 YRISFSQEPSLVRLYSFIYV-IFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
                    + + +Y   +  I    A ++  + ++++ F  T+P     S +IDGA   
Sbjct: 127 --------SNQLGVYDTYWAPILFHTAFQLGFATFVLRNFARTIPPSLFESAVIDGAGEW 178

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIE--ANIEAEY-THM 254
           T++R+I  PL+ PGI AVA   F   + D ++    L    L       AN+  +Y T  
Sbjct: 179 TLFRRIAWPLMLPGIAAVATLEFTWIFNDFLWALVLLGRDELKPITTGLANLRGQYITDW 238

Query: 255 PMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
           P+I AA  +  +PT++ F   Q+  ++G + G  KG
Sbjct: 239 PLIVAASLMATVPTLLVFFGLQRYFIQGLTLGATKG 274


>pir||F70943 hypothetical protein Rv2039c - Mycobacterium tuberculosis  (strain
           H37RV) >gi|2896776|emb|CAA17253.1| (AL021899)
           hypothetical protein Rv2039c [Mycobacterium
           tuberculosis]
           Length = 280
           
 Score = 81.5 bits (198), Expect = 1e-14
 Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 11/208 (5%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R+  NT++ A  V+        ++GYA +R+ F+GR  L V  +     P    ++   +
Sbjct: 73  RMFFNTVLYAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQVI 132

Query: 138 LYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRI 197
           L RI        V      + +            +LM+ FF T+P + E + I+DG S  
Sbjct: 133 LMRI--------VGWVDTPWAMIVPGLFGSAFGTYLMRQFFRTLPTDLEEAAILDGCSPW 184

Query: 198 TVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFI--EANIEAEY-THM 254
            ++ +I+LP  +P +L + + +++  W D ++    +   +LAT       +  EY    
Sbjct: 185 QIYWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEYVARW 244

Query: 255 PMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
           P++ AA  L L+P +I +  AQ+  +RG
Sbjct: 245 PVLMAASMLMLVPLVILYAVAQRSFVRG 272


>emb|CAB11327.1| (Z98604) possible transport protein [Mycobacterium leprae]
           Length = 283
           
 Score = 81.1 bits (197), Expect = 1e-14
 Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 13/209 (6%)

Query: 78  RIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYL 137
           R+  NT++ A  V+        ++GYA +R+ F+GR  L V  +     P    I+  ++
Sbjct: 76  RMFFNTVLYAGYVTVGQVFFCSLAGYAFARLQFRGRDALFVLYLGTLMMPLTVTIIPQFI 135

Query: 138 LYRI-SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASR 196
           L R+  ++  P         + +            +LM+ FF T+P + E + I+DG S 
Sbjct: 136 LMRVLGWTDTP---------WAMIVPGLFGSAFGTYLMRQFFRTLPSDLEEAAILDGCSP 186

Query: 197 ITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFI--EANIEAEY-TH 253
             ++ +++LP  KP +  +A+ +++  W D ++    +   +LAT       +  EY T 
Sbjct: 187 WQIYWRVLLPHAKPAVGVLAVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRMRGEYGTC 246

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
            P+I A   L +LP +I +  AQ+  +RG
Sbjct: 247 WPVIMATSMLIILPLVIIYTIAQRAFVRG 275


>pir||T30267 suger transport protein - Streptomyces lividans
           >gi|3342712|gb|AAC46449.1| (U22894) integral membrane
           protein [Streptomyces lividans]
           >gi|7649656|emb|CAB88988.1| (AL353864) putative membrane
           transport protein. [Streptomyces coelicolor A3(2)]
           Length = 291
           
 Score = 81.1 bits (197), Expect = 1e-14
 Identities = 61/230 (26%), Positives = 109/230 (46%), Gaps = 30/230 (13%)

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
           +++A ++ NTL  A G      +  V + Y+LS++     K ++  ++     P   L+V
Sbjct: 78  MDLASLLGNTLFYAFGALAFQLVFDVAAAYSLSKLRPVFGKAILGLMLATLMIPATVLVV 137

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWL-----------MKGFFDTVP 182
             YL                     IF R  L  P ++WL           +K FFD++P
Sbjct: 138 PQYLTV---------------LDVPIFERNLLNTPWAIWLPSVTNAFNIFLLKRFFDSIP 182

Query: 183 WEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF 242
            E   +  +DGAS +   R I+LP+ +P +  V++F+ +  W+D ++    L D +  T 
Sbjct: 183 RELLDAASMDGASPMRTLRSIVLPISRPILGVVSIFAIVGVWKDFLWPMLTLPDPSKQT- 241

Query: 243 IEANIEAEYTHMP--MIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           +   I +    +P  ++ AA T+  LPT++ FL  Q+ ++ G  +GG+KG
Sbjct: 242 LNVGIYSLSNGVPVNVLIAALTMASLPTLVIFLIFQRNIMSGLTAGGLKG 291


>emb|CAB76328.1| (AL158061) putative binding-protein dependent transport protein.
           [Streptomyces coelicolor A3(2)]
           Length = 316
           
 Score = 80.8 bits (196), Expect = 2e-14
 Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 34/226 (15%)

Query: 78  RIILNTLI-VALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVY 136
           R +LNTL+ V LG  G  T ++V+ GYAL++ DF GR+ +   ++   A PG AL V  +
Sbjct: 104 RWLLNTLLYVGLGAGG-ATFLAVLGGYALAKFDFPGRRSVFAVVIGAVAVPGTALAVPTF 162

Query: 137 LLY-RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGF-FDTVPWEFEWSGIIDGA 194
           L++ ++  +  P  V + S I           P  ++LM  F  + +P E   +  IDGA
Sbjct: 163 LMFSKMGLTNTPWAVIIPSLI----------SPFGLYLMWVFATEAIPTELMEAARIDGA 212

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID--------------QTLA 240
             +  + ++ LPL+ PGI+ V LF+ +A W +       L D              Q  A
Sbjct: 213 GELRTFFRVALPLLAPGIVTVLLFTMVATWNNYFLPLVMLKDPDWYPLTLGLNSWNQQAA 272

Query: 241 TFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           T   A  EA +    ++     + +LP I  FL  Q+    G + G
Sbjct: 273 T---AGGEAVFN---LVVTGSLITILPLIAAFLLLQKYWQSGLAAG 312


>pir||F72379 sugar ABC transporter, permease protein - Thermotoga maritima
           (strain MSB8) >gi|4980936|gb|AAD35515.1|AE001721_14
           (AE001721) sugar ABC transporter, permease protein
           [Thermotoga maritima]
           Length = 271
           
 Score = 80.4 bits (195), Expect = 2e-14
 Identities = 67/240 (27%), Positives = 116/240 (47%), Gaps = 23/240 (9%)

Query: 54  TLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGR 113
           +LE +INV +           ++   + NTL VA   + +  L+SVM+GY L++  F G 
Sbjct: 49  SLEGYINVIK---------EYDLLTYLRNTLFVATVATVITVLVSVMTGYGLAKGKFWGI 99

Query: 114 KILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWL 173
           + +     +        ++V ++++ R       SL  + S   +I    A+  P  +++
Sbjct: 100 RPVNSMFTMTMFVSAQVIMVPLFVVIR-------SLGLINSLWGLIIP--AVYTPTGMFM 150

Query: 174 MKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF 233
              +   +P E   S  IDGA+   ++ +I+ PL KP + A+A+FSF   W D +     
Sbjct: 151 AVQYMKDIPDELLESAKIDGANEWQIFWRIVFPLSKPLVAALAIFSFTWRWNDFVLPLLV 210

Query: 234 LIDQTLAT--FIEANIEAEY--THMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIK 288
           +  + L T     A I+ EY       I A  TL ++PT+I FL  Q+L ++G  +GG+K
Sbjct: 211 VNRRNLYTLQLALATIQEEYGGAEWNTILAFSTLTIIPTLIIFLLFQRLFMKGIMAGGLK 270


>pir||S75972 hypothetical protein - Synechocystis sp. (strain PCC 6803)
           >gi|1001332|dbj|BAA10819.1| (D64006) membrane bound
           sugar transport protein [Synechocystis sp.]
           Length = 298
           
 Score = 80.0 bits (194), Expect = 3e-14
 Identities = 70/292 (23%), Positives = 127/292 (42%), Gaps = 27/292 (9%)

Query: 9   RRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAI 68
           R+ E    L I +A L +   + L  L  F +++    D     +    W  VF   L I
Sbjct: 16  RKTEFWQKLPIHIAILTIAFIWTLPSLGLFISSLRPRGD-----MLSTGWWTVFWHPLEI 70

Query: 69  TGGVRVN---------MARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVS 119
           T     N         M    LN+L +A+  + +   I+  + YA + M F GR++L + 
Sbjct: 71  TQFYLGNYGDVLRSSGMGEAFLNSLTIAVPATVIPIAIATFAAYAFAWMTFPGRQLLFIL 130

Query: 120 LMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFD 179
           ++ L   P    ++ V  +Y         L    +F+ V  A  A  +P+ ++L++ +  
Sbjct: 131 VVCLLVVPLQTTLIPVLRVYA-------QLGLAGTFLGVWLAHTAYGLPLGIYLLRNYIG 183

Query: 180 TVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL---ID 236
            +P +   +  +DGAS + ++ K+++PL  P I + A+F FL  W D++    +L    D
Sbjct: 184 ALPKDLIEAAAVDGASHLKIFTKLIVPLSMPAIASFAVFQFLWVWNDLLVALVYLGGTAD 243

Query: 237 QTLATFIEANIEAEYTHMPMIAAAGTL--YLLPTIIFFLTAQQLLLRGYSGG 286
               T   +N+         +  AG     ++P ++FF   Q+  +RG   G
Sbjct: 244 VAPVTIQLSNLVGSRGQDWYLLTAGAFISMIVPLMVFF-GLQRYFVRGILAG 294


>pir||T36914 probable integral membrane sugar transport protein - Streptomyces
           coelicolor >gi|5420009|emb|CAB46401.1| (AL096743)
           putative integral membrane sugar transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 292
           
 Score = 80.0 bits (194), Expect = 3e-14
 Identities = 65/287 (22%), Positives = 137/287 (47%), Gaps = 18/287 (6%)

Query: 4   VETKQRRGELVLILAIFLATLPLIIGFGLLMLSSF--STNMITNFDFSQFHLTLENWINV 61
           V T++R G  + ++A +L  +   +    + L+SF   ++  TN       LTL+ +   
Sbjct: 17  VRTRRRAGAGLGLVA-WLVGIVFFLPIAWMALTSFHSESDAATNPPSFAASLTLDGYREF 75

Query: 62  FQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLM 121
           F       GG     A  ++N+ + ++  +  V ++++ + YALS    K    ++   +
Sbjct: 76  F----GAGGGASPWPA--LVNSAVASIASTLFVLVLALPAAYALSIRPVKKWTDVLFFFL 129

Query: 122 LLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
                P VA ++ +YL     F++   ++     + +++   ++ +P++VW+M+ F   V
Sbjct: 130 STKMLPVVAGLLPIYL-----FAKNTDMLDNIWLLVILYT--SMNLPIAVWMMQSFLAEV 182

Query: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVR--TFLIDQTL 239
           P     +  +DGA   T+  +++ P+  PGI A +L  F+  W ++++ R  T ++ +T 
Sbjct: 183 PVAIIEAARVDGAKLPTILVRVVAPIALPGIAATSLICFIFSWNELLFARVLTGVVAETA 242

Query: 240 ATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
             F+   I ++   +  + AA  +  LP +     AQ  L++G S G
Sbjct: 243 PVFLTGFITSQGLFLAKVCAASLVISLPVLAAGFAAQDKLVQGLSLG 289


>gb|AAC04470.1| (AF007800) MtlG [Pseudomonas fluorescens]
           Length = 276
           
 Score = 79.2 bits (192), Expect = 5e-14
 Identities = 68/289 (23%), Positives = 133/289 (45%), Gaps = 28/289 (9%)

Query: 7   KQRRGELVLILAIFLATLPLIIGFGL--LMLSSFSTNMITNFDFSQFHLT--LENWINVF 62
           +Q R    L+L      + ++I F +  ++L+SF T +       QF  T  LEN++++ 
Sbjct: 4   QQSRRLQSLLLGTLAWAIAILIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHIN 63

Query: 63  QGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLML 122
           +         R N      N+++++   + L  LISV + Y+++  + K  K  ++ ++ 
Sbjct: 64  E---------RSNYFSYAWNSVLISFSATALCLLISVPAAYSMAFYETKRTKSTLLWMLS 114

Query: 123 LHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVP 182
               P V +++ +YLL +       S   L + I +I     + +P+ VW++  +F  +P
Sbjct: 115 TKMLPPVGVLMPIYLLAK-------SFGLLDTRIALIIIYTLINLPIVVWMVYTYFKDIP 167

Query: 183 WEFEWSGIIDGASRITVWR---KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQT- 238
            +   +  +DGA   T+W+   +++LP+ K G+ +  L S +  W +  +          
Sbjct: 168 KDILEAARLDGA---TLWQEMVRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSNAA 224

Query: 239 -LATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
            L   I +    E      ++A  TL   P +IF   +Q+ L+RG S G
Sbjct: 225 PLTALIASYSSPEGLFWAKLSAVSTLACAPILIFGWISQKQLVRGLSFG 273


>sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1036
           >gi|7442815|pir||H71096 probable maltose transport inner
           membrane protein - Pyrococcus horikoshii
           >gi|3257451|dbj|BAA30134.1| (AP000004) 276aa long
           hypothetical maltose transport inner membrane protein
           [Pyrococcus horikoshii]
           Length = 276
           
 Score = 79.2 bits (192), Expect = 5e-14
 Identities = 68/284 (23%), Positives = 131/284 (45%), Gaps = 19/284 (6%)

Query: 7   KQRRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITN--FDFSQFHLTLENWINVFQG 64
           K RR  +  ++A  +    LI   G+LM S      I +  +    F +TL+N+IN    
Sbjct: 2   KIRRYLVPNLIAWSIGIAWLIPFMGVLMASVRPYEEIVSGWWHLHPFTITLKNYINALNH 61

Query: 65  KLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLH 124
            +   G         + N+LIVA+  + +  +++ ++ YA +R  F  +  L   ++LL 
Sbjct: 62  PMFPIG-------EGLKNSLIVAIPSTIVPVIVASLAAYAFARYSFPIKHYLFAFIVLLM 114

Query: 125 AFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWE 184
           A P    +V +Y L R +         L +F  +I   +A  +   ++ M+ +F  +P +
Sbjct: 115 ALPQQMTVVPLYFLLRNAHL-------LNTFRGLIIVHSAWGLAWIIFFMRNYFSMLPTD 167

Query: 185 FEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL--IDQTLATF 242
            E +  IDGA+   ++ KI+LP+  PG+++ ++  F   W D      FL   ++ +AT 
Sbjct: 168 VEEAAKIDGATDFQIFYKIVLPMALPGLISASILQFTWVWSDFFLALVFLQNPEKYVATQ 227

Query: 243 IEANIEAEY-THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSG 285
               +  +Y     ++ AA  + +L  ++ +   Q+  + G  G
Sbjct: 228 RLPLLRGQYFVDWGLLTAASIMVMLVPLLVYALFQKYYISGMIG 271


>pir||T47063 hypothetical protein [imported] - Yersinia pestis
           >gi|4106651|emb|CAA21406.1| (AL031866) ORF81, len=275
           aa, highly similar to Pseudomonas fluorescens MtlG
           (mtlG), 39.5% identity in 258 aa overlap, Fasta scores:
           opt: 689,E():0, also similar to E. coli MalG protein
           35.3% identity in 266 aa overlap, Fasta scores: opt:
           626, E(): 0. >
           Length = 275
           
 Score = 78.8 bits (191), Expect = 7e-14
 Identities = 59/211 (27%), Positives = 103/211 (47%), Gaps = 13/211 (6%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSR-MDFKGRKILIVSLMLLHAFPGVALIVGVYLLYR 140
           N+L+++L  + L  ++  +  Y L   ++ KGR    +  M L   P + L++ VY L  
Sbjct: 74  NSLLISLVSTFLCLILGALFAYGLVFFIERKGRAKQFI--MSLRYAPVIMLVIPVYYLIT 131

Query: 141 ISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVW 200
                   L    +++ +I       VP ++ ++  FF+ +P E   +  +DGAS   V+
Sbjct: 132 -------KLGMTDNYLVLILVYTVANVPFTILMVTTFFEDIPPEIREAARVDGASEWRVF 184

Query: 201 RKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID--QTLATFIEANIEAEYTHMPMIA 258
             +MLPL + G+ A  + +    W +   V T   D  QTL   I + +  + T    + 
Sbjct: 185 LSVMLPLARTGLAASGVLTLFFIWNEFQIVLTLSGDSTQTLPVAITSFLTFQGTEWGPLT 244

Query: 259 AAGTLYLLPTIIFFLTAQQLLLRGYS-GGIK 288
           AAGTL +LP ++  L  Q+ L+RG + GG+K
Sbjct: 245 AAGTLVMLPMLVLGLLVQKHLVRGLTMGGVK 275


>pir||T37227 probable sugar transport system permease protein - Streptomyces
           coelicolor >gi|3559967|emb|CAA20605.1| (AL031514)
           putative sugar transport system permease protein
           [Streptomyces coelicolor A3(2)]
           Length = 293
           
 Score = 78.4 bits (190), Expect = 9e-14
 Identities = 64/280 (22%), Positives = 127/280 (44%), Gaps = 25/280 (8%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           L L++A  +  LPL++ F L  L S+        D        ++W+N      A + G 
Sbjct: 30  LSLVVASAVVLLPLLVVF-LTSLKSYGEVS----DGQGALAPPDDWLNFSNYATAFSDG- 83

Query: 73  RVNMARIILNTLIVAL-GVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVAL 131
             ++ +   NT  + L  ++G V +I  M+ YA+ R DF+ +K+++   ++    P V  
Sbjct: 84  --HLLQAFGNTAFILLFSITGTV-IIGSMTAYAIDRFDFRLKKLVMALFLIATLVPAVTT 140

Query: 132 IVGVYLLYRIS--FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSG 189
            V  + +      F+   + + LY    ++          ++++   F   +P   + + 
Sbjct: 141 QVATFQVVNGFGLFNTRWAPILLYMGTDIV----------AIYIFLQFIRGIPRSLDEAA 190

Query: 190 IIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANIEA 249
            +DGA+  T++RKI+ PL+KP +  V +   +  + D      ++ D+ L T   A    
Sbjct: 191 RLDGANSFTIYRKIIFPLLKPAVATVVIIKGITTYNDFYIPFLYMPDEDLGTMSTALFRF 250

Query: 250 E---YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           +     H   I+A   L ++PT++ FL  Q+ +  G++ G
Sbjct: 251 KGPFGAHWENISAGAVLVIVPTLVIFLFLQRYIYNGFAQG 290


>gb|AAK41417.1| Sugar ABC transporter [Sulfolobus solfataricus]
           Length = 296
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 18/219 (8%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           I N+LI+A   + +  L+++++GYALSR++   +KIL   + ++  FP  A  V +YLL+
Sbjct: 85  IRNSLILAGSTAIISVLLALITGYALSRLNVPAKKILATFIYIVTFFPYTASAVPLYLLF 144

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                   +   L ++I +I A        + ++ K   D++P  +E   +IDG SR   
Sbjct: 145 --------AKFHLLNYIGLILAYTPGTSIFAAFIAKLSIDSIPPSYEEIAMIDGLSRFGA 196

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ------TLATFIEANI--EAEY 251
           + +I++ L  P +   AL  F   + D     +FL+        T+  +  A +  +A  
Sbjct: 197 FLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTATIGLYYMAGLLNQASA 256

Query: 252 THMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS--GGIK 288
               + AA   +  +P +  F+ +Q+++ R YS   G+K
Sbjct: 257 PAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVK 295


>sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURM
           >gi|7442794|pir||D70018 sugar permease homolog yurM -
           Bacillus subtilis >gi|2635755|emb|CAB15248.1| (Z99120)
           similar to sugar permease [Bacillus subtilis]
           Length = 300
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 13/214 (6%)

Query: 81  LNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYR 140
           +N++IV      +   IS  + Y LSR +FKG+   +V  +      G+ L   V L+  
Sbjct: 95  MNSVIVTALTCVITVFISAWAAYGLSRFEFKGKGFFLVLCL-----GGLMLTPQVSLVPL 149

Query: 141 ISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVW 200
            S  Q   L   Y  +  I   AA  +P ++ L++ +F ++  E E +  +DG +   V+
Sbjct: 150 YSIIQSLGLYNTYWAL--ILPYAAYRIPFTIILIRSYFLSISKELEEAAYLDGCTSFGVF 207

Query: 201 RKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANI----EAEYTHMPM 256
            +I LP+  P ++   + +    W + ++   F+ D+ L T I A +    +A  T   +
Sbjct: 208 FRIFLPMSVPILVTSGILTAYHTWNEFMFAIIFIDDENLRT-IPAGLMQFRDALQTDWGV 266

Query: 257 IAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
           + A  T+   P II FL  Q+  +RG  SG +KG
Sbjct: 267 LLAGLTISAAPIIILFLLMQKYFVRGIASGSVKG 300


>dbj|BAB04622.1| (AP001510) L-arabinose transport system (permease) [Bacillus
           halodurans]
           Length = 279
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 32/280 (11%)

Query: 20  FLATLPLIIGFGLLMLSSF--STNMITN---FDFSQFHLTLENWINVF-QGKLAITGGVR 73
           F+A  PL+     L+L+SF  ST ++ N     F    LTL+N+I +F +  L  T    
Sbjct: 22  FIAVFPLLN----LILASFRPSTELMRNGITLIFDPSTLTLDNFIYIFTEAGLYWTW--- 74

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
                   N++ +++ +  L  L S M GYAL+  DFKGR    + ++++   P   L++
Sbjct: 75  ------FGNSVWISIVIVVLSLLFSSMVGYALAVYDFKGRNFFFLLVLIILMIPFEILML 128

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
            ++ L       +  LV  Y+ + +     A+  P++V+  + +   +P E   +  IDG
Sbjct: 129 PLFQLMI-----KLQLVNTYTAVIL----PAIVAPIAVFFFRQYALGLPKELMDAARIDG 179

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIEANIEAE 250
            +   ++ KIMLPL+ P + A+A+   L  W + ++    L      TL   +   +   
Sbjct: 180 CTEYGIFFKIMLPLMGPSLAAMAILQGLNSWNNFLWPLVVLRSNDMFTLPIGLATLLTPY 239

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
             +  ++ A   + ++P +I F+  Q+  + G + GG+KG
Sbjct: 240 GNNYDILLAGSVMTIVPIVILFIFFQRYFIAGLTVGGVKG 279


>dbj|BAB07401.1| (AP001519) sugar ABC transporter (permease) [Bacillus halodurans]
           Length = 293
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 52/220 (23%), Positives = 107/220 (48%), Gaps = 13/220 (5%)

Query: 75  NMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVG 134
           N+    LN++IV      L  L++    +AL+RM +K  K+++   M+    P  + ++ 
Sbjct: 82  NIGLYFLNSVIVTGSAVILTVLLASFVTFALTRMRWKLSKLVLGLFMVGLMIPVHSTLIP 141

Query: 135 VYLLY-RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDG 193
           ++  +  +     P        + +I    A  +P+++ ++ GF+ T+P E E + I+DG
Sbjct: 142 LFNFFLNVGLMDHP--------LAIILTYTAFNLPLTIMILLGFYYTLPRELEEAAIMDG 193

Query: 194 ASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLID---QTLATFIEANIEAE 250
            S   ++ +I+LP+  P +   A+ + +  W + ++V TF+     +TL   I+  I   
Sbjct: 194 CSIHRLFFQIILPMTAPVVATTAIINMIYNWNEFVFVNTFISSDKYKTLTVGIQNFIGQY 253

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGY-SGGIKG 289
            T    I A   + +LP ++ F+     ++ G  +G +KG
Sbjct: 254 STDWGAIGATLVISILPILLAFIFLSNRIVEGITAGSVKG 293


>pir||E75187 sugar abc transporter, permease protein PAB2335 - Pyrococcus abyssi
           (strain Orsay) >gi|5457457|emb|CAB48948.1| (AJ248283)
           SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus
           abyssi]
           Length = 277
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 55/205 (26%), Positives = 100/205 (47%), Gaps = 11/205 (5%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           I N++IVA+    +  L+ + +GYA++R  FKG+  + +S++ L  FP   + + + +LY
Sbjct: 72  IKNSIIVAVLTIIISFLLGIPAGYAIARYVFKGKDTIKLSIVALRMFPIPVMAIPLVVLY 131

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                    L  + + + V  A  A+ +P  V +    F  V  E E +G++ G +R   
Sbjct: 132 I-------KLNLIDTLLGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGA 184

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF-LIDQTLAT---FIEANIEAEYTHMP 255
           ++ I LPL  PG+ A A+F+F+  W ++       L ++TL      I A          
Sbjct: 185 FKSITLPLALPGLAAAAMFTFVMSWNEVFVASILTLKNRTLPAQILSIVAGAAGGAAPAY 244

Query: 256 MIAAAGTLYLLPTIIFFLTAQQLLL 280
              AA  + +LP ++F   A++ L+
Sbjct: 245 YKFAAAFIMILPAMLFIFFARRYLV 269


>emb|CAB87330.1| (AL163672) putative integral membrane transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 305
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 52/213 (24%), Positives = 105/213 (48%), Gaps = 12/213 (5%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFP-GVALIVGVYLL 138
           +LNT ++ +  + LV +I  ++GYA + M+F GR    ++++ L   P  VALI    L 
Sbjct: 101 LLNTALITVPATVLVVVIGALAGYAFAWMEFPGRDWWFLAVVGLLVVPVQVALIPIAELF 160

Query: 139 YRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRIT 198
            +I            S + VI       +P +V+L++ FF  +P E   +  +DGA  + 
Sbjct: 161 GKIGL--------FGSMLGVILFHVGFGLPFAVFLLRNFFAEIPRELLEAARLDGAGELR 212

Query: 199 VWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLI--DQTLATFIEANIEAEYTHMPM 256
           ++ ++++PL  P I ++ +F FL  W D++    F    +Q +   ++  +     ++ +
Sbjct: 213 LFVRVVMPLGGPAIASLGIFQFLWVWNDMLVALIFSDSGNQPITVALQTQVRQFGNNIDV 272

Query: 257 IAAAGTL-YLLPTIIFFLTAQQLLLRGYSGGIK 288
           +A    +  ++P  +FF   +Q +    +G +K
Sbjct: 273 LAPGAFISMVIPLAVFFAFQRQFVSGVMAGAVK 305


>pir||T03551 transmembrane maltose transport protein - Rhodobacter capsulatus
           >gi|3128352|gb|AAC16204.1| (AF010496) transmembrane
           maltose transport protein [Rhodobacter capsulatus]
           Length = 276
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 48/207 (23%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           N+++++LG + L  L+++ + +A++ +     K L++ ++     P V ++V +YL++R 
Sbjct: 74  NSVVISLGSTLLALLVAIPAAWAMAFVPGPKTKDLLMWMLSTKMMPAVGVLVPIYLIFR- 132

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
                  L  L S I ++     + +P+ +W++  +F  +P E   +  +DGA+      
Sbjct: 133 ------DLGLLDSRIGLVVVLMLMNLPIVIWMLYTYFREIPGEILEAARMDGATLKDELI 186

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQT--LATFIEANIEAEYTHMPMIAA 259
            ++ P+  PGI +  L + +  W +  +       +   L TFI      E      ++A
Sbjct: 187 HVLTPMAVPGIASTLLLNVILAWNEAFWTLQLTTSKAAPLTTFIAGYSSPEGLFYAKLSA 246

Query: 260 AGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           A TL + P +I    +Q+ L+RG + G
Sbjct: 247 ASTLAIAPILILGWFSQKQLVRGLTFG 273


>emb|CAC11827.1| (AL445065) probable sugar ABC transporter, permease protein
           [Thermoplasma acidophilum]
           Length = 291
           
 Score = 75.3 bits (182), Expect = 8e-13
 Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 29/283 (10%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNF--DFSQFHLTLENWINVFQGKLAITG 70
           L+ +++I LA + L+  F   ++ +F  ++  NF  + + F  T    I+ F   L    
Sbjct: 22  LIYVVSILLAIVYLV-PFYWTVIKAFRDSIFANFPPNMNPFSQTS---ISYFIVNLRTVW 77

Query: 71  GVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLM--LLHAFPG 128
           G   +      N++ V++ V      + +++GYA +R+ F GR  +  +++  L+  FP 
Sbjct: 78  GFG-DFPLWYFNSVFVSICVVAGSVFVGMLAGYAFARLKFPGRDYMFYAVLATLMIPFPV 136

Query: 129 VALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWS 188
           +++   V++L       + + +  Y  + +    +AL+V    ++M+ +F T+P E E +
Sbjct: 137 ISIASYVFML-------DLNWLSTYQGLILPQIASALDV----FIMRQYFLTIPEEVELA 185

Query: 189 GIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIY-------VRTFLIDQTLAT 241
             IDG     ++ ++  P+ KP I A  +FSF+  W + ++       +  F +   L  
Sbjct: 186 AKIDGMKPWQIFFRVSAPMAKPAIAAATIFSFIGSWNNFLWPLMEVHSLNMFTLPLVLNF 245

Query: 242 FIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS 284
           F  AN    Y +  M      L ++PTI+ F+  ++  + G S
Sbjct: 246 FKGANGTQIYWNQMM--TVNILTMIPTIVIFVVFEKYFISGIS 286


>emb|CAA61936.1| (X89810) putative integral protein [Bacillus subtilis]
           Length = 281
           
 Score = 74.9 bits (181), Expect = 1e-12
 Identities = 69/286 (24%), Positives = 129/286 (44%), Gaps = 28/286 (9%)

Query: 15  LILAIFLATLPLIIGF-------GLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLA 67
           + L +F   L L+  F       G L  SS    +  N D     ++ +N+  +F G   
Sbjct: 13  IALTLFFMMLSLLYLFPIFCLLLGSLKPSSELLRVGLNLDIDPKVMSFDNYTFLFNG--- 69

Query: 68  ITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFP 127
             G +         N+L++ L  + L    S M GY L+  DFKGR I+ V ++++   P
Sbjct: 70  --GSIYFKW---FFNSLVLGLFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVP 124

Query: 128 GVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEW 187
              L V +  L++++      L+  Y+ + + F    +  P++V+  + +   +P +   
Sbjct: 125 ---LEVMMLPLFKLTVGLH--LIDSYTGVILPF----IVSPVAVFFFRQYALGLPRDLLD 175

Query: 188 SGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIE 244
           S  +DG +   ++ +IM PL+KP   A+ +   L  W + ++    L  +   TL   + 
Sbjct: 176 SARMDGCTEFGIFFRIMAPLMKPAFGAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLS 235

Query: 245 ANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
           + +     +  M+ +     +LP II FL  Q+  + G + GG+KG
Sbjct: 236 SLLSPYGNNYDMLISGSVFAILPVIIIFLFFQKYFISGLTVGGVKG 281


>pir||D71220 probable sugar transport membrane protein - Pyrococcus horikoshii
           >gi|3256408|dbj|BAA29091.1| (AP000001) 277aa long
           hypothetical sugar transport membrane protein
           [Pyrococcus horikoshii]
           Length = 277
           
 Score = 74.9 bits (181), Expect = 1e-12
 Identities = 55/205 (26%), Positives = 97/205 (46%), Gaps = 11/205 (5%)

Query: 80  ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLY 139
           I N++IVA     +  ++ + +GYA++R  FKG+  + +S++ L  FP   + + + +LY
Sbjct: 72  IKNSVIVATLTIIISFILGIPAGYAIARFAFKGKDTIKLSIVALRMFPIPVMAIPLVVLY 131

Query: 140 RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITV 199
                    L  + +   V  A  A+ +P  V +    F  V  E E +G++ G +R   
Sbjct: 132 I-------KLKLIDTLFGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGA 184

Query: 200 WRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTF-LIDQTLAT---FIEANIEAEYTHMP 255
           +R I LPL  PG+ A A+F+F+  W ++       L ++TL      I A          
Sbjct: 185 FRNITLPLALPGLAAAAMFTFVMSWNEVFVASILTLKNRTLPAQILSIVAGAAGGAAPAY 244

Query: 256 MIAAAGTLYLLPTIIFFLTAQQLLL 280
              AA  +  LP ++F   A++ L+
Sbjct: 245 YKFAAAFIMTLPAMLFIFFARRYLV 269


>pir||A56641 probable membrane transport protein - Clostridium perfringens
           >gi|296356|emb|CAA46887.1| (X66092) putative membrane
           transport protein [Clostridium perfringens]
           Length = 275
           
 Score = 74.5 bits (180), Expect = 1e-12
 Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 14/209 (6%)

Query: 78  RIILNTLIVAL-GVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVY 136
           +  +NT+I+ +  V G V   S M+ YA +R++F G+KI    ++     P    IV  +
Sbjct: 69  KFYMNTIIMLIFRVVGSV-FFSAMAAYAFARLNFPGKKIFFALVLFQMMIPAQIFIVPQF 127

Query: 137 LLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASR 196
           LL      Q+  L+   S + +      +      +L++ FF  +P E E +  +DG + 
Sbjct: 128 LLV-----QKLGLLNTISALVI----PGIVSAFGTFLLRQFFMGLPKELEEAAKLDGCNT 178

Query: 197 ITVWRKIMLPLIKPGILAVALFSFLAGWQDIIY--VRTFLIDQTLATFIEANIEAEY-TH 253
              + K+MLPL + G++A+ +F+ L  ++D+++  V    +D+   +   A+++ ++ T+
Sbjct: 179 WQTFYKVMLPLARSGLVALGIFTALFAFKDLMWPLVVNMSVDKMTLSAGLASLQGQFSTN 238

Query: 254 MPMIAAAGTLYLLPTIIFFLTAQQLLLRG 282
            P + A   L + P +I F+  Q+  + G
Sbjct: 239 YPQLMAGSVLAIWPMLIIFVIFQRKFIEG 267


>gb|AAC45768.1| (AF018073) sorbitol/mannitol transport inner membrane protein; SmoG
           [Rhodobacter sphaeroides]
           Length = 276
           
 Score = 74.5 bits (180), Expect = 1e-12
 Identities = 47/216 (21%), Positives = 106/216 (48%), Gaps = 9/216 (4%)

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
           R N AR  +N+++++LG + +   I++ + +A++ +  +  K +++ ++     P V ++
Sbjct: 65  RSNYARHFMNSVVISLGSTLVALAIAIPAAWAMAFVPGRRTKDVLMWMLSTKMMPAVGVL 124

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           + +YL++R           L + I ++     + +P+ VW++  +F  +P E   +  +D
Sbjct: 125 IPLYLIFR-------DTGLLDTRIGLVIVLTLINLPIVVWMLYTYFKEIPGEILEAARMD 177

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQT--LATFIEANIEAE 250
           GA+  +    I+ P+  PGI +  L + +  W +  +       +   L  FI +    E
Sbjct: 178 GATLGSEILYILTPMAVPGIASTLLLNVILAWNEAFWTLQLTTSRAAPLTQFIASYSSPE 237

Query: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
                 ++AA T+ + P +I    +Q+ L+RG + G
Sbjct: 238 GLFYAKLSAASTMAIAPILILGWFSQKQLVRGLTFG 273


>sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE
           PROTEIN AMYC >gi|481066|pir||S37705 amyC protein -
           Thermoanaerobacterium thermosulfurigenes
           >gi|565384|gb|AAB00844.1| (M57692) membrane protein for
           maltose transport [Thermoanaerobacterium
           thermosulfurigenes] >gi|228283|prf||1802282B sugar
           transport protein [Thermoanaerobacterium
           thermosulfurigenes]
           Length = 274
           
 Score = 74.1 bits (179), Expect = 2e-12
 Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 27/281 (9%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNM--ITNFDFSQFHLTLENWINVFQGKLAITG 70
           L+  L I L+ L  I  F +++++SF T +   TN       L L+N+          T 
Sbjct: 10  LLTFLGIVLSLL-WISPFYIILVNSFKTKLELFTNTLSLPKSLMLDNYK---------TA 59

Query: 71  GVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVA 130
              +N++    NTLI+ +    ++ + S M+ YAL R+  K   I+ +   +    P  +
Sbjct: 60  AANLNLSEAFSNTLIITVFSILIIAIFSSMTAYALQRVKRKSSVIIYMIFTVAMLIPFQS 119

Query: 131 LIVGVYLLY-RISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSG 189
           +++ +   + +  F     LV    F+Y+ F  +     + V+L  G    +P   + + 
Sbjct: 120 VMIPLVAEFGKFHFLTRSGLV----FMYLGFGSS-----LGVFLYYGALKGIPTSLDEAA 170

Query: 190 IIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANI-- 247
           +IDG SR  ++  I+LPL+ P  + +A+   +  W D + + + +I++  +  +   I  
Sbjct: 171 LIDGCSRFRIYWNIILPLLNPTTITLAVLDIMWIWNDYL-LPSLVINKVGSRTLPLMIFY 229

Query: 248 -EAEYTHMPMIAAAG-TLYLLPTIIFFLTAQQLLLRGYSGG 286
             ++YT    +  AG T+ +LP +IF+  AQ+ L+     G
Sbjct: 230 FFSQYTKQWNLGMAGLTIAILPVVIFYFLAQRKLVTAIIAG 270


>gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus]
           Length = 267
           
 Score = 73.7 bits (178), Expect = 2e-12
 Identities = 58/243 (23%), Positives = 111/243 (44%), Gaps = 28/243 (11%)

Query: 53  LTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKG 112
           LTL N +   QG   I   ++      ++  + +AL +          +GY LSR+    
Sbjct: 47  LTLNNLLTALQGTAFIDPFIKSLETATLVGIITIALAIP---------AGYGLSRLPRAI 97

Query: 113 RKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVI---FARAALEVPM 169
              +I+ L++ +  P  A+++G+ +            ++L+ F  V+    A+  + +P+
Sbjct: 98  AYSIIILLLVTNMMP--AIVIGIPIAV--------DFLKLHLFESVVGLALAQTLITLPL 147

Query: 170 SVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIY 229
           + ++++G F ++P + E    +DGA+       ++LPL  PGI A  L S++  W +  Y
Sbjct: 148 ATFILQGTFSSIPIDLEHQARVDGANLFNRLFSVLLPLAAPGIAAAFLISWMFSWDEFTY 207

Query: 230 VRTFLIDQTLATFIEANIEAEYTHMPMIA--AAGTLYLLPTIIFFLTAQQLLLRGY-SGG 286
               +      + +   I  + T   ++A  A   ++ LP II     Q+ L   Y +GG
Sbjct: 208 AILLI---PYHSTLPVTIYQDVTRGNLLAGIAFSLIFTLPVIILTFALQKYLRGEYLAGG 264

Query: 287 IKG 289
           IKG
Sbjct: 265 IKG 267


>pir||C69588 L-arabinose transport (integral membrane protein) araQ - Bacillus
           subtilis >gi|1770021|emb|CAA99594.1| (Z75208)
           hypothetical protein [Bacillus subtilis]
           >gi|2635338|emb|CAB14833.1| (Z99118) integral membrane
           protein [Bacillus subtilis]
           Length = 281
           
 Score = 73.7 bits (178), Expect = 2e-12
 Identities = 69/286 (24%), Positives = 126/286 (43%), Gaps = 28/286 (9%)

Query: 15  LILAIFLATLPLIIGF-------GLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLA 67
           + L +F   L L+  F       G L  SS    +  N D     ++ +N+  +F G   
Sbjct: 13  IALTLFFMMLSLLYLFPIFCLLLGSLKPSSELLRVGLNLDIDPKVMSFDNYTFLFNG--- 69

Query: 68  ITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFP 127
             G +         N+L++ L  + L    S M GY L+  DFKGR I+ V ++++   P
Sbjct: 70  --GSIYFKW---FFNSLVLGLFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVP 124

Query: 128 GVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEW 187
              +++ ++ L          L  + S+  VI    A   P++V+  + +   +P +   
Sbjct: 125 LEVMMLPLFKL-------TVGLHLIDSYTGVILPLIA--SPVAVFFFRQYALGLPRDLLD 175

Query: 188 SGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---TLATFIE 244
           S  +DG +   ++ +IM PL+KP   A+ +   L  W + ++    L  +   TL   + 
Sbjct: 176 SARMDGCTEFGIFFRIMAPLMKPAFGAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLS 235

Query: 245 ANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIKG 289
           + +     +  M+ +     +LP II FL  Q+  + G + GG+KG
Sbjct: 236 SLLSPYGNNYDMLISGSVFAILPVIIIFLFFQKYFISGLTVGGVKG 281


>emb|CAB61916.1| (AL133278) putative transport system permease protein [Streptomyces
           coelicolor A3(2)]
           Length = 306
           
 Score = 73.4 bits (177), Expect = 3e-12
 Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 27/290 (9%)

Query: 9   RRGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNF-----DFSQFHLTLENWINVFQ 63
           R  ELVL   + L  L L IG  L  LS+       +       F     TL N+  V  
Sbjct: 35  RGWELVLRYLLLLGVLALTIGPFLWQLSTSLKGPTEDIFSSPPKFLPSDPTLHNYERVAD 94

Query: 64  GKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLL 123
                     + +    LN+L VA        + + ++GYAL+R+ ++GR++  +  +L 
Sbjct: 95  ---------TIPVWDYALNSLKVAAANVVTNCVGAALAGYALARLRYRGRRVATLVFILA 145

Query: 124 HAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPW 183
              P   +I+  +   R     E  L      + +    +AL    +V LM+  F  +P+
Sbjct: 146 MLVPVEGIIIAQFTTMR-----ELGLNNTLVGVVLPGCVSAL----NVLLMRNAFLNLPY 196

Query: 184 EFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF- 242
           E E +  +DGA+    + +I LP +K  +  VA+F+F+  W D ++    L D +  T  
Sbjct: 197 EIEEAAFVDGANVWQRFLRIALPAVKGTLAVVAIFAFMGAWDDFLWPLIVLSDPSRFTLT 256

Query: 243 IEAN-IEAEYTHMPMIAAAGTLY-LLPTIIFFLTAQQLLLRGY-SGGIKG 289
           I  N +   + +   + AAGT+  + P I+ F   Q+   RG   G +KG
Sbjct: 257 IGLNYLHGTFANDERLVAAGTIIAVAPLIVLFACLQRYFFRGVGEGAVKG 306


>sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESQ
           >gi|7442793|pir||H69796 lactose permease homolog yesQ -
           Bacillus subtilis >gi|2633012|emb|CAB12518.1| (Z99107)
           similar to lactose permease [Bacillus subtilis]
           Length = 296
           
 Score = 73.0 bits (176), Expect = 4e-12
 Identities = 68/279 (24%), Positives = 126/279 (44%), Gaps = 23/279 (8%)

Query: 15  LILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWI--NVFQGKLAITGGV 72
           ++  +F ATL +++ + ++ L   S     +   +   L  + +I  N  +G   I G  
Sbjct: 27  ILFHVFTATLAVLLLYPVIWLFVSSFKESASIFTTSHSLIPDPFILSNYAEGWKGIAG-- 84

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
           +  +  I  + +IV L   G V + S +  Y  +R+ FKG+K     +M     P   L+
Sbjct: 85  QPFLTFIKNSAIIVGLSTIGAV-MSSAVIAYGFARIPFKGKKFWFACMMGTLMLPHEVLM 143

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           +  Y+++         L  L SF  ++  +        ++LM  F  T+P E + +  ID
Sbjct: 144 IPQYIMFA-------KLDWLNSFKPIVVPQFFGHA-FFIFLMIQFIRTIPEELDEAARID 195

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFL-------IDQTLATFIEA 245
           G  R   + +I+LPLI P +   A+FSF   W+++I    +L       +   L  F++ 
Sbjct: 196 GCGRFACFWRIILPLIAPALATSAIFSFYWKWEELIQPLLYLNKPELYPVSLALKLFLDT 255

Query: 246 NIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS 284
              + +  M  ++A     LLP I+ F   Q+ +++G S
Sbjct: 256 ESASNWGAMFAMSAVS---LLPVILVFFLFQKYIVQGIS 291


>dbj|BAB07566.1| (AP001520) ABC transporter (permease) [Bacillus halodurans]
           Length = 273
           
 Score = 73.0 bits (176), Expect = 4e-12
 Identities = 52/218 (23%), Positives = 103/218 (46%), Gaps = 12/218 (5%)

Query: 76  MARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGV 135
           +A  +LNTL + +  + L  L+  ++GY LS+  FKG   +  +++     P  ++++ +
Sbjct: 64  LAPNLLNTLYLVIPATILSALLGSLNGYVLSKWKFKGADWIFTAILFGMFIPYQSILIPL 123

Query: 136 YLLYRISFSQEPSLVRLYSFIY-VIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGA 194
                I F +E   V LY+ I  +I       +P++  + + F+  +P E   S  +DGA
Sbjct: 124 -----IQFLRE---VNLYNTIPGLILVHVVYGIPITTLMFRNFYANIPKEMLESAQVDGA 175

Query: 195 SRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYV--RTFLIDQTLATFIEANIEAEYT 252
               ++R IM PL   G + V ++ F   W + ++    T    Q +   ++    ++  
Sbjct: 176 GFFRIYRHIMFPLSITGFVVVGIWQFTNIWNEFLFAVSITTTSQQPVMVALQNLSGSQIV 235

Query: 253 HMPMIAAAGTLYLLPTIIFFLTAQQLLLRG-YSGGIKG 289
              +  A   L  LPT++ ++   +  +RG  +G +KG
Sbjct: 236 QWNVQMAGALLAALPTLLVYIILGKYFVRGLLAGSVKG 273


>emb|CAA91218.1| (Z56279) integral membrane protein [Thermoanaerobacter brockii]
           Length = 280
           
 Score = 72.2 bits (174), Expect = 7e-12
 Identities = 59/214 (27%), Positives = 110/214 (50%), Gaps = 17/214 (7%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           + LI+   LA LP+ +   LL+ ++ ST  I      Q  ++L    N++     +TG +
Sbjct: 16  IFLIILFLLAILPIWL---LLVNATRSTPEI------QQGVSLLPSSNLWVNWNHLTG-M 65

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
            VN+ R  LN+LI+++ V+ L    S+M+ YA+   DFK +K+L  +++LL        I
Sbjct: 66  GVNIWRGFLNSLIISVPVTFLTVYFSMMTAYAIHVYDFKWKKMLYNTVVLL-------TI 118

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           V   L+  I F +  + ++L +    +   A    PM  + ++    T+  +   +  I+
Sbjct: 119 VPTQLVPIIGFYKYMASLKLLNSYIPLIVPAIASPPMVFFALQYLESTIVKDLIEAARIE 178

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQD 226
           G+  + ++ KI+LP+ KPG   + + SF+A W +
Sbjct: 179 GSGELGIFHKIILPIAKPGAFTMGILSFVASWNN 212


>emb|CAB61179.1| (AL132973) putative binding protein dependent transport protein.
           [Streptomyces coelicolor A3(2)]
           Length = 287
           
 Score = 72.2 bits (174), Expect = 7e-12
 Identities = 70/282 (24%), Positives = 127/282 (44%), Gaps = 31/282 (10%)

Query: 14  VLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGVR 73
           V +L   L  L L++       + FS+++++  DFS     L+N  ++F    A+ GG+ 
Sbjct: 25  VSVLYTLLPVLWLVLASTKNRDALFSSDLLSLSDFS----LLQNLKDLF----AMDGGL- 75

Query: 74  VNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIV 133
               R  +N+L+ A+  + +  L+SV  GYA  +  F+ ++ L   ++     P   L +
Sbjct: 76  --YGRWYVNSLLYAVIGAAVGALVSVACGYAFDKYRFRHKEKLFGLVLAAVMVPQTVLAL 133

Query: 134 GVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFF-DTVPWEFEWSGIID 192
            +YL+     + E  LV  +  +++      L  P  V+L + F    VP E   +  +D
Sbjct: 134 PLYLM-----ASEAGLVNTFWAVFI----PVLFNPFGVYLGRIFARGYVPDEVLEAARVD 184

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATF--------IE 244
           GA  +T + ++   ++ PG++ V LF   A W +       L DQ L             
Sbjct: 185 GAGELTTYARVAFRMLGPGLITVFLFQLTAIWNNFFLPMVMLSDQDLYPVSLGLYQWNSS 244

Query: 245 ANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
           A++  EY   P++     L +LP I+ F+  Q+    G + G
Sbjct: 245 ASVSPEY--YPVVIMGSLLAVLPLILAFVLLQRFWRSGLTAG 284


>emb|CAC11275.1| (AL445063) inner membrane protein of trehalose/maltose (MalG)
           related protein [Thermoplasma acidophilum]
           Length = 294
           
 Score = 71.8 bits (173), Expect = 9e-12
 Identities = 47/210 (22%), Positives = 100/210 (47%), Gaps = 17/210 (8%)

Query: 82  NTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRI 141
           NTLI     + +    ++++G  ++R +  G+K ++  +++L  FP V +++ +Y ++  
Sbjct: 90  NTLIFCTASTAIGIAFAIIAGIGMARFNIPGKKAILYMMLILTMFPFVVMVIPLYFMFAT 149

Query: 142 SFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWR 201
                  L+  Y  + + +   AL    S WL+  + +++P ++E +  +DG ++     
Sbjct: 150 LH-----LIDTYQGLILAYTGGALIY--SSWLIMNYVNSLPKDYEEAAQLDGLTQSQALF 202

Query: 202 KIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLATFIEANIEAEYT-------HM 254
           +I++P+ +P I+   L +F+  + D      F+   ++ T     I   YT       + 
Sbjct: 203 RILVPMSRPVIIFAVLVAFMGPYTDYALAGQFITTPSMYTLA---IGLYYTSTGTVVMNY 259

Query: 255 PMIAAAGTLYLLPTIIFFLTAQQLLLRGYS 284
            + AA   L  LP  I F   Q+ L+ G+S
Sbjct: 260 NVYAAFSVLMGLPLFILFFVFQKYLVSGFS 289


>emb|CAB55534.1| (AL117322) putative binding-protein-dependent transport protein
           [Streptomyces coelicolor A3(2)]
           Length = 296
           
 Score = 71.4 bits (172), Expect = 1e-11
 Identities = 55/237 (23%), Positives = 117/237 (49%), Gaps = 26/237 (10%)

Query: 52  HLTLENWINVF------QGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYAL 105
           H T+ N++ V       +   A   G +V+  R +LN+++ +  ++ L TL   M+GYA 
Sbjct: 55  HPTMINFLRVLGLTSQEEAVAAGGSGAQVDFLRYLLNSVVYSGLIAVLQTLFCAMAGYAF 114

Query: 106 SRMDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAAL 165
           +R+ F GR ++   L+     P +  ++  ++L +        L  L +F+ ++ A + L
Sbjct: 115 ARLRFPGRDLVFGVLIAALMVPPIFTVLPNFVLVK-------DLGWLNTFVGMV-APSVL 166

Query: 166 EVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQ 225
             P +V+ ++ FF +VP E E + I+DG     ++ ++++P+ +  +L V L + +  W+
Sbjct: 167 MTPFAVFFLRQFFLSVPREVEEAAILDGVGPWGIFWRVVMPMTRGPLLTVGLTTTVWAWK 226

Query: 226 DIIY-------VRTFLIDQTLATFIE--ANIEAEYTHMPMIAAAGTLYLLPTIIFFL 273
           D ++         T ++   L  F +   N + ++T    + A   L +LP ++  +
Sbjct: 227 DYLWPLLSGRDEETRVLTVALGIFQQQSPNTQPDWTG---LMAGSALSVLPVLVLLI 280


>gb|AAF43782.1|AF135015_1 (AF135015) putative integral membrane protein [Thermoanaerobacter
           ethanolicus]
           Length = 280
           
 Score = 71.0 bits (171), Expect = 2e-11
 Identities = 59/214 (27%), Positives = 109/214 (50%), Gaps = 17/214 (7%)

Query: 13  LVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAITGGV 72
           + LI+   LA LP+ +   LL+ ++ ST  I      Q  ++L    N++     +TG +
Sbjct: 16  IFLIILFLLAILPIWL---LLVNATRSTPEI------QQGVSLLPSSNLWVNWNHLTG-M 65

Query: 73  RVNMARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI 132
            VN+ R  LN+LI+++ V+ L    S+M+ YA+   DFK +K+L  +++LL        I
Sbjct: 66  GVNIWRGFLNSLIISVPVTFLTVYFSMMTAYAIHVYDFKWKKMLYNTVVLL-------TI 118

Query: 133 VGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGIID 192
           V   L+  I F +  + ++L +    +   A    PM    ++    T+  +   +  I+
Sbjct: 119 VPTQLVPIIGFYKYMASLKLLNSYIPLIVPAIASPPMVFLALQYLESTIVKDLIEAARIE 178

Query: 193 GASRITVWRKIMLPLIKPGILAVALFSFLAGWQD 226
           G+  + ++ KI+LP+ KPG   + + SF+A W +
Sbjct: 179 GSGELGIFHKIILPIAKPGAFTMGILSFVASWNN 212


>emb|CAB95282.1| (AL359779) putative sugar transport integral membrane protein
           [Streptomyces coelicolor A3(2)]
           Length = 297
           
 Score = 71.0 bits (171), Expect = 2e-11
 Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 31/255 (12%)

Query: 48  FSQFHLTLENWINVFQGKLAITGGVRVNMARIILNTLIVALGVSGLVTLISVMSGYALSR 107
           FS    TL+N+  +F      TG V         NT++V      +      ++GYA ++
Sbjct: 61  FSLGSATLDNYRAMFDDVPIGTGFV---------NTVLVVAVKGAMTMFFCPLAGYAFAK 111

Query: 108 MDFKGRKILIVSLMLLHAFPGVALIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEV 167
             F G+ +L   LML    P + L++ + L        E S +   +    +    +++ 
Sbjct: 112 YRFPGKNLLFGVLMLTLMLPTLVLVIPLLL--------EMSQLGWVNTYQALILPGSIDA 163

Query: 168 PMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDI 227
             S++ M+     VP E   +G +DGAS   ++ +I++P+I+PGI A+ + + +  + D 
Sbjct: 164 -FSIFWMRQTIAAVPDELLDAGRVDGASEFGIFARIVMPVIRPGIAALGVLTAMNIYNDF 222

Query: 228 IYVRTFLIDQ----------TLATFIEAN-IEAEY-THMPMIAAAGTLYLLPTIIFFLTA 275
           ++    + D+          TLA  +  N + A++ T    + AAG++ +LP +  F+  
Sbjct: 223 VWPVVAVNDESHQTLQVVLSTLAQNVTGNRVGADFATVWGELLAAGSIAMLPVLALFVLL 282

Query: 276 QQLLLRG-YSGGIKG 289
           Q+  + G  +G +KG
Sbjct: 283 QRHFINGILAGSVKG 297


>pir||T30595 sugar transport homolog - Amycolatopsis orientalis
           >gi|2894178|emb|CAA11785.1| (AJ223998) PCZA361.28
           [Amycolatopsis orientalis]
           Length = 132
           
 Score = 69.1 bits (166), Expect = 6e-11
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 6/130 (4%)

Query: 166 EVPMSVWLMKGFFDTVPWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQ 225
           ++P ++++M+  F+ VP E + + ++DG   + V   ++LP + PG++ V LF+FLA W 
Sbjct: 3   QLPFALFMMRNSFEAVPRELDEAALVDGCGPLRVLWSVLLPAVVPGMVTVGLFAFLASWN 62

Query: 226 DIIYVRTFLIDQ---TLATFIEANIEAEYTHMP--MIAAAGTLYLLPTIIFFLTAQQLLL 280
           + I    FL D    TL T + A     +  +    + A   +  +P +I F+  Q+  +
Sbjct: 63  EFIAPLIFLSDGDKFTLPTALAAMRSGNFGAIDYGALQAGIVVSAIPCMILFMLLQRHYV 122

Query: 281 RGY-SGGIKG 289
           RG+ SG +KG
Sbjct: 123 RGFSSGALKG 132


>sp|O58967|YC16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1216
           >gi|7442814|pir||B71065 hypothetical protein PH1216 -
           Pyrococcus horikoshii >gi|3257633|dbj|BAA30316.1|
           (AP000005) 275aa long hypothetical protein [Pyrococcus
           horikoshii]
           Length = 275
           
 Score = 69.1 bits (166), Expect = 6e-11
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 20/223 (8%)

Query: 76  MARIILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVALI-VG 134
           + R ILN+LI     +   T++  ++G+ ++++  +GR    VS  LL      ALI  G
Sbjct: 64  LKRPILNSLIFTTFATIFSTILGSIAGFTIAKL-VRGR----VSRQLL------ALISFG 112

Query: 135 VYLLYR---ISFSQEPSLVRLYSFIY-VIFARAALEVPMSVWLMKGFFDTVPWEFEWSGI 190
           ++L Y+   I   +  S + LY+ I  +I    A  +P++  L   ++  +P E   +  
Sbjct: 113 IFLPYQSILIPLVKIISSLGLYNRILGLILTHTAYGIPITTLLFTNYYYEIPDELVEAAK 172

Query: 191 IDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIY--VRTFLIDQTLATFIEANIE 248
           IDGA    ++ K++LPL K   +   ++ F   W D ++  V T   +   AT   AN++
Sbjct: 173 IDGADPWKIYTKVILPLSKAPFVVTGIYQFTNIWNDYLFGVVLTRGEEAMPATVKLANLK 232

Query: 249 AEYTHMPMIAAAGTLYL-LPTIIFFLTAQQLLLRGY-SGGIKG 289
             +     I  AG L + LPT++  +   + L+RGY SG +KG
Sbjct: 233 GSFVANWNIQMAGALIVALPTLLIMIALGKYLIRGYTSGALKG 275


>gb|AAD33666.1|AF135398_3 (AF135398) putative integral membrane protein [Thermus brockianus]
           Length = 276
           
 Score = 69.1 bits (166), Expect = 6e-11
 Identities = 54/219 (24%), Positives = 102/219 (45%), Gaps = 19/219 (8%)

Query: 75  NMARIILNTLIVALGVSGLVTL----ISVMSGYALSRMDFKGRKILIVSLMLLHAFPGVA 130
           N  R +LN+++V    SGL TL    +S M+GYAL+   F+ + ++   ++     P   
Sbjct: 66  NFLRALLNSVVV----SGLYTLGGLLLSAMAGYALAVYQFRFKALVFSFIVATLTIPYFV 121

Query: 131 LIVGVYLLYRISFSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTVPWEFEWSGI 190
           +++  Y+L     +++  L   +  + + F   AL     V+ M+  F ++P     +  
Sbjct: 122 VVIPQYILV----ARDLKLTNTFWGVILPFLANAL----GVFYMRQVFLSLPSSLLDAAR 173

Query: 191 IDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQTLAT---FIEANI 247
           +DGA  + ++ +I LPL++P + A+AL  FL  W D ++    L  + + T    +   I
Sbjct: 174 VDGAGEVRIFFQIALPLVRPALAALALILFLNAWNDYLWPLLVLSQKEMYTAPVALGTLI 233

Query: 248 EAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYSGG 286
                    I     L  +P ++ FL  Q+  + G + G
Sbjct: 234 GLTRVSWGGIMVGSALMTVPFLLLFLFLQRYFVAGITAG 272


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.331    0.145    0.432 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95259291
Number of Sequences: 2977
Number of extensions: 3593553
Number of successful extensions: 11685
Number of sequences better than 1.0e-10: 108
Number of HSP's better than  0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 11526
Number of HSP's gapped (non-prelim): 114
length of query: 289
length of database: 189,106,746
effective HSP length: 51
effective length of query: 238
effective length of database: 158,583,909
effective search space: 37742970342
effective search space used: 37742970342
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 165 (68.7 bits)