BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2232 (PAB2232) DE:SUGAR TRANSPORT ATP-BINDING PROTEIN.
(362 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 721 0.0
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 645 0.0
pir||F72510 probable multiple sugar-binding transport ATP-bindin... 394 e-109
pir||C71220 probable sugar-binding transport ATP-binding protein... 370 e-101
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 369 e-101
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 366 e-100
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 355 5e-97
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 354 1e-96
pir||B75207 multiple sugar-binding transport ATP-binding protein... 343 2e-93
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 341 8e-93
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 339 2e-92
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 334 1e-90
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 327 1e-88
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 325 5e-88
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 313 2e-84
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 312 4e-84
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 304 1e-81
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 303 2e-81
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 302 3e-81
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 292 4e-78
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 291 6e-78
dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens] 290 1e-77
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 289 4e-77
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 289 4e-77
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 288 6e-77
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 288 7e-77
pir||E83248 probable ATP-binding component of ABC transporter PA... 284 1e-75
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 282 6e-75
pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog ... 282 6e-75
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 279 3e-74
pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC... 277 1e-73
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 275 7e-73
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 274 1e-72
emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli] 273 2e-72
sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDIN... 273 2e-72
pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding pr... 273 3e-72
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 272 4e-72
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 272 4e-72
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 270 2e-71
emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [... 270 2e-71
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 270 2e-71
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 268 7e-71
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 268 9e-71
gi|10954682 probable mikimopine transporter gene~similar to potA... 266 3e-70
sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 266 3e-70
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >... 265 5e-70
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 265 6e-70
pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC... 265 8e-70
gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus] 264 1e-69
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 263 2e-69
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa... 263 3e-69
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 262 4e-69
pir||T03550 ATP-binding transport protein polk - Rhodobacter cap... 262 5e-69
pir||S05329 inner membrane protein malK - Salmonella typhimurium 262 5e-69
gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans] 261 7e-69
emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycob... 260 2e-68
pir||E70952 probable sugC protein - Mycobacterium tuberculosis (... 260 2e-68
pir||S63613 probable ATP-binding protein cymD - Klebsiella oxyto... 259 4e-68
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 258 6e-68
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens] 257 1e-67
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 257 1e-67
sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDI... 255 5e-67
pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protei... 255 5e-67
pir||E70943 probable ABC-type sugar transport protein - Mycobact... 253 2e-66
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 253 3e-66
gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other ... 253 3e-66
pir||T47062 hypothetical protein [imported] - Yersinia pestis >g... 252 5e-66
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti] 252 6e-66
sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 251 1e-65
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 251 1e-65
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 251 1e-65
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 250 2e-65
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 249 5e-65
pir||C83353 probable ATP-binding component of ABC maltose/mannit... 249 5e-65
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 248 7e-65
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 248 9e-65
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 247 1e-64
pir||T34595 ABC-transporter ATP-binding protein - Streptomyces c... 247 2e-64
pir||F71279 probable sugar ABC transporter, ATP-binding protein ... 246 3e-64
gi|11467821 probable transport protein [Nephroselmis olivacea] >... 246 3e-64
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 245 4e-64
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 245 4e-64
pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (... 245 8e-64
gi|7524830 sulfate transport system permease protein [Chlorella ... 245 8e-64
sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK ... 244 1e-63
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 244 1e-63
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 243 2e-63
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 243 2e-63
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 243 3e-63
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 242 5e-63
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 242 5e-63
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 242 7e-63
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 241 9e-63
sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROT... 240 1e-62
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 240 3e-62
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 239 3e-62
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 239 4e-62
gi|11466425 probable transport protein [Mesostigma viride] >gi|7... 239 4e-62
pir||B83571 probable ATP-binding component of ABC transporter PA... 239 4e-62
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 239 4e-62
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 237 1e-61
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 236 2e-61
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 236 2e-61
gb|AAB59057.1| (J01648) malK [Escherichia coli] 235 5e-61
pir||T36808 probable sugar transport system ATP-binding chain - ... 235 7e-61
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 235 9e-61
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 235 9e-61
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 234 1e-60
pir||A83621 probable ATP-binding component of ABC transporter PA... 233 2e-60
pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 ... 233 3e-60
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 233 3e-60
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 232 4e-60
pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [... 230 2e-59
gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens] 229 5e-59
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 227 1e-58
emb|CAC02745.1| (AL390114) probable sulfate transport ATP-bindin... 227 1e-58
pir||G83605 probable ATP-binding component of ABC transporter PA... 227 2e-58
sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 224 1e-57
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1... 224 2e-57
pir||T35802 probable polyamine ABC-transporter ATP-binding prote... 223 2e-57
gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas... 223 2e-57
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 221 8e-57
gb|AAA23639.1| (M32101) cysA [Escherichia coli] 221 1e-56
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 220 1e-56
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 219 5e-56
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 213 3e-54
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 212 5e-54
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 210 3e-53
pir||E75564 ABC transporter, ATP-binding protein - Deinococcus r... 209 4e-53
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 209 5e-53
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 203 4e-51
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 203 4e-51
gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter;... 202 5e-51
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 202 6e-51
gb|AAB01532.1| (U38418) ProV [Bacillus subtilis] 201 1e-50
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 200 2e-50
pir||T03479 probable ABC transporter ATP-binding protein - Rhodo... 200 2e-50
gb|AAF04258.1|AF139575_1 (AF139575) BusAA [Lactococcus lactis] 199 3e-50
gb|AAF40473.1|AF184955_1 (AF184955) OpuAA [Lactococcus lactis] 199 3e-50
gb|AAF37878.1|AF234619_1 (AF234619) OpuAA [Lactococcus lactis] 198 7e-50
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 198 9e-50
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 193 2e-48
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 189 6e-47
sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 183 2e-45
gi|11497712 sulfate ABC transporter, ATP-binding protein (cysA) ... 180 3e-44
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 178 7e-44
sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 177 1e-43
pir||D81435 probable iron-uptake ABC transport system ATP-bindin... 176 4e-43
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g... 173 4e-42
sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFU... 172 6e-42
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 168 1e-40
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 164 1e-39
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 157 1e-37
gb|AAA92009.1| (U37409) ABC multiple sugar transport protein [La... 157 2e-37
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 157 2e-37
sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TR... 155 7e-37
gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius] 153 2e-36
emb|CAC09552.1| (AL442120) putative ABC transport system ATP-bin... 153 4e-36
sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ... 152 8e-36
emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-b... 151 1e-35
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 149 5e-35
pir||G83358 probable ATP-binding component of ABC transporter PA... 148 7e-35
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 148 9e-35
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 147 2e-34
pir||C72289 oligopeptide ABC transporter, ATP-binding protein - ... 146 3e-34
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 146 3e-34
pir||H71718 probable ribonucleotide transport ATP-binding protei... 145 1e-33
emb|CAB89461.1| (AL354048) putative ABC transporter ATP-binding ... 144 2e-33
dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein)... 143 3e-33
emb|CAC05751.1| (AL391751) putative peptide transport system ATP... 142 7e-33
pir||E82932 spermidine/putrescine transport ATP-binding protein ... 141 2e-32
gi|11498246 nitrate ABC transporter, ATP-binding protein (nrtC-2... 140 3e-32
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 139 3e-32
pir||F64204 spermidine/putrescine transport ATP-binding protein ... 139 3e-32
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 139 3e-32
sp|P47288|POTA_MYCGE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 139 3e-32
pir||B82393 ABC transporter, ATP-binding protein VCA0977 [import... 139 3e-32
pir||D83281 histidine transport protein HisP PA2926 [imported] -... 139 3e-32
pir||G83214 probable ATP-binding component of ABC transporter PA... 139 5e-32
gb|AAK42946.1| ABC transporter, ATP binding protein (branched ch... 139 6e-32
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 138 8e-32
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 138 1e-31
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 136 3e-31
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 136 3e-31
pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC -... 136 4e-31
sp|P97027|SSUB_BACSU PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP... 135 7e-31
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 134 2e-30
sp|P75059|POTA_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 133 3e-30
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 132 8e-30
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 131 1e-29
pir||S74565 ABC-type transport protein slr0251 - Synechocystis s... 130 2e-29
gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-bindin... 130 3e-29
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING P... 130 3e-29
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR... 130 3e-29
pir||S16298 ferric enterobactin transport protein fepC - Escheri... 129 4e-29
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 129 4e-29
gb|AAG35385.1| (AF030414) ModC [Gluconacetobacter diazotrophicus] 129 4e-29
gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dp... 129 7e-29
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A... 127 2e-28
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 127 2e-28
pir||E72428 oligopeptide ABC transporter, ATP-binding protein - ... 127 2e-28
dbj|BAA75354.1| (AB011838) similar to B.subtilis ytsC gene(80%-i... 126 3e-28
pir||D75142 oligopeptide transport ATP-binding protein appf PAB0... 126 3e-28
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 126 4e-28
sp|P45289|SAPF_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 126 4e-28
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 126 4e-28
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 125 6e-28
emb|CAB92896.1| (AL356992) putative ABC-transporter ATP-binding ... 124 2e-27
pir||D83419 probable ATP-binding component of ABC transporter PA... 122 9e-27
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 118 1e-25
pir||C72424 oligopeptide ABC transporter, ATP-binding protein - ... 115 9e-25
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 115 1e-24
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 113 3e-24
pir||C82442 probable peptide ABC transporter, ATP-binding protei... 113 4e-24
dbj|BAB06041.1| (AP001515) sugar ABC transporter (ATP-binding pr... 112 7e-24
gi|10954710 hypothetical ABC-transporter gene~similar to moaD ge... 110 2e-23
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 101 1e-20
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 101 1e-20
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 97 4e-19
pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana... 97 4e-19
pir||F75032 rnase l inhibitor PAB0824 - Pyrococcus abyssi (strai... 85 9e-16
emb|CAA91229.1| (Z56283) orf1 [Lactobacillus helveticus] 85 1e-15
pir||G71136 probable transport protein - Pyrococcus horikoshii >... 82 8e-15
gb|AAC69557.2| (AF076529) ATP binding protein BviA [Butyrivibrio... 81 2e-14
gi|6320339 metal resistance protein, similar to multidrug resist... 70 3e-11
gb|AAA50353.1| (L35237) metal resistance protein [Saccharomyces ... 70 4e-11
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 721 bits (1841), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI
Sbjct: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM
Sbjct: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ
Sbjct: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN
Sbjct: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV
Sbjct: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
Query: 301 YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKALEFL 360
YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKALEFL
Sbjct: 301 YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKALEFL 360
Query: 361 NE 362
NE
Sbjct: 361 NE 362
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 645 bits (1646), Expect = 0.0
Identities = 313/359 (87%), Positives = 345/359 (95%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MV I+LENIVKKFGNF AL+NINL+IKDGEFMALLGPSGSGKSTLLYT+AGIYKPTSG+I
Sbjct: 1 MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YFDE+DVTELPPKDRN+GLVFQNWALYPHMTVYKNIAFPLELRKAP++EID+KVR+VAKM
Sbjct: 61 YFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKM 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
LHI+KLL+RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ
Sbjct: 121 LHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KELGITT+YVTHDQAEALAMADRIAVIREG+ILQVGTPDEVYYKP YKFVGGFLGNPPMN
Sbjct: 181 KELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMN 240
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
FVEA+VEDGKL+I+E + +P+PKQY +I++ + +VIIGFRPHDAE++KG EGIVGEV
Sbjct: 241 FVEAKVEDGKLVITEKSKLPIPKQYVEIVKETGITEVIIGFRPHDAEIVKGEGEGIVGEV 300
Query: 301 YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKALEF 359
YSFEPLGREQIVTVSVNDSIVKVFAPEGEHF+FGEKVTIK+KE +VLFDKK+EKALEF
Sbjct: 301 YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFSFGEKVTIKVKEELLVLFDKKTEKALEF 359
>pir||F72510 probable multiple sugar-binding transport ATP-binding protein
APE2060 - Aeropyrum pernix (strain K1)
>gi|5105758|dbj|BAA81070.1| (AP000063) 388aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 388
Score = 394 bits (1001), Expect = e-109
Identities = 210/363 (57%), Positives = 262/363 (71%), Gaps = 7/363 (1%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
++LE + K FGN +A+ ++NL I+D EF+++LGPSGSGK+TLLY +AGIYKP+ GRIYF+
Sbjct: 1 MKLEGVWKVFGNVVAVRDVNLYIEDKEFVSILGPSGSGKTTLLYLIAGIYKPSRGRIYFN 60
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+ DVT+LPP RNIGLVFQN+ALYPHMTVY+NIAFPL LR + I EKV VAK+L I
Sbjct: 61 DVDVTDLPPNKRNIGLVFQNYALYPHMTVYENIAFPLRLRNFGEPAIKEKVLSVAKLLGI 120
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E LLDRYP QLSGGQQQRVA+ARALVKEPEVLLLDEPLSNLDALLR+++R+ELK+LQKEL
Sbjct: 121 EGLLDRYPAQLSGGQQQRVALARALVKEPEVLLLDEPLSNLDALLRIKIRSELKKLQKEL 180
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT IYVTHDQ+EALAMADRIA+I G I QVG P +VYYKP FV F+G PP N V
Sbjct: 181 GITAIYVTHDQSEALAMADRIAIIASGVIQQVGKPWDVYYKPRNVFVASFIGTPPANLVS 240
Query: 244 ARVEDGK---LLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDA---EVIKGISEGIV 297
++ + LL Y P P++ + + + VI+GFRP A E G +
Sbjct: 241 VPLDSSRRCLLLPGGGRYCP-PRRIAEKLAAVKTNSVILGFRPEVAVLSESPLGDYVSME 299
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKAL 357
EVY+ E LGRE IVT+ VN S VKV P G ++ I ++E V+ FD ++E +
Sbjct: 300 AEVYTVETLGRENIVTLLVNGSQVKVIVPPVVEPRPGSRIFINIEEDKVMYFDPETEINV 359
Query: 358 EFL 360
E+L
Sbjct: 360 EYL 362
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 370 bits (939), Expect = e-101
Identities = 189/365 (51%), Positives = 261/365 (70%), Gaps = 10/365 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MV ++LEN+ K+FGNF A++ +NL IKDGEF+ LLGPSG GK+T L +AG+ +PT GRI
Sbjct: 10 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 69
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YF +RDVT LPPKDRNI +VFQ++A++PHMTVY+NIAFPL+++K PKDEID++VR A++
Sbjct: 70 YFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAEL 129
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L IE+LL+RYP QLSGGQ+QRVA+ARA+V EP+VLL+DEPLSNLDA LR+ +RAE+K+LQ
Sbjct: 130 LQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ 189
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
++L +TTIYVTHDQ EA+ M DRIAV+ G++LQ+G+P EVY +P FV F+G P MN
Sbjct: 190 QKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMN 249
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE------ 294
+E V DG L I +P+ +++ K V+ G RP + ++G+SE
Sbjct: 250 ILEVSVGDG-YLEGRGFRIELPQDLMDLLKDYVGKTVLFGIRP-EHMTVEGVSELAHMKR 307
Query: 295 --GIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
++G+V E LG + I+ V D +VKV P G +V + + + +FDK
Sbjct: 308 TARLIGKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEPGREVKVIMDLDMIHVFDKD 367
Query: 353 SEKAL 357
+EKA+
Sbjct: 368 TEKAI 372
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 369 bits (936), Expect = e-101
Identities = 191/365 (52%), Positives = 260/365 (70%), Gaps = 10/365 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MV +RLEN+ KKFGNF A++ +NL IKDGEF+ LLGPSG GK+T L +AG+ +PT G+I
Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YF +R+VT LPP++RNI +VFQ++A++PHMTVY NIAFPL+++K P+DEID++VR A++
Sbjct: 61 YFGDREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAEL 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L IE+LLDRYP QLSGGQ+QRVA+ARA+V EP+VLL+DEPLSNLDA LR+ +RAE+K+LQ
Sbjct: 121 LQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
++L +TTIYVTHDQ EA+ M DRIAV+ G++LQVG P EVY KP FV F+G P MN
Sbjct: 181 QKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFVATFIGAPEMN 240
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE------ 294
VE V DG L + I +P+ +++ K V+ G RP + ++G+SE
Sbjct: 241 IVEVSVGDG-YLEGKGFKIELPQDIMELLRDYIGKTVLFGIRP-EHMTVEGVSELAHMKK 298
Query: 295 --GIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
+ +V E LG + I+ V D +VKV P G++VTI + + +FDK
Sbjct: 299 TAKLNAKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEVGKEVTIVIDLDMMHVFDKD 358
Query: 353 SEKAL 357
+EKA+
Sbjct: 359 TEKAI 363
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 366 bits (929), Expect = e-100
Identities = 198/372 (53%), Positives = 258/372 (69%), Gaps = 20/372 (5%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M IRLE +VK+FG +A+D+++L IKDGEF LLGPSG GK+T L +AG+ P GRI
Sbjct: 14 MAEIRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRI 73
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAP----KDEIDEKVRK 116
D DVT PKDRN+ +VFQN+ALYPHM+V+ NIAF L LR+ KD+I +V +
Sbjct: 74 LIDGEDVTFKDPKDRNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRRVIE 133
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
VAK+L IE LLDR P QLSGGQQQRVA+ARALV+ P+V L+DEPLSNLDALLRL +RAEL
Sbjct: 134 VAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRAEL 193
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
K+LQK+L ITT+YVTHDQAEA++MADRIAV+ +G+++QVGTP+EVY +P + FV F+G
Sbjct: 194 KKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVYMRPKHTFVATFIGA 253
Query: 237 PPMNFVEARVEDGKLLISENNYIP-------VPKQYRQIIERLNVKDVIIGFRPHDAEVI 289
PPMN VE VE + E+ +I VP++ R +IE V+ + +G RP V
Sbjct: 254 PPMNLVECDVES----VGEDLWISCPGFSRRVPEEARSVIESKGVRKIYLGIRPEFISVS 309
Query: 290 KGISEG-IVGEVYSFEPLGREQIVTVSVNDSIV---KVFAPEGEHFNFGEKVTIKLKEGS 345
+ +EG I G+VY EPLG E +V V + D I+ KV E G+KV +KL
Sbjct: 310 RRETEGSIAGKVYVVEPLGSEYVVNVDIGDGIIIKAKVLGLR-EKMTPGDKVYLKLDWSK 368
Query: 346 VVLFDKKSEKAL 357
V +FD ++ +AL
Sbjct: 369 VKIFDYRTGEAL 380
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 355 bits (901), Expect = 5e-97
Identities = 187/365 (51%), Positives = 252/365 (68%), Gaps = 15/365 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M IR+ N+ K FG A+D ++ E+KDGEF+ALLGPSG GK+T L +AGIYKPTSG I
Sbjct: 1 MPSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YFD+ V ++PPK R +G+VFQN+ALYPHMTV++NIAFPL R+ KDE++++V ++A+
Sbjct: 61 YFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARK 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L I+ LLDR P QLSGGQQQRVA+ARALVK+P+VLL DEPLSNLDA LR+ +RAE+K LQ
Sbjct: 121 LLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ELGIT++YVTHDQAEA+ MA RIAV +GK++Q GTPDEVY P FV F+GNPP N
Sbjct: 181 QELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTN 240
Query: 241 FV---EARVEDGKLLISENNYI---PVPKQYRQIIERLNVKDVIIGFRPHDAEVIK-GIS 293
F+ VE+ + ++ ++ I P P + +K+V++G RP + + +
Sbjct: 241 FLRDFSVSVENKQTILKRDDVIIKLPEPVD-------VKLKEVVVGIRPEHCRISRERVE 293
Query: 294 EGIVGEVYSFEPLGREQIVTVSV-NDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
I G VY EPLGR+ IV V I+KVF G+ GE V + + LF+ +
Sbjct: 294 NSIPGVVYVVEPLGRDIIVNVKTEKGEIIKVFGDTGKAPQPGENVFLVPDLRKIHLFNPE 353
Query: 353 SEKAL 357
+E+ +
Sbjct: 354 TEETI 358
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 354 bits (898), Expect = 1e-96
Identities = 178/351 (50%), Positives = 251/351 (70%), Gaps = 7/351 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +++++ + K FGN ALD I+L + +GEF+ LLGPSG GK+TLL +AG+ + T G+I
Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+F++RDVT LPPKDRNI +VFQ++A++PHM VY NIA+PL+L+K PK+EI+++V+ A +
Sbjct: 61 FFNDRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADL 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
LHI +LLDRYP QLSGGQ+QRVA+ARA+V EPEVLL+DEPLSNLDALLR+++R+ELK+LQ
Sbjct: 121 LHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ +G+TTIYVTHDQ EA+ M DRIAV+ +GK+ QVGTP E+Y+ P+ FV GF+G+P MN
Sbjct: 181 ERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQMN 240
Query: 241 FVEARV-EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV-IKGISEGIVG 298
F+E V +G ++ +N I +P + K VI+G RP + + K + + G
Sbjct: 241 FLEMEVRSEGNSVVLQNGEIKIPAKTDP-----GAKKVILGIRPENVYLEEKPNTLKLEG 295
Query: 299 EVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
EVY E L + I+ ++V + P F GEK+T L + LF
Sbjct: 296 EVYFAEKLMSDTILHLNVGSEKIVAKIPGDVDFRSGEKITFFLDVEKIHLF 346
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 343 bits (870), Expect = 2e-93
Identities = 182/370 (49%), Positives = 256/370 (69%), Gaps = 13/370 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L N+ KKFG+F A+ ++LEIKDGEF+ LLGPSG GK+T L +AG+ +PT G+I
Sbjct: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
Query: 61 YFDERDVTE------LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
Y D++ V + +PPK+R++ +VFQ++ALYPHMTVY NIAFPL+LRK PK EID +V
Sbjct: 61 YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRV 120
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
R+VA+ML + +LL R P +LSGGQ+QRVA+ RA+++ P+V L+DEPLSNLDA LR+++RA
Sbjct: 121 REVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 180
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
ELK+LQ++LG+TTIYVTHDQ EA+ M DRIAV+ G++ QVGTPDEVY KP+ FV GF+
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFI 240
Query: 235 GNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRP---HDAEVI 289
G+PPMNF+ A V L + + K +++E N+ K+VI G RP +DA I
Sbjct: 241 GSPPMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFI 300
Query: 290 K-GISEGIV-GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
+ E IV +V E LG E+IV + + D I P+ G++ +
Sbjct: 301 RVEEPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVEEGQEAEVFFDMKKAH 360
Query: 348 LFDKKSEKAL 357
+F+K +E+A+
Sbjct: 361 VFNKTNERAI 370
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 341 bits (865), Expect = 8e-93
Identities = 180/371 (48%), Positives = 258/371 (69%), Gaps = 14/371 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L NI K+FG+ A+ +++LEIKDGEF+ LLGPSG GK+T L +AG+ +PT G+I
Sbjct: 4 MAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQI 63
Query: 61 YFDERDVTE------LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
Y ++ V + +PPK+R++ +VFQ++ALYPHMTVY NIAFPL+LRK PK EID++V
Sbjct: 64 YIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRV 123
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
R+VA+ML + +LL+R P +LSGGQ+QRVA+ RA+++ P+V L+DEPLSNLDA LR+++RA
Sbjct: 124 REVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRA 183
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
ELK+LQ++LG+TTIYVTHDQ EA+ M DRIAV+ +G++ QVGTPDEVYYKP+ FV GF+
Sbjct: 184 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFI 243
Query: 235 GNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRP---HDAEV- 288
G+PPMNF++A + D L + + + +++E N+ K+VI G RP HDA
Sbjct: 244 GSPPMNFLDATITDDGFLDFGEFKLKLLQDQFEVLEEENMVGKEVIFGIRPEDVHDASFT 303
Query: 289 -IKGISEGIV-GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSV 346
I E V V E LG E+IV + + P+ G++V++ +
Sbjct: 304 HIDVPEENTVKATVDIIENLGGEKIVHLRRGNISFTAKFPKESKVREGDEVSVVFDMKKI 363
Query: 347 VLFDKKSEKAL 357
+F K +EKA+
Sbjct: 364 HIFRKDTEKAI 374
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 339 bits (861), Expect = 2e-92
Identities = 178/359 (49%), Positives = 246/359 (67%), Gaps = 19/359 (5%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+RLE IVK+FG +AL I+LEIKDGE + LLGPSG GK+T L VAG+ +P +GR+YFD
Sbjct: 6 VRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFD 65
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
RDVT LPPKDRN+ +VFQ++AL+PHM V+ NIAFPL+++K P+DEI +VR A++L I
Sbjct: 66 GRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWAAELLEI 125
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ LLDRYP QLSGGQQQRVA+ARA+V EPEVLL+DEPLSNLDA+LR+++R+E+K+LQ+ L
Sbjct: 126 DHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIKKLQRRL 185
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G+T IYVTHDQ EA+ + DRI V+ G+I QVGTP +VY++P FV F+G+P MN
Sbjct: 186 GVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHRPANTFVATFIGSPQMNLFS 245
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKD--VIIGFRPHDAEVIKGISEGIVGEVY 301
+V G+L + I+E + + D V++G RP D + KG + E Y
Sbjct: 246 GKVAGGRL-----------EALGGIVEGVGLPDGEVLVGVRPEDVALGKG---DLTFEAY 291
Query: 302 --SFEPLGREQIVTVSV-NDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKAL 357
E LG + +V + + ++ GE + G +V + + +FDK+S KA+
Sbjct: 292 VDFVEDLGSDSVVHLKTQSGQVIVAKLSGGEPPSPGSRVIAGVSREKIHIFDKESGKAI 350
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 334 bits (847), Expect = 1e-90
Identities = 177/366 (48%), Positives = 243/366 (66%), Gaps = 9/366 (2%)
Query: 1 MVRIRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++ LEN+ K + N +A+ N NL ++D EF+ LLGPSG GK+T L +AG+ + T G+
Sbjct: 3 MAQVVLENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGK 62
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
IY D + V ++ PKDR+I +VFQN+ALYPHMTVY+N+AF L+LRK PKDEID +VR+ AK
Sbjct: 63 IYIDGKVVNDVEPKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKYPKDEIDRRVREAAK 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L IE LLDR P QLSGGQ+QRVA+ RA+V+ P+V L DEPLSNLDA LR+++R+ELK+L
Sbjct: 123 ILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSELKKL 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
L T IYVTHDQ EA+ MAD+I V+++G+I Q+GTP E+Y P FV GF+G+PPM
Sbjct: 183 HHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEIYNSPANVFVAGFIGSPPM 242
Query: 240 NFVEARV--EDGKLLISENNY-IPVPKQYRQIIERLNVKDVIIGFRPHDA-----EVIKG 291
NFV ARV +G L I + + + VPK++ + K++I G RP D +
Sbjct: 243 NFVNARVVRGEGGLWIQASGFKVKVPKEFEDKLANYIDKEIIFGIRPEDIYDKLFALAPS 302
Query: 292 ISEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDK 351
I G V EPLG E I+ V V D ++ +K+ + L + FDK
Sbjct: 303 PENTITGVVDVVEPLGSETILHVKVGDDLIVASVNPRTQAKEEQKIDLVLDMTRMHAFDK 362
Query: 352 KSEKAL 357
++EKA+
Sbjct: 363 ETEKAI 368
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 327 bits (829), Expect = 1e-88
Identities = 182/372 (48%), Positives = 250/372 (66%), Gaps = 16/372 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +RL ++ K FG A+ ++LE+KDGEFM LLGPSG GK+T L +AG+ +P+ G+I
Sbjct: 1 MAGVRLVDVWKVFGEVTAVRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 YFDERDVTE------LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
Y +R V + +PPKDR+I +VFQ++ALYPHMTVY NIAFPL+LRK P+ EID++V
Sbjct: 61 YIGDRLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
R+VA++L + +LL+R P +LSGGQ+QRVA+ RA+V++P+V L+DEPLSNLDA LR+ +RA
Sbjct: 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRA 180
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
ELK+LQ++LG+TTIYVTHDQ EA+ M DRIAV+ G + QVG+PDEVY KP FV GF+
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 240
Query: 235 GNPPMNFVEARV-EDGKLLISENNYIPVPKQYRQIIERLNV-KDVIIGFRPHDAEVIKGI 292
G+PPMNF++A V EDG + E +P Q+ + E V ++VI G RP D
Sbjct: 241 GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFA 300
Query: 293 SEGIVGE------VYSFEPLGREQIVTVSVND-SIVKVFAPEGEHFNFGEKVTIKLKEGS 345
+ GE V E LG E+IV + V + V F E G +V +
Sbjct: 301 RVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGAFRSE-SRVREGVEVDVVFDMKK 359
Query: 346 VVLFDKKSEKAL 357
+ +FDK + KA+
Sbjct: 360 IHIFDKTTGKAI 371
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 325 bits (824), Expect = 5e-88
Identities = 181/372 (48%), Positives = 250/372 (66%), Gaps = 16/372 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +RL ++ K FG A+ ++LE+KDGEFM LLGPSG GK+T L +AG+ +P+ G+I
Sbjct: 1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 YFDERDVTE------LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
Y ++ V + +PPKDR+I +VFQ++ALYPHMTVY NIAFPL+LRK P+ EID++V
Sbjct: 61 YIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
R+VA++L + +LL+R P +LSGGQ+QRVA+ RA+V++P+V L+DEPLSNLDA LR+ +RA
Sbjct: 121 REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRA 180
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
ELK+LQ++LG+TTIYVTHDQ EA+ M DRIAV+ G + QVG+PDEVY KP FV GF+
Sbjct: 181 ELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 240
Query: 235 GNPPMNFVEARV-EDGKLLISENNYIPVPKQYRQIIERLNV-KDVIIGFRPHDAEVIKGI 292
G+PPMNF++A V EDG + E +P Q+ + E V ++VI G RP D
Sbjct: 241 GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFA 300
Query: 293 SEGIVGE------VYSFEPLGREQIVTVSVND-SIVKVFAPEGEHFNFGEKVTIKLKEGS 345
+ GE V E LG E+IV + V + V F E G +V +
Sbjct: 301 QVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGSFRSE-SRVREGVEVDVVFDMKK 359
Query: 346 VVLFDKKSEKAL 357
+ +FDK + KA+
Sbjct: 360 IHIFDKTTGKAI 371
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 313 bits (794), Expect = 2e-84
Identities = 167/368 (45%), Positives = 241/368 (65%), Gaps = 19/368 (5%)
Query: 1 MVRIRLENIVKKFGN------FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYK 54
M +RLE++ + FG + +INL I +GEF +LGPSGSGKST+L +AG+ K
Sbjct: 1 MTVVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEK 60
Query: 55 PTSGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
SG I+ DE ++T+ PPKDR++ +VFQN+ALYP MTVY NIAFPL+++K K EIDE+V
Sbjct: 61 VDSGHIFLDEYEITDFPPKDRDMAMVFQNYALYPFMTVYDNIAFPLKIQKISKQEIDERV 120
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
R+VAK+L IE +L+ P Q+SGGQ+QRVA+ RA+++ P V L+DEPLSNLDA LR +R
Sbjct: 121 REVAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSNLDAKLRGTMRV 180
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
ELK+L ++LGITTIYVTHDQ EA+ +ADR+ VI G ++QVG P +VY P F+ GF+
Sbjct: 181 ELKKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVGGPMDVYDSPANTFIAGFV 240
Query: 235 GNPPMNFVEAR-VEDG--KLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKG 291
G+PP+NF++ V +G K+L + + +++ NV +V +G RP D I
Sbjct: 241 GDPPINFIDGTIVTEGRDKILRINEFKLDIGQEFPD-----NVAEVTVGIRPED---IGE 292
Query: 292 ISEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEG--EHFNFGEKVTIKLKEGSVVLF 349
EG V E+ + +PLGR ++ V ++ ++ + GE+V + +++F
Sbjct: 293 GDEGFVAELEAIQPLGRRRLEYYIVKNTGTRIVRATSLLQERRIGEEVKLIPLNNRLLIF 352
Query: 350 DKKSEKAL 357
DK S K L
Sbjct: 353 DKSSGKLL 360
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 312 bits (791), Expect = 4e-84
Identities = 166/332 (50%), Positives = 226/332 (68%), Gaps = 11/332 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M R+ L+N+ K FG+ +A++ +NLE+KDGEFM LLGPSG GKST L +AG+ PT G I
Sbjct: 1 MARVLLKNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ ++ V ++ P RN+ +VFQN+ALYPHMTV+ NI FPL++ PK E +KV+++A
Sbjct: 61 WIGDKLVNDIDPTKRNVAMVFQNYALYPHMTVFGNIEFPLKMAGVPKSERIKKVKEIADF 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR-L 179
L I LL+R P +LSGGQQQRVA+ARALV+EPEV LLDEPLSNLDA +R ++R ELK+ L
Sbjct: 121 LGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLDAKIRTQMRFELKKLL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+L ITTIYVTHDQ EA+ MADRIAV+ +G I QVGTPDE++YKP FV F+G+P M
Sbjct: 181 SYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEIFYKPKNTFVATFVGSPQM 240
Query: 240 NFVEARV--EDGKLLISENNYIPVPKQYRQIIERLNVKD-VIIGFRPHDAEVIKGISEGI 296
N +E + +DGK++ + ++ E LN++ VI+GFRP EV + E
Sbjct: 241 NLIEGEIIKKDGKVIFDCGEF------SLRLPEDLNIEGRVILGFRPQHVEVSEMPREDF 294
Query: 297 V-GEVYSFEPLGREQIVTVSVNDSIVKVFAPE 327
+ G++ E LG E + D + + PE
Sbjct: 295 IEGKLIGIEKLGVESYAHPAYGDVEIIIRVPE 326
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 304 bits (770), Expect = 1e-81
Identities = 163/362 (45%), Positives = 237/362 (65%), Gaps = 10/362 (2%)
Query: 1 MVRIRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
M ++LENI K++ L +NLEI+ GEF+ +LGPSG GK+T+L +AG+ +
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 57 SGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
G +Y V +LPPKDR + +V QN+A+YP M+VY NIAFPL++ KDEI ++V +
Sbjct: 62 KGHVYLRGEVVDDLPPKDRRVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEIKKRVLE 121
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
VA+ML I+ LL+R P QLSGGQ QRVAIARALVK +++L+DEPLSNLDA +R+ R EL
Sbjct: 122 VARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVAREEL 181
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
K+LQ++L T IYVTHDQ EAL++A ++A++ +G + G P E+Y +P +VG FLGN
Sbjct: 182 KQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKRPNSAWVGSFLGN 241
Query: 237 PPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGI 296
PPMN + +E G +I ++ I +P++Y+ +++ N + V++G RP D E+ S I
Sbjct: 242 PPMNIIRGEIE-GDSIIIDSYRIGLPEEYKNLVK--NGQKVLVGVRPEDMEIRN--SGEI 296
Query: 297 VGEVYSFEPLGREQIVTVSVN-DSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEK 355
G+V E LG I+ + +N ++ ++V GEKV I + VVLFD SE+
Sbjct: 297 EGKVEMVEDLGPYSIIHLKINEETTIRVIEKSLSRRERGEKVRISIDTSKVVLFDASSER 356
Query: 356 AL 357
L
Sbjct: 357 NL 358
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 303 bits (769), Expect = 2e-81
Identities = 159/358 (44%), Positives = 227/358 (62%), Gaps = 19/358 (5%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
+EN+ ++G+ L N NL ++DGEF +LG SGSGK+TLL ++AG+ GRI D
Sbjct: 5 IENLTARYGDKYILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPIDDGRILIDGN 64
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
DVT+L P DRNI +VFQN+ALYPHMTVY NI+ L+++ PKDEI +KV VA+MLHI +
Sbjct: 65 DVTDLYPSDRNIAMVFQNFALYPHMTVYDNISLNLKIKHVPKDEIKKKVSDVAEMLHISQ 124
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
L +YP QLSGG+QQRV IARA+V++P V L+DEPLSNLDA LR E+ EL+ +++
Sbjct: 125 HLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLDAKLRREMLGELRSFHEKVKK 184
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
T IYV HDQ EA+A+ADRI V+ +G+I+Q+GTPDE+Y P FV GF+GNPPMN +E
Sbjct: 185 TIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDELYDHPANVFVAGFIGNPPMNILECD 244
Query: 246 VED----GKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVY 301
E+ ++ + + Y+ V + + + ++ +IG HD GI
Sbjct: 245 AEEKSGGTRIDVMNSGYLEVDDEIPEGKMFIGIRPELIGLSDHD---------GISASFD 295
Query: 302 SFEPLGREQIVTVSVNDSIVKVFAPEGE------HFNFGEKVTIKLKEGSVVLFDKKS 353
F G V V + D+ ++ P+ E GE + +K+K G++ L+D++S
Sbjct: 296 YFINSGLNAEVHVKIGDTPIRAVIPKEEIPANLRDLRNGESIHLKVKPGTIYLYDRES 353
>gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Thermoanaerobacter
ethanolicus]
Length = 371
Score = 302 bits (766), Expect = 3e-81
Identities = 156/370 (42%), Positives = 236/370 (63%), Gaps = 13/370 (3%)
Query: 1 MVRIRLENIVKKF-----GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKP 55
M +I E++ K+F G IA+++ N I+D EF+ L+GPSG GK+T L +AG+ +
Sbjct: 1 MAKIVFEHVTKEFIDEKRGKVIAVNDANFTIEDKEFVVLVGPSGCGKTTTLRMIAGLERQ 60
Query: 56 TSGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVR 115
T G IY E+ V LPPKDR+I +VFQ++ALYPHMTVY+N++F L K P+ EI++KV+
Sbjct: 61 TKGNIYIGEKLVNYLPPKDRDIAMVFQDYALYPHMTVYENLSFGLRNLKVPRTEIEQKVK 120
Query: 116 KVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
+ A++L I +LLDR P +LSGGQ+QRVA+ RA+V+ P+V L DEPLSNLDA LR+++R E
Sbjct: 121 RAAEILGISELLDRKPRELSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRVE 180
Query: 176 LKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
L L K+L T +YVTHDQ EA+ + RI V+ G I Q+ TPDE+Y +P+ FV GF+G
Sbjct: 181 LAELHKKLETTIVYVTHDQVEAMTLGQRIIVMNLGIIQQIATPDELYNRPVNMFVAGFIG 240
Query: 236 NPPMNFVEARVEDGKLLISE---NNYIPVPKQYRQIIERLNVKDVIIGFRP---HDAEVI 289
P MNF+ +VE K+++S+ N +P++++++I +N K++++G RP +DA
Sbjct: 241 APSMNFINCKVERNKIILSDGNSNTMFDIPQKFKKVIANINGKEMVMGIRPEDIYDAVFS 300
Query: 290 KGISEGIVGEVY--SFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
+ I + +VY E LG E ++ + + GE + +
Sbjct: 301 QNIENKLHVDVYVKVVEKLGSENLIYFDKYGTTITARVNSQSRIVSGEYAKVAFNIDKIY 360
Query: 348 LFDKKSEKAL 357
LFDK++ A+
Sbjct: 361 LFDKETGIAI 370
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 292 bits (740), Expect = 4e-78
Identities = 156/364 (42%), Positives = 236/364 (63%), Gaps = 7/364 (1%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M + LE++ K +GN A+ + NLEI D EFM +GPSG GKST L +AG+ + G
Sbjct: 36 MAEVILEHVNKYYGNKQHAVKDFNLEIADREFMVFVGPSGCGKSTTLRMIAGLEDISDGV 95
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ +R V ++PPKDR+I +VFQN+ALYPHM VY+N+AF L+LRK P++EID++VR A+
Sbjct: 96 LRIGDRVVNDVPPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKTPREEIDKRVRDAAR 155
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L IE LL R P +LSGGQ+QRVA+ RA+V+EP V L+DEPLSNLDA LR+E+R+++ +L
Sbjct: 156 ILQIEHLLGRKPKELSGGQRQRVAMGRAIVREPSVFLMDEPLSNLDAKLRVEMRSQISQL 215
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ LG T IYVTHDQ EA+ + +RI V+R+G I+QV TP +Y P +FV GF+G+P M
Sbjct: 216 HRRLGATIIYVTHDQVEAMTLGNRIVVMRDGVIMQVDTPMNLYDFPQNRFVAGFIGSPSM 275
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVI--KGISEG-- 295
NF+ ARV++G+ +I ++ + + + + ++V +G RP ++ + +G
Sbjct: 276 NFLTARVQNGEFVIGQSQ-VAAMGRLAESLRAYEGREVFLGIRPEHVGLVGHSDLPQGRN 334
Query: 296 -IVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSE 354
+ GEV E LG + + V V V G++V + + + + FD ++E
Sbjct: 335 VLRGEVVVVESLGAQTDLIVDVAGQQVTAKVEGMAPVQPGDQVELLIDQTRLHAFDTETE 394
Query: 355 KALE 358
A++
Sbjct: 395 LAID 398
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 291 bits (738), Expect = 6e-78
Identities = 151/298 (50%), Positives = 209/298 (69%), Gaps = 15/298 (5%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MV I L +I+K+FG F ++L +KDGE + LLGPSG GK+T L +AG+ KP GR+
Sbjct: 1 MVSIELRDIIKRFGEFEL--KVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRV 58
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
YFD RD+T+LPP +RNIGLVFQ++AL+PHMTV+KN+AF LE+R+ P+ EI+++VR+V +
Sbjct: 59 YFDGRDITDLPPYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLDL 118
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ + +R P +LSGGQQQRVA+ARALV EP+VLLLDEPLSNLDA +R ++R E+KR+
Sbjct: 119 VGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRIV 178
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KELGITTIYVTHDQ EA+ ++DRIAV+ G+I QVG P ++YY P +FV FLG N
Sbjct: 179 KELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFLG--ISN 236
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
VE ++G+ + + + + +I FRP + V +GI ++G
Sbjct: 237 IVELEAKEGRACLGDLCFEVGREGKGKIF-----------FRPENVAVGEGIEAEVIG 283
>dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens]
Length = 369
Score = 290 bits (735), Expect = 1e-77
Identities = 158/368 (42%), Positives = 231/368 (61%), Gaps = 11/368 (2%)
Query: 1 MVRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M + L++I K + G+ A+ + NLEI D EF+ +GPSG GKST L +AG+ + + G
Sbjct: 1 MANLSLKHIYKVYPGDVTAVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISKGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+Y +R V E+ PK+R+I +VFQ++ALYPHMTVY N+AF L+LRK PKDEID+KV+ AK
Sbjct: 61 LYIGDRLVNEVEPKERDIAMVFQSYALYPHMTVYDNMAFGLKLRKVPKDEIDKKVKDAAK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L IE LLDR P LSGGQ+QRVA+ RA+V+EP+V L+DEPLSNLDA LR+++R E+ +L
Sbjct: 121 ILDIEHLLDRKPKALSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRTEISKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ L T IYVTHDQ EA+ M RI V+++G + QV +P E+Y P FV GF+G+P M
Sbjct: 181 HQRLQTTFIYVTHDQVEAMTMGTRIVVMKDGIVQQVDSPQEIYNNPANIFVAGFIGSPQM 240
Query: 240 NFVEARV--EDGKLLIS-ENNYIPVPKQYRQIIERLNV--KDVIIGFRPHDAEVIKGISE 294
NF++ + E GK ++ I +P ++++ K+VIIG RP + + + E
Sbjct: 241 NFIDGTIKEEGGKYFACFQSEKIEMPMDKARLLKEKGYIGKNVIIGVRPEHLDDDQELGE 300
Query: 295 G-----IVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
G I +V E +G E + + D + V G++ + + +F
Sbjct: 301 GKSTTVIKSKVEVTELMGAESYIYTKLGDQNITVRVNGSTKLQNGQEAKFYVDANKIHIF 360
Query: 350 DKKSEKAL 357
DK++E L
Sbjct: 361 DKETELKL 368
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 289 bits (731), Expect = 4e-77
Identities = 141/235 (60%), Positives = 178/235 (75%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M IRLE++ K+FGN +ALD ++L I DGE LLGPSG GK+T L +AG P GR+
Sbjct: 1 MAGIRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRV 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
Y RDVT L P +RN +VFQN+AL+PHM V+ NIA+ L+LRK P+ EI +VR A++
Sbjct: 61 YIGSRDVTMLKPYERNTAMVFQNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRVRWAAEL 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L I+ LLDRYP QLSGGQQQRVA+ARA+V EPEVLL+DEPLSNLDA LRL++R E+ RLQ
Sbjct: 121 LEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIVRLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
K LG+T +YVTHDQ EAL+++ R+AV+ G++ QVGTP EVY KP FV F+G
Sbjct: 181 KRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEVYEKPATYFVATFIG 235
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 289 bits (731), Expect = 4e-77
Identities = 166/350 (47%), Positives = 223/350 (63%), Gaps = 24/350 (6%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
MVR+ L + KKF F ++LE+KDGE +++LGPSG GK+T L +AG+ +P G +
Sbjct: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
FD RDVT LPP RNIG VFQ++AL+PHM V+KN+AF LE+RK P+ EI+ KVR+V ++
Sbjct: 59 LFDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLEL 118
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ ++ +R P QLSGGQQQRVA+ARALV EPEVLLLDEPLSNLDA +R +R E+KR+Q
Sbjct: 119 VGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQ 178
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KELGITT+YVTHDQ EA+A++DRIAV+ G+I QVG P E+YY P +FV FLG N
Sbjct: 179 KELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTG--N 236
Query: 241 FVEARVEDGKLLISE---NNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
++ R +G + E N + P V + FRP E+ K EG+
Sbjct: 237 LLKLRSTNGVACLGELCFNVGVDGP--------------VKVFFRPESVEIGK---EGVE 279
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
EV +E L +SV + + +KV IK+K S++
Sbjct: 280 AEVMDYEILPGRIRFRLSVQGKEIIAEDSLARYEEIPKKVYIKVKRFSLL 329
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 288 bits (730), Expect = 6e-77
Identities = 159/362 (43%), Positives = 230/362 (62%), Gaps = 9/362 (2%)
Query: 1 MVRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M I+L+N+ K + G+ A+ + NL+IKD EF+ +GPSG GKST L +AG+ + G
Sbjct: 1 MAEIQLKNVYKIYDGDVQAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ + + ++ PKDR+I +VFQN+ALYPHM VY N+AF L+LRK KDEID++V+ AK
Sbjct: 61 LLIGGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKRVKNAAK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L +E++LDR P +SGGQ+QRVA+ RA+V++P+V L+DEPLSNLDA LR+++RAE+ +L
Sbjct: 121 ILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ L TTIYVTHDQ EA+ MA RI ++++G I QVG+P EVY P FVGGF+G+P M
Sbjct: 181 HQRLQTTTIYVTHDQTEAMTMATRIVIMKDGVIQQVGSPKEVYDFPENVFVGGFIGSPSM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIER--LNVKDVIIGFRP---HDAEVIKGISE 294
NF+ R+E +L I N I VP+ ++ K++I+G RP HD + S
Sbjct: 241 NFLNGRLEGSQLKIG-NVSIEVPEGKLAVLREHGYEGKELILGIRPEDIHDELLFIESSP 299
Query: 295 G--IVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
G I + E G E ++ ++D + G+KV + L FD +
Sbjct: 300 GSKITAHIEVAELTGAETVLYSQLSDQEIIARVDSRSDIQSGDKVELALDMNKCHFFDPE 359
Query: 353 SE 354
SE
Sbjct: 360 SE 361
>gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protein [Bacillus
firmus]
Length = 366
Score = 288 bits (729), Expect = 7e-77
Identities = 155/362 (42%), Positives = 223/362 (60%), Gaps = 9/362 (2%)
Query: 1 MVRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M I+L+NI K + G+ A+ + NL+IKD EF+ +GPSG GKST L +AG+ + G
Sbjct: 1 MADIQLKNIYKIYDGDVTAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+Y +R V ++ PKDR+I +VFQN+ALYPHM VY+N+AF L+LRK KDEID +VR AK
Sbjct: 61 LYIGDRRVNDVAPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKFKKDEIDRRVRDAAK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L +E +LDR P +SGGQ+QRVA+ RA+V++P+V L+DEPLSNLDA LR+++RAE+ +L
Sbjct: 121 ILGLEAMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
K L TTIYVTHDQ EA+ MA RI ++++G I QVGTP +VY P FVGGF+G+P M
Sbjct: 181 HKRLQTTTIYVTHDQTEAMTMATRIVIMKDGFIQQVGTPKDVYDNPENVFVGGFIGSPSM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRPHDAE-----VIKGI 292
NF+ ++E + + + VP ++ K++I+G RP D +
Sbjct: 241 NFITGKIEGDYFKVGDVT-VKVPAGKLSVLRDKGYMNKEIILGIRPEDIHDELLFIESSP 299
Query: 293 SEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
+ E+ E G E ++ SVN G+ + + FD +
Sbjct: 300 ETKLTAEIDVAELTGAETVLYSSVNGQAFVARIDSRTDIEGGQSLDLAFDMNKSHFFDAE 359
Query: 353 SE 354
+E
Sbjct: 360 TE 361
>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 386
Score = 284 bits (718), Expect = 1e-75
Identities = 163/364 (44%), Positives = 236/364 (64%), Gaps = 16/364 (4%)
Query: 1 MVRIRLENIVKKFGNFIA--LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
M + L N+ K +G+ +A L +I L+I GEF+ L+GPSG GKSTL+ +AG+ T G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
I D +D++ + PKDR+I +VFQ++ALYP M+V +NIAF L++RK P+ IDE+V +VA
Sbjct: 61 AILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVA 120
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++L IE LL+R P QLSGGQQQRVA+ RAL + P+V L DEPLSNLDA LR+E+R ELK
Sbjct: 121 RLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEPLSNLDAKLRVEMRTELKL 180
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPP 238
+ + L TT+YVTHDQ EA+ + D++AV+++G I Q GTP ++Y P FV F+G+PP
Sbjct: 181 MHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPANLFVASFIGSPP 240
Query: 239 MNFVEARVE--DGK---LLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKG-I 292
MNF+ R++ DG+ LL S + I +P +E +++I+G RP + G
Sbjct: 241 MNFIPLRLQRRDGRWTGLLDSGQDRIELPLSLEPGLE--EGRELILGVRPEQIALGDGSA 298
Query: 293 SEGIVGEVYSFEPLGREQIVTVSVNDSIVKV---FAPEGEHFNFGEKVTIKLKEGSVVLF 349
+ + EV EP G + +V V+VN VKV AP+ G ++++ V+LF
Sbjct: 299 AHDLRTEVEVLEPTGPDTLVFVTVNQ--VKVCCRLAPDVAP-AAGSGMSLRFDPARVLLF 355
Query: 350 DKKS 353
D +S
Sbjct: 356 DAQS 359
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 282 bits (713), Expect = 6e-75
Identities = 154/352 (43%), Positives = 223/352 (62%), Gaps = 8/352 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + + N+ K++G + ++ I+DGEF+ L+GPSG GKSTLL +AG+ + + G +
Sbjct: 17 MTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDL 76
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ + P K+R++ +VFQN+ALYPHMTV +N+ F L+LRK P+ EIDE+V K A +
Sbjct: 77 LMGADVINDRPAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPRAEIDERVDKAAAI 136
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + KLLDRYP LSGGQ+QRVA+ RA+V++P+V L DEPLSNLDA LR+++RAE+K L
Sbjct: 137 LGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIKALH 196
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ L ITT+YVTHDQ EA+ MAD+I V+ EG++ Q+GTP E+Y +P FV GF+G+P MN
Sbjct: 197 QRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDRPANIFVAGFIGSPSMN 256
Query: 241 FVEARV--EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
F+ A V +G LL + + +P + +V G RP ++ + GI
Sbjct: 257 FLPATVAATNGPLLKTPEG-VALPIDGGPTL--TGRSEVTYGIRPEHLQLGE---TGIPA 310
Query: 299 EVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
EV EP G E + V+V V + GEK+ + ++G LFD
Sbjct: 311 EVVVVEPTGSETQLYVTVGGREVVAVLRDRVDVRPGEKIWLTPRKGCAHLFD 362
>pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog yurJ - Bacillus
subtilis >gi|2635752|emb|CAB15245.1| (Z99120) similar to
multiple sugar ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 367
Score = 282 bits (713), Expect = 6e-75
Identities = 154/367 (41%), Positives = 227/367 (60%), Gaps = 11/367 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + E++ K + + + + + +L++KD E + L+GPSG GKST L VAG+ + G +
Sbjct: 1 MASLTFEHVKKSYHSQLTVKDFDLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D V +LPPK+R+I +VFQN+ALYPHMTV+ N+AF L+LRK K EI E+V A++
Sbjct: 61 LIDGERVNDLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLRKMAKQEIAERVHAAARI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L IE LL R P LSGGQ+QRVA+ R++V+EP+V L+DEPLSNLDA LR+ +R E+ +L
Sbjct: 121 LEIEHLLKRKPKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ L T IYVTHDQ EA+ M DRI V+ EG+I QV P ++Y+ P FV GF+G+P MN
Sbjct: 181 QRLEATIIYVTHDQTEAMTMGDRIVVMNEGEIQQVAKPHDIYHYPANLFVAGFIGSPGMN 240
Query: 241 FVEARVED--GKLLISENN---YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG 295
F++ +E G+L + ++ +IP K R + + +I G RP + G ++
Sbjct: 241 FLKGIIEQQHGELFFTNSSIRLHIPEEKAKRLKEKGYAGEQMIAGVRPEHITQMTG-NDQ 299
Query: 296 IVGEVYSF-----EPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
+ V+ E LG E IV V D +KV + G+ + + +K VV FD
Sbjct: 300 LFDSVFQANVEVNENLGSELIVHVMAGDERLKVRLDGNTRIDAGDSIQLSVKMDHVVFFD 359
Query: 351 KKSEKAL 357
++E+A+
Sbjct: 360 AETEEAV 366
>sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMX
>gi|7442505|pir||B69661 multiple sugar-binding transport
ATP-binding protein msmX - Bacillus subtilis
>gi|1783246|dbj|BAA11723.1| (D83026) highly homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636416|emb|CAB15907.1| (Z99123)
multiple sugar-binding transport ATP-binding protein
[Bacillus subtilis]
Length = 365
Score = 279 bits (707), Expect = 3e-74
Identities = 156/362 (43%), Positives = 228/362 (62%), Gaps = 9/362 (2%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M +R+E+I K + A+D+ NL I D EF+ +GPSG GKST L VAG+ + + G
Sbjct: 1 MAELRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMVAGLEEISKGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
Y + + V ++ PKDR+I +VFQN+ALYPHMTVY NIAF L+LRK PK EI ++V + AK
Sbjct: 61 FYIEGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKMPKPEIKKRVEEAAK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L +E+ L R P LSGGQ+QRVA+ RA+V++ +V L+DEPLSNLDA LR+++RAE+ +L
Sbjct: 121 ILGLEEYLHRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEIIKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ L TTIYVTHDQ EAL MA RI V+++GKI Q+GTP +VY P FVGGF+G+P M
Sbjct: 181 HQRLQTTTIYVTHDQTEALTMATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRPHDAE----VIKGI- 292
NF + ++ DG + I + + VP+ +++ K+VI G RP D V++
Sbjct: 241 NFFKGKLTDGLIKIG-SAALTVPEGKMKVLREKGYIGKEVIFGIRPEDIHDELIVVESYK 299
Query: 293 SEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKK 352
+ I ++ E LG E ++ +++ G+++T+ FD +
Sbjct: 300 NSSIKAKINVAELLGSEIMIYSQIDNQDFIARIDARLDIQSGDELTVAFDMNKGHFFDSE 359
Query: 353 SE 354
+E
Sbjct: 360 TE 361
>pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1000120|gb|AAB41280.1| (U32936) orf 363
[Synechocystis PCC6803] >gi|1653830|dbj|BAA18741.1|
(D90916) ATP binding protein responsible for multiple
sugar import [Synechocystis sp.]
Length = 363
Score = 277 bits (701), Expect = 1e-73
Identities = 150/355 (42%), Positives = 226/355 (63%), Gaps = 13/355 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + E + K+F +++A++N+NLEI+DGEF+ +GPSG GK+T L +AG+ + G+I
Sbjct: 1 MASVSFEQVTKQFDDYVAVNNLNLEIEDGEFLVFVGPSGCGKTTSLRLLAGLETVSQGQI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+R V EL PKDR+I +VFQ++ALYPHM+VY+N+AF L+L+ PK+EI ++V A++
Sbjct: 61 CIGDRRVNELSPKDRDIAMVFQSYALYPHMSVYENMAFSLDLQGKPKEEIRQRVCSAAEL 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L IEKLL R P +LSGGQ+QRVA+ RA+V++P V L+DEPLSNLDA+LR++ R E+ +L
Sbjct: 121 LGIEKLLHRKPKELSGGQRQRVAVGRAIVRKPSVFLMDEPLSNLDAMLRVQARKEISKLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+L T IYVTHDQ EA+ M DRIAV+++G + QV +P +Y +P FV GF+G+P MN
Sbjct: 181 SDLATTFIYVTHDQVEAMTMGDRIAVMKDGILQQVDSPANLYNQPANLFVAGFIGSPAMN 240
Query: 241 F--VEARVEDGKLLIS-ENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
F VE ++GK +S + +P+P + + + + +G RP + + +
Sbjct: 241 FFQVERLSQEGKEKLSLDGVVLPMPDS----VAKNGDRPLTLGIRPENIY----HPQYLP 292
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHF--NFGEKVTIKLKEGSVVLFD 350
E+ E +V + N+ IV P G F +V IK K+ + D
Sbjct: 293 LEIEPMELPATVNLVEMMGNELIVYAQTPAGTEFVARIDPRVNIKQKDSVKFVVD 347
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 275 bits (695), Expect = 7e-73
Identities = 160/354 (45%), Positives = 219/354 (61%), Gaps = 48/354 (13%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I L+ + K FG+F +D+I+L ++ GEF +LG SGSGK+TLL +AG+ K +SG+I
Sbjct: 2 ITLKEVTKFFGSFKVIDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKILIS 61
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
DVT+LPP R+IG+VFQ++ALYP+ V++N+ LE + K + +E++ +++K L I
Sbjct: 62 NEDVTDLPPSKRDIGMVFQSYALYPNKKVFENLMIALENSEINKKDKEERIIEISKQLEI 121
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
L+D+YP QLSGGQQQRVAIA+ALVK P+VLL+DEPLSNLD LR R +K++QKE
Sbjct: 122 YHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSARKLIKKVQKEF 181
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
ITTIYVTHD EALA+ADRI VI +G++LQVG P+++Y P+ K V +GNPPM+FV+
Sbjct: 182 NITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNNPLSKEVASLVGNPPMSFVK 241
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK--GISEGIVGEVY 301
DGK IIG RP D +IK G EGIV
Sbjct: 242 I---DGK---------------------------IIGVRP-DNIIIKDNGTYEGIVS--- 267
Query: 302 SFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEK 355
+ E G ++ + D+ VK + E ++KEGS V FD S K
Sbjct: 268 NCEFWGSYYLIYIDFIDNEVKAISKE------------RIKEGSKVKFDFISYK 309
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 274 bits (693), Expect = 1e-72
Identities = 149/358 (41%), Positives = 221/358 (61%), Gaps = 4/358 (1%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ ++N+VK++ + ++L+I+ GEF+ L+GPSG GKST L VAG+ + + G I D
Sbjct: 5 VSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRID 64
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
R + +L PKDR++ +VFQN+ALYPH+ V NI+F L L++ K ID V+ A +L +
Sbjct: 65 GRVINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGL 124
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ LL+R P LSGGQ+QRVA+ RA+V++P+V L DEPLSNLDA LR ++RAE+KRL + L
Sbjct: 125 QPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRAEIKRLHQRL 184
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G T IYVTHDQ EA+ +ADRI V+R+G I Q+G P +++ P FV F+G+PPMN +
Sbjct: 185 GTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMP 244
Query: 244 ARVE-DGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV--IKGISEG-IVGE 299
AR+ D + N + R ++V+ G RP D + ++G I
Sbjct: 245 ARIAVDSTQHVELNGGNRISLLPRAGTHLAPGQEVVFGIRPEDVTLDGVEGSERAQIKAT 304
Query: 300 VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKAL 357
V EPLG E I+ +V D + V + G+ VT+ + V LFD +S+ ++
Sbjct: 305 VDIVEPLGSESILHATVGDHSLVVKVGGLNEVHPGDPVTLHVDLTRVHLFDAQSQASI 362
>emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli]
Length = 377
Score = 273 bits (692), Expect = 2e-72
Identities = 145/318 (45%), Positives = 206/318 (64%), Gaps = 6/318 (1%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNI 77
A+D +++ I+DGEF+ L+GPSG GKST L +AG+ G I +RDVT LPPKDR+I
Sbjct: 20 AVDQLDIAIEDGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDI 79
Query: 78 GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
+VFQN+ALYPHMTV N+ F L++ PK EI +KV + AK+L + + LDR P LSGG
Sbjct: 80 AMVFQNYALYPHMTVADNMGFALKIAGVPKAEIRQKVEEAAKILDLTQYLDRKPKALSGG 139
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
Q+QRVA+ RA+V+EP+V L+DEPLSNLDA LR+ R ++ LQ+ LGITT+YVTHDQ EA
Sbjct: 140 QRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEA 199
Query: 198 LAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENN 257
+ M DR+AV+++G + QV +P +Y KP FV GF+G+P MN VE + DG + N+
Sbjct: 200 MTMGDRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFG-NS 258
Query: 258 YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSFEPLGREQIVTVSVN 317
+PV ++ ++ + V +G RP +V++ G V S + + VSVN
Sbjct: 259 VVPVNREALSAADK-GDRTVTVGVRPEHFDVVE--LGGAVAASLSKDSADAPAGLAVSVN 315
Query: 318 DSIVKVFAPEGEHFNFGE 335
+V+ +G + E
Sbjct: 316 --VVEELGADGYVYGTAE 331
>sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
>gi|282320|pir||E42400 ABC-type transport system
ATP-binding protein msmK [validated] - Streptococcus
mutans >gi|153741|gb|AAA26938.1| (M77351) ATP-binding
protein [Streptococcus mutans]
Length = 377
Score = 273 bits (691), Expect = 2e-72
Identities = 150/376 (39%), Positives = 229/376 (60%), Gaps = 19/376 (5%)
Query: 1 MVRIRLENIVKKFGN--FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
MV + L +I KK+ N ++++ +L+IK+ EF+ +GPSG GKST L VAG+ T G
Sbjct: 1 MVELNLNHIYKKYPNSSHYSVEDFDLDIKNKEFIVFVGPSGCGKSTTLRMVAGLEDITKG 60
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
+ D V + PKDR+I +VFQN+ALYPHM+VY N+AF L+LR K+ ID++V++ A
Sbjct: 61 ELKIDGEVVNDKAPKDRDIAMVFQNYALYPHMSVYDNMAFGLKLRHYSKEAIDKRVKEAA 120
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++L + + L+R P LSGGQ+QRVA+ RA+V++ +V L+DEPLSNLDA LR+ +RAE+ +
Sbjct: 121 QILGLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRAEIAK 180
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIRE----------GKILQVGTPDEVYYKPMYK 228
+ + +G TTIYVTHDQ EA+ +ADRI ++ G++ QVGTP E+Y +P K
Sbjct: 181 IHRRIGATTIYVTHDQTEAMTLADRIVIMSSTKNEDGSGTIGRVEQVGTPQELYNRPANK 240
Query: 229 FVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIER--LNVKDVIIGFRPHDA 286
FV GF+G+P MNF + ++DG L+ + I V + +++E K++I G RP D
Sbjct: 241 FVAGFIGSPAMNFFDVTIKDGHLVSKDGLTIAVTEGQLKMLESKGFKNKNLIFGIRPEDI 300
Query: 287 EVIKGISE-----GIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKL 341
+ E + EV E LG E ++ + + + + GEKV++
Sbjct: 301 SSSLLVQETYPDATVDAEVVVSELLGSETMLYLKLGQTEFAARVDARDFHEPGEKVSLTF 360
Query: 342 KEGSVVLFDKKSEKAL 357
FD ++E A+
Sbjct: 361 NVAKGHFFDAETEAAI 376
>pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding protein VC1552
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656059|gb|AAF94706.1| (AE004233)
glycerol-3-phosphate ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 393
Score = 273 bits (690), Expect = 3e-72
Identities = 143/315 (45%), Positives = 215/315 (67%), Gaps = 12/315 (3%)
Query: 2 VRIRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
V + ++ +VK + N A+ ++L I GEF+ L+GPSG GKS++L ++AG+ TSG I
Sbjct: 21 VMLDIKQLVKTYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEI 80
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ R V P +R+I +VFQN+ALYPHM+VY N+A+ L+ R K I K+ KVAK
Sbjct: 81 HLAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKT 140
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L IE+ LDR P +LSGGQ+QRVA+ RA+V++P++ L DEPLSNLDA LR +R E+K+LQ
Sbjct: 141 LKIEEYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQ 200
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ELG+T++YVTHDQ EA+ +ADRI V+++G+I QVGTP EVY++P FV F+G+P MN
Sbjct: 201 RELGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMN 260
Query: 241 FVEARVEDGKLLIS-ENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV--IKGISEGIV 297
F+ A ++ G+L I+ ++ Y+P + ++ +++ +G RP A + + E +
Sbjct: 261 FLPASIKQGQLHIAGKHCYLPQ-------FDAMSSENITLGIRPEHASLHPLTNAIE-LK 312
Query: 298 GEVYSFEPLGREQIV 312
++ EPLG Q+V
Sbjct: 313 LDIQVVEPLGPNQLV 327
>gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae]
Length = 373
Score = 272 bits (689), Expect = 4e-72
Identities = 155/359 (43%), Positives = 227/359 (63%), Gaps = 16/359 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + L+N+ K +G+ + N++LEI++GEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
Y E+ + ++ P R +G+VFQ++ALYPH+ +Y N++F L+L KA K EI ++V A++
Sbjct: 61 YIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LLDR P LSGGQ+QRVAI R LV +P V LLDEPLSNLDA LR+++R+E+ +LQ
Sbjct: 121 LQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
++LG T IYVTHDQ EA+ MAD+I V+ G + QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 RKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMN 240
Query: 241 FVEA---RVEDGKLLISENN----YIPVPKQYRQIIERLNVKDVIIGFRP-HDAEVIKGI 292
F+ VE ++ + +N +IPV ER++ +G RP H E G
Sbjct: 241 FMSVFIEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMS-----LGIRPEHLVEAEHGD 295
Query: 293 SEGIVGEVYSFEPLGREQIVTVSV--NDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
++ I G+V E LG E V +++ +DS V P+ G+ +TI + LF
Sbjct: 296 AK-IEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLF 353
>pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding protein VCA0946
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658383|gb|AAF96842.1| (AE004421)
maltose/maltodextrin ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 373
Score = 272 bits (689), Expect = 4e-72
Identities = 155/359 (43%), Positives = 227/359 (63%), Gaps = 16/359 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + L+N+ K +G+ + N++LEI++GEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
Y E+ + ++ P R +G+VFQ++ALYPH+ +Y N++F L+L KA K EI ++V A++
Sbjct: 61 YIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LLDR P LSGGQ+QRVAI R LV +P V LLDEPLSNLDA LR+++R+E+ +LQ
Sbjct: 121 LQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
++LG T IYVTHDQ EA+ MAD+I V+ G + QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 RKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMN 240
Query: 241 FVEA---RVEDGKLLISENN----YIPVPKQYRQIIERLNVKDVIIGFRP-HDAEVIKGI 292
F+ VE ++ + +N +IPV ER++ +G RP H E G
Sbjct: 241 FMSVFIEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMS-----LGIRPEHLVEAEHGD 295
Query: 293 SEGIVGEVYSFEPLGREQIVTVSV--NDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
++ I G+V E LG E V +++ +DS V P+ G+ +TI + LF
Sbjct: 296 AK-IEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLF 353
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 270 bits (683), Expect = 2e-71
Identities = 152/370 (41%), Positives = 228/370 (61%), Gaps = 20/370 (5%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V I +EN+VK++ + +++LEIK+GEF LLGPSG GK+TLL +AG G I
Sbjct: 3 VSISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIK 62
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
FD+ + +P RNIG+VFQN+A++PHMTV +N+ + L+LRK K+ + +KV ++ ++
Sbjct: 63 FDKDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKVDEMLHVV 122
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
IE+ DR P +LSGGQQQRVA+ARA+V P VLL+DEPLSNLDA LR+E+R+ +K +Q+
Sbjct: 123 KIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAIKDIQR 182
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
+GITT+YVTHDQ EALA++DRIAV++ G I QVG+P +Y +P FV F+G+ + +
Sbjct: 183 HVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGHSNLFY 242
Query: 242 VEARVEDGKLLISENNYIPVPKQYRQIIER-LNVKD---VIIGFRPHDAEVIKGISEGIV 297
++E + Y+ Y+ ++ L+VKD V++G RP + V EGI
Sbjct: 243 ATIKIE------GNDTYLLFRCGYKLKMDNLLDVKDGDEVVVGIRPEEFFVNSENDEGIK 296
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEH----------FNFGEKVTIKLKEGSVV 347
++ S LG+ + ND+ V P E+ + E +T+K +
Sbjct: 297 AKILSKTFLGKYTNYFLHFNDNEVVPDQPSIEYSQDSSYTDRMYEKDEVITLKPNANKIN 356
Query: 348 LFDKKSEKAL 357
+F EK+L
Sbjct: 357 VFTPDMEKSL 366
>emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [Streptomyces
coelicolor A3(2)]
Length = 378
Score = 270 bits (682), Expect = 2e-71
Identities = 133/273 (48%), Positives = 187/273 (67%), Gaps = 1/273 (0%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNI 77
A+D ++++I DGEF+ L+GPSG GKST L +AG+ G I +RDVT LPPKDR+I
Sbjct: 20 AVDGLDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDI 79
Query: 78 GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
+VFQN+ALYPHM+V N+ F L++ K EI +KV + AK+L + + LDR P LSGG
Sbjct: 80 AMVFQNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKPKALSGG 139
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
Q+QRVA+ RA+V+EP+V L+DEPLSNLDA LR+ R ++ LQ+ LGITT+YVTHDQ EA
Sbjct: 140 QRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEA 199
Query: 198 LAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENN 257
+ M DR+AV+++G + QV +P +Y KP FV GF+G+P MN VE + DG + N+
Sbjct: 200 MTMGDRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFG-NS 258
Query: 258 YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK 290
+PV + + + V +G RP +V++
Sbjct: 259 VVPVNRDALKAASDKGDRTVTVGVRPEHFDVVE 291
>pir||T45204 probable sugar ABC transporter ugpC [imported] - Mycobacterium
leprae >gi|699112|gb|AAA62878.1| (U15180) ugpC gene
product [Mycobacterium leprae]
Length = 392
Score = 270 bits (682), Expect = 2e-71
Identities = 143/302 (47%), Positives = 202/302 (66%), Gaps = 6/302 (1%)
Query: 1 MVRIRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M I LE++ K + N A+ ++++ + DGEF+ L+GPSG GK+T L +AG+ +SG
Sbjct: 1 MAEIVLEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ D V E PKDR+I +VFQ++ALYPHMTV +NIAFPL L K K EI +KV + A+
Sbjct: 61 LRIDGDRVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAKVKKAEIAQKVSETAQ 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L + LLDR P QLSGGQ+QRVA+ RA+V+ P+ L+DEPLSNLDA LR+ R E+ RL
Sbjct: 121 ILDLTDLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTRGEIARL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
Q+ LG TT+YVTHDQ EA+ + DR+ V+R G + Q+GTPDE+Y +P+ FV GF+G+P M
Sbjct: 181 QRRLGATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKD-VIIGFRPH---DAEVIKGISEG 295
NF A++ L + + + + + +I + V D VI+G RP DA++I G
Sbjct: 241 NFFPAKLTPNGLTLPLGE-LNLSRDVQAMIGQHPVPDRVIVGVRPEHLTDAKLIDAHQHG 299
Query: 296 IV 297
V
Sbjct: 300 TV 301
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 268 bits (678), Expect = 7e-71
Identities = 144/349 (41%), Positives = 214/349 (61%), Gaps = 12/349 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ LE I K + + L++INL I+ GEF +LLGPSGSGK+T++ +AG+ P G + +
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRIN 65
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D T LPP RN+G+VFQN AL+PH+ V++N+A+ L LRK P+ EI ++V + +++++
Sbjct: 66 GEDCTSLPPYRRNVGMVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRVYRYLELVNL 125
Query: 124 EKLL--DRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
+ + R QLSGGQQQRVAIARALV EP +LLLDEPL LD +R + +ELKR+QK
Sbjct: 126 DPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMISELKRIQK 185
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
LG T IYVTHDQ+EAL ++DR+AV+ EG+I Q+GTP E+Y +P +FV F+G NF
Sbjct: 186 TLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFVASFIGE--TNF 243
Query: 242 VEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVY 301
+EARV +G+++ ++ ++ I RP ++ + V
Sbjct: 244 LEARVVNGEVITEIGKV--------RVFGLDGAREFCISIRPEKLKINQQAENTFEAVVE 295
Query: 302 SFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
LG ++ + D +VK FAP E+ GE+V + V+ +
Sbjct: 296 EIGYLGSFLMLKLRAGDVVVKAFAPPQENVREGERVIVGWDSRDAVILE 344
>pir||MMECMK inner membrane protein malK - Escherichia coli
>gi|409797|gb|AAC43129.1| (U00006) cytoplasmic membrane
protein for maltose uptake [Escherichia coli]
>gi|1790467|gb|AAC77005.1| (AE000476) ATP-binding
component of transport system for maltose [Escherichia
coli K12]
Length = 371
Score = 268 bits (677), Expect = 9e-71
Identities = 141/324 (43%), Positives = 211/324 (64%), Gaps = 12/324 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L+N+ K +G + +INL+I +GEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ E+ + + PP +R +G+VFQ++ALYPH++V +N++F L+L A K+ I+++V +VA++
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LLDR P LSGGQ+QRVAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN 240
Query: 241 FVEARVE-------DGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGIS 293
F+ +V +L + + +P + R + N+ +G RP + I+
Sbjct: 241 FLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMS---LGIRPEHL-LPSDIA 296
Query: 294 EGIV-GEVYSFEPLGREQIVTVSV 316
+ I+ GEV E LG E + + +
Sbjct: 297 DVILEGEVQVVEQLGNETQIHIQI 320
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 266 bits (673), Expect = 3e-70
Identities = 129/235 (54%), Positives = 177/235 (74%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I ++NI K + +F AL+NINL++++GEF+++LGPSG GKSTLL +AG+ PT G I
Sbjct: 1 MGEISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ VT P R IG VFQN+AL+PH+TV+KN+A LELRK PKDE+ ++V K +M
Sbjct: 61 VIAGKQVTNDPVWKRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRVTKALRM 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ +E L DR P QLSGGQQQRVA+ARA+V +P+VLLLDEPLS LD LR +++ ELK LQ
Sbjct: 121 VQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVELKALQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
+ LG+TT++VTHDQ EAL+++DR+ V+ G I Q+ TPD +Y KP+ ++V F+G
Sbjct: 181 RTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIYNKPVSEYVARFVG 235
>sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|2052275|emb|CAA38188.1| (X54292) malK [Salmonella
typhimurium]
Length = 369
Score = 266 bits (673), Expect = 3e-70
Identities = 138/321 (42%), Positives = 206/321 (63%), Gaps = 8/321 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L N+ K +G+ + +INL+I DGEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ E + ++PP +R +G+VFQ++ALYPH++V +N++F L+L A K+ ++++V +VA++
Sbjct: 61 FIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVMNQRVNQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LL+R P LSGGQ+Q VAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN 240
Query: 241 FVEARV-----EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG 295
F+ +V E ++ + I +P + R + N+ +G RP
Sbjct: 241 FLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVGANMS---LGIRPEHLLPSDIADVT 297
Query: 296 IVGEVYSFEPLGREQIVTVSV 316
+ GEV E LG E + + +
Sbjct: 298 LEGEVQVVEQLGHETQIHIQI 318
>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
>gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
transport ATP-binding transport protein; SmoK
[Rhodobacter sphaeroides]
Length = 332
Score = 265 bits (671), Expect = 5e-70
Identities = 128/243 (52%), Positives = 171/243 (69%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +I L N+ K+FG + + +++L+I+DGEF+ +GPSG GKSTLL +AG+ + G+I
Sbjct: 1 MGKITLRNVQKRFGEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDVSDGQI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D RD TE+PP R + +VFQ++ALYPHMTV KNIAFPL + K EI+ +V AK+
Sbjct: 61 MIDGRDATEMPPAKRGLAMVFQSYALYPHMTVKKNIAFPLRMAKMEPQEIERRVSNAAKI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L++ LDR P QLSGGQ+QRVAI RA+V+EP L DEPLSNLDA LR+ +R E+ L
Sbjct: 121 LNLTNYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRVNMRLEITELH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ L T IYVTHDQ EA+ MAD+I V+ G+I QVG+P +Y P FV GF+G+P MN
Sbjct: 181 QSLETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTLYRNPANLFVAGFIGSPKMN 240
Query: 241 FVE 243
+E
Sbjct: 241 LIE 243
>sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
Length = 371
Score = 265 bits (670), Expect = 6e-70
Identities = 140/324 (43%), Positives = 210/324 (64%), Gaps = 12/324 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L+N+ K +G + +INL+I +GEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ E+ + + PP +R +G+VFQ++ALYPH++V +N++F L+ A K+ I+++V +VA++
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LLDR P LSGGQ+QRVAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN 240
Query: 241 FVEARVE-------DGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGIS 293
F+ +V +L + + +P + R + N+ +G RP + I+
Sbjct: 241 FLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMS---LGIRPEHL-LPSDIA 296
Query: 294 EGIV-GEVYSFEPLGREQIVTVSV 316
+ I+ GEV E LG E + + +
Sbjct: 297 DVILEGEVQVVEQLGNETQIHIQI 320
>pir||S77405 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1652587|dbj|BAA17508.1| (D90906) cytoplasmic
membrane protein for maltose uptake [Synechocystis sp.]
Length = 408
Score = 265 bits (669), Expect = 8e-70
Identities = 153/406 (37%), Positives = 223/406 (54%), Gaps = 48/406 (11%)
Query: 1 MVRIRLENIVKKF-----------GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTV 49
M ++ +EN+ K F G L INLEI DGEFM L+GPSG GKSTLL +
Sbjct: 1 MAQVIVENLYKSFPAQGKNKAKDGGTVNVLKAINLEIADGEFMVLVGPSGCGKSTLLRLI 60
Query: 50 AGIYKPTSGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAF----------- 98
AG+ T G I +R V +LPPK R+I +VFQ++ALYPH++VY NIAF
Sbjct: 61 AGLETVTGGNILIGDRRVNDLPPKARDIAMVFQSYALYPHLSVYDNIAFGLRRMLDRENN 120
Query: 99 -----------------------PLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLS 135
L A + + ++V +VA+ L I+ LLDR P QLS
Sbjct: 121 QTEDKFPRWVGDSLRGITKPLPKSLHYLSAQEKVLAQRVNQVAQQLQIDHLLDRLPKQLS 180
Query: 136 GGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQA 195
GGQ+QRVA+ RA+ + P+V L+DEPLSNLDA LR E R+++ ++Q++LG TTIYVTHDQ
Sbjct: 181 GGQKQRVALGRAIARNPQVFLMDEPLSNLDAKLRAETRSQIVQIQRQLGTTTIYVTHDQT 240
Query: 196 EALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISE 255
EA+ M DRIAV+ +G I Q+ P +Y +P +FVG F+G+PPMNF +V +L
Sbjct: 241 EAMTMGDRIAVLNQGVIQQIAPPLTLYNQPANRFVGEFIGSPPMNFFTLKVASASVLQHP 300
Query: 256 NNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSFEPLGREQIV--- 312
+ +P+++ ++ + +I+G RP S V E LG + +
Sbjct: 301 AFALNLPEKWHGLVAPYVGRSLILGVRPESFIPSTEGSNAFPVTVNLVEALGNDTFIYAH 360
Query: 313 TVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSEKALE 358
V+ D ++ GE++ + + + LFD K+E+A++
Sbjct: 361 LVTEPDLTIQARIAPDHPLQVGEQLWLTINPEKIHLFDAKTEQAID 406
>gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 324
Score = 264 bits (668), Expect = 1e-69
Identities = 150/338 (44%), Positives = 207/338 (60%), Gaps = 30/338 (8%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ L +IVKK+G I ++ I +I+ GEF +LGPSG GKSTLL +AGI K G+I D
Sbjct: 3 VELIDIVKKYGKNIVINGITEKIETGEFFVILGPSGEGKSTLLKILAGIEKLDKGKIIAD 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D+T+ PP+ RN+ +VFQN+ALYP+M+V NIAFPL++R K+EI E+V K AK+L I
Sbjct: 63 GADITDKPPEKRNVAMVFQNYALYPNMSVRDNIAFPLKMRGMKKEEIIERVEKAAKLLGI 122
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
++LD+ Q+SGGQQQRVA+ARA+V+ P LLDEPLSNLDA +R R ELKR+QKEL
Sbjct: 123 SEILDKKVTQISGGQQQRVALARAIVRNPSYFLLDEPLSNLDARVRTTARGELKRIQKEL 182
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
T IYVTHDQ EAL++ADRIA++ +GK QV P +Y P K+V F+G PMNF+
Sbjct: 183 KGTFIYVTHDQKEALSLADRIAILHKGKFEQVSDPKTLYEYPKTKWVAQFVGEFPMNFLP 242
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSF 303
E + K IGFRP EV KG + V S
Sbjct: 243 G-------------------------ELMKEKAQEIGFRPEWVEVGKG---NLSCMVESV 274
Query: 304 EPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKL 341
E G + + + ++ + + + E ++ G++V ++
Sbjct: 275 EASGESRYLICNFKNNNITILSQ--EFYDVGQEVRFEI 310
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 263 bits (666), Expect = 2e-69
Identities = 150/364 (41%), Positives = 231/364 (63%), Gaps = 25/364 (6%)
Query: 1 MVRIRLENIVKKF--GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
MVRI ++N+ K F G +ALDN+N+ I++GE +LGPSG+GK+T + +AG+ P++G
Sbjct: 1 MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTG 60
Query: 59 RIYFDERDVTE-----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEK 113
+YFD+R V +PP+DR IG+VFQ WALYP++T ++NIAFPL K K+EI ++
Sbjct: 61 ELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKR 120
Query: 114 VRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVR 173
V +VAK+L I +L+ +P +LSGGQQQRVA+ARALVK+P +LLLDEP SNLDA +R R
Sbjct: 121 VEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSAR 180
Query: 174 AELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGF 233
A +K +Q LG+T + V+HD A+ A+ADR+ V+ +GK++QVG P+++Y P+ V
Sbjct: 181 ALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASL 240
Query: 234 LGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDA----EVI 289
+G +N +E +V + ++I + PV ++ IIG RP D +VI
Sbjct: 241 IGE--INELEGKVTNEGVVIGSLRF-PV---------SVSSDRAIIGIRPEDVKLSKDVI 288
Query: 290 KGISEGIV--GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVV 347
K S +V G+V G +T++ DS ++F + GE+V + +++ +
Sbjct: 289 KDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIK 348
Query: 348 LFDK 351
+F+K
Sbjct: 349 VFEK 352
>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
Length = 269
Score = 263 bits (664), Expect = 3e-69
Identities = 130/251 (51%), Positives = 182/251 (71%), Gaps = 2/251 (0%)
Query: 1 MVRIRLENIVKKFGNFIA--LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
M + L N+ K +G+ +A L +I L+I GEF+ L+GPSG GKSTL+ +AG+ T G
Sbjct: 1 MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGG 60
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
I D +D++ + PKDR+I +VFQ++ALYP M+V +NIAF L++RK P+ IDE+V +VA
Sbjct: 61 AILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVA 120
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++L IE LL+R P QLSGGQQQRVA+ RAL + P+V L DE LSNLDA LR+E+R ELK
Sbjct: 121 RLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFDEQLSNLDAKLRVEMRTELKL 180
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPP 238
+ + L TT+YVTHDQ EA+ + D++AV+++G I Q GTP ++Y P FV F+G+PP
Sbjct: 181 MHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFGTPQQIYNDPDNLFVASFIGSPP 240
Query: 239 MNFVEARVEDG 249
MNF+ R++ G
Sbjct: 241 MNFIPLRLQRG 251
>gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport system ATP-binding;
UgpC [Halobacterium sp. NRC-1]
Length = 379
Score = 262 bits (663), Expect = 4e-69
Identities = 146/363 (40%), Positives = 215/363 (59%), Gaps = 6/363 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I L ++ K + + A+D I+L++ D EF+ ++GPSG GKST L +AG+ T+G I
Sbjct: 1 MSTITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLE-LRKAPKDEIDEKVRKVAK 119
DVT+ PP+DR+I +VFQN+ALYPHMT +N+ F ++ + EI+++V A
Sbjct: 61 RIGGTDVTDSPPEDRDIAMVFQNYALYPHMTAAENMTFGMQSVTDYSSAEIEDRVADAAA 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
L I +LLDR P LSGG++QRVAI RALV+EP V LLDEPLSNLDA LR+ +RAEL +L
Sbjct: 121 TLGITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMRAELSKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+EL TT+YVTHDQ EA+ + DR+AV+ +G + QV P ++Y P +FV GF+G P M
Sbjct: 181 HRELDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYDFPANQFVAGFIGEPAM 240
Query: 240 NFVEARVED-GKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHD----AEVIKGISE 294
N V RV D + L++++ P L + + G RP D G E
Sbjct: 241 NLVPVRVRDRPRGLVADHEGFAHPLPDGGSNSALVDRRLTFGVRPEDVLLAGRSATGHEE 300
Query: 295 GIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKSE 354
V EPLG + ++ ++ D ++V + G+ + + + + LFD ++
Sbjct: 301 SFEARVTVREPLGEQLLLHCTIGDDELQVKVQPRRDVSTGDTIRLCFDQQRLHLFDPETG 360
Query: 355 KAL 357
A+
Sbjct: 361 DAI 363
>pir||T03550 ATP-binding transport protein polk - Rhodobacter capsulatus
>gi|3128351|gb|AAC16203.1| (AF010496) ATP-binding
transport protein polk [Rhodobacter capsulatus]
Length = 332
Score = 262 bits (662), Expect = 5e-69
Identities = 148/351 (42%), Positives = 207/351 (58%), Gaps = 27/351 (7%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I L+ + K+FG+ + I+L I DGEF+ +GPSG GKSTLL +AG+ + G +
Sbjct: 1 MGEILLKGVTKRFGDVEVIPPIDLAINDGEFVVFVGPSGCGKSTLLRLIAGLEDVSGGVV 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D +D T P DR + +VFQ++ALYPHM+V KNIAFPL++ K P EI+ KV+ AK+
Sbjct: 61 EIDGKDATATAPADRGLAMVFQSYALYPHMSVKKNIAFPLKMAKLPAAEIEAKVQAAAKV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L++ LDR P QLSGGQ+QRVAI RA+V+ P+ L DEPLSNLDA LR+ +R E+ L
Sbjct: 121 LNLTAYLDRKPGQLSGGQRQRVAIGRAIVRNPQAFLFDEPLSNLDAALRVNMRLEISELH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
L T IYVTHDQ EA+ MAD+I V++ G+I QVG+P E+Y P +FV GF+G+P MN
Sbjct: 181 HSLKTTMIYVTHDQVEAMTMADKIVVLQAGRIEQVGSPLELYRTPRNRFVAGFIGSPKMN 240
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGI-VGE 299
F+E P+ +Q IG RP + +EG+ G
Sbjct: 241 FLEG-----------------PEAAKQGAH-------AIGIRPEHLRI--STTEGMWPGT 274
Query: 300 VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
V E LG + + V+ + ++ V A + G++V + G + FD
Sbjct: 275 VGVSEHLGSDTFLHVTTDHGLINVRAGGEVGLHHGDRVFLSPDMGQLHRFD 325
>pir||S05329 inner membrane protein malK - Salmonella typhimurium
Length = 369
Score = 262 bits (662), Expect = 5e-69
Identities = 136/321 (42%), Positives = 204/321 (63%), Gaps = 8/321 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L N+ K +G+ + +INL+I DGEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ E + ++PP +R +G+VFQ++ALYPH++V +N++F + A K+ ++++V +VA++
Sbjct: 61 FIGETRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFRPQAAGAKKEVMNQRVNQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LL+R P LSGGQ+Q VAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLERKPKALSGGQRQAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN 240
Query: 241 FVEARV-----EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG 295
F+ +V E ++ + I +P + R + N+ +G RP
Sbjct: 241 FLPVKVTATAIEQVQVELPNRQQIWLPVESRGVQVGANMS---LGIRPEHLLPSDIADVT 297
Query: 296 IVGEVYSFEPLGREQIVTVSV 316
+ GEV E LG E + + +
Sbjct: 298 LEGEVQVVEQLGHETQIHIQI 318
>gb|AAA93151.1| (U12007) MsiK [Streptomyces lividans]
Length = 314
Score = 261 bits (661), Expect = 7e-69
Identities = 133/273 (48%), Positives = 182/273 (65%), Gaps = 1/273 (0%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNI 77
A+D ++++I DGEF+ L+GPSG GKST L +AG+ G I +RDVT LPPKDR+I
Sbjct: 20 AVDGLDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDI 79
Query: 78 GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
+VFQN+ALYPHM+V N+ F L++ K EI +KV + AK+L + + LDR P LSGG
Sbjct: 80 AMVFQNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKPKALSGG 139
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
Q+QRVA+ RA+V+EP+V L+DEPLSNLDA LRL R ++ LQ+ LGITT+YVTHDQ EA
Sbjct: 140 QRQRVAMGRAIVREPQVFLMDEPLSNLDAKLRLSTRTQIASLQRRLGITTVYVTHDQVEA 199
Query: 198 LAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENN 257
+ M DR+A R QV +P +Y KP FV GF+G+P MN VE + DG + N+
Sbjct: 200 MTMGDRVASSRTVCSRQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFG-NS 258
Query: 258 YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK 290
+PV + + + V +G RP +V++
Sbjct: 259 VVPVNRDALKAASDKGDRTVTVGVRPEHFDVVE 291
>emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycobacterium leprae]
Length = 356
Score = 260 bits (658), Expect = 2e-68
Identities = 137/292 (46%), Positives = 193/292 (65%), Gaps = 9/292 (3%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNI 77
ALD ++L++ DGEF+ ++GPSG GK+T L VAG+ SG I +RDVT + PKDR++
Sbjct: 20 ALDRLDLDVDDGEFVVVVGPSGCGKTTSLRMVAGLETLDSGCIRIGDRDVTHVDPKDRDV 79
Query: 78 GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
+VFQN+ALYPHMTV +N+ F L++ K K EI +++ VAK+L ++ LDR P LSGG
Sbjct: 80 AMVFQNYALYPHMTVAQNLGFALKISKISKAEIHDRILVVAKLLDLQPYLDRKPKDLSGG 139
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
Q+QRVA+ RA+V+ P+V L+DEPLSNLDA LR + R ++ LQ +LG TT+YVTHDQ EA
Sbjct: 140 QRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRAQTRNQIAELQCQLGTTTVYVTHDQVEA 199
Query: 198 LAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENN 257
+ M DR+AV+ G + Q TP E+Y+KP FV GF+G+P MN V + D +L+ +
Sbjct: 200 MTMGDRVAVLCYGVLQQFATPRELYHKPENVFVAGFIGSPGMNLVTLSIVDSSVLLGDWP 259
Query: 258 YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSFEPLGRE 309
I +P++ +VIIG RP E+ S G+ E+ E LG +
Sbjct: 260 -IRIPREIASA-----ASEVIIGVRPEHFEL---GSLGVEVEIDMVEELGAD 302
>pir||E70952 probable sugC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695824|emb|CAA15894.1| (AL021006) sugC
[Mycobacterium tuberculosis]
Length = 393
Score = 260 bits (657), Expect = 2e-68
Identities = 135/284 (47%), Positives = 189/284 (66%), Gaps = 1/284 (0%)
Query: 1 MVRIRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M I L+++ K + + A+ ++NL I DGEF+ L+GPSG GK+T L +AG+ +SG
Sbjct: 1 MAEIVLDHVNKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ V E PKDR+I +VFQ++ALYPHMTV +NIAFPL L K K +I +KV + AK
Sbjct: 61 LRIAGERVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAKMRKADIAQKVSETAK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L + LLDR P QLSGGQ+QRVA+ RA+V+ P+ L+DEPLSNLDA LR+++R E+ +L
Sbjct: 121 ILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
Q+ LG TT+YVTHDQ EA+ + DR+ V+ G Q+GTP+E+Y +P FV GF+G+P M
Sbjct: 181 QRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRP 283
NF AR+ L + P+ I ++VI+G RP
Sbjct: 241 NFFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRP 284
>pir||S63613 probable ATP-binding protein cymD - Klebsiella oxytoca
>gi|854231|emb|CAA60003.1| (X86014) cymD [Klebsiella
oxytoca]
Length = 376
Score = 259 bits (655), Expect = 4e-68
Identities = 154/374 (41%), Positives = 216/374 (57%), Gaps = 20/374 (5%)
Query: 1 MVRIRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M + L I K++ N F A+ I+LEI DGEFM +GPSG KST L +AG+ + G
Sbjct: 1 MATVSLRKIEKRYENGFKAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLEDISGGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
IY R V +LPPKDR I +VFQN+ALYPH TV+ N+AF L+++K PKDEI +V A+
Sbjct: 61 IYIGNRKVNDLPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEIKRRVEDAAE 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVR---AEL 176
L I +LL R P ++SGGQ+QRVA+ RA+V++P+V L DEPLSNLDA LR+ +R A+L
Sbjct: 121 KLEITELLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDEPLSNLDAKLRVSMRMKIAQL 180
Query: 177 KRLQKELG--ITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
R KE G T IYVTHDQ EAL + DRI V+ G I+QV TP ++Y P KFV F+
Sbjct: 181 HRSLKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNIMQVDTPTDLYNYPNNKFVASFI 240
Query: 235 GNPPMNFVEARVEDGK----LLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK 290
G+P +N ++ + + I+ I +P + ++E K V G RP +
Sbjct: 241 GSPSINLIDTAIRKNNERLYVEIAPGVEILIPHSKQVLLEGYINKPVCFGIRPEHISLAS 300
Query: 291 -----GISEGIVGEVYSFEPLGREQIV--TVSVNDSIVKVFAPEGEHFNFGEKVTIKLKE 343
EG++ V E +G E+ + V + I +V + F+ G+ + L
Sbjct: 301 DDDDLNTFEGVLTVV---ENMGSEKFLYFIVGGKELIARVDTQDINPFHIGKTLRFNLNT 357
Query: 344 GSVVLFDKKSEKAL 357
+FD +E L
Sbjct: 358 AFCHVFDFYNENNL 371
>sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCJV
>gi|7442507|pir||A64881 probable ABC-type transport
protein b1318 - Escherichia coli
>gi|1742155|dbj|BAA14893.1| (D90769) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1742163|dbj|BAA14900.1| (D90770) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1787577|gb|AAC74400.1| (AE000229) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 322
Score = 258 bits (653), Expect = 6e-68
Identities = 136/320 (42%), Positives = 207/320 (64%), Gaps = 6/320 (1%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++ L++I K + N + + + NLEI D EF+ +GPSG GKST L +AG+ + + G
Sbjct: 1 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ D + + ++P K RNI +VFQN+ALYPHMTVY N+AF L+++K K+ IDE+V A+
Sbjct: 61 LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L + + L R P LSGGQ+QRVA+ RA+V+E V L+DEPLSNLDA LR+++RAE+ +L
Sbjct: 121 ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
++L T IYVTHDQ EA+ MA RI ++++G + QVG P VY +P FV GF+G+P M
Sbjct: 181 HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQII---ERLNVKDVIIGFRPHDAEVIKGISEGI 296
NF+ + DG ++E + +P++ ++ E L+ K +++G RP D I
Sbjct: 241 NFIRGTI-DGDKFVTETLKLTIPEEKLAVLKTQESLH-KPIVMGIRPEDIHPDAQEENNI 298
Query: 297 VGEVYSFEPLGREQIVTVSV 316
++ E G E ++ +V
Sbjct: 299 SAKISVAELTGAEFMLYTTV 318
>gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]
Length = 367
Score = 257 bits (651), Expect = 1e-67
Identities = 123/246 (50%), Positives = 175/246 (71%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++++N+ K F F + I+LE+ D EF+ +GPSG GKSTLL +AG+ + + G I
Sbjct: 1 MANLKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSEGTI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D RD+TE+ P R++ +VFQ +ALYPHM+V KN++F L+L K ++ KV + A++
Sbjct: 61 ELDGRDITEVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKQLVESKVNEAARI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LL+R P QLSGGQ+QRVAI RA+V+ P++ L DEPLSNLDA LR+++R EL RL
Sbjct: 121 LELGPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KEL T IYVTHDQ EA+ +AD++ V+ G+I QVG+P E+Y++P FV GFLG P M
Sbjct: 181 KELQATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFLGTPKMG 240
Query: 241 FVEARV 246
F++ +V
Sbjct: 241 FLKGKV 246
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 257 bits (651), Expect = 1e-67
Identities = 150/368 (40%), Positives = 219/368 (58%), Gaps = 18/368 (4%)
Query: 1 MVRIRLENIVKKFGNF-IALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M +++LE I K + N + + ++ E+ DGE M L+GPSG GKSTLL +AG+ +SG
Sbjct: 1 MAKVQLEAIRKVYDNGQVVVPGVSFEVADGELMVLVGPSGCGKSTLLRMIAGLEDISSGT 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ ER V ++PPKDRN+ +VFQ++ALYPHMT +N+AF L+LR + I E+++ VA+
Sbjct: 61 LRIGERVVNDVPPKDRNVAMVFQSYALYPHMTAAENLAFGLKLRGYSTEAIAERIKNVAE 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
ML + LLD P +SGGQ+QRVA+ RA+V+E V LLDEPLSNLDA LR VR+++ RL
Sbjct: 121 MLGLTSLLDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDAKLRNSVRSDITRL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
++LG T IYVTHDQ EA+ + RI ++++G I Q+ TP +Y P FV GFLGNP M
Sbjct: 181 HRKLGTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTPMVLYDHPANLFVAGFLGNPAM 240
Query: 240 NFVEARVE---DGKLLISENNYI-----PVPKQYRQIIERLNVKDVIIGFRPHDAEVIKG 291
N + R+E G L E+ +PK +DV++G RP G
Sbjct: 241 NMLPGRLEAVAGGMELHLESGECVMFVGAIPKSV------WFGRDVVLGVRPEHIRP-AG 293
Query: 292 ISEGIVGE--VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
+ E + E V + EP+G E + + + + P E GE + + ++ + +F
Sbjct: 294 LGEPVALEATVEALEPVGNEVFLHLRCGALALTLRVPPQELPGIGESLPLAVQPDRLHVF 353
Query: 350 DKKSEKAL 357
D S + L
Sbjct: 354 DAVSGECL 361
>sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDING PROTEIN UGPC
>gi|43249|emb|CAA31534.1| (X13141) ugpC protein (AA
1-356) [Escherichia coli]
Length = 356
Score = 255 bits (645), Expect = 5e-67
Identities = 141/353 (39%), Positives = 214/353 (59%), Gaps = 7/353 (1%)
Query: 1 MVRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++L+ + K + G + + L++ DGEF+ ++GPSG GKSTLL VAG+ + T G
Sbjct: 1 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
I+ +++ VTE+ PKDR I +VFQN+ALYPHM+V +N+A+ L++R K +I E+V++ A+
Sbjct: 61 IWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L ++ LL R P +LSGGQ+QRVA+ RA+V++P V L DEPLSNLDA LR+++R EL++L
Sbjct: 121 ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ L T++YVTHDQ EA+ +A R+ V+ G Q+GTP EVY KP FV F+G+P M
Sbjct: 181 HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM 240
Query: 240 NFVEARV--EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
N + RV E + +P+ YRQ R + +G RP + G+
Sbjct: 241 NLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGR----KMTLGIRPEHIALSSQAEGGVP 296
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
+ + E LG + + + + V E G + + L E + LFD
Sbjct: 297 MVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFD 349
>pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protein - Escherichia
coli >gi|912455|gb|AAB18425.1| (U00039) CG Site No.
17794 [Escherichia coli] >gi|1789859|gb|AAC76475.1|
(AE000421) ATP-binding component of sn-glycerol
3-phosphate transport system [Escherichia coli K12]
Length = 369
Score = 255 bits (645), Expect = 5e-67
Identities = 141/353 (39%), Positives = 214/353 (59%), Gaps = 7/353 (1%)
Query: 1 MVRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++L+ + K + G + + L++ DGEF+ ++GPSG GKSTLL VAG+ + T G
Sbjct: 14 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD 73
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
I+ +++ VTE+ PKDR I +VFQN+ALYPHM+V +N+A+ L++R K +I E+V++ A+
Sbjct: 74 IWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR 133
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L ++ LL R P +LSGGQ+QRVA+ RA+V++P V L DEPLSNLDA LR+++R EL++L
Sbjct: 134 ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL 193
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ L T++YVTHDQ EA+ +A R+ V+ G Q+GTP EVY KP FV F+G+P M
Sbjct: 194 HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM 253
Query: 240 NFVEARV--EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
N + RV E + +P+ YRQ R + +G RP + G+
Sbjct: 254 NLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGR----KMTLGIRPEHIALSSQAEGGVP 309
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
+ + E LG + + + + V E G + + L E + LFD
Sbjct: 310 MVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFD 362
>pir||E70943 probable ABC-type sugar transport protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2896775|emb|CAA17252.1|
(AL021899) hypothetical protein Rv2038c [Mycobacterium
tuberculosis]
Length = 357
Score = 253 bits (640), Expect = 2e-66
Identities = 138/292 (47%), Positives = 190/292 (64%), Gaps = 9/292 (3%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNI 77
ALD ++L + DGEF+ L+GPSG GK+T L VAG+ GRI ERDVTE+ PKDR++
Sbjct: 20 ALDRLDLIVGDGEFVVLVGPSGCGKTTSLRMVAGLETLDCGRIRIGERDVTEVDPKDRDV 79
Query: 78 GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
+VFQN+ALYPHMTV +N+ F L++ K K EI E+V AK+L ++ LDR P LSGG
Sbjct: 80 AMVFQNYALYPHMTVAQNMGFALKVAKIGKAEIRERVLAAAKLLDLQSYLDRKPKDLSGG 139
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
Q+QRVA+ RA+V+ P+V L+DEPLSNLDA LR + R ++ LQ++LG TT+YVTHDQ EA
Sbjct: 140 QRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRGQTRNQIAALQRQLGTTTVYVTHDQVEA 199
Query: 198 LAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENN 257
+ M DR+AV+ +G + Q +P E+Y P FV GF+G+P MN + D + + +
Sbjct: 200 MTMGDRVAVLSDGVLQQCASPRELYRNPGNVFVAGFIGSPAMNLFRLSIADSTVSLGDWQ 259
Query: 258 YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSFEPLGRE 309
I +P R ++ +VIIG RP E+ GI +V E LG +
Sbjct: 260 -ILLP---RAVVG--TAAEVIIGVRPEHLEL---GGAGIEMDVDMVEELGAD 302
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 253 bits (639), Expect = 3e-66
Identities = 146/364 (40%), Positives = 214/364 (58%), Gaps = 22/364 (6%)
Query: 1 MVRIRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
M IR+EN+ K F A+DN+++ I G +LGPSG GK+T L +AG+ +PT
Sbjct: 1 MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60
Query: 57 SGRIYFDERDVTE-----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEID 111
SG IYFD V+ + P+ R I +VFQNWALYP+MTV+ NIAFPL+L K PKD+I+
Sbjct: 61 SGYIYFDNEAVSSPRRVMMSPEKRGIAMVFQNWALYPNMTVFDNIAFPLKLAKVPKDKIE 120
Query: 112 EKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLE 171
KV++V++ L + +L+RYP +LSGGQ QR AIARALVK+P+VLLLDEP SNLDA +R
Sbjct: 121 NKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDAQIRES 180
Query: 172 VRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVG 231
RA ++++Q+E +TT+ V+HD A+ A+A++ VI GK Q+GTP E+Y P +
Sbjct: 181 ARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEIYEYPATDLIA 240
Query: 232 GFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVI-- 289
G +N ++A++ + +I+ N +P+ +E +++IG RP D +
Sbjct: 241 RLTGE--INLIQAKIIENNAIIA-NLKVPLNN-----MELKGQSNIVIGLRPDDLTLSDT 292
Query: 290 ---KGISEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSV 346
K I GIV G +IV + D + + E G + + K V
Sbjct: 293 LLDKYIDMGIVKVKLVSYGAGIFKIVVSPITDENIDIIVDAEEPLETGIETHLLAKPNKV 352
Query: 347 VLFD 350
+FD
Sbjct: 353 KIFD 356
>gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other inner membrane ATP
binding transport proteins [Escherichia coli]
Length = 322
Score = 253 bits (639), Expect = 3e-66
Identities = 134/320 (41%), Positives = 205/320 (63%), Gaps = 6/320 (1%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++ L++I K + N + + + NLEI D EF+ + SG GKST L +AG+ + + G
Sbjct: 1 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVAASGCGKSTTLRMIAGLEEISGGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ D + + ++P K RNI +VFQN+ALYPHMTVY N+AF L+++K K+ IDE+V A+
Sbjct: 61 LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L + + L R P LSGGQ+QRVA+ RA+V+E V L+DEPLSNLDA LR+++RAE+ +L
Sbjct: 121 ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
++L T IYVTHDQ EA+ MA RI ++++G + QVG P VY +P FV GF+G+P M
Sbjct: 181 HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAM 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQII---ERLNVKDVIIGFRPHDAEVIKGISEGI 296
NF+ + DG ++E + +P++ ++ E L+ K +++G RP D I
Sbjct: 241 NFIRGTI-DGDKFVTETLKLTIPEEKLAVLKTQESLH-KPIVMGIRPEDIHPDAQEENNI 298
Query: 297 VGEVYSFEPLGREQIVTVSV 316
++ E G E ++ +V
Sbjct: 299 SAKISVAELTGAEFMLYTTV 318
>pir||T47062 hypothetical protein [imported] - Yersinia pestis
>gi|4106650|emb|CAA21405.1| (AL031866) ORF80, len=296
aa, 59.6% identity in 265 aa overlap with MalK E. coli
(371 aa), Fasta scores: opt: 1024, E(): 0 [Yersinia
pestis]
Length = 296
Score = 252 bits (637), Expect = 5e-66
Identities = 126/256 (49%), Positives = 174/256 (67%), Gaps = 7/256 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M IRL N+ K+F + ++ ++LEIK+GEF +GPSG GKSTLL +AG+ +SG I
Sbjct: 1 MSGIRLSNVFKRFHDTQVINQVDLEIKNGEFCVFIGPSGCGKSTLLRMIAGLETISSGEI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
++ V +L P DR + +VFQ++ALYPHMT+Y N+AF L+L K EI+ +V AK+
Sbjct: 61 SIGDKVVNKLAPADRGVAMVFQSYALYPHMTIYDNMAFNLKLAKTEPAEIERRVLNAAKI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L +E LL R P LSGGQ+QRVAI RA+V+ P+V L DEPLSNLDA LR+ R E+ +L
Sbjct: 121 LQLELLLQRLPKALSGGQRQRVAIGRAIVRNPDVFLFDEPLSNLDASLRVATRVEIAKLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRI-------AVIREGKILQVGTPDEVYYKPMYKFVGGF 233
+LG T +YVTHDQ EA+ +AD+I A++ EG I Q G P E+Y+ P+ +FV GF
Sbjct: 181 HQLGNTMVYVTHDQVEAMTLADKIVLLNSGAAMLNEGSIAQTGHPLELYHHPVNEFVAGF 240
Query: 234 LGNPPMNFVEARVEDG 249
+G+P MNF+ + G
Sbjct: 241 IGSPKMNFLSGELVAG 256
>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
Length = 342
Score = 252 bits (636), Expect = 6e-66
Identities = 125/243 (51%), Positives = 172/243 (70%), Gaps = 1/243 (0%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L +I K FG F + +++EIK GEFM +GPSG GKSTLL +AG+ + TSG +
Sbjct: 1 MAELQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
FD + V +L P R I +VFQ++ALYPHMTVY+N+AF ++L K + ++V A+M
Sbjct: 61 AFDGQIVNQLTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRVEAAAEM 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + L+R P QLSGGQ+QRVAI RA+V++P+V L DEPLSNLDA LR+ R E+ +L
Sbjct: 121 LQLTPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIAKLH 180
Query: 181 KELGITT-IYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ + TT IYVTHDQ EA+ +ADRI V+R+G + Q+GTP E+Y P FV GF+G+P M
Sbjct: 181 RSMHKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGFIGSPKM 240
Query: 240 NFV 242
NF+
Sbjct: 241 NFL 243
>sp|P18813|MALK_ENTAE MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|78246|pir||S05328 inner membrane protein malK -
Enterobacter aerogenes (fragment)
Length = 294
Score = 251 bits (634), Expect = 1e-65
Identities = 123/246 (50%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L N+ K +G+ + +INLEI+DGEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLRNVTKAWGDVVVSKDINLEIQDGEFVVFVGPSGCGKSTLLRMIAGLETVTSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ + + ++PP +R IG+VFQ++ALYPH++V +N++F L+L A K+ I+++V +VA++
Sbjct: 61 FIGDTRMNDVPPAERGIGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVTQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LL+R LSGGQ+ VAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLERNRKALSGGQRPGVAI-RTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH 179
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P E+Y+ P +FV GF+G+P MN
Sbjct: 180 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN 239
Query: 241 FVEARV 246
F+ +V
Sbjct: 240 FLPVKV 245
>dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 378
Score = 251 bits (634), Expect = 1e-65
Identities = 143/364 (39%), Positives = 218/364 (59%), Gaps = 12/364 (3%)
Query: 1 MVRIRLENIVKKFGNF-IALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M + L N+ K + A+++IN+ IK+GEF L+GPSG GKST+L +AG+ ++G
Sbjct: 1 MSHVELLNLCKSYDQTTFAVEDINVSIKEGEFFILVGPSGCGKSTMLRMIAGLEDISAGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ LPP RN+ +VFQN+ALYPH+TV +NI F L++RK K E E+ ++ A
Sbjct: 61 LKIHGATANHLPPSKRNLSMVFQNYALYPHLTVEENILFGLKVRKVKKAERSERCQRAAA 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
ML + L R P +LSGGQ+QRVA+ARA+V E + L+DEPLSNLDA LR +R E+++L
Sbjct: 121 MLGLTDYLKRKPRELSGGQRQRVALARAVVSEAPLCLMDEPLSNLDAKLRGHMRTEIRQL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
Q++LG+T IYVTHDQ EA+ M DRI V+++G++ QVG+P ++Y P FV F+G PPM
Sbjct: 181 QRQLGMTMIYVTHDQVEAMTMGDRIMVLKDGQVQQVGSPLDIYNAPANLFVATFIGAPPM 240
Query: 240 NFVEARVED-GKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPH-----DAEVIKGIS 293
N +A V+ + L + +P+ + Q++ R++ V +G RP DA + +
Sbjct: 241 NIAKATVDRMNRELAIGSLRLPIEE---QLLMRISSDTVQLGIRPEQIARADAPTPEHVQ 297
Query: 294 EGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFDKKS 353
+ + + E LG E ++ V + K + E + I + + LFD ++
Sbjct: 298 WHVT--LTNVEVLGNETLLAFKVGEHEWKAKWLGQWPYQLHETIAISFAKEHLYLFDGET 355
Query: 354 EKAL 357
K L
Sbjct: 356 GKTL 359
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 251 bits (634), Expect = 1e-65
Identities = 125/240 (52%), Positives = 170/240 (70%), Gaps = 2/240 (0%)
Query: 3 RIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
++ L NI K +G F + +++L I+ GEF +LGPSG+GKSTLL + GI +P SG+I
Sbjct: 4 KLELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGKIII 63
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
D +DVT+LPP RNI +VFQN+ALYP+M V+ NIAFPL + I +V + A+ L
Sbjct: 64 DGKDVTKLPPNKRNIAMVFQNYALYPNMNVFDNIAFPLRMNHFRN--ISRRVHETAQKLG 121
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
IE LLD+ Q+SGGQQQRVA+ARA+V+ P + LLDEPLSNLDA +R R ELK++Q+E
Sbjct: 122 IENLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNELKKIQQE 181
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
L T ++VTHDQ EA A+ DRI V+ GK Q+G+ +E+Y P +VG F+G+ PMNF+
Sbjct: 182 LDQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELYNDPKTVWVGDFIGDYPMNFI 241
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 250 bits (631), Expect = 2e-65
Identities = 122/243 (50%), Positives = 175/243 (71%), Gaps = 2/243 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ ++N+ K F +F L N++L+IK GEF ++LGPSG GK+TLL +AG SG + D
Sbjct: 6 VSIKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLLD 65
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+ + LPP R + ++FQN+AL+PH+TV++NIAFPL+L+K ++EI+++V ++ ++ +
Sbjct: 66 GKSILNLPPNKRPVNIIFQNYALFPHLTVFENIAFPLKLKKLSENEINQRVNELLSLIRM 125
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E+ + P QLSGGQ+QRVAIARAL EP VLLLDEPLS LDA LR E+ EL L +
Sbjct: 126 EEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDNLHDRV 185
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT IYVTHDQAEA++++DR+A++ EG+I+QVGTP EVY P+ F F+G N ++
Sbjct: 186 GITFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYESPVNVFAATFIGE--TNLMK 243
Query: 244 ARV 246
A V
Sbjct: 244 AEV 246
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 249 bits (628), Expect = 5e-65
Identities = 151/374 (40%), Positives = 228/374 (60%), Gaps = 35/374 (9%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I L +I K +G+ + + NL I +GEF+ +LGPSG GK+T+L +AG+ + SG I D
Sbjct: 11 IELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIILD 70
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D+T +P + R++ VFQ++AL+PHMT+++N+AF L ++K P+ EI +V + +M+ +
Sbjct: 71 GEDITNVPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLEALRMVQL 130
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E++ DR P QLSGGQQQR+AIARA+V +P+VLLLDE LS LD LR +++ ELK LQ++L
Sbjct: 131 EEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELKVLQRQL 190
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT I+VTHDQ EA+ M+DRI ++R+GKI Q G+P E+Y +P FV F+G +N +
Sbjct: 191 GITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEEPANLFVARFIGE--INVFD 248
Query: 244 ARVEDGKLLISEN------------NYIPVP-KQYRQIIERLNVKDVIIGFRPHDAEVIK 290
A V + K SEN Y +P K+ +Q+ L +D++I + E K
Sbjct: 249 ATVIERK---SENVVLANVEGRVCDIYTDIPVKKDQQLQVLLRPEDIVIK-ELDEHEHSK 304
Query: 291 GISEGIVGEVY---------SFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKL 341
I I+ Y FE G+ +V+ N+ P +H + G++V I
Sbjct: 305 AIIGHIIDRTYKGMTLESTVEFEQNGKRGLVSEFFNED-----DPHMDH-SIGQRVGITW 358
Query: 342 KEG-SVVLFDKKSE 354
EG VVL D+ ++
Sbjct: 359 HEGWEVVLNDEDNQ 372
>pir||C83353 probable ATP-binding component of ABC maltose/mannitol transporter
PA2341 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9948377|gb|AAG05729.1|AE004660_5 (AE004660)
probable ATP-binding component of ABC maltose/mannitol
transporter [Pseudomonas aeruginosa]
Length = 370
Score = 249 bits (628), Expect = 5e-65
Identities = 118/246 (47%), Positives = 170/246 (68%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +++ N+ K F + I+L+++D EF+ +GPSG GKSTLL +AG+ + + G I
Sbjct: 1 MADLKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLEEASGGSI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D D+T+ PP R++ +VFQ +ALYPHMTV +N++F L+L K E+ KV A++
Sbjct: 61 ALDGTDITDTPPAKRDLAMVFQTYALYPHMTVRRNLSFALDLAGVDKREVAAKVDAAARI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L ++ LL+R P QLSGGQ+QRVAI RA+V+ P++ L DEPLSNLDA LR+++R EL RL
Sbjct: 121 LELQALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+EL T IYVTHDQ EA+ +AD++ V+ G++ QVG+P E+Y+ P FV GFLG P M
Sbjct: 181 QELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLELYHHPANLFVAGFLGTPKMG 240
Query: 241 FVEARV 246
F+ +
Sbjct: 241 FLRGHL 246
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 248 bits (627), Expect = 7e-65
Identities = 145/349 (41%), Positives = 214/349 (60%), Gaps = 20/349 (5%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + N+ K+FG+F AL +INLE+ DG+ +ALLGPSGSGKSTLL +AG+ +P G+I +
Sbjct: 3 IIINNVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIIN 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+D T + + RNIG VFQ++AL+ H+T+ +NIAF LE+RK P + E+V ++ ++ +
Sbjct: 63 GQDATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSLIQL 122
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E L +RYP QLSGGQ+QRVA+ARAL +P+VLLLDEP LDA +R E+RA L++L E+
Sbjct: 123 EGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHDEV 182
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
+T+++VTHDQ EA+ +AD I V+ GKI QVGT +E+Y P FV GF+G +N +
Sbjct: 183 HLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEHPASPFVMGFIGE--VNVLP 240
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE-GIVGEVYS 302
L + + + P N + RPHD E++ + + G +
Sbjct: 241 RNAS----LFNYHAFEPHSSN--------NGHQEPVFVRPHDFELLTEADDASVAGTIKR 288
Query: 303 FEPLGREQIVTVSVNDS---IVKVFAPEGEHFN--FGEKVTIKLKEGSV 346
LG E V V + D+ + + +G+ N G+KV IK + V
Sbjct: 289 VIHLGSEIQVEVLLMDNTAVLAYLNREQGQQLNPKAGKKVFIKPRVAKV 337
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 248 bits (626), Expect = 9e-65
Identities = 147/364 (40%), Positives = 229/364 (62%), Gaps = 21/364 (5%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
IRL I K F + N+NL++ GEF+ +LGPSG GK+T+L +AG G+I D
Sbjct: 18 IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
++DVT++P + R++ VFQ++AL+PHMTV++N+AF L ++K P+ EI+ +V + +M+ +
Sbjct: 78 DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
++ R P QLSGGQQQR+AIARA+V +P+VLLLDE LS LD LR ++++ELK+LQ++L
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT I+VTHDQ EAL+M+DRI V+R GKI Q G+P E+Y P FV F+G +N +
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGE--INVFQ 255
Query: 244 A----RVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHD---AEVIKGISEGI 296
A R+++ ++ + I Y ++ + V++ RP D E+ + +GI
Sbjct: 256 ATTIDRIDEKRIRVDIEG-IESIVYYEDEVKAGDKLQVLL--RPEDLRIEEIKESEEKGI 312
Query: 297 VGEV--YSFEPLGREQIVTVSVNDSI-VKVF----APEGEHFNFGEKVTIKLKEG-SVVL 348
VG V +++ + E +V + + V F P+ +H + G+KV + E VVL
Sbjct: 313 VGHVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDH-SIGQKVAVTWVESWEVVL 371
Query: 349 FDKK 352
D++
Sbjct: 372 NDEQ 375
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 247 bits (625), Expect = 1e-64
Identities = 118/234 (50%), Positives = 174/234 (73%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
L+NI K+FG+ + N++LEIK G + LLGPSG GK+T+L VAG+ KPTSG+I+ D
Sbjct: 9 LKNICKRFGSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGE 68
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
DVTE + R+I +VFQ++AL+PHM++Y+N+A+ L++ K P +E+ ++V + K++ +E
Sbjct: 69 DVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEALKIVDLEG 128
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
+ +RY Q+SGGQQQRVA+ARALV +P+VLL DEPLSNLDA LR +R ++ LQ+ I
Sbjct: 129 MGERYVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQRFDI 188
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
T++YVTHDQAEA A++D + V+++G I+Q+GTP E+Y P F+ F+G M
Sbjct: 189 TSLYVTHDQAEAFAVSDTVIVMKQGDIMQIGTPQELYKAPKSMFMANFMGEANM 242
>pir||T34595 ABC-transporter ATP-binding protein - Streptomyces coelicolor
>gi|2815336|emb|CAA16460.1| (AL021529) SC10A5.28c,
ABC-transporter ATP-binding protein, len : 361 aa;
similar to many eg. Streptomyces reticuli TR:P964 83
(EMBL:Y08921) MSIK PROTEIN involved in in cellobiose and
maltose transport(377 aa), opt: 809 z-score: 1069.1 E():
0 , 40.4% i>
Length = 361
Score = 247 bits (624), Expect = 2e-64
Identities = 131/252 (51%), Positives = 168/252 (65%), Gaps = 8/252 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG-- 58
M + +ENI K F L+++N + DGEF LLGPSG GKST L VAG+ P SG
Sbjct: 1 MPELVVENIKKSFHGTAVLEDVNFTVADGEFFTLLGPSGCGKSTTLSCVAGLETPDSGTI 60
Query: 59 ----RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
+++FD + +PP+ RN+GLVFQ++AL+PHMTV N+A PL+LRK K E +
Sbjct: 61 RVGDQVFFDGTRRSTVPPEGRNLGLVFQSYALWPHMTVADNLALPLKLRKVTKGEQRRLI 120
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
V + + L DRYP QLSGGQQQRVA+AR +V P VLLLDEPLSNLDA +R + R
Sbjct: 121 DDVLTKVDMAHLRDRYPHQLSGGQQQRVALARGIVYSPGVLLLDEPLSNLDAKMRDQARV 180
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
LK LQ+E+GITT+YVTHDQ EA++++DRIAV G + QVGTP E+Y P V GF+
Sbjct: 181 WLKDLQREVGITTVYVTHDQVEAMSLSDRIAVFMHGHLQQVGTPTEIYETPATPEVAGFI 240
Query: 235 GNPPMNFVEARV 246
G N +E RV
Sbjct: 241 GR--CNLLEGRV 250
>pir||F71279 probable sugar ABC transporter, ATP-binding protein (ugpC) -
syphilis spirochete >gi|3323114|gb|AAC65771.1|
(AE001251) sugar ABC transporter, ATP-binding protein
(ugpC) [Treponema pallidum]
Length = 387
Score = 246 bits (622), Expect = 3e-64
Identities = 137/370 (37%), Positives = 214/370 (57%), Gaps = 14/370 (3%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M ++ L++I K + + A+ ++ + + GEF+ +GPSG GKST L +AG+ SG
Sbjct: 1 MAKVELKHICKTYHGCVHAVKDVTITAESGEFVVFIGPSGCGKSTALRIIAGLEDICSGD 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+Y D + + PKDRNI +VFQN+ALYPHM V+ N+AF L +RK P+ EI +V + A+
Sbjct: 61 LYIDGEHMNHVTPKDRNIAMVFQNYALYPHMNVFDNMAFGLRIRKIPQQEIIRRVHEAAR 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L IE LL R P LSGGQ+QRVA+ RA+V+ P+V L DEPLSNLDA LR+++R+E+ L
Sbjct: 121 VLDIEPLLARKPKALSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSEISLL 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
K L T IYVTHDQ EA+ MAD+I ++++G + Q+G+P +Y P FV F+G+PPM
Sbjct: 181 HKRLKATMIYVTHDQMEAMTMADKIVIMKDGCVQQIGSPLHIYQHPANTFVAQFIGSPPM 240
Query: 240 NFVEARV--EDGKLLISENNYI---PVPKQYRQIIERLNVKDVIIGFRPH------DAEV 288
N + ++ + I ++ +P + +++ V+ G RP + +
Sbjct: 241 NCFPVTIVKDEHGIKIDAGLFVLRPDIPASF--LLKNYIGTQVVFGLRPEAITPRTEETL 298
Query: 289 IKGISEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVL 348
+ + I +V + E LG E V + + + G +T+ L +
Sbjct: 299 ARECANVIQLKVLAVEALGAETFVYLDAGVQPIVARCNHTLTAHEGTLLTLALDLSKALY 358
Query: 349 FDKKSEKALE 358
FD ++ AL+
Sbjct: 359 FDAETGHALQ 368
>gi|11467821 probable transport protein [Nephroselmis olivacea]
>gi|5880750|gb|AAD54843.1|AF137379_66 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 343
Score = 246 bits (622), Expect = 3e-64
Identities = 121/233 (51%), Positives = 170/233 (72%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I +ENI K FG F ALD++NLE+K G +AL+GPSGSGKSTLL +AG+ + G+I+
Sbjct: 3 ILIENISKTFGTFRALDHVNLEVKAGSLVALVGPSGSGKSTLLRMIAGLERADEGKIWLA 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
RD T P + R+IG VFQN+AL+ H+ V KNI+F LE+R+A ++I +VR + +++ +
Sbjct: 63 GRDATYAPIQKRHIGFVFQNYALFKHLNVAKNISFGLEVRQANPNQIRSRVRDLLQLIQL 122
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E + DRYP QLSGGQ+QRVA+ARAL EP+VLLLDEP LDA +R E+R+ L+ L +E+
Sbjct: 123 EHMADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDARVRRELRSWLRDLHQEM 182
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
+TT++VTHDQ EA+ +A I V +G++ QVG+P E+Y P FV GF+G+
Sbjct: 183 PVTTVFVTHDQQEAMEVAHEIVVFNQGRLEQVGSPQEIYDHPATPFVMGFMGH 235
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 245 bits (620), Expect = 4e-64
Identities = 147/370 (39%), Positives = 226/370 (60%), Gaps = 27/370 (7%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I L +I K +G+ +++ NL I +GEF+ +LGPSG GK+T+L +AG+ + SG I D
Sbjct: 20 IELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIILD 79
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D+T +P + R+I VFQ++AL+PHMT+++N+AF L ++K P +EI +V + +M+ +
Sbjct: 80 GEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQL 139
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E++ DR P QLSGGQQQR+AIARA+V +P+VLLLDE LS LD LR +++ ELK LQ++L
Sbjct: 140 EEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQELKMLQRQL 199
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT I+VTHDQ EA+ M+DRI ++R+GKI Q G+P E+Y P FV F+G +N E
Sbjct: 200 GITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEDPANLFVARFIGE--INVFE 257
Query: 244 ARVEDGK---LLISE------NNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE 294
A V + K ++++ + Y +P + Q ++ L + I+ + E K I
Sbjct: 258 ATVIERKSEQVVLANVEGRICDIYTDMPVEKDQKLQVLLRPEDIVIEELDENEHSKAIIG 317
Query: 295 GIVGEVY---------SFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEG- 344
I+ Y F+ G +V+ N+ P +H + G++V I EG
Sbjct: 318 HIIDRTYKGMTLESTVEFDHNGMRVLVSEFFNED-----DPHMDH-SIGQRVGITWHEGW 371
Query: 345 SVVLFDKKSE 354
VVL D+ ++
Sbjct: 372 EVVLNDEDNQ 381
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 245 bits (620), Expect = 4e-64
Identities = 138/305 (45%), Positives = 194/305 (63%), Gaps = 10/305 (3%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
+ ++VK+FG+F AL I+L I+ GEF+ LGPSG GK+TLL +AG+ PTSG I+ +++
Sbjct: 37 IRHVVKQFGSFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDLPTSGTIHQNQQ 96
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
+T LPP+ R+ G+VFQ++AL+P++TV +NIA L + + EKV + +M+ +
Sbjct: 97 AITFLPPEQRDFGIVFQSYALFPNLTVEENIAIGLRNQGMSVRDALEKVEQWLEMIGLAT 156
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
+YP QLSGGQQQRVA+ARAL P +LLLDEPLS LDA +R +R E+ +LQ++LGI
Sbjct: 157 SAQKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQLQRKLGI 216
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
TTI VTHDQ EAL MADRI V+ G I QVGTP E+Y KP +FV F+G MNF+
Sbjct: 217 TTIMVTHDQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVGT--MNFIPVS 274
Query: 246 VEDGKLLISENNYIPVPKQYRQIIERLNV---KDVIIGFRPHDAEVIKGISEGIVGEVYS 302
+ + L + I +PK IE + + RP + E++ +E I +
Sbjct: 275 MASSQQLRIAESLIALPK-----IENYTPCQGEQFDLAVRPENLELVTRYNEAIPVVIRH 329
Query: 303 FEPLG 307
E LG
Sbjct: 330 LEFLG 334
>pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648888|emb|CAB03654.1| (Z81331) ugpC [Mycobacterium
tuberculosis]
Length = 360
Score = 245 bits (618), Expect = 8e-64
Identities = 133/295 (45%), Positives = 186/295 (62%), Gaps = 10/295 (3%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNIG 78
+DN++L+I DGEF+ L+GPSG GKST L +AG+ SGRI + DVT LPP+ R++
Sbjct: 21 VDNLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESGRISIGDVDVTHLPPRARDVA 80
Query: 79 LVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQ 138
+VFQN+ALYP+MTV N+ F L + + +V +VA ML + LLDR P +LSGGQ
Sbjct: 81 MVFQNYALYPNMTVAANMGFALRNAGMSRADTRRRVLEVADMLELTDLLDRKPAKLSGGQ 140
Query: 139 QQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEAL 198
+QRVA+ RA+V+ P V +DEPLSNLDA LR+ R+++ LQ+ LG TT+YVTHDQ EA+
Sbjct: 141 RQRVAMGRAIVRRPRVFCMDEPLSNLDAKLRVSTRSQISGLQRRLGTTTVYVTHDQVEAM 200
Query: 199 AMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENNY 258
M DR+AV+++G + QV TP +Y P+ FV F+G P MN ++A V G ++ + +
Sbjct: 201 TMGDRVAVLKDGVLQQVDTPRALYDDPVNTFVATFIGAPAMNLIDAAVAHG-VVRAPDLA 259
Query: 259 IPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK-GISEGIVGEVYSFEPLGREQIV 312
IPVP + V++G RP +V G + V E LG E V
Sbjct: 260 IPVPDP--------AAERVLVGVRPESWDVASIGTPGSLTVHVELVEELGFESFV 306
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 245 bits (618), Expect = 8e-64
Identities = 119/232 (51%), Positives = 170/232 (72%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I +ENI K+FG+F ALD +NLEIK+G + LLGPSGSGKSTLL +AG+ KP SGRI+ +
Sbjct: 3 ILIENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLE 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+D T++ +DR IG VFQN+AL+PH+TV +N+AF LE++K ++V ++ K++ +
Sbjct: 63 GQDATQMKLQDREIGFVFQNYALFPHLTVSENVAFGLEIQKIDSLLKKKRVNELLKLMQL 122
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
EK D YP QLSGGQ+QRVA+ARAL EP+VLLLDEP + LDA +R ++R+ L+ L ++
Sbjct: 123 EKFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLRELHHKI 182
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
+TT++VTHD +EA+ +A I ++ GKI+Q+G+ E+ P FV FLG
Sbjct: 183 SVTTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQELSDHPTNTFVTNFLG 234
>sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK >gi|420867|pir||S34734
ATP-binding protein lacK - Agrobacterium radiobacter
Length = 363
Score = 244 bits (617), Expect = 1e-63
Identities = 121/246 (49%), Positives = 165/246 (66%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +RL +I K +G+ + +NLE+ GEF+ +GPSG GKSTLL +AG+ +SG +
Sbjct: 1 MAEVRLTDIRKSYGSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIAGLEDISSGEL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ ++ P R I +VFQ +ALYPHMTV +N+ F L KDEI+ +V AK+
Sbjct: 61 TIGGTVMNDVDPSKRGIAMVFQTYALYPHMTVRENMGFALRFAGMAKDEIERRVNAAAKI 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L ++ L+DR P LSGGQ+QRVAI RA+V++P+V L DEPLSNLDA LR+ +R E+ RL
Sbjct: 121 LELDALMDRKPKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRVEIARLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
KEL T +YVTHDQ EA+ +AD+I V+R G + QVG P +Y P FV GF+G+P MN
Sbjct: 181 KELNATIVYVTHDQVEAMTLADKIVVMRGGIVEQVGAPLALYDDPDNMFVAGFIGSPRMN 240
Query: 241 FVEARV 246
F+ A V
Sbjct: 241 FLPAVV 246
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 244 bits (617), Expect = 1e-63
Identities = 131/289 (45%), Positives = 194/289 (66%), Gaps = 11/289 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I ++N+ K FG+F AL +INL I+ GE +ALLGPSGSGK++LL +AG+ G IYF
Sbjct: 3 IVIQNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFH 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELR----KAPKDEIDEKVRKVAK 119
+ VT+ R +G VFQ++AL+PHMTV NI++ L ++ + K EI EKVR++
Sbjct: 63 KDKVTQTHAASRQVGFVFQHYALFPHMTVADNISYGLRVKPRKERPSKKEIAEKVRELLA 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ +E + DRYP QLSGGQ+QR+A+ARAL EP+VLLLDEP LDA +R ++R L++L
Sbjct: 123 LVKLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWLRKL 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
E +T+++VTHDQ EAL ++DR+ V+ +GKI QVG+PDEVY +P FV FLGN +
Sbjct: 183 HNEFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQPKSPFVYDFLGN--V 240
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV 288
N RV+ G + + + + + P I + ++ ++ ++ RPH E+
Sbjct: 241 NVFTGRVKQGFVQL-DKHQLKTP----TISKDIHDQEAVVYTRPHHMEI 284
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 243 bits (614), Expect = 2e-63
Identities = 123/232 (53%), Positives = 168/232 (72%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + + K++G+F+ALD+++ + G ALLGPSGSGKSTLL T+AG+ +P +G I +
Sbjct: 5 IVVADATKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITIN 64
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
RDVT +PP+ R IG VFQ++A + H+TV N+AF L++RK PK EI KV + +++ +
Sbjct: 65 GRDVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGL 124
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
RYP QLSGGQ+QR+A+ARAL +PEVLLLDEP LDA +R E+RA L+RL E+
Sbjct: 125 SGFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEV 184
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
+TT+ VTHDQAEAL +ADRIAV+ +G+I QVG+P +VY P FV FLG
Sbjct: 185 HVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLG 236
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 243 bits (614), Expect = 2e-63
Identities = 118/275 (42%), Positives = 185/275 (66%), Gaps = 9/275 (3%)
Query: 14 GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPK 73
G ++ ++ +I++GE + LLGPSGSGK+T+L +AG+ +PT G ++ + VT+LPP+
Sbjct: 14 GGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ 73
Query: 74 DRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQ 133
RN+GLVFQN+AL+ HMTVY N++F L ++ PKDE+D +VR++ + + +E +R+P +
Sbjct: 74 KRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHE 133
Query: 134 LSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHD 193
LSGGQQQRVA+ARAL P+VLL DEP + +D +R E+R ++++ E+G+T+++VTHD
Sbjct: 134 LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHD 193
Query: 194 QAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLI 253
Q EAL +ADR+ V+ EG + Q GTP+EVY KP FV F+G N V++G++ +
Sbjct: 194 QEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGE--SNVWTRAVQNGRIEV 251
Query: 254 SENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV 288
+ +PV + +V + RP D E+
Sbjct: 252 A-GAALPVDPAVSE------GSEVAVVVRPKDVEL 279
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 243 bits (613), Expect = 3e-63
Identities = 136/323 (42%), Positives = 200/323 (61%), Gaps = 21/323 (6%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V I++ + K+FG+F A+ +++L ++ G +ALLGPSGSGKSTLL +AG+ +P SGRI+
Sbjct: 7 VGIQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIF 66
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
RD T +DR IG VFQ++AL+ H+TV KNIAF LELRK K+++ +V ++ +++
Sbjct: 67 LTGRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLELRKHTKEKVRARVEELLELV 126
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
+ L DRYP QLSGGQ+QRVA+ARAL +P+VLLLDEP LDA +R ++R+ L++L
Sbjct: 127 QLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHD 186
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
E+ +TT++VTHDQ EA+ +AD+I V+ GK+ Q+G+P E+Y P FV F+G P+N
Sbjct: 187 EVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDNPATPFVMSFIG--PVNV 244
Query: 242 VEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEV-IKGISEGIVGEV 300
+ + + P P+ + RPHD E+ I I E + +
Sbjct: 245 LP---NSSHIFQAGGLDTPHPEVF---------------LRPHDIEIAIDPIPETVPARI 286
Query: 301 YSFEPLGREQIVTVSVNDSIVKV 323
LG E V + D V V
Sbjct: 287 DRIVHLGWEVQAEVRLEDGQVLV 309
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 242 bits (611), Expect = 5e-63
Identities = 115/232 (49%), Positives = 163/232 (69%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ + + ++FG A+DN++L+I GEF ALLG SGSGK+TLL +AG P G++
Sbjct: 9 VSFQGVTRRFGPVTAVDNVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPNEGQVLMS 68
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
V+++PP R IG+VFQN+AL+PH+T +N+A+PL +R + E +E+V+ ++++
Sbjct: 69 GVSVSDVPPHKRQIGVVFQNYALFPHLTAAENVAYPLRMRGVARHEREERVKAALALVNL 128
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
L YP QLSGGQQQRVA+ARALV P +LL+DEPL LD LR +++ ELKR+Q EL
Sbjct: 129 SDRLGAYPIQLSGGQQQRVALARALVFSPAILLMDEPLGALDRRLRDQMQQELKRIQHEL 188
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
GIT IYVTHDQ+EA+AMADRI ++ G++LQV P+ +Y P FV F+G
Sbjct: 189 GITVIYVTHDQSEAMAMADRIGIMSAGRLLQVADPEAIYAAPSSHFVARFIG 240
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 242 bits (611), Expect = 5e-63
Identities = 129/286 (45%), Positives = 190/286 (66%), Gaps = 10/286 (3%)
Query: 1 MVRIRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
M + L+ +V+ FG+ A+D++++ I DGEF L+GPSG GK+T L +AG P G
Sbjct: 1 MTSVELQGLVRAFGSTTTAVDDVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGE 60
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKD-EIDEKVRKVA 118
I F +R V+ +PP+DR++G+VFQ++AL+PHMTV +N+A+ L R+ P +E+V ++
Sbjct: 61 IVFGDRSVSGVPPEDRDVGIVFQSYALFPHMTVRENVAYGLRFREPPGGASTEERVSELL 120
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++ + DR P LSGGQQQRVA+ARAL P VLLLDEP+S LDA LR +R +K
Sbjct: 121 SLVDLAGTGDREPAALSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRLRGTIKE 180
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG-NP 237
+Q+EL ITT+YVTHDQAEAL+++DR+AV+R+G ++QVGTP+ VY +P +FV F+G N
Sbjct: 181 IQRELDITTVYVTHDQAEALSISDRVAVMRDGAVVQVGTPEAVYREPSSRFVAEFVGENN 240
Query: 238 PMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRP 283
++ +E G +S N V + + + DV +G RP
Sbjct: 241 VVSGTAVPLETGGSSVSVNG---VTFEVSECV----TGDVAVGLRP 279
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 242 bits (610), Expect = 7e-63
Identities = 119/217 (54%), Positives = 159/217 (72%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNIG 78
LDNINL+IK EF+ LLGPSG GK+TL+ + G +G IYF +++++ P R I
Sbjct: 23 LDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFSKEISKTSPNKREIN 82
Query: 79 LVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQ 138
VFQN+AL+PHM V+ NI+F L ++K PKD I EKV+ ++ + K R +LSGGQ
Sbjct: 83 TVFQNYALFPHMNVFDNISFGLRMKKTPKDIIKEKVKTSLSLIGMPKYAYRNINELSGGQ 142
Query: 139 QQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEAL 198
+QRVAIARA+V EP++LLLDEPLS LD +R E++ ELK++Q++LGIT IYVTHDQ EAL
Sbjct: 143 KQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKELKKIQRQLGITFIYVTHDQEEAL 202
Query: 199 AMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
M+DRI V+ EG ILQ+GTP+E+Y +P KFV F+G
Sbjct: 203 TMSDRIVVMNEGIILQIGTPEEIYNEPKTKFVADFIG 239
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 241 bits (609), Expect = 9e-63
Identities = 113/236 (47%), Positives = 174/236 (72%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++++N K +G+ I ++IN K GEF+ LLGPSG GKSTLL +AG+ + G+I
Sbjct: 1 MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKI 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+++D+T+L P+ RNIG+VFQN+AL+P++ V++N+AF L+++K K +I+++V+K+ K+
Sbjct: 61 SLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKKMDKKDIEKRVKKMLKL 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ +E+ YP +LSGGQ QRVA+AR+LV +P++LLLDEPLS LDA +R +R ++K +Q
Sbjct: 121 VELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQIKEIQ 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
KEL +TTI+VTHDQ EAL ++D I ++ EGKI+Q + +Y P FV F+GN
Sbjct: 181 KELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNLYLLPESHFVASFIGN 236
>sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROTEIN AGLK
>gi|4210903|gb|AAD12046.1| (AF045609) AglK
[Sinorhizobium meliloti]
Length = 363
Score = 240 bits (607), Expect = 1e-62
Identities = 143/364 (39%), Positives = 201/364 (54%), Gaps = 15/364 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + L++I K +G + I+L+IK+GEF+ +GPSG GKSTLL +AG+ + T G +
Sbjct: 1 MTGLLLKDIRKSYGAVDVIHGIDLDIKEGEFVVFVGPSGCGKSTLLRMIAGLEEITGGDM 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ D V ++PP R I +VFQ++ALYPHMTVY N+AF + + + K+EID +VR A M
Sbjct: 61 FIDGERVNDVPPSKRGIAMVFQSYALYPHMTVYDNMAFGMRIARESKEEIDRRVRGAADM 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LDR P LSGGQ+QRVAI RA+ + P+V L DEPLSNLDA LR+ E ++ Q
Sbjct: 121 LQLTPYLDRLPKALSGGQRQRVAIGRAICRNPKVFLFDEPLSNLDAALRVATAIENRQAQ 180
Query: 181 KELGITT-IYVTHDQAEALAMADRIAVI-REGKILQVGTPDEVYYKPMYKFVGGFLGNPP 238
+ + TT IYVTHDQ EA+ +ADRI V R Q G P E+Y +P FV F+G+PP
Sbjct: 181 RAMSNTTMIYVTHDQVEAMTLADRIVVFSRRSTFEQFGAPFELYERPANFFVARFIGSPP 240
Query: 239 MNFVEARVEDG------KLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGI 292
MN + A + L ++ + VP + N K G RP D V +
Sbjct: 241 MNVIPATITATGQQTAVSLAGGKSVTLDVPTNASE-----NGKTASFGVRPEDLRVTEAD 295
Query: 293 SEGIVGEVYSFEPLGREQIVTVS--VNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
G V E LG ++ + V + + P G+KV + + LFD
Sbjct: 296 DFLFEGTVSIVEALGEVTLLYIEGLVENEPIIAKMPGIARVGRGDKVRFTADKAKLHLFD 355
Query: 351 KKSE 354
+
Sbjct: 356 TNGQ 359
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 240 bits (605), Expect = 3e-62
Identities = 126/294 (42%), Positives = 189/294 (63%), Gaps = 14/294 (4%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
++++ +VKKFG+ A+DNI+L+I E ALLG SGSGKSTLL +AG+ P G+I D
Sbjct: 58 LKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMESPNQGKIILD 117
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+D+T+L P DR I ++FQ++AL+PHMTV +NIAF L+ K PK EI +V ++ +++ +
Sbjct: 118 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 177
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
K R P QLSGGQQQR+A+AR+L K P++LLLDEPL LD LR + + EL +++
Sbjct: 178 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 237
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G+T I VTHDQ EA+ MA RIA++ +G++ QVGTP +VY P +F F+G E
Sbjct: 238 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIG-------E 290
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERL-------NVKDVIIGFRPHDAEVIK 290
+ DG ++ +Y + + + R+ + +D+ + RP D ++ K
Sbjct: 291 TNIFDGVVIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYK 344
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 239 bits (604), Expect = 3e-62
Identities = 126/294 (42%), Positives = 189/294 (63%), Gaps = 14/294 (4%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
++++ +VKKFG+ A+DNI+L+I E ALLG SGSGKSTLL +AG+ P G+I D
Sbjct: 13 LQIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMENPNQGKIILD 72
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+D+T+L P DR I ++FQ++AL+PHMTV +NIAF L+ K PK EI +V ++ +++ +
Sbjct: 73 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 132
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
K R P QLSGGQQQR+A+AR+L K P++LLLDEPL LD LR + + EL +++
Sbjct: 133 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 192
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G+T I VTHDQ EA+ MA RIA++ +G++ QVGTP +VY P +F F+G E
Sbjct: 193 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIG-------E 245
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERL-------NVKDVIIGFRPHDAEVIK 290
+ DG ++ +Y + + + R+ + +D+ + RP D ++ K
Sbjct: 246 TNIFDGVVIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYK 299
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 239 bits (603), Expect = 4e-62
Identities = 135/321 (42%), Positives = 193/321 (60%), Gaps = 40/321 (12%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + N+ K F F ALD+INL+I+ GE +ALLGPSG GK+TLL +AG+ P +G I F
Sbjct: 3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFH 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDE------IDEKVRKV 117
DV++ +DRN+G VFQ++AL+ HMTV+ N+AF L ++ PK E I KV ++
Sbjct: 63 GEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMK--PKGERPGESAIKAKVHEL 120
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
M+ ++ L DRYP QLSGGQ+QR+A+ARAL EP++LLLDEP LDA +R E+R L
Sbjct: 121 LNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLA 180
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNP 237
RL +E+ +T+++VTHDQ EA+ +ADRI V+ +G I Q+G+P EVY P FV FLG
Sbjct: 181 RLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLG-- 238
Query: 238 PMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK-GISEGI 296
+ +L + + ++ FRPH+ + + ++E
Sbjct: 239 ---------DSNRLQLGNDQHLL--------------------FRPHEVSLSRSAVAEHR 269
Query: 297 VGEVYSFEPLGREQIVTVSVN 317
EV PLG VT+ V+
Sbjct: 270 AAEVRDIRPLGAITRVTLKVD 290
>gi|11466425 probable transport protein [Mesostigma viride]
>gi|7259568|gb|AAF43869.1|AF166114_81 (AF166114)
probable transport protein [Mesostigma viride]
Length = 348
Score = 239 bits (603), Expect = 4e-62
Identities = 123/232 (53%), Positives = 162/232 (69%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I ++NI KKFGNF AL++INLEIK G +ALLGPSGSGKSTLL +AG+ P G I+
Sbjct: 3 ILIDNISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWIS 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
++ + + RNIG VFQN+AL+ +MTVY NIAF LELR+ ++I KV K+ +++ +
Sbjct: 63 GKNASGYSIQSRNIGFVFQNYALFKNMTVYDNIAFGLELRRISFNDISRKVNKLLELVQL 122
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ L RYP QLSGGQ+QR+A+ARAL EP+VLLLDEP LDA +R +RA L+ L +
Sbjct: 123 QNLGHRYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNLRAWLRDLHNKF 182
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
ITTI VTHDQ EA+ +AD I V G+I Q+G P ++Y +P FV LG
Sbjct: 183 SITTIIVTHDQQEAMEIADEIVVFNSGRIEQIGKPQDIYDQPATPFVFSLLG 234
>pir||B83571 probable ATP-binding component of ABC transporter PA0603 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946476|gb|AAG03992.1|AE004496_8 (AE004496) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 239 bits (603), Expect = 4e-62
Identities = 135/326 (41%), Positives = 192/326 (58%), Gaps = 19/326 (5%)
Query: 2 VRIRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
V + + K + G + + ++NL+I+ GEF+ LLGPSGSGK+T L +AG PT+G I
Sbjct: 9 VLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEI 68
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
R + +PP R+IG+VFQN+AL+PHMTV +N+AFPL +R K ++ E+V++ M
Sbjct: 69 LLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSM 128
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ ++ RYP QLSGGQQQRVA+ARALV EP+++L+DEPL LD LR ++ E+K L
Sbjct: 129 VQLDAFAGRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLH 188
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ LG+T +YVTHDQ EAL M+DR+AV +G+I Q+ P +Y +P FV F+G
Sbjct: 189 QRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIG----- 243
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNV------KDVIIGFRPHDAEVIKGISE 294
E G+LL + V + +E L V + V + RP + G SE
Sbjct: 244 --ENNRLSGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVR-LNGASE 300
Query: 295 GIV----GEVYSFEPLGREQIVTVSV 316
V G V F LG V + V
Sbjct: 301 SCVNRFSGRVAEFVYLGDHVRVRLEV 326
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 239 bits (603), Expect = 4e-62
Identities = 121/244 (49%), Positives = 170/244 (69%), Gaps = 2/244 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ + N+ ++FG+F A+DN++L I GEF LLGPSG GK+TLL +AG +P SG I +
Sbjct: 6 LEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLN 65
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+D+ + P+ R + VFQ++AL+PHM+V +NIAFPL++ K EID +V + K + +
Sbjct: 66 GQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVEQALKDVRL 125
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
R P QLSGGQ+QRVAIARALV P +LLLDEPLS LDA LR E++ EL LQK++
Sbjct: 126 ADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKDV 185
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT +YVTHDQ EALA++ RIAV+ +G++ Q+ P+ +Y P +FV F+G N ++
Sbjct: 186 GITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIGQ--CNLLD 243
Query: 244 ARVE 247
A VE
Sbjct: 244 ATVE 247
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 237 bits (599), Expect = 1e-61
Identities = 118/232 (50%), Positives = 164/232 (69%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
++L I K F + ++L I +GEF+ LLGPSG GK+T+L +AG+ SGRI D
Sbjct: 18 VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLD 77
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D+T +P ++R + VFQ++AL+PHMTV++N+AF L ++K P EI +V + +M+ +
Sbjct: 78 NEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQL 137
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E R P QLSGGQQQRVAIARA+V +P +LLLDE LS LD LR +++ ELK LQ++L
Sbjct: 138 ETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKL 197
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
GIT ++VTHDQ EAL M+DRI V+R+G+I Q GTP E+Y +P FV GF+G
Sbjct: 198 GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIG 249
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 236 bits (597), Expect = 2e-61
Identities = 112/246 (45%), Positives = 174/246 (70%), Gaps = 2/246 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ L N+ K+FG+ +DNINL I G+ + LLGPSG GK+T+L VAG+ KP+ G+I+ D
Sbjct: 11 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 70
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
DVT + R+I +VFQ++AL+PHM++ +N+ + L++ P+ E+ +V++ M+ +
Sbjct: 71 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 130
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E DR+ Q+SGGQQQRVA+ARAL+ +P+VLL DEPLSNLDA LR +R +++ LQK+
Sbjct: 131 EGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 190
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
IT++YVTHDQ+EA A++D + V+ +G I+Q+G+P ++Y +P +F+ F+G+ N
Sbjct: 191 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD--ANLFP 248
Query: 244 ARVEDG 249
A DG
Sbjct: 249 ATFSDG 254
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 236 bits (597), Expect = 2e-61
Identities = 112/246 (45%), Positives = 174/246 (70%), Gaps = 2/246 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ L N+ K+FG+ +DNINL I G+ + LLGPSG GK+T+L VAG+ KP+ G+I+ D
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
DVT + R+I +VFQ++AL+PHM++ +N+ + L++ P+ E+ +V++ M+ +
Sbjct: 67 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 126
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E DR+ Q+SGGQQQRVA+ARAL+ +P+VLL DEPLSNLDA LR +R +++ LQK+
Sbjct: 127 EGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 186
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
IT++YVTHDQ+EA A++D + V+ +G I+Q+G+P ++Y +P +F+ F+G+ N
Sbjct: 187 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD--ANLFP 244
Query: 244 ARVEDG 249
A DG
Sbjct: 245 ATFSDG 250
>gb|AAB59057.1| (J01648) malK [Escherichia coli]
Length = 370
Score = 235 bits (594), Expect = 5e-61
Identities = 131/323 (40%), Positives = 199/323 (61%), Gaps = 11/323 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L+N+ K +G + +INL+I +GEF+ +GPSG GKSTLL +AG+ TSG +
Sbjct: 1 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 60
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ E+ + + PP +R +G+VFQ++ALYPH++V +N++F L+ A K+ I+++V +VA++
Sbjct: 61 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEV 120
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + LLDR P LSGGQ+QRVAI R LV EP V LLDEPLSNLDA LR+++R E+ RL
Sbjct: 121 LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 180
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV------YYKPMYKFVGGFL 234
K LG T IYVTHDQ EA+ +AD+I V+ G++ QVG P V + + +Y+F L
Sbjct: 181 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLAVPLSGRPFCRRIYRFAKDEL 240
Query: 235 GNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE 294
+ +L + + +P + R + N+ +G RP + I++
Sbjct: 241 LPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMS---LGIRPEHL-LPSDIAD 296
Query: 295 GIV-GEVYSFEPLGREQIVTVSV 316
I+ GEV E LG E + + +
Sbjct: 297 VILEGEVQVVEQLGNETQIHIQI 319
>pir||T36808 probable sugar transport system ATP-binding chain - Streptomyces
coelicolor >gi|5441781|emb|CAB46805.1| (AL096811)
putative ABC sugar transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 445
Score = 235 bits (593), Expect = 7e-61
Identities = 129/295 (43%), Positives = 185/295 (61%), Gaps = 9/295 (3%)
Query: 4 IRLENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
I L ++ K + + +D ++L+I GEF+ LLGPSG GKST+L +AG+ + T G +
Sbjct: 5 ISLHDVSKTYARGVRVVDRLSLDIAPGEFLVLLGPSGCGKSTVLRMIAGLEEITEGELTL 64
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
D +L P +R + +VFQN+ALYP+MT NI FPL + P+ + +V A+ML
Sbjct: 65 DGAYANDLLPAERRMAMVFQNFALYPNMTTRGNIGFPLRVED-PQTDHTPRVDATARMLG 123
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
IE LLDR P QLSGG++QRVA+ RA+ + P L+DEPLSNLDA LR +RAE+ RL +E
Sbjct: 124 IEDLLDRLPAQLSGGERQRVAMGRAISRHPTAFLMDEPLSNLDAKLRNHLRAEITRLTRE 183
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
LG+TTIYVTHDQ+EA+++ DR+AV+R G + QV TP VY P FV F+G P +N +
Sbjct: 184 LGVTTIYVTHDQSEAMSLGDRVAVLRGGVLQQVDTPRAVYALPRNVFVAAFIGTPRINLL 243
Query: 243 EARVE---DGKLLIS-ENNYIPVPKQY---RQIIERLNVKDVIIGFRPHDAEVIK 290
V DG + IS ++ +P+ Q++ ++VI+G R + K
Sbjct: 244 RGLVRAPLDGAMTISLGKQFLRLPEPLSLDHQLLRVQQGREVIVGLRSEAVRIAK 298
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 235 bits (592), Expect = 9e-61
Identities = 132/313 (42%), Positives = 198/313 (63%), Gaps = 22/313 (7%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
L+NI K FG + +DN++L IK G + LLGPSG GK+T+L VAG+ PTSG+I+ D
Sbjct: 9 LKNITKAFGKAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGE 68
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
DVT+ ++R+I +VFQ++AL+PHM++ N+ + L+++ K+E ++V++ +++ +
Sbjct: 69 DVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALELVDLAG 128
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
DR+ Q+SGGQQQRVA+ARALV +P+VLL DEPLSNLDA LR +R +++ LQ+ LGI
Sbjct: 129 FEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQRLGI 188
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
T++YVTHDQ EA A++D + V+ +GKI+Q E+Y +P F+ F+G E+
Sbjct: 189 TSLYVTHDQTEAFAVSDEVIVMNKGKIMQKAPAKELYLRPNSLFLANFMG-------ESS 241
Query: 246 VEDGKL---LISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG------- 295
+ DGKL + N Y K Q L + ++G RP E I +EG
Sbjct: 242 IFDGKLENGVADINGYSVPLKDAAQF--NLPDGECLVGIRP---EAIYLAAEGSDAQRCE 296
Query: 296 IVGEVYSFEPLGR 308
I VY +PLG+
Sbjct: 297 IKSAVYMGQPLGK 309
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 235 bits (592), Expect = 9e-61
Identities = 113/235 (48%), Positives = 168/235 (71%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V ++++ + K+F +A+D ++L I GE ALLG SGSGKSTLL +AG +PT GRI+
Sbjct: 21 VLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIF 80
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
D +D+T+LPP +R I ++FQ++AL+PHM+V +NIAF L+ PK EIDE+V ++ K++
Sbjct: 81 LDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLV 140
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
H+ + R P QLSGGQ+QRVA+AR+L K P++LLLDEP+ LD LR +++ EL + +
Sbjct: 141 HMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIE 200
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
+G+T + VTHDQ EA+ MA RIA++ G I Q+G+P ++Y P + V F+GN
Sbjct: 201 RVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGN 255
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 234 bits (590), Expect = 1e-60
Identities = 140/354 (39%), Positives = 212/354 (59%), Gaps = 19/354 (5%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+++E+I K + F L I+ ++++GE +LGPSGSGK+ LL +AGI P GRI
Sbjct: 2 LKVESISKDYREF-KLREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILLR 60
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D+T LPP+ RN + QN+AL+PHMTV+ NIAF L+LRK P+ E+ KVR+VA+ L I
Sbjct: 61 GEDITGLPPEKRNFSYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREVAESLGI 120
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ LL R P LSGG+QQRVAIARALV +PE+LL+DEP +NLD + ++ E+KR +KE
Sbjct: 121 DHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMKRWRKEF 180
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G T I+VTH EAL++ DR+ ++ G+++QVG +V+ KP + V FLG N +E
Sbjct: 181 GFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEVARFLGFE--NIIE 238
Query: 244 ARVEDGKLLISENNYIPVPKQ-YRQIIERLNVKDVII---GFRPHDAEVIKGISEGIVGE 299
V +G++L + I +P++ + ++ + +D+ I G + V K EGI
Sbjct: 239 G-VANGRILKVGDLRIELPREVWGKVRVGIRPEDITIFMEGVKTSARNVFKARVEGI--- 294
Query: 300 VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNF----GEKVTIKLKEGSVVLF 349
E LG +T+++ I++ F GE+V K ++ +F
Sbjct: 295 ----EDLGALVKLTLNLGGIILRAFITRSSLIELGIREGEEVYASFKASAIHVF 344
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 233 bits (589), Expect = 2e-60
Identities = 123/243 (50%), Positives = 166/243 (67%), Gaps = 8/243 (3%)
Query: 17 IALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRN 76
+AL ++L+I+D EF LLGPSG GK+TLL +AG PT G I ++ PP +R
Sbjct: 29 VALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERP 88
Query: 77 IGLVFQNWALYPHMTVYKNIAFPLELR----KAPKDEIDEKVRKVAKMLHIEKLLDRYPW 132
+ VFQ++AL+PHM++ +N+AF LE R K EI E+VR++ ++ +E+ DR P
Sbjct: 89 VNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPG 148
Query: 133 QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTH 192
QLSGGQQQRVA+ARAL +P VLLLDEPLS LD LR +R ELK +Q + GIT I+VTH
Sbjct: 149 QLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIFVTH 208
Query: 193 DQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARV--EDGK 250
DQ EAL M+DRIAV+ EG++ QVG P+E+Y +P +FV F+G NF+EA + DG
Sbjct: 209 DQEEALTMSDRIAVLSEGQVQQVGPPEEIYERPGNRFVADFIGE--TNFIEAELLQRDGP 266
Query: 251 LLI 253
L +
Sbjct: 267 LAL 269
>pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654969|gb|AAF93709.1| (AE004140) sulfate ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 376
Score = 233 bits (588), Expect = 3e-60
Identities = 119/237 (50%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
IRL+NI K FG F AL ++L+I+DGE + LLGPSGSGK+TLL +AG+ SG I+F
Sbjct: 3 IRLDNISKHFGQFQALAPLSLKIEDGEMIGLLGPSGSGKTTLLRIIAGLEGADSGTIHFR 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKD----EIDEKVRKVAK 119
RDVT + +DR +G VFQN+AL+ HMTV N+AF L++ + + EI ++V+++ +
Sbjct: 63 NRDVTNVHVRDRRVGFVFQNYALFRHMTVADNVAFGLQVMERAQRPNPAEIQKRVKQLLE 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + L RYP QLSGGQ+QR+A+ARAL +PEVLLLDEP LDA +R E+R L+ L
Sbjct: 123 IVQLGHLAHRYPEQLSGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWLRSL 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
ELG T+++VTHDQ EAL ++DR+ V+ G+I Q+ +P E+Y +P +FV F GN
Sbjct: 183 HDELGFTSVFVTHDQDEALELSDRVVVMSNGRIEQIDSPVELYAQPNSRFVFDFFGN 239
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 233 bits (587), Expect = 3e-60
Identities = 111/246 (45%), Positives = 172/246 (69%), Gaps = 2/246 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ L N+ K+FG+ +DNINL I G+ + LLGPSG GK+T+L VAG+ KP+ G+I+ D
Sbjct: 7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFID 66
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
DVT + R+I +VFQ++AL+PHM++ +N+ + L++ P+ E+ +V++ M+ +
Sbjct: 67 GEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDL 126
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E DR+ Q+SGGQQQRVA RAL+ +P+VLL DEPLSNLDA LR +R +++ LQK+
Sbjct: 127 EGFEDRFVDQISGGQQQRVAWPRALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQF 186
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
IT++YVTHDQ+EA A++D + V+ +G I+Q+G+P ++Y +P +F+ F+G+ N
Sbjct: 187 DITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD--ANLFP 244
Query: 244 ARVEDG 249
A DG
Sbjct: 245 ATFSDG 250
>pir||E71296 probable spermidine/putrescine ABC transporter, ATP-binding protein
(potA) - syphilis spirochete >gi|3322953|gb|AAC65627.1|
(AE001240) spermidine/putrescine ABC transporter,
ATP-binding protein (potA) [Treponema pallidum]
Length = 379
Score = 232 bits (586), Expect = 4e-60
Identities = 115/232 (49%), Positives = 164/232 (70%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ ++ + K +G+ +A+D + I+ GEF ++LGPSG GK+TLL +AG +P SG + FD
Sbjct: 10 VTIDQVSKAYGHCLAVDRATVHIRQGEFFSILGPSGCGKTTLLRIIAGFEQPDSGDLTFD 69
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
V + R VFQ++AL+PH++VY+NIAFPL L++ K+ I E+V + ++ +
Sbjct: 70 HVSVLGVGANKRRSNTVFQSYALFPHLSVYENIAFPLRLKRLSKNLIRERVHEYLHLVQL 129
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
++ L + P QLSGGQQQRVAIARALV EP VLLLDEPLS LDA LR + EL L +
Sbjct: 130 DEHLHKKPHQLSGGQQQRVAIARALVCEPGVLLLDEPLSALDAKLRSNLLIELDTLHDQT 189
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
GIT +++THDQ+EAL+++DRIAV+ +GKILQ+GTP E+Y +P FV F+G
Sbjct: 190 GITFVFITHDQSEALSVSDRIAVMNKGKILQIGTPYEIYEQPATDFVAKFIG 241
>pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106344|gb|AAF84156.1|AE003966_17 (AE003966) sulfate
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 348
Score = 230 bits (580), Expect = 2e-59
Identities = 112/236 (47%), Positives = 166/236 (69%), Gaps = 4/236 (1%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
IR++ + K+F +F AL I+L+I+ GE +ALLGPSGSGK+TLL +AG+ +GR+ F
Sbjct: 3 IRIQELCKQFEDFTALAGIDLDIRQGELLALLGPSGSGKTTLLRIIAGLEHADAGRVLFG 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKA----PKDEIDEKVRKVAK 119
+ D T + + R +G VFQ++AL+ HM+VY+N+AF L +R+ P+ +I +V ++
Sbjct: 63 DEDATMMSVQARRVGFVFQHYALFKHMSVYENVAFGLRVRRGKARWPESQISARVFELLS 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ ++ L RYP QLSGGQ+QRVA+ARAL EP VLLLDEP LDA +R ++R L+ +
Sbjct: 123 LVQLDGLEQRYPMQLSGGQRQRVALARALAIEPRVLLLDEPFGALDAQVRRDLRRWLREI 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
G+TT++VTHDQ EAL +ADR+A++ +G+I QV +P EVY +P FV F+G
Sbjct: 183 HDRTGLTTVFVTHDQEEALELADRVAILNQGRIEQVASPAEVYNRPSSPFVYSFVG 238
>gb|AAB67294.1| (U59485) AttA1 [Agrobacterium tumefaciens]
Length = 337
Score = 229 bits (577), Expect = 5e-59
Identities = 133/338 (39%), Positives = 200/338 (58%), Gaps = 15/338 (4%)
Query: 32 MALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMT 91
M++LGPSGSGK+++L +AG +PT+GRI +RDVT+L P RNIG+VFQ +AL+PH+T
Sbjct: 1 MSVLGPSGSGKTSVLTMIAGFERPTAGRIVIGDRDVTDLAPNKRNIGMVFQKYALFPHLT 60
Query: 92 VYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKE 151
V +NIAFPL+LR + ++ + ++H+ DR+P +LSGGQQQRVA+ARAL E
Sbjct: 61 VRQNIAFPLKLRSRWRSGWRQRADDMLDLVHLAGFADRFPSELSGGQQQRVAVARALAFE 120
Query: 152 PEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGK 211
P V+L+DEPL LD LR ++ E+KR+Q+++G T +YVTHDQ EAL M+DR+A+++ G
Sbjct: 121 PPVMLMDEPLGALDKKLREAMQFEIKRIQRQVGATVLYVTHDQEEALTMSDRVAIMQGGN 180
Query: 212 ILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARV----EDGKLLISENNYIPVPKQYRQ 267
I+Q+G P +Y+ P +FV F+G M+FV + +DG L+ ++
Sbjct: 181 IVQIGAPSSLYHAPATRFVADFVGK--MSFVGGEIVSFEDDGMLVRLADDVFVRTASVDA 238
Query: 268 IIERLNVKD-VIIGFRPHDAEVIKGISEG---IVGEVYSFEPLGREQIVTVSVN---DSI 320
L + D VI+ RP + K G I ++ S +G V ++ +
Sbjct: 239 ARAALRLGDEVILAMRPERIALKKRGPRGFGAIPAQIESLAFVGSFHAYMVRLDLPGSPL 298
Query: 321 VKVFAPEGEHFNF--GEKVTIKLKEGSVVLFDKKSEKA 356
V+V G NF G+ V + +V F K+ A
Sbjct: 299 VEVQVVTGSEVNFRAGDTVDLVPDPQAVSFFSKEETSA 336
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 227 bits (573), Expect = 1e-58
Identities = 140/356 (39%), Positives = 207/356 (57%), Gaps = 23/356 (6%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+R+E++ K + F L +I+ ++K E +LGPSG+GK+ LL +AGI +P GRI +
Sbjct: 2 LRVESVSKDYKEF-KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
DVT PP+ RN+ + Q++AL+PHMTVY NIAF L+LR+ + EID KV++++K+L I
Sbjct: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E LL R P LSGG++QRVAIARALV EPE+LLLDEP +NLD + E+K +KEL
Sbjct: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G T+++VTH EA+++ DR+ V+ G+++QVG EV+ P+ + V FLG N +E
Sbjct: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVK-DVIIGFRPHD----AEVIKGISEG-IV 297
V G +L + I +P ++V+ V IG RP D E +K +
Sbjct: 239 G-VAKGNILEANGVKITLP---------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFR 288
Query: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNF----GEKVTIKLKEGSVVLF 349
EV E LG V + + +K F G +V + K ++ +F
Sbjct: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
>emb|CAC02745.1| (AL390114) probable sulfate transport ATP-binding protein cysa
[Leishmania major]
Length = 263
Score = 227 bits (573), Expect = 1e-58
Identities = 115/244 (47%), Positives = 169/244 (69%), Gaps = 10/244 (4%)
Query: 12 KFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELP 71
+FG+F+ALD++ L+ +GE ALLGPSG GK+TLL +AG+ + G++ + +D T P
Sbjct: 1 QFGDFVALDDVTLDFAEGELTALLGPSGCGKTTLLRVIAGLERADRGQVLLEGQDATGQP 60
Query: 72 PKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDE------IDEKVRKVAKMLHIEK 125
+ R +G VFQ++AL+ HMTV++N+AF L ++ P+ E I E+VR + +++ +
Sbjct: 61 VRQRQVGFVFQHYALFRHMTVFENVAFGLRVK--PRGERPGXAXIRERVRALLELVQXDW 118
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
L DRYP QLSGGQ+QR+A+ RAL EP VLLLDEP LDA +R E+R L+RL EL +
Sbjct: 119 LADRYPPQLSGGQRQRIALXRALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHV 178
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
T+++VTHDQ EAL +ADR+ +++ G++ QVG+P VY P FV GFLG+ +N + R
Sbjct: 179 TSVFVTHDQEEALEVADRVVLMQRGRVEQVGSPQAVYEHPATPFVFGFLGH--VNRIHGR 236
Query: 246 VEDG 249
+E G
Sbjct: 237 LERG 240
>pir||G83605 probable ATP-binding component of ABC transporter PA0326 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946173|gb|AAG03715.1|AE004470_9 (AE004470) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 349
Score = 227 bits (572), Expect = 2e-58
Identities = 122/248 (49%), Positives = 166/248 (66%), Gaps = 6/248 (2%)
Query: 4 IRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
I +E I +FG ALD+++L+I EF LLGPSG GK+TLL +AG +P+SG
Sbjct: 5 IAIERICMEFGTPGQGLKALDDVSLDIHANEFFTLLGPSGCGKTTLLRLIAGFEQPSSGS 64
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
I + LPP R + VFQ++AL+PHM+V NI F LE++ P+ EID V ++
Sbjct: 65 IRLYGEHMEGLPPFRRPVNTVFQSYALFPHMSVADNIGFGLEMQGRPRSEIDATVSRMLD 124
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + ++ R QLSGGQQQR+A+ARAL P+VLLLDE LS LD LR E++ ELKRL
Sbjct: 125 LVKLPEVGKRRADQLSGGQQQRIALARALASRPKVLLLDESLSALDLKLRKEMQIELKRL 184
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
Q E GIT I+VTHDQ EAL M+DRIAV+ +GK+LQVGTP ++Y P+ + V F+G
Sbjct: 185 QHETGITFIFVTHDQEEALTMSDRIAVMSKGKVLQVGTPSDIYEAPLNRAVADFIGE--T 242
Query: 240 NFVEARVE 247
NF+E + +
Sbjct: 243 NFLEGQAD 250
>sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7428825|pir||QRECSA
sulfate transport ATP-binding protein cysA - Escherichia
coli >gi|1788761|gb|AAC75475.1| (AE000329) ATP-binding
component of sulfate permease A protein; chromate
resistance [Escherichia coli K12]
>gi|1799841|dbj|BAA16296.1| (D90871) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
>gi|1799851|dbj|BAA16305.1| (D90872) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
Length = 365
Score = 224 bits (565), Expect = 1e-57
Identities = 120/259 (46%), Positives = 172/259 (66%), Gaps = 6/259 (2%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + NI K FG L++I+L+I G+ +ALLGPSGSGK+TLL +AG+ TSG I F
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLEL---RKAPKDE-IDEKVRKVAK 119
DV+ L +DR +G VFQ++AL+ HMTV+ NIAF L + R+ P I KV K+ +
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLE 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
M+ + L DRYP QLSGGQ+QRVA+ARAL EP++LLLDEP LDA +R E+R L++L
Sbjct: 123 MVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQL 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+EL T+++VTHDQ EA +ADR+ V+ +G I Q PD+V+ +P +FV F+G +
Sbjct: 183 HEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGE--V 240
Query: 240 NFVEARVEDGKLLISENNY 258
N ++ + G+ + + +
Sbjct: 241 NRLQGTIRGGQFHVGAHRW 259
>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
(AF242881) motB [Agrobacterium tumefaciens]
Length = 394
Score = 224 bits (564), Expect = 2e-57
Identities = 113/240 (47%), Positives = 163/240 (67%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + + K +G L +INL I+ GEFM LLGPSGSGK+TLL T+AG +P G + F
Sbjct: 44 ISIAGVTKSYGPVKVLSDINLHIRSGEFMTLLGPSGSGKTTLLMTLAGFIRPDFGSLKFG 103
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
E +V P R +G++FQN+AL+PHM+V NIA+PL++R ++ I +VR V + + +
Sbjct: 104 EEEVILRAPHLRGVGMMFQNYALFPHMSVEANIAYPLKIRGEDRETIKARVRDVLETVQL 163
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
R +LSGGQ+QR+A+ARA+V +P++LL+DEPLS LD LR ++ EL+ + ++L
Sbjct: 164 GGYGSRRISELSGGQRQRIALARAIVFKPKILLMDEPLSALDKNLRELMQLELRTMHEQL 223
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G+TT+ VTHDQ EAL M+DRIAV+R GKI Q+ T + +Y +P +FV F+G VE
Sbjct: 224 GMTTVLVTHDQREALTMSDRIAVLRNGKIAQIDTSETLYSEPNSEFVAAFMGESSFLTVE 283
>pir||T35802 probable polyamine ABC-transporter ATP-binding protein -
Streptomyces coelicolor >gi|3413309|emb|CAA20221.1|
(AL031225) putative polyamine ABC-transporter
ATP-binding p rotein [Streptomyces coelicolor A3(2)]
Length = 397
Score = 223 bits (563), Expect = 2e-57
Identities = 119/300 (39%), Positives = 186/300 (61%), Gaps = 9/300 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+RL I K +G+F A+ ++L + G F ALLG SG GK+T L +AG+ +P+ G ++
Sbjct: 19 VRLAGISKTYGSFTAVHPLDLTVPQGSFFALLGASGCGKTTTLRMIAGLEEPSGGTVHLG 78
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
++DVT LPP R + VFQ++AL+PH+ +Y+N+AF L R+ + ++V ++ ++ +
Sbjct: 79 DQDVTALPPYKRPVNTVFQSYALFPHLDIYENVAFGL--RRRGIKSVKKQVGEMLDLVQL 136
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ + P QLSGGQQQRVA+ARAL+ P+VLLLDEPL LD LR +++ ELKR+Q E+
Sbjct: 137 GEQARKKPHQLSGGQQQRVAVARALINHPKVLLLDEPLGALDLKLRRQMQLELKRIQTEV 196
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT ++VTHDQ EA+ MAD++AV+ G++ Q+G P ++Y P FV FLG N +E
Sbjct: 197 GITFVHVTHDQEEAMTMADQVAVMNAGRVEQLGAPADLYENPRTTFVANFLGT--SNLIE 254
Query: 244 ARVE----DGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGE 299
A V+ D ++ + + + +P + K V++G RP + G + E
Sbjct: 255 AEVDTRSGDDVVVKAAGDKLVLPGARCSAPAKTGGK-VLVGVRPEKISLTHADDAGSIPE 313
>gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas putida]
Length = 282
Score = 223 bits (563), Expect = 2e-57
Identities = 110/233 (47%), Positives = 169/233 (72%), Gaps = 2/233 (0%)
Query: 3 RIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
++++ NI K+FG F AL++++L+I GE + LLGPSG GK+TLL +AG+ + G +Y
Sbjct: 9 QMKVRNIHKRFGAFTALNDVSLDIAAGELVCLLGPSGCGKTTLLRCIAGLERQDRGTLYI 68
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
ERD++ELPP+ R+ G++FQ++AL+P++TV NIA+ L + +++ ++V ++ +++
Sbjct: 69 GERDISELPPQARDYGILFQSYALFPNLTVEANIAYGLT--GSGREQARQRVTEMLELVG 126
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
+ +YP QLSGGQQQRVA+ARAL P +LLLDEP+S LDA +R + EL++LQ++
Sbjct: 127 LAGSEKKYPGQLSGGQQQRVALARALAPSPSLLLLDEPMSALDARVREHLCTELRQLQRQ 186
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
LGITT+ VTH+Q EA+ MADRIAV+ G++ Q TP E+Y +P FV F+G
Sbjct: 187 LGITTLMVTHNQDEAMLMADRIAVMNNGQVEQYATPQEIYDQPATPFVAEFVG 239
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 221 bits (558), Expect = 8e-57
Identities = 116/250 (46%), Positives = 163/250 (64%), Gaps = 6/250 (2%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I ++N+ K FGNF AL NINL + G+ ++LLGPSG GK+TLL +AG+ G+I FD
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGKILFD 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLEL----RKAPKDEIDEKVRKVAK 119
+DVT ++R +G VFQ++AL+ HM V+ N+AF L + + K +I KV ++ K
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQIRAKVEELLK 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + L YP QLSGGQ+QR+A+ARAL EP++LLLDEP LDA +R E+R L+ +
Sbjct: 123 LVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLRDI 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
LG+T+I VTHDQ EAL ++D I V+ GKI Q G+ + +Y KP FV FLG
Sbjct: 183 HHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGE--T 240
Query: 240 NFVEARVEDG 249
+ E R+E G
Sbjct: 241 DAFEGRIEKG 250
>gb|AAA23639.1| (M32101) cysA [Escherichia coli]
Length = 365
Score = 221 bits (557), Expect = 1e-56
Identities = 118/259 (45%), Positives = 171/259 (65%), Gaps = 6/259 (2%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I + NI K FG L++I+L+I G+ +ALLGPSGSGK+TLL +AG+ TSG I F
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLEL---RKAPKDE-IDEKVRKVAK 119
DV+ L +DR +G VFQ++AL+ HMTV+ NIAF L + R+ P I KV K+ +
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLE 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
M+ + L DRYP +SGGQ+QRVA+ARAL EP++LLLDEP LDA +R E+R L++L
Sbjct: 123 MVQLAHLADRYPAHVSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQL 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+EL T+++VTHDQ EA +ADR+ V+ +G I Q PD+V+ +P +FV F+G +
Sbjct: 183 HEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGE--V 240
Query: 240 NFVEARVEDGKLLISENNY 258
N ++ + G+ + + +
Sbjct: 241 NRLQGTIRGGQFHVGAHRW 259
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 220 bits (556), Expect = 1e-56
Identities = 116/250 (46%), Positives = 162/250 (64%), Gaps = 6/250 (2%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I ++N+ K FGNF AL NINL + G+ ++LLGPSG GK+TLL +AG+ G I FD
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNILFD 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLEL----RKAPKDEIDEKVRKVAK 119
+DVT ++R +G VFQ++AL+ HM V+ N+AF L + + K +I KV ++ K
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQIRAKVEELLK 122
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + L YP QLSGGQ+QR+A+ARAL EP++LLLDEP LDA +R E+R L+ +
Sbjct: 123 LVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLRDI 182
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
LG+T+I VTHDQ EAL ++D I V+ GKI Q G+ + +Y KP FV FLG
Sbjct: 183 HHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGE--T 240
Query: 240 NFVEARVEDG 249
+ E R+E G
Sbjct: 241 DAFEGRIEKG 250
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 219 bits (551), Expect = 5e-56
Identities = 111/253 (43%), Positives = 170/253 (66%), Gaps = 2/253 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ + N+ K + A+D+++L I GE ALLG SG GKSTLL +AG +P++G+I D
Sbjct: 47 LEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLD 106
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D++++PP R I ++FQ++AL+PHMTV +NIAF L+ K PK EI +V ++ ++H+
Sbjct: 107 GVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHM 166
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
++ R P QLSGGQ+QRVA+AR+L K P++LLLDEP+ LD LR ++ E+ + + +
Sbjct: 167 QEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV 226
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG--NPPMNF 241
G+T + VTHDQ EA+ MA RIA++ GK +Q+G P+E+Y P ++ F+G N
Sbjct: 227 GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGV 286
Query: 242 VEARVEDGKLLIS 254
++ R EDG +L S
Sbjct: 287 LKERQEDGLVLDS 299
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 213 bits (536), Expect = 3e-54
Identities = 108/246 (43%), Positives = 165/246 (66%), Gaps = 7/246 (2%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
L+NI K FG +DN++L IK G + LLGPSG GK+T+L VAG+ PTSG+I+ D
Sbjct: 8 LKNITKSFGKATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGE 67
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
DVT+ ++R+I +VFQ++AL+PHM++ N+ + L ++ +E ++V++ +++ +
Sbjct: 68 DVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQGVSNEERKQRVKEALELVDLAG 127
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
DR+ Q+SGGQQQRVA+ARALV +P+VL+LDEPLSNLDA LR +R +++ LQ+ LGI
Sbjct: 128 FADRFVDQISGGQQQRVALARALVLKPKVLILDEPLSNLDANLRRSMREKIRELQQRLGI 187
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
T++YVTHDQ EA A++D + V+ +G I+Q Y + + F+G E+
Sbjct: 188 TSLYVTHDQTEAFAVSDEVIVMNKGTIMQKARQKIFIYDRILYSLRNFMG-------EST 240
Query: 246 VEDGKL 251
+ DG L
Sbjct: 241 ICDGNL 246
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 212 bits (534), Expect = 5e-54
Identities = 109/230 (47%), Positives = 160/230 (69%), Gaps = 2/230 (0%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNIG 78
L +I+L+I+ GEF +LLGPSG GK+TLL +AG + SG + RD+T +P R +
Sbjct: 21 LKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSGAVVIGGRDMTGIPAHRRPVN 80
Query: 79 LVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQ 138
VFQ++AL+PH++V N+AF L+ + E+ ++V + + + I + +R P QLSGGQ
Sbjct: 81 TVFQSYALFPHLSVADNVAFGLKQKGVRGAELRQRVERAMETVQIGQFGNRKPDQLSGGQ 140
Query: 139 QQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEAL 198
+QRVA+ARA+V +PEVLLLDEPLS LD LR +++ EL LQ++LGIT ++VTHDQ EAL
Sbjct: 141 RQRVALARAIVNQPEVLLLDEPLSALDLKLRKQLQVELSNLQEDLGITFVFVTHDQEEAL 200
Query: 199 AMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVED 248
M+DRIAV+ +G+I Q+G +++Y +P FV FLG+ N + RV +
Sbjct: 201 VMSDRIAVMNQGRIEQLGRAEDLYERPRTAFVANFLGS--SNLLAGRVAE 248
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 210 bits (528), Expect = 3e-53
Identities = 120/346 (34%), Positives = 199/346 (56%), Gaps = 14/346 (4%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
LEN+ K++GNF A+ +NL ++ GE +AL+GPSGSGK+T L + + +P GR+ + +
Sbjct: 11 LENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLINGQ 70
Query: 66 DVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
D++E+ RNIG V Q L+PHM V++NI +L +++I ++V ++ K++ +
Sbjct: 71 DISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLKLVDL 130
Query: 124 E-KLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
+ +RYPWQLSGGQQQRV +ARAL P +LL+DEP LD +LR +++ E R+++E
Sbjct: 131 PIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFARIKEE 190
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG--NPPMN 240
LG T ++VTHD EA + DRIA++ EG+++QVG P+E+ P +FV G +
Sbjct: 191 LGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVEDITGARRKFRH 250
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
+V+D +IS Y+ + + ++ + V +GF V G G++
Sbjct: 251 LDTLKVKD--FMISAEKYLIQNMEVAEALKEFRKRGVEVGFLDSGRAVFLKDIAGREGKI 308
Query: 301 YSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSV 346
+ ++ + + +DS+V E GE V + ++G V
Sbjct: 309 SEY----AREVKSFAPSDSLVSALLELRES---GEFVGVVEEKGEV 347
>pir||E75564 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457722|gb|AAF09652.1|AE001869_1
(AE001869) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 328
Score = 209 bits (527), Expect = 4e-53
Identities = 111/253 (43%), Positives = 168/253 (65%), Gaps = 1/253 (0%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ L + K FG A+ +++LE++ GE +ALLGPSG GKST+L +VAG+ +P +G++
Sbjct: 8 LSLRGLSKAFGAVQAVGDVSLEVQAGETLALLGPSGCGKSTVLRSVAGLERPDAGQVLVG 67
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
RDVT LPP+ R++GLVFQ++AL+PH++V N+A+ R + + + ++ R+ ++ +
Sbjct: 68 GRDVTALPPEARHLGLVFQDYALFPHLSVLDNVAYGPRRRGSSRPDAAQQAREALALVGL 127
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ R P QLSGGQQQRVA+ARAL +LLLDEPLSNLD LR E+R +L+ L +L
Sbjct: 128 SEHERRLPAQLSGGQQQRVALARALATRSPLLLLDEPLSNLDEKLRSELRHDLRGLFGQL 187
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G + VTHDQ EALA+A R+AV+R G ++Q G +++ +P +V FLG + F
Sbjct: 188 GAGVLLVTHDQREALALAHRVAVMRAGHVVQEGAAADLFARPATAWVAEFLGWTNV-FAH 246
Query: 244 ARVEDGKLLISEN 256
+V LL+ E+
Sbjct: 247 PQVSGQALLVPES 259
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 209 bits (526), Expect = 5e-53
Identities = 120/297 (40%), Positives = 181/297 (60%), Gaps = 25/297 (8%)
Query: 4 IRLENIVKKF----GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
++L+ IVK + G F A++ ++LEI GE +ALLGPSGSGK+TLL +AG+ + T G+
Sbjct: 8 VKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITEGK 67
Query: 60 IYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
I++D D T+ +DR IG VFQ +AL+ H+TV NIAF ++K D I ++V+++
Sbjct: 68 IFYDGEDATDWSLEDRQIGFVFQGYALFKHLTVGDNIAFGPRMKKMDID-IRKRVKELLD 126
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + L R+P QLSGGQ+QR+A+ARAL EP +LLLDEP LD +R ++R LKR+
Sbjct: 127 LVQLPGLESRFPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSLKRI 186
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
L +T++ VTHDQ EA +ADR+ V +G I QVG+ +++Y P FV F+G
Sbjct: 187 ISSLNLTSVMVTHDQEEAFEVADRVVVFNKGSIEQVGSLEDIYRNPQTAFVMDFVG---- 242
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGI 296
E N+IP + + ++ ++ K I+ FRP + E + E I
Sbjct: 243 ---------------EANHIPSRCVFAKRMKFISNKPQIM-FRPTEIEPYETFREDI 283
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 203 bits (510), Expect = 4e-51
Identities = 110/252 (43%), Positives = 159/252 (62%), Gaps = 9/252 (3%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTE----LPPKD 74
L IN + GE + LLGPSG GK+TLL +AG PTSG ++ + V+ PP+
Sbjct: 36 LQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGTVHLEGDCVSGENGLTPPEQ 95
Query: 75 RNIGLVFQNWALYPHMTVYKNIAFPL--ELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPW 132
R G+VFQ++AL+PH+T+ NIAF L + +K + +I +V +V ++ + L RYP
Sbjct: 96 RQTGMVFQDYALFPHLTITDNIAFGLRHKSQKLNRQQIQGRVAEVLHLVGLTGLEKRYPH 155
Query: 133 QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTH 192
+LSGGQQQR+A+ARAL +P ++LLDEPLSNLD +R +R E++ + K G I+VTH
Sbjct: 156 ELSGGQQQRIALARALAPKPNLILLDEPLSNLDVQVRQRLRHEIRHILKATGTAAIFVTH 215
Query: 193 DQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLL 252
DQ EA+A++DRI V+ G + Q+GTP+E+Y P +FV F+ NFV A+ G L
Sbjct: 216 DQEEAMAISDRIGVMYRGNLEQIGTPEEIYRSPASRFVAEFV--TQANFVPAQ-RQGTLW 272
Query: 253 ISENNYIPVPKQ 264
+E P+ Q
Sbjct: 273 ATEFGQWPLTFQ 284
>dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 349
Score = 203 bits (510), Expect = 4e-51
Identities = 136/358 (37%), Positives = 204/358 (55%), Gaps = 23/358 (6%)
Query: 4 IRLENIVKKFGNFI--ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
I+L ++ K F + + A+D+++L I+ GE +ALLGPSG GK+T L +AG +PTSG I
Sbjct: 4 IQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIK 63
Query: 62 FDERDVTE----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
V E +PP+ R IG+VFQ++AL+PH+T+ KN+ F L K E+ ++V
Sbjct: 64 IGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRERAKEV 121
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
+++ + RYP +LSGGQQQRVA+ARAL +P V+L+DEP SNLDA LR ++R E+
Sbjct: 122 LELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVT 181
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNP 237
+ ++ T I VTHDQ +A A+ADR+ V+ EG I Q+ TP E+Y P FV F+G
Sbjct: 182 TILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGK- 240
Query: 238 PMNFVEARV-EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG- 295
N + R+ ED + + + + +P Q ++E NVK + RP E K EG
Sbjct: 241 -TNLLSGRLCEDMRHVDTHIGRVSLPAQSEVMLE--NVK---VSIRP---EGCKLAEEGR 291
Query: 296 IVGEVYSFEPLGREQIVTVSVNDSIVK---VFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
G+V G Q V V++ + ++AP + G V+ + V L +
Sbjct: 292 FTGKVERVTYSGEYQEVVVNLGAGTTEPMILYAPIDQDVQPGIVVSFDITPELVALVE 349
>gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter; PotA2
[Halobacterium sp. NRC-1]
Length = 374
Score = 202 bits (509), Expect = 5e-51
Identities = 138/366 (37%), Positives = 199/366 (53%), Gaps = 36/366 (9%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+RL+ + K +G+ A+ ++ L ++ E L+GPSG GK+T L ++G PT G I +
Sbjct: 25 VRLDGVRKTYGDTTAVADLTLTLRRNELFTLVGPSGCGKTTTLRLISGFESPTEGTIRIN 84
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
T +PP+ R+ LVFQ AL+ HM+V +N+ + LE K P DE R+V L +
Sbjct: 85 GEPATGVPPERRDTNLVFQQHALFSHMSVAENVGYGLE--KDPDVGADEVARRVESALDL 142
Query: 124 EKLLD---RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L + R P LSGGQQQRVA+ARALV EP VLLLDEPLS+LD LR +++AEL+RL
Sbjct: 143 VNLTESGERSPGALSGGQQQRVALARALVNEPAVLLLDEPLSSLDRTLRKQMQAELRRLS 202
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+ + YVTHDQ A+A++DRI V+R+G+++QVGTP VY P FV F+G+ +
Sbjct: 203 DAVEGSFCYVTHDQELAMAVSDRIGVMRDGELVQVGTPAAVYRNPASPFVASFIGDTTL- 261
Query: 241 FVEARVE---DGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPH-----DAEVIKGI 292
V+ VE G ++ +++ VP + V RP D
Sbjct: 262 -VDGTVEPAAGGAPTLTVGDWVTVP------VATDATGTVTASIRPEMVARTDDAAADHA 314
Query: 293 SEGIVGE--------VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEG 344
E +V E Y P+G + VT++ SI AP + GE+VT + G
Sbjct: 315 FEAVVRERTFQGEAVRYRLAPVGAAEGVTLAA--SIRDTDAP----LSAGERVTAAI-TG 367
Query: 345 SVVLFD 350
V+FD
Sbjct: 368 DPVVFD 373
>dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans]
Length = 349
Score = 202 bits (508), Expect = 6e-51
Identities = 136/358 (37%), Positives = 204/358 (55%), Gaps = 23/358 (6%)
Query: 4 IRLENIVKKFGNFI--ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
I+L ++ K F + + A+D+++L I+ GE +ALLGPSG GK+T L +AG +PTSG I
Sbjct: 4 IQLRDLTKTFSHTLKPAVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIK 63
Query: 62 FDERDVTE----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
V E +PP+ R IG+VFQ++AL+PH+T+ KN+ F L K E+ ++V
Sbjct: 64 IGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMFGLS--KWGTRAKRERAKEV 121
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
+++ + RYP +LSGGQQQRVA+ARAL +P V+L+DEP SNLDA LR ++R E+
Sbjct: 122 LELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVT 181
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNP 237
+ ++ T I VTHDQ +A A+ADR+ V+ EG I Q+ TP E+Y P FV F+G
Sbjct: 182 TILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGK- 240
Query: 238 PMNFVEARV-EDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEG- 295
N + R+ ED + + + + +P Q ++E NVK + RP E K EG
Sbjct: 241 -TNLLSGRLCEDMRHVDTHIGRVSLPAQSGVMLE--NVK---VSIRP---EGCKLAEEGR 291
Query: 296 IVGEVYSFEPLGREQIVTVSVNDSIVK---VFAPEGEHFNFGEKVTIKLKEGSVVLFD 350
G+V G Q V V++ + ++AP + G V+ + V L +
Sbjct: 292 FTGKVERVTYSGEYQEVVVNLGAGTTEPMILYAPIDQDVQPGIVVSFDITPELVALVE 349
>gb|AAB01532.1| (U38418) ProV [Bacillus subtilis]
Length = 404
Score = 201 bits (505), Expect = 1e-50
Identities = 101/237 (42%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
+R LENI G A++N+NL+I GEF+ +GPSG GK+T + + + +P++G+I+
Sbjct: 5 IRKCLENIK---GGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIF 61
Query: 62 FDERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
D ++ E P++ R IG VFQ L+PHMT+ +NI+ +L K P+ E+ R++ K
Sbjct: 62 IDGENIMEQDPEELRRKIGYVFQQIGLFPHMTIQQNISLVPKLLKWPEQHRKERARELLK 121
Query: 120 MLHI-EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++ + + LDRYP +LSGGQQQR+ + RAL +EP ++L+DEP LD + R ++ E K+
Sbjct: 122 LVDMGPEYLDRYPHELSGGQQQRIGVLRALAREPPLILMDEPFGALDPITRDSLQEEFKK 181
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
LQK L T ++VTHD EA+ +ADRI +++ G+I+QVGTPD++ P +FV F+G
Sbjct: 182 LQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIG 238
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 200 bits (504), Expect = 2e-50
Identities = 121/343 (35%), Positives = 198/343 (57%), Gaps = 32/343 (9%)
Query: 4 IRLENIVKKF-GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
++LE + K + G A+++I+L+I GEF+ +GPSG GK+T + + + +P+SGRI+
Sbjct: 2 LKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIFI 61
Query: 63 DERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
D ++ E P + R IG V Q L+PHMT+ +NI+ +L K P+++ E+ R++ K+
Sbjct: 62 DGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLKL 121
Query: 121 LHI-EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+ + + LDRYP +LSGGQQQR+ + RAL EP ++L+DEP LD + R ++ E K+L
Sbjct: 122 VDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKL 181
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG---- 235
Q+ L T ++VTHD EA+ +ADRI +++ G+I+QVGTPDE+ P +FV F+G
Sbjct: 182 QRTLNKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGKERL 241
Query: 236 ---NPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPH------DA 286
P + VE + + +S + + Q Q++ V +++ R + D
Sbjct: 242 IQSRPDIERVEQMMNRTPVTVSADKTL---SQAIQLMREKRVDSLLVVDRQNVLKGYVDV 298
Query: 287 EVI--KGISEGIVGEVYSFEPLGREQIVTVS----VNDSIVKV 323
E+I IVG+VY R I TV + D++ K+
Sbjct: 299 EMIDQNRKKASIVGDVY------RSDIYTVQKGALLRDTVRKI 335
>pir||T03479 probable ABC transporter ATP-binding protein - Rhodobacter
capsulatus >gi|3128280|gb|AAC16132.1| (AF010496)
hypothetical ABC transporter ATP-binding protein
[Rhodobacter capsulatus]
Length = 358
Score = 200 bits (503), Expect = 2e-50
Identities = 111/253 (43%), Positives = 158/253 (61%), Gaps = 8/253 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+RL+ + ++FG AL I+ + GE + LLG SG GKSTLL +AG+ +P SG I
Sbjct: 12 LRLDRVSRRFGAVTALAEISFNLGQGEILCLLGASGCGKSTLLRLIAGVERPDSGEIVLA 71
Query: 64 ERDVTE----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
R + + P+ R IG +FQ++AL+PH++V +N+AF L R AP E+ +V +V
Sbjct: 72 GRVLAGPGRFVDPEARGIGFMFQDYALFPHLSVAENVAFGL--RGAPSAELKARVAEVLA 129
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+ + L DRYP QLSGG+ QRVA+ARAL P +LL+DEP SNLD LR VRAE L
Sbjct: 130 VAGVSALADRYPHQLSGGESQRVALARALAPRPGLLLMDEPFSNLDQGLRDSVRAETLAL 189
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+++G+ I VTHD AEALA+AD +AV++ GKI + P +Y+ P + FLG P
Sbjct: 190 LRQIGVAAILVTHDPAEALAVADHLAVMQAGKIEALADPRSLYHAPPTLYAARFLG--PG 247
Query: 240 NFVEARVEDGKLL 252
+ + +V G L+
Sbjct: 248 STLPGQVAGGALV 260
>gb|AAF04258.1|AF139575_1 (AF139575) BusAA [Lactococcus lactis]
Length = 407
Score = 199 bits (502), Expect = 3e-50
Identities = 107/261 (40%), Positives = 164/261 (61%), Gaps = 21/261 (8%)
Query: 9 IVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVT 68
I+KK G + + + N EI +GE ++G SGSGKSTLL + + +PTSG+I+ D++DV
Sbjct: 34 ILKKTGATVGVYDTNFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDDQDVA 93
Query: 69 ELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
L +D +++ +VFQN+ L+PH T+ +N + LE++ PK+E ++ K +
Sbjct: 94 TLNKEDLLQVRRKSMSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNAN 153
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
+ D+YP QLSGG QQRV +ARAL +PE+LL+DE S LD L+R E++ EL LQ +
Sbjct: 154 LLDFKDQYPKQLSGGMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAK 213
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
T I+V+HD EAL + DRIA++++GKI+Q+GT +E+ L NP ++V
Sbjct: 214 FQKTIIFVSHDLNEALRIGDRIAIMKDGKIMQIGTGEEI------------LTNPANDYV 261
Query: 243 EARVED---GKLLISENNYIP 260
+ VED K++ +EN IP
Sbjct: 262 KTFVEDVDRAKVITAENIMIP 282
>gb|AAF40473.1|AF184955_1 (AF184955) OpuAA [Lactococcus lactis]
Length = 407
Score = 199 bits (502), Expect = 3e-50
Identities = 107/261 (40%), Positives = 164/261 (61%), Gaps = 21/261 (8%)
Query: 9 IVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVT 68
I+KK G + + + N EI +GE ++G SGSGKSTLL + + +PTSG+I+ D++DV
Sbjct: 34 ILKKTGATVGVYDTNFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDDQDVA 93
Query: 69 ELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
L +D +++ +VFQN+ L+PH T+ +N + LE++ PK+E ++ K +
Sbjct: 94 TLNKEDLLQVRRKSMSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNAN 153
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
+ D+YP QLSGG QQRV +ARAL +PE+LL+DE S LD L+R E++ EL LQ +
Sbjct: 154 LLDFKDQYPKQLSGGMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAK 213
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
T I+V+HD EAL + DRIA++++GKI+Q+GT +E+ L NP ++V
Sbjct: 214 FQKTIIFVSHDLNEALRIGDRIAIMKDGKIMQIGTGEEI------------LTNPANDYV 261
Query: 243 EARVED---GKLLISENNYIP 260
+ VED K++ +EN IP
Sbjct: 262 KTFVEDVDLAKVITAENIMIP 282
>gb|AAF37878.1|AF234619_1 (AF234619) OpuAA [Lactococcus lactis]
Length = 408
Score = 198 bits (499), Expect = 7e-50
Identities = 107/261 (40%), Positives = 162/261 (61%), Gaps = 21/261 (8%)
Query: 9 IVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVT 68
I+KK G + + + N EI +GE ++G SGSGKSTLL + + +PTSG+I+ D +DV
Sbjct: 34 ILKKTGATVGVYDTNFEINEGEIFVIMGLSGSGKSTLLRLLNRLIEPTSGKIFIDNQDVA 93
Query: 69 ELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
L +D + + +VFQN+ L+PH T+ +N + LE++ PK+E ++ K +
Sbjct: 94 TLNKEDLLQVRRKTMSMVFQNFGLFPHRTILENTEYGLEVQNVPKEERRKRAEKALDNAN 153
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
+ D+YP QLSGG QQRV +ARAL +PE+LL+DE S LD L+R E++ EL LQ +
Sbjct: 154 LLDFKDQYPKQLSGGMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLELQAK 213
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
T I+V+HD EAL + DRIA++++GKI+Q+GT +E+ L NP ++V
Sbjct: 214 FQKTIIFVSHDLNEALRIGDRIAIMKDGKIMQIGTGEEI------------LTNPANDYV 261
Query: 243 EARVED---GKLLISENNYIP 260
+ VED K++ +EN IP
Sbjct: 262 KTFVEDVDRAKVITAENIMIP 282
>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 198 bits (498), Expect = 9e-50
Identities = 118/346 (34%), Positives = 191/346 (55%), Gaps = 13/346 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ + ++ FG+ L N++L + E + LLG SG GK+TLL +AG+ G I+
Sbjct: 4 LTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLPIEQGDIHLA 63
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+ ++R IGL+FQ++AL+PH+TV NI F L K PK + K+ ++H+
Sbjct: 64 GECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLS--KLPKVQQKAITEKMLSVVHL 121
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
+ R+P +LSGGQQQRVAIARAL +PE+LLLDEP SN+D+ R + E+K++ K
Sbjct: 122 QGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFSNIDSQTRYAMIQEIKQILKSQ 181
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
+ I+VTH + EA A AD+IAV+ +GKI+Q G P+E+Y+ P+ FV FLG N++
Sbjct: 182 NVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNELYHSPVNPFVADFLGG--TNYLN 239
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEVYSF 303
V +E+N + P ++ +NV+ + ++I +E +G+V
Sbjct: 240 CNV-------TEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQIILKPNELGLGKVVGK 292
Query: 304 EPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSVVLF 349
LG V + +++ + + GE+V + + +LF
Sbjct: 293 LFLGLYYRYQVEIKG--IEIVTYQSQELKIGEQVEVGFQVREFILF 336
>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
>gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 348
Score = 193 bits (486), Expect = 2e-48
Identities = 115/282 (40%), Positives = 162/282 (56%), Gaps = 3/282 (1%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ LE +FG LD++ L + + E + +LGPSGSGKSTLL VAG+ +GR+ D
Sbjct: 6 LSLEGATVRFGGRAVLDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQPLDAGRVTLD 65
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
RD + +P R +GL+FQ+ L+P V NIAF +R A + E +V ++ +++ +
Sbjct: 66 GRDQSGVPAHKREVGLMFQDHQLFPQRDVAGNIAFGPRMRGASRAEQQARVAELLQLVGL 125
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
R LSGG+QQRVA+ARAL P +L+LDEPL LD LR + EL+ L L
Sbjct: 126 PGAARRSVAALSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVVELRELFGRL 185
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
G T + VTHDQ EA A+ADR+ V+R+G+I Q GTP EV+ +P FV FLG N E
Sbjct: 186 GTTVLAVTHDQGEAFALADRVVVMRDGRIAQSGTPLEVWQRPADAFVARFLGFE--NVAE 243
Query: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHD 285
A V G+ + +PVP+ Q + V+ + P D
Sbjct: 244 ASVA-GQAADTPWGKVPVPEDAPQGTRTVLVRPAGVRVVPAD 284
>pir||C69223 anion permease - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
permease [Methanobacterium thermoautotrophicum]
Length = 357
Score = 189 bits (474), Expect = 6e-47
Identities = 111/344 (32%), Positives = 190/344 (54%), Gaps = 15/344 (4%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
++N+ G F+ + L + G+++ ++GP+GSGKS L T+ G ++P SG I D
Sbjct: 6 IDNLEIDLGEFVVRVD-ELHLSRGDYLVIIGPTGSGKSIFLETIMGFFEPISGTISLDGA 64
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEK 125
D+T LPP++R++ +V+Q+ L+PHMTV +NIA+ L + K+ I +V ++A M+ I+
Sbjct: 65 DLTTLPPEERDVSIVYQDHCLFPHMTVEENIAYGLRKQTEMKENIHRQVHEIAAMMGIDH 124
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
+L+RYP LSGG+ QR +IARA++ P +LL+DEP S LD ++ +R + ++
Sbjct: 125 VLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEPFSALDQRTKISLRKLIADIRDNFET 184
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEAR 245
T I+VTHD + +++++AV+ GKI+Q+G +EV KP FV FLG N +E
Sbjct: 185 TVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGKKEEVINKPSPYFVADFLG---ANILEGT 241
Query: 246 VED-----GKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDA---EVIKGISEGIV 297
V+ + ++ N + V +I + ++++I P A + KG E I+
Sbjct: 242 VKGQVNGLTSVNVNSNIFRTVDCGEGSVILSIRPENIMIAADPFMASAQNIFKGTVEDII 301
Query: 298 GE---VYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVT 338
VY +G + + ++ ++ GE F K T
Sbjct: 302 ETSRIVYVNLRIGDIVLTSAVTPGAVTELGIRTGEEFQVLIKAT 345
>sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187
>gi|1361456|pir||G64220 ATP-binding protein msmK homolog
- Mycoplasma genitalium >gi|3844784|gb|AAC71406.1|
(U39698) ABC transporter, ATP-binding protein
[Mycoplasma genitalium]
Length = 585
Score = 183 bits (461), Expect = 2e-45
Identities = 96/252 (38%), Positives = 161/252 (63%), Gaps = 8/252 (3%)
Query: 107 KDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDA 166
K I++ +VA L I K+L + P ++SGGQQQRVAIARA+V+ P++LL+DEPLSNLDA
Sbjct: 341 KQFINKTALEVANKLAITKILTKRPDKISGGQQQRVAIARAIVRRPKLLLMDEPLSNLDA 400
Query: 167 LLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPM 226
LR++ R +++ Q+EL ITT++VTHDQ EA++++D I + GK+ Q+GTP E+Y KP
Sbjct: 401 KLRVQTRQWIRQFQQELQITTVFVTHDQEEAMSISDVIVCMSTGKVQQIGTPSELYLKPA 460
Query: 227 YKFVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDA 286
+FV FLG P MN +E V++ +L NN++ V + + +LNV+ +++GFR ++
Sbjct: 461 NEFVARFLGTPEMNIIECSVKNNQLF--WNNHLLVTESF-----KLNVEKLLVGFR-YEQ 512
Query: 287 EVIKGISEGIVGEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKEGSV 346
V+ + ++ + E LG+ + T+S+ D+ + + H G+ + +K ++
Sbjct: 513 LVVTTNKSSLQAKLINIENLGKHLVATISLFDTTLSMRLELNSHLKVGDSLNFIIKANNL 572
Query: 347 VLFDKKSEKALE 358
FD +++ +E
Sbjct: 573 HFFDIDTKQRIE 584
Score = 125 bits (310), Expect = 1e-27
Identities = 58/110 (52%), Positives = 81/110 (72%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I L+NIV FG +A+DNINL ++ + ++LLGPSG GK+T L +AG+ KPTSG++ F+
Sbjct: 8 IELKNIVVDFGESVAIDNINLSVEKHQLVSLLGPSGCGKTTTLAVIAGLIKPTSGQVLFN 67
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEK 113
DVT+ PP++R +GLVFQN+ALYPHM V++NI FPL + K + EK
Sbjct: 68 GYDVTKKPPQERKLGLVFQNYALYPHMNVFENIVFPLYSDNSWKQAVLEK 117
>gi|11497712 sulfate ABC transporter, ATP-binding protein (cysA) [Archaeoglobus
fulgidus] >gi|7445689|pir||D69261 sulfate ABC
transporter, ATP-binding protein (cysA) homolog -
Archaeoglobus fulgidus >gi|2650556|gb|AAB91137.1|
(AE001100) sulfate ABC transporter, ATP-binding protein
(cysA) [Archaeoglobus fulgidus]
Length = 240
Score = 180 bits (451), Expect = 3e-44
Identities = 97/222 (43%), Positives = 149/222 (66%), Gaps = 10/222 (4%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDG-EFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
+++R E K+ GNF +N++ + G ++ LLGP+G+GKS L +AGI KP G +
Sbjct: 3 LKVRAE---KRLGNF----RLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEV 55
Query: 61 YFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
+ D+T LPP+ R IG V Q++AL+PH++VY+NIA+ L R + E D +VR++A+
Sbjct: 56 RLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGL--RNVERVERDRRVREMAEK 113
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
L I LLDR P +LSGG++QRVA+ARALV +P +LLLDEPLS +D + + EL+ +Q
Sbjct: 114 LGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQ 173
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
+E + ++VTHD EA +AD +AV+ G+I++ G E++
Sbjct: 174 REFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELF 215
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 178 bits (448), Expect = 7e-44
Identities = 99/220 (45%), Positives = 146/220 (66%), Gaps = 9/220 (4%)
Query: 2 VRIRLENIVKKF---GNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTS 57
V++++EN+ K F GN + ALDNINLE+ + EF+ ++GPSG GK+TLL +AG+ PT
Sbjct: 15 VKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTE 74
Query: 58 GRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
G++ D ++V P DR G+VFQ + L P TV KN+ F LEL+ PK+E E +K
Sbjct: 75 GKVLLDGKEVKG-PGADR--GVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKF 131
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
KM+ +E D YP+QLSGG QQRVAIAR L +PE++L+DEP + LDA R ++ EL
Sbjct: 132 IKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELL 191
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVI--REGKILQV 215
++ ++ T +VTH EA+ ++DR+ V+ R G+I ++
Sbjct: 192 KIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEI 231
>sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187 HOMOLOG
(E07_ORF586) >gi|2146652|pir||S73346
sn-glycerol-3-phosphate transport system permease ugpC -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673667|gb|AAB95668.1| (AE000003)
sn-glycerol-3-phosphate transport system permease
protein [Mycoplasma pneumoniae]
Length = 586
Score = 177 bits (445), Expect = 1e-43
Identities = 101/255 (39%), Positives = 153/255 (59%), Gaps = 12/255 (4%)
Query: 107 KDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDA 166
KD I+ ++VA+ L I K+L + P +SGGQQQRVAIARA+V+ P+VLL+DEPLSNLDA
Sbjct: 337 KDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDA 396
Query: 167 LLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPM 226
LR++ R +++ Q++L ITT++VTHDQ EA++++D I + GK+ Q+G+P E+Y KP
Sbjct: 397 KLRVQTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPA 456
Query: 227 YKFVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKD--VIIGFRPH 284
+FV FLG+P MN V A V+ G+LL +EN P+ K + ++ D + +GFR
Sbjct: 457 NEFVATFLGSPEMNIVNATVKAGQLLWNEN---PLVK------TKFDLPDGAIRVGFRYD 507
Query: 285 DAEVIKGISEGIV-GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNFGEKVTIKLKE 343
+ K + G + S E LG+ + V N + V F G V +K
Sbjct: 508 EVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQLNVRLELSHQFEVGNAVKFTIKP 567
Query: 344 GSVVLFDKKSEKALE 358
+ FD ++ + +E
Sbjct: 568 NGLHFFDPQTTQRVE 582
Score = 122 bits (304), Expect = 5e-27
Identities = 59/110 (53%), Positives = 79/110 (71%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I +NIV FG IA+DNINL +K E + LLGPSG GK+T L +AG+ PTSG++ F+
Sbjct: 13 IEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFN 72
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEK 113
DVT+ PP+ R +GLVFQN+ALYPHM+V++NI FPL + ++ I EK
Sbjct: 73 GYDVTKKPPQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTSWREAIFEK 122
>pir||D81435 probable iron-uptake ABC transport system ATP-binding protein
Cj0173c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967666|emb|CAB72656.1| (AL139074) putative
iron-uptake ABC transport system ATP-binding protein
[Campylobacter jejuni]
Length = 302
Score = 176 bits (441), Expect = 4e-43
Identities = 105/259 (40%), Positives = 160/259 (61%), Gaps = 20/259 (7%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ ++N+ K FG AL+NINL +K+GEF+++LG SGSGKSTLL +A + + +S ++
Sbjct: 3 LEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTLLRIIAKLEQASSYDLFSC 62
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
+ +V L+FQN+AL+PH+ V KNI F L +K K++I + + K I
Sbjct: 63 KGEVA----------LMFQNYALFPHLNVEKNILFALYDKK-DKNQI---LNHLLKTFEI 108
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E L + ++SGGQ QRVA ARA+ + ++LLLDEP SNLD L+ ++R ELK++ +
Sbjct: 109 EDLRYKKIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRRELKKMIENQ 168
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
GIT I VTHD +A M+D+IA + +GKIL P E+Y+KP +K P +N +E
Sbjct: 169 GITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL---PDLNIIE 225
Query: 244 ARV---EDGKLLISENNYI 259
++ ++ I+ NYI
Sbjct: 226 EKLDLEDEFFAWIASKNYI 244
>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
>gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
[Yersinia enterocolitica]
Length = 349
Score = 173 bits (433), Expect = 4e-42
Identities = 96/240 (40%), Positives = 145/240 (60%), Gaps = 8/240 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + I K + + L+ I+L++ G A++GPSGSGK+TLL +AG P SG++
Sbjct: 1 MSTLDFNKIGKSYQSVRVLEGIDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFETPDSGKV 60
Query: 61 YFDERDV----TELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
+ T +P R IG V Q+ AL+PH T NIA+ L K K + ++ K
Sbjct: 61 ILQGNPLFDQSTHVPAHKRGIGFVPQDGALFPHFTAAGNIAYGL---KGSKQDKARRIDK 117
Query: 117 VAKMLHIEKLLDR-YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
+ +M+ +++ L + +P ++SGGQQQRVA+ARAL + P ++LL EP S LD LR R
Sbjct: 118 LMEMVALDRRLAQLWPHEISGGQQQRVALARALGQRPALMLLVEPFSTLDTALRASTRKA 177
Query: 176 LKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
+ L + I +I VTHDQ+EAL+ AD++AV+R GK++ VG P E+Y +P+ + FLG
Sbjct: 178 VAELLSQANIASILVTHDQSEALSFADQVAVMRAGKLVHVGAPQELYLRPIDEPTATFLG 237
>sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC >gi|72462|pir||QRSEUC
nucleotide-binding protein sfuC - Serratia marcescens
>gi|152862|gb|AAA26575.1| (M33815) iron transport
protein (sufC) [Serratia marcescens]
Length = 345
Score = 172 bits (431), Expect = 6e-42
Identities = 98/240 (40%), Positives = 145/240 (59%), Gaps = 8/240 (3%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + L I K + L++I+L++ G A++GPSGSGK+TLL +AG P G+I
Sbjct: 1 MSTLELHGIGKSYNAIRVLEHIDLQVAAGSRTAIVGPSGSGKTTLLRIIAGFEIPDGGQI 60
Query: 61 YFDERDVTE----LPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
+ + +P R IG V Q+ AL+PH TV NI F L K K E ++
Sbjct: 61 LLQGQAMGNGSGWVPAHLRGIGFVPQDGALFPHFTVAGNIGFGL---KGGKREKQRRIEA 117
Query: 117 VAKMLHIEKLLDR-YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
+ +M+ +++ L +P +LSGGQQQRVA+ARAL ++P ++LLDEP S LD LR R
Sbjct: 118 LMEMVALDRRLAALWPHELSGGQQQRVALARALSQQPRLMLLDEPFSALDTGLRAATRKA 177
Query: 176 LKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
+ L E + +I VTHDQ+EAL+ AD++AV+R G++ QVG P ++Y +P+ + FLG
Sbjct: 178 VAELLTEAKVASILVTHDQSEALSFADQVAVMRSGRLAQVGAPQDLYLRPVDEPTASFLG 237
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 168 bits (420), Expect = 1e-40
Identities = 90/239 (37%), Positives = 147/239 (60%), Gaps = 6/239 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++ + ++ K+FG L + ++++ GE + ++GPSGSGKSTLL + + +PTSG+I
Sbjct: 1 MAQLEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKI 60
Query: 61 YFDERDVT----ELPPKDRNIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDEIDEKVR 115
D D+T ++ + IG+VFQ + L+PH+T +N+ P++++K K E +E
Sbjct: 61 LLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGM 120
Query: 116 KVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
++ + + +E D YP QLSGGQQQRVAIARAL PEV+L DE S LD L EV
Sbjct: 121 RLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDV 180
Query: 176 LKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
+K+L ++ G+T + VTH+ A + DR+ + G I++ G P++++ P ++ FL
Sbjct: 181 MKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNPKHERTRKFL 238
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 164 bits (412), Expect = 1e-39
Identities = 89/228 (39%), Positives = 146/228 (64%), Gaps = 4/228 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +++E++ K FG L I+LE+K GE ++++GPSGSGKSTLL + + + G+I
Sbjct: 1 MTVLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKI 60
Query: 61 YFDERDVTE--LPPKDRNIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDEIDEKVRKV 117
YF +T + +IG+VFQ + L+PH++V N+ P++++ KDE EK +K+
Sbjct: 61 YFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEKAKKL 120
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
+ + + + ++ P LSGGQQQRVAIARAL+ +PE++L DEP S LD L EV +K
Sbjct: 121 LERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLDVIK 180
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKP 225
L + G+T + VTH+ A ++DR+ + EG+I+++G P++++ P
Sbjct: 181 DLAQS-GMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFSNP 227
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 157 bits (394), Expect = 1e-37
Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 1/222 (0%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I +EN+VKK+G+F A+ I+ ++K GE A LGP+G+GK+T ++ + + KPTSG+
Sbjct: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
Query: 61 YFDERDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
DV + P + R IG+VFQ+ +L +T Y+N+ + E+ EK+ ++ K
Sbjct: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+ + + DR SGG Q+R+ IARAL+ EPE+L LDEP LD R + ++ +
Sbjct: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
++E +T TH EA +ADRIA+I GKI+ GT +E+
Sbjct: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
>gb|AAA92009.1| (U37409) ABC multiple sugar transport protein [Lactococcus lactis]
Length = 189
Score = 157 bits (393), Expect = 2e-37
Identities = 79/180 (43%), Positives = 118/180 (64%), Gaps = 12/180 (6%)
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+L + LLDR P LSGGQ+QRVA+ RA+V++ +V L+DEPLSNLDA LR+ +R E+ ++
Sbjct: 2 ILGLTDLLDRKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRTEIAKI 61
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIRE----------GKILQVGTPDEVYYKPMYKF 229
+ +G TTIYVTHDQ EA+ +ADRI ++ G++ Q+GTP +Y +P KF
Sbjct: 62 HRRIGATTIYVTHDQTEAMTLADRIVIMSSSPNSDKTGTVGRVEQIGTPQGLYNEPANKF 121
Query: 230 VGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNV--KDVIIGFRPHDAE 287
V GF+G+P MNF +V GKL +E + +P+ ++++ K+VI+G RP D +
Sbjct: 122 VAGFIGSPAMNFFNVKVTGGKLTNNEGLNMDLPEGKAKLLKEQGYEGKEVILGIRPEDIQ 181
>dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 264
Score = 157 bits (392), Expect = 2e-37
Identities = 90/221 (40%), Positives = 137/221 (61%), Gaps = 12/221 (5%)
Query: 1 MVRIRLENIVKKF------GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYK 54
M + ++++ K F ++ +NINLEI GEF++LLGPSG GKSTLL VAG+ K
Sbjct: 1 MASVMIKDVGKTFEGKEEQSSYQVFENINLEIHSGEFVSLLGPSGCGKSTLLNIVAGLEK 60
Query: 55 PTSGRIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
++G +Y + V E P DR G+VFQ AL P +TV N+ F + ++ K+E ++
Sbjct: 61 ASNGAVYVGQNKVIE-PGPDR--GVVFQEAALMPWLTVLDNVVFAIR-KQYNKEEAKKRA 116
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
+ K++H+ K YP +LSGG +QRVAIARAL +P+VLL+DEP LD R +
Sbjct: 117 LEYLKLVHLSKFTHSYPHELSGGMKQRVAIARALALDPDVLLMDEPFGALDEQTRSMLHR 176
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAV--IREGKIL 213
EL+ + ++ T I+VTH+ EA+ ++D+I + +R G I+
Sbjct: 177 ELQAIWQQTKKTIIFVTHNIREAILLSDKIFLMGVRPGGII 217
>sp|Q52666|BZTD_RHOCA GLUTAMATE/GLUTAMINE/ASPARTATE/ASPARAGINE TRANSPORT ATP-BINDING
PROTEIN BZTD >gi|7442514|pir||S77604
glutamate/glutamine/aspartate/asparagine transport
protein - Rhodobacter capsulatus
>gi|1655715|gb|AAB17889.1| (U37407) BztD [Rhodobacter
capsulatus]
Length = 263
Score = 155 bits (388), Expect = 7e-37
Identities = 87/238 (36%), Positives = 146/238 (60%), Gaps = 6/238 (2%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
+ I++ + K +G F L +INL + GE + + GPSGSGKST++ + + + SG+I
Sbjct: 21 IAIQISQMNKWYGQFHVLRDINLTVHRGERIVIAGPSGSGKSTMIRCINRLEEHQSGKII 80
Query: 62 FDERDVT-ELPPKDR---NIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDEIDEKVRK 116
D ++T +L D+ +G+VFQ++ L+PH+T+ +N+ P+ +RK PK E +E
Sbjct: 81 VDGIELTSDLKNIDKVRSEVGMVFQHFNLFPHLTILENLTLAPIWVRKVPKREAEETAMY 140
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ + I + +YP QLSGGQQQRVAIAR+L +P+++L DEP S LD + EV +
Sbjct: 141 YLEKVKIPEQAQKYPGQLSGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMIKEVLDTM 200
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
+L +E G+T + VTH+ A A+A+R+ + +G+I++ P + ++ P + FL
Sbjct: 201 IQLAEE-GMTMLCVTHEMGFAQAVANRVIFMADGQIVEQNNPHDFFHNPQSERTKQFL 257
>gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius]
Length = 245
Score = 153 bits (384), Expect = 2e-36
Identities = 83/220 (37%), Positives = 137/220 (61%), Gaps = 9/220 (4%)
Query: 1 MVRIRLENIVKKFGNFI--ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
M ++ L+++ KK+ N + ALD+INL ++ GEF+A++G SGSGK+TLL + I K SG
Sbjct: 1 MKQLVLKDVCKKYPNQLNYALDHINLIVEKGEFVAVMGRSGSGKTTLLNVTSIIDKIDSG 60
Query: 59 RIYFDERDVTELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDE 112
IY +++++ K+ +IG VFQ++ L +T+ +NI+ L L+ +ID+
Sbjct: 61 NIYCADKEISTFSDKEATNFRKNDIGFVFQDYMLLDSLTIRENISVALSLKNVDSSKIDD 120
Query: 113 KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV 172
+ AK ++ + L +YP+QLSGGQ+QRV+I RA++K+PE++ DEP LD E
Sbjct: 121 LINSYAKRFNLYEQLKKYPYQLSGGQRQRVSIIRAIIKDPEIIFADEPTGALDLKSSEET 180
Query: 173 RAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKI 212
L + K +T + VTHD A + ADR+ ++++GK+
Sbjct: 181 MMILSEINKTEKVTILMVTHDVLSA-SYADRVILLKDGKL 219
>emb|CAC09552.1| (AL442120) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 262
Score = 153 bits (382), Expect = 4e-36
Identities = 92/225 (40%), Positives = 134/225 (58%), Gaps = 19/225 (8%)
Query: 2 VRIRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTS 57
V R +VK +G+ +ALD+++++I G+F A++GPSGSGKSTL++ +AG+ T
Sbjct: 19 VAARARQVVKAYGSGETRVVALDHVDVDIARGQFTAIIGPSGSGKSTLMHCLAGLDTVTG 78
Query: 58 GRIYFDERDVTELPPK-------DRNIGLVFQNWALYPHMTVYKNIAFPLEL--RKAPKD 108
G+IY DE ++T L K DR IG +FQ + L P + +NI P+++ RK +
Sbjct: 79 GQIYLDETEITGLKDKKLTQLRRDR-IGFIFQAFNLLPTLNAIENITLPMDIAGRKYDRA 137
Query: 109 EIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALL 168
+D V V + L P QLSGGQQQRVA+ARAL +PE++ DEP NLD+
Sbjct: 138 WLDRVVETVG----LAGRLKHRPTQLSGGQQQRVAVARALAAQPEIIFGDEPTGNLDSRA 193
Query: 169 RLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKIL 213
EV L+R ELG T + VTHD A + ADR+ + +G+I+
Sbjct: 194 GAEVLGFLRRSVTELGQTIVMVTHDPV-AASYADRVLYLADGRIV 237
>sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP
>gi|1154897|emb|CAA57936.1| (X82596) general amino acid
ABC type transporter [Rhizobium leguminosarum]
Length = 257
Score = 152 bits (379), Expect = 8e-36
Identities = 85/238 (35%), Positives = 142/238 (58%), Gaps = 6/238 (2%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V + + N+ K +G+F L +INL++ GE + + GPSGSGKST++ + + + G+I
Sbjct: 16 VAVEIVNMNKWYGDFHVLRDINLKVMRGERIVIAGPSGSGKSTMIRCINRLEEHQKGKIV 75
Query: 62 FDERDVT----ELPPKDRNIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDEIDEKVRK 116
D ++T ++ R +G+VFQ++ L+PH+T+ +N P+ +RK PK + +E
Sbjct: 76 VDGTELTNDLKKIDEVRREVGMVFQHFNLFPHLTILENCTLAPIWVRKMPKKQAEEVAMH 135
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
K + I + ++YP QLSGGQQQRVAIAR+L P+++L DEP S LD + EV +
Sbjct: 136 FLKRVKIPEQANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEPTSALDPEMIKEVLDTM 195
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
L +E G+T + VTH+ A +A+R+ + +G+I++ P + P ++ FL
Sbjct: 196 VGLAEE-GMTMLCVTHEMGFARQVANRVIFMDQGQIVEQNEPAAFFDNPQHERTKLFL 252
>emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 270
Score = 151 bits (378), Expect = 1e-35
Identities = 82/219 (37%), Positives = 134/219 (60%), Gaps = 9/219 (4%)
Query: 3 RIRLENIVKKFG----NFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
+I ++++ K F F ALD+++L+I + EF+ ++GPSG GKSTL+ +AG+ PTSG
Sbjct: 7 KISVQHVTKTFSLGRETFTALDDVSLDIANHEFVTVVGPSGCGKSTLMNILAGLEAPTSG 66
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
R D V+ P+ G++FQ +AL+P +TV +N+ F L PK E +
Sbjct: 67 RALVDGAPVSGPGPER---GVIFQQYALFPWLTVRQNVEFGLRTTGVPKRERRARAEHFI 123
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
+++ +E+ D P LSGG +QR AIARA +P +LL+DEP LDAL R++++ +L +
Sbjct: 124 ELVGLERFADALPKTLSGGMRQRCAIARAYAVDPSILLMDEPFGALDALTRVKLQEQLLK 183
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVI--REGKILQV 215
+ T +++THD EA+ +A+R+ V+ R G++ V
Sbjct: 184 TWSQDRRTVLFITHDVDEAVFLANRVVVMAARPGRVYDV 222
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 149 bits (372), Expect = 5e-35
Identities = 104/353 (29%), Positives = 184/353 (51%), Gaps = 23/353 (6%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
I L I K +G+ L+++NL++++GE + ++GP+G+GKSTLL + + +P G I F
Sbjct: 5 IELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEILFM 64
Query: 64 ERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
+V +L P + R +G+VFQN ++ TV ++I + +R E +V+ V + +
Sbjct: 65 GENVDDLKPLEVRRRMGMVFQNTPVF-RGTVAESILYGPRIRGERPHE--SEVKDVLETM 121
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
++ R +LSGG++QR+A+A+ L+ PEV+LLDE S+LD + R+ ++ +
Sbjct: 122 GLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPI----SRSRMEDVIA 177
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
EL +T I+ THD + +ADRIA++ ILQ G P E++ KP +FV F+G M
Sbjct: 178 ELDVTVIFTTHDLLQGQKLADRIAILNR-SILQTGEPREIFKKPASRFVAEFVGARNMLR 236
Query: 242 VEARVEDGKLLISENNYIPVPKQYR---QIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
A + + + E + I + R + + +D+ + ++ D+ + + G
Sbjct: 237 GRAHITAEGISLIECDGISIYSSERATGDVSATIRPEDITVSWQRTDSSALNQLE----G 292
Query: 299 EVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFN-----FGEKVTIKLKEGSV 346
V + G Q + V + V G+ N G +V I+ K +V
Sbjct: 293 RVLAVRDAGSVQQLEVRCGGETLTVHM-TGKSLNDMGITTGSRVWIEFKASAV 344
>pir||G83358 probable ATP-binding component of ABC transporter PA2294 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948325|gb|AAG05682.1|AE004655_4 (AE004655) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 284
Score = 148 bits (371), Expect = 7e-35
Identities = 88/217 (40%), Positives = 132/217 (60%), Gaps = 9/217 (4%)
Query: 3 RIRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
RI++ ++ + G F A+ ++NLE + GEF+ LLGPSG GKSTLL +AG +P++G
Sbjct: 10 RIQIRDLSIRLGQGSEAFEAVRDLNLEARPGEFVCLLGPSGCGKSTLLGALAGHLRPSAG 69
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
+ D R V E P R G+VFQ L+P V N+AF L+++ + E + + ++
Sbjct: 70 SVRVDGRSV-EGPSPQR--GMVFQQHTLFPWRRVRDNVAFGLKMQGLARAERNRRAMEML 126
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++ + R+P QLSGG QQRV IAR LV P +LL+DEP LDA RL+++ L
Sbjct: 127 GLVGLADFAGRWPGQLSGGMQQRVEIARVLVNRPRLLLMDEPFGALDAQTRLKMQTLLLD 186
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVI--REGKIL 213
+ + T ++VTHD EAL +ADR+ V+ R G+I+
Sbjct: 187 VWARVRTTVLFVTHDIDEALYLADRVLVMSPRPGRII 223
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 148 bits (370), Expect = 9e-35
Identities = 80/222 (36%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I +EN+VKKFG+F A+ ++ ++K GE A LGP+G+GK+T ++ + + KPTSG+
Sbjct: 77 MYAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKA 136
Query: 61 YFDERDVT-ELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ DV E R IG+VFQ+ ++ +T Y+N+ + E+ EK+ ++ K
Sbjct: 137 FVAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLK 196
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+ + + D+ SGG Q+R+ IAR+L+ PEVL LDEP LD R V + ++ +
Sbjct: 197 FVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAM 256
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
++E +T TH EA +ADR+A+I G+I+ G+ +E+
Sbjct: 257 KEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEEL 298
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 147 bits (368), Expect = 2e-34
Identities = 91/236 (38%), Positives = 140/236 (58%), Gaps = 12/236 (5%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I ++N+VKKF L I+LE+K GE +A++GPSGSGK+TLL ++ + +P +G I
Sbjct: 1 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI 60
Query: 61 YFDE------RDVTELPPKDR----NIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDE 109
+ R +++ R ++G VFQN+ L+PH TV +NI P+ ++ PK+E
Sbjct: 61 TVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEE 120
Query: 110 IDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLR 169
+ R++ + + YP +LSGGQQQRVAIARAL PEV+L DEP S LD L
Sbjct: 121 ATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELV 180
Query: 170 LEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKP 225
EV +++L +E T + VTH+ + A +ADR + +G+I++ G ++ P
Sbjct: 181 GEVLNTIRQLAQEKR-TMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADP 235
>pir||C72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981699|gb|AAD36227.1|AE001772_6 (AE001772)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 325
Score = 146 bits (366), Expect = 3e-34
Identities = 92/277 (33%), Positives = 160/277 (57%), Gaps = 21/277 (7%)
Query: 6 LENIVKKFGNFI-ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDE 64
++ +++K F+ A+D +N +I +G+ + L+G SGSGK+T + + +PT G+I FD
Sbjct: 20 IDVLLRKPRKFVKAVDGVNFQIDEGKSLGLVGESGSGKTTTGRVILRLEEPTDGKIIFDG 79
Query: 65 RDVTELPPKD-----RNIGLVFQN--WALYPHMTVYKNIAFPLEL-----RKAPKDEIDE 112
RD+T+L ++ + + ++FQ+ +L P+M V K I LE+ R + K+ + E
Sbjct: 80 RDITKLSKEEMRKLRKEMQIIFQDPMASLNPYMRVGKAIEHALEIHGIGDRSSRKEMVLE 139
Query: 113 KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV 172
+R+V + E + RYP +LSGGQ+QRV IARAL+ +P +++ DE ++ LD +R ++
Sbjct: 140 MLRRV-NLEPAEDIYRRYPRELSGGQRQRVVIARALILKPRLVVADEAVAMLDVSVRSQL 198
Query: 173 RAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGG 232
L+ L+KE +T +++THD A + D IAV+ GKI+++G +++Y P + +
Sbjct: 199 LRLLQELRKEFNLTMLFITHDLATTKYVCDEIAVMYLGKIVEIGDFEDIYLNPKHPYTQA 258
Query: 233 FLGNPPMNFVEARVEDGKLLISEN---NYIPVPKQYR 266
+ P E ++ K I E N I VP R
Sbjct: 259 LISAVP----EPSLKKKKKFIPEGETPNPIDVPSGCR 291
>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
>gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
[Staphylococcus aureus]
Length = 252
Score = 146 bits (366), Expect = 3e-34
Identities = 80/237 (33%), Positives = 142/237 (59%), Gaps = 14/237 (5%)
Query: 1 MVRIRLENIVKKFGN---FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTS 57
M + ++++ K +G F AL +IN +I+ GEF+A++GPSGSGK+TLL ++ I + +S
Sbjct: 1 MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISS 60
Query: 58 GRIYFDERDVTELPPK------DRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEID 111
G + + +++ +L K ++G +FQ++++ P +TV +NI PL ++K K ++
Sbjct: 61 GSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATME 120
Query: 112 EKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLE 171
E + + L I L ++YP +LSGGQQQR A ARA V +P+++ DEP LD+ +
Sbjct: 121 ENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGALDSKSAND 180
Query: 172 VRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKI----LQVGTPDEVYYK 224
+ L+ + K T + VTHD A + A+R+ ++++G+I Q G + +Y+
Sbjct: 181 LLQRLEEMNKSFDTTIVMVTHDPV-AASFAERVIMLKDGQIHTQLYQEGRSKQAFYE 236
>pir||H71718 probable ribonucleotide transport ATP-binding protein mkl (mkl)
RP097 - Rickettsia prowazekii
>gi|3860666|emb|CAA14567.1| (AJ235270) POSSIBLE
RIBONUCLEOTIDE TRANSPORT ATP-BINDING PROTEIN MKL (mkl)
[Rickettsia prowazekii]
Length = 252
Score = 145 bits (361), Expect = 1e-33
Identities = 80/243 (32%), Positives = 137/243 (55%), Gaps = 9/243 (3%)
Query: 3 RIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
+I++ ++ K F + LD I+L++K G + +LG SGSGKS L+ ++ G+ KP G+I+
Sbjct: 8 KIKIRSLYKSFAHHKVLDGIDLDVKKGSSLVILGGSGSGKSVLIKSIVGLIKPDKGQIFI 67
Query: 63 DERDVTELPPKDR-----NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
D ++ ++ + +G +FQ AL+ + V NI F + + + K++ D K+
Sbjct: 68 DNLEIQDISNTHKFEIMKGVGFLFQGGALFDSLNVRDNITFNTK-KLSKKEKNDLAGAKL 126
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
+ ++LD YP +LSGG Q+RVA+ARA+ P +L LDEP + LD ++ + +
Sbjct: 127 NSVGLSTRILDLYPSELSGGMQKRVALARAICSTPSILFLDEPTTGLDPIMANVINELII 186
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKP---MYKFVGGFL 234
++Q+EL TTI +THD +A IA+I GKI G+ +E+ + +F+ G
Sbjct: 187 KIQEELCATTITITHDMISTEKIAKEIAMIYHGKIQWYGSKEEMRNSDNPYLTQFINGLT 246
Query: 235 GNP 237
P
Sbjct: 247 TGP 249
>emb|CAB89461.1| (AL354048) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 256
Score = 144 bits (359), Expect = 2e-33
Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 22/234 (9%)
Query: 1 MVRIRLENIVKKFGN----FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
+V R + K +G +ALD ++++ + E A++GPSGSGKSTL++ VAG+ +
Sbjct: 12 LVAARATELSKIYGQGETQVVALDRVSIDFRQAELTAIMGPSGSGKSTLMHCVAGLDTFS 71
Query: 57 SGRIYFDERDVTELPPKDRN------IGLVFQNWALYPHMTVYKNIAFPLEL--RKAPKD 108
SG + E ++ L K IG +FQ + L P +T +NI P+++ RK K
Sbjct: 72 SGSVRIGETELGSLKDKQLTKLRRDKIGFIFQAFNLLPTLTALENITLPMDIAGRKPDKQ 131
Query: 109 EIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALL 168
+D V +M+ + L P QLSGGQQQRVA+ARAL PE++ DEP NLD+
Sbjct: 132 WVDS----VIEMVGLSGRLGHRPAQLSGGQQQRVAVARALASRPEIIFGDEPTGNLDSRS 187
Query: 169 RLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
EV L+ +ELG T + VTHD A A ADR+ + +G+I+ DE+Y
Sbjct: 188 GAEVLGFLRNSVRELGQTVVMVTHDPV-AAAYADRVVFLADGRIV-----DELY 235
>dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 253
Score = 143 bits (357), Expect = 3e-33
Identities = 83/245 (33%), Positives = 142/245 (57%), Gaps = 15/245 (6%)
Query: 1 MVRIRLENIVKKFGNFI----ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
M + NI K +G + L I++ ++ GEF++++G SGSGK+TLL ++ I K +
Sbjct: 1 MAILEATNIHKSYGTKLNKQEVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVLSSIDKLS 60
Query: 57 SGRIYFDERDVTELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEI 110
+G I + ++T L K+ +++G +FQ + L +TV +NI PL + K P+
Sbjct: 61 NGSIKIEGSEMTRLKEKELAQFRKKHLGFIFQEYNLLDTLTVKENILLPLSITKIPRKAA 120
Query: 111 DEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
DEK ++VA L I ++ D+YP ++SGGQ+QR + ARA + EP ++ DEP LD+
Sbjct: 121 DEKFKQVATELGIYEIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGALDSKSAS 180
Query: 171 EVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKI-LQVGTPDE---VYYKPM 226
++ +L++L ++L T + VTHD A + R+ I++G+I Q+ DE ++K +
Sbjct: 181 DLLGKLQQLNEKLRATIVMVTHDPV-AASYCSRVIFIKDGQIYTQLHKGDESRQTFFKDI 239
Query: 227 YKFVG 231
K G
Sbjct: 240 MKTQG 244
>emb|CAC05751.1| (AL391751) putative peptide transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 356
Score = 142 bits (354), Expect = 7e-33
Identities = 84/262 (32%), Positives = 148/262 (56%), Gaps = 12/262 (4%)
Query: 11 KKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTEL 70
K+ G A+D ++ + GE + ++G SG GKST+ + + +PT+G I + D+T L
Sbjct: 28 KQVGAVKAVDGVDFRLARGETLGIVGESGCGKSTVAKMLVNLERPTAGEIRYKGEDITRL 87
Query: 71 PPKD-----RNIGLVFQN--WALYPHMTVYKNI--AFPLELRKAPKDEIDEKVRKVAKML 121
+ RNI +VFQ+ +L P MTV I A+ + APK + +V+ + ++
Sbjct: 88 SGRALKSVRRNIQMVFQDPYTSLNPRMTVGDIIGEAYDIHPEVAPKGDRRRRVQDLLDVV 147
Query: 122 HIE-KLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ + ++RYP Q SGGQ+QR+ IAR L PE+++ DEP+S LD ++ +V + RLQ
Sbjct: 148 GLNPEYINRYPHQFSGGQRQRIGIARGLALRPEIIVADEPVSALDVSVQAQVINLMARLQ 207
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
E ++ I++ HD + ++DR+ V+ G+I++ G +E+Y P + + L P+
Sbjct: 208 DEFDLSYIFIAHDLSIVRHISDRVGVMYLGRIVETGRDEEIYDHPTHPYTQALLSAVPVP 267
Query: 241 FVEARVEDGKLLISENNYIPVP 262
EAR ++++S + +P P
Sbjct: 268 DPEAREHRERIILSGD--VPSP 287
>pir||E82932 spermidine/putrescine transport ATP-binding protein UU107
[imported] - Ureaplasma urealyticum
>gi|6899063|gb|AAF30513.1|AE002111_2 (AE002111)
spermidine/putrescine transport ATP-binding protein
[Ureaplasma urealyticum]
Length = 519
Score = 141 bits (351), Expect = 2e-32
Identities = 95/254 (37%), Positives = 133/254 (51%), Gaps = 35/254 (13%)
Query: 84 WALYPHMTVY----KNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQ 139
WA YP + KNI R K+E++++ +V ++ + D YP LSGG Q
Sbjct: 252 WATYPQLKKEQFENKNIT-----RLLTKEEVEKEANRVINLVGLSARKDSYPSDLSGGMQ 306
Query: 140 QRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALA 199
QRVA+AR+LV +PE++LLDEPLS LDA +R +++ ELK+L K LGIT I VTHDQ EAL+
Sbjct: 307 QRVALARSLVIQPEIILLDEPLSALDAKVRKQLQDELKKLHKNLGITFILVTHDQEEALS 366
Query: 200 MADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVEARVEDGKLLISENNYI 259
++D++ V+ G+I QVG P ++Y P +V F+ GK I E +YI
Sbjct: 367 LSDKVVVMSNGQIEQVGKPSDIYDSPNSLWVANFI--------------GKTNIFEGHYI 412
Query: 260 PVPKQYRQIIERLNVKDVIIGF----------RPHDAEVIKGISEGIVGEVYSFEPLGRE 309
K + + DVI GF RP D +V+K I V S G
Sbjct: 413 --AKGEVEFDGITSKTDVINGFSENEACYIMIRPEDFDVVKKDEGSINARVESVLYKGLM 470
Query: 310 QIVTVSVNDSIVKV 323
+ ND I+ V
Sbjct: 471 WDIKCKYNDMIISV 484
Score = 101 bits (248), Expect = 2e-20
Identities = 47/112 (41%), Positives = 79/112 (69%), Gaps = 1/112 (0%)
Query: 4 IRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
+ L +I K + + F A++ +L+IK GEF+ LLGPSG GK+T+L +AG +PT+G+I +
Sbjct: 6 LHLRDITKIYDDGFAAVNKFDLKIKKGEFVTLLGPSGCGKTTMLKIIAGFEQPTNGKILY 65
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
+ D+ ++P + R VFQ++AL+P+MTV +NI + L+L + PKD +D+ +
Sbjct: 66 NGIDIKDMPIRLRPTSTVFQDYALFPNMTVKQNIKYGLKLMRKPKDNVDQSI 117
>gi|11498246 nitrate ABC transporter, ATP-binding protein (nrtC-2)
[Archaeoglobus fulgidus] >gi|7445947|pir||F69329 nitrate
ABC transporter, ATP-binding protein (nrtC-2) homolog -
Archaeoglobus fulgidus >gi|2649976|gb|AAB90598.1|
(AE001060) nitrate ABC transporter, ATP-binding protein
(nrtC-2) [Archaeoglobus fulgidus]
Length = 235
Score = 140 bits (349), Expect = 3e-32
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 16/216 (7%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V + +E + K +GN LD + ++ GEF+ L+G SG GK+T+L +AG+ KP GR+
Sbjct: 5 VALIVEGLKKSYGNLRVLDGVTFSVEKGEFVCLIGESGCGKTTILKIIAGLEKPDGGRVE 64
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
F +G VFQ+ L P TVY NI F L +A E VR++ +
Sbjct: 65 F---------AGGARMGFVFQDDRLLPWKTVYGNILFAL---RASGIEDGGVVREIIDAV 112
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
+ + YP QLSGG +QRV IARAL P++LL+DEP ++LDA R ++ EL R+ +
Sbjct: 113 GLRGFENYYPKQLSGGMRQRVGIARALAVNPDLLLMDEPFASLDARTRERMQEELLRIVE 172
Query: 182 ELGITTIYVTHDQAEALAMADRIAVI--REGKILQV 215
G T ++VTH EA+ +ADR+ V+ R ++L++
Sbjct: 173 --GKTVVFVTHSIDEAVYLADRVVVLSPRPSRVLRI 206
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 139 bits (348), Expect = 3e-32
Identities = 78/224 (34%), Positives = 125/224 (54%), Gaps = 1/224 (0%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V I+ N+ K+FG F+A+D+IN E+ +GE LGP+G+GKST + + + KP+ G
Sbjct: 10 VAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTAT 69
Query: 62 FDERDVTELPPKDR-NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
DV + P R +IG+V Q + +T ++N+ L PK +E+ +++ +M
Sbjct: 70 VSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEM 129
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ + R SGG ++R+ IA +L+ P +L LDEP LDA R + + +L+
Sbjct: 130 VELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLK 189
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYK 224
+E +T TH EA DRIA+I +GKIL +G+P E+ K
Sbjct: 190 EEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEK 233
>pir||F64204 spermidine/putrescine transport ATP-binding protein potA homolog -
Mycoplasma genitalium
Length = 486
Score = 139 bits (348), Expect = 3e-32
Identities = 77/175 (44%), Positives = 118/175 (67%), Gaps = 9/175 (5%)
Query: 103 RKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLS 162
RK K E ++KV V +M+ ++ DR P +LSGG +QRVA+AR+LV EPE+LLLDEPLS
Sbjct: 244 RKLTKAEQNKKVSDVIEMVGLKGKEDRLPDELSGGMKQRVALARSLVVEPEILLLDEPLS 303
Query: 163 NLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
LDA +R ++ EL+++ K+ G+T I VTHDQ EAL ++DRI V+ EG ILQVG P ++Y
Sbjct: 304 ALDAKVRKNLQKELQQIHKKSGLTFILVTHDQEEALVLSDRIVVMNEGNILQVGNPVDIY 363
Query: 223 YKPMYKFVGGFLGNPP------MNFVEARVEDGKLLIS--ENNYIPVPKQYRQII 269
P +++ F+G + + +++ G+++ + +NNY+ V KQY+ +I
Sbjct: 364 DSPKTEWIANFIGQANIFKGTYLGEKKIQLQSGEIIQTDVDNNYV-VGKQYKILI 417
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 139 bits (348), Expect = 3e-32
Identities = 78/224 (34%), Positives = 125/224 (54%), Gaps = 1/224 (0%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V I+ N+ K+FG F+A+D+IN E+ +GE LGP+G+GKST + + + KP+ G
Sbjct: 10 VAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTAT 69
Query: 62 FDERDVTELPPKDR-NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKM 120
DV + P R +IG+V Q + +T ++N+ L PK +E+ +++ +M
Sbjct: 70 VSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEM 129
Query: 121 LHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ + R SGG ++R+ IA +L+ P +L LDEP LDA R + + +L+
Sbjct: 130 VELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLK 189
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYK 224
+E +T TH EA DRIA+I +GKIL +G+P E+ K
Sbjct: 190 EEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEK 233
>sp|P47288|POTA_MYCGE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA HOMOLOG
>gi|3844651|gb|AAC71258.1| (U39684)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Mycoplasma genitalium]
Length = 559
Score = 139 bits (348), Expect = 3e-32
Identities = 77/175 (44%), Positives = 118/175 (67%), Gaps = 9/175 (5%)
Query: 103 RKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLS 162
RK K E ++KV V +M+ ++ DR P +LSGG +QRVA+AR+LV EPE+LLLDEPLS
Sbjct: 317 RKLTKAEQNKKVSDVIEMVGLKGKEDRLPDELSGGMKQRVALARSLVVEPEILLLDEPLS 376
Query: 163 NLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
LDA +R ++ EL+++ K+ G+T I VTHDQ EAL ++DRI V+ EG ILQVG P ++Y
Sbjct: 377 ALDAKVRKNLQKELQQIHKKSGLTFILVTHDQEEALVLSDRIVVMNEGNILQVGNPVDIY 436
Query: 223 YKPMYKFVGGFLGNPP------MNFVEARVEDGKLLIS--ENNYIPVPKQYRQII 269
P +++ F+G + + +++ G+++ + +NNY+ V KQY+ +I
Sbjct: 437 DSPKTEWIANFIGQANIFKGTYLGEKKIQLQSGEIIQTDVDNNYV-VGKQYKILI 490
Score = 100 bits (247), Expect = 2e-20
Identities = 64/185 (34%), Positives = 104/185 (55%), Gaps = 6/185 (3%)
Query: 4 IRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
I +E + K F + ++++ +I+L IK GEF+ +LGPSG GK+TLL +AG PT G+I
Sbjct: 7 IEIEGLNKTFDDGYVSIRDISLNIKKGEFITILGPSGCGKTTLLRLLAGFEDPTYGKIKV 66
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
+ D+ ++ R VFQ++AL+ H+TVYKNIA+ L++ DEI + V K L
Sbjct: 67 NGIDIKDMAIHKRPFATVFQDYALFSHLTVYKNIAYGLKVMWTKLDEIPKLVSDYQKQLA 126
Query: 123 IEKL-LDRYPWQLSGGQQQRVAIARALVKEPEVLLLDE----PLSNLDALLRLEVRAELK 177
++ L L+R QL I + K ++L +++ N + L R ++ L+
Sbjct: 127 LKHLKLERKIEQLQKNNSNAQRIKKLKEKLQKLLEINKQKVIEFENKEKLRREDIYKNLE 186
Query: 178 RLQKE 182
+L KE
Sbjct: 187 QLTKE 191
>pir||B82393 ABC transporter, ATP-binding protein VCA0977 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658417|gb|AAF96873.1| (AE004424) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 539
Score = 139 bits (348), Expect = 3e-32
Identities = 80/224 (35%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
Query: 16 FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDR 75
F A+ I+LE+K GE + ++G SGSGKSTL + G+ P++G+I F +D L K R
Sbjct: 300 FEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLL-PSTGQIAFKGQDFRALSEKQR 358
Query: 76 -----NIGLVFQN--WALYPHMTVYKNIAFPLELRKAPKDEID--EKVRKVAKMLHIE-K 125
+I +VFQ+ +L P MTV + I L + + +++ ++ R+ + + ++
Sbjct: 359 LALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPN 418
Query: 126 LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
++RYP + SGGQ+QR+AIARAL+ EP +LLDEP S LD ++L V LK +QK I
Sbjct: 419 SINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNI 478
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKF 229
++++HD A A++DR+ V+++G++++ G+ + +++ P +++
Sbjct: 479 GYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEY 522
Score = 121 bits (301), Expect = 1e-26
Identities = 98/359 (27%), Positives = 177/359 (49%), Gaps = 41/359 (11%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKST-------LLYTVAGIYKPTS----GRIYFDERD 66
A+ N++ +I+ GE +A++G SGSGKS LL A I+ +S G ++ D
Sbjct: 25 AVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARIHPESSIMFEGEELLNKTD 84
Query: 67 VTELPPKDRNIGLVFQN--WALYPHMTVYKNIAFPLEL-RKAPKDEIDEKVRKVAKMLHI 123
+ IG++FQ +L P+M V +A + R +++ ++V ++ +++H+
Sbjct: 85 TQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNVSQNQAKQRVLELFQLVHL 144
Query: 124 ---EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQ 180
+ ++P + SGGQ QR+ IA AL+ EP++L+ DEP + LD ++ EV +K +Q
Sbjct: 145 PDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLRLIKEIQ 204
Query: 181 KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMN 240
+G+ +++THD +ADR+ V+ +G +++ G+ ++++ +P + + + + P
Sbjct: 205 ANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQLFLQPEHDYTRMLINSIPKG 264
Query: 241 FVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGIS------- 293
+ D L+ + I + VK I R E +KGIS
Sbjct: 265 SKDPVAVDAAPLLKAED----------IRVKFLVKPYFISRRNQYFEAVKGISLELKQGE 314
Query: 294 -EGIVGEVYSFE-PLGREQIVTVSVNDSIVKVFAPEGEHFN-FGEKVTIKLKEGSVVLF 349
GIVGE S + LGR I + I A +G+ F EK + LK+ ++F
Sbjct: 315 TLGIVGESGSGKSTLGRALIGLLPSTGQI----AFKGQDFRALSEKQRLALKKDIQMVF 369
>pir||D83281 histidine transport protein HisP PA2926 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949020|gb|AAG06314.1|AE004718_11 (AE004718)
histidine transport protein HisP [Pseudomonas
aeruginosa]
Length = 255
Score = 139 bits (348), Expect = 3e-32
Identities = 88/251 (35%), Positives = 145/251 (57%), Gaps = 18/251 (7%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +++E+I K++G+ L ++L G+ ++++G SGSGKST L V + KP +G I
Sbjct: 1 MYSLQVEDIHKRYGSHEVLRGVSLRAGKGDVISIIGSSGSGKSTFLRCVNFLEKPCAGHI 60
Query: 61 YFDERDVTELP----------PKD-----RNIGLVFQNWALYPHMTVYKNIA-FPLELRK 104
+ ++ P P+ + +VFQ++ L+ H+TV +N+ P+ + +
Sbjct: 61 RVGDEELRTRPGALGELRAADPRQLQRIRSRLAMVFQHFNLWSHLTVLENVVECPVNVLR 120
Query: 105 APKDEIDEKVRK-VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSN 163
+D+ + R +AK+ EK+ +YP +LSGGQQQRVAIARAL EP+V+L DEP S
Sbjct: 121 MNRDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVAIARALAMEPQVMLFDEPTSA 180
Query: 164 LDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY 223
LD L EV +++L +E G T + VTH+ A A ++ + + +G I + GTPD+V+
Sbjct: 181 LDPELVGEVLKVMQQLAEE-GRTMVLVTHEMAFARQVSSHVIFLHQGVIEEEGTPDQVFG 239
Query: 224 KPMYKFVGGFL 234
P + + FL
Sbjct: 240 APRSERLRQFL 250
>pir||G83214 probable ATP-binding component of ABC transporter PA3442 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949583|gb|AAG06830.1|AE004765_3 (AE004765) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 274
Score = 139 bits (347), Expect = 5e-32
Identities = 79/211 (37%), Positives = 127/211 (59%), Gaps = 9/211 (4%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
+ + L + ++FG L +I+L + G+F+A++G SG GKSTLL +AG+ +P+ G +
Sbjct: 19 IPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSRGELL 78
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
+ E R L+FQ+ L P V N+ L + + K + + +
Sbjct: 79 AGSAALAEAREDTR---LMFQDSRLLPWKRVIDNVGLGL------RGDWRAKALQALRAV 129
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
+ + + +P LSGGQ+QRVA+ARAL+ EP +LLLDEPL LDAL R+E++ ++ L +
Sbjct: 130 GLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGLWR 189
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKI 212
E G T + VTHD +EA+A+ADR+ +I +G+I
Sbjct: 190 EHGFTVLLVTHDVSEAVAVADRVILIEDGEI 220
>gb|AAK42946.1| ABC transporter, ATP binding protein (branched chain amino acid)
[Sulfolobus solfataricus]
Length = 248
Score = 139 bits (346), Expect = 6e-32
Identities = 85/255 (33%), Positives = 151/255 (58%), Gaps = 27/255 (10%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++L+++ K FG ALD++ LEI++ +F L+GP+GSGKSTL+ V GIYKP SG I
Sbjct: 1 MSLLKLDSVSKYFGGIKALDSVTLEIENSKFTLLIGPNGSGKSTLINVVTGIYKPDSGSI 60
Query: 61 YFDERDVTELPPKD-RNIGLV--FQNWALYPHMTVYKNIAF----------------PLE 101
+ ++R++T P + +G+V FQN ++P+++V N+ P+
Sbjct: 61 FLEDRNITGKKPHELYKLGIVRTFQNPQIFPNLSVLDNVILGISPIKGESILRSLFKPIW 120
Query: 102 LRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPL 161
LR+ ++E+ EK + K++ +++L DR +LSGGQ + + IAR+L+ P +L++DEPL
Sbjct: 121 LRE--EEELAEKAYNILKIVKLDRLWDRPARELSGGQLKLLEIARSLMTRPRLLVMDEPL 178
Query: 162 SNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALA-MADRIAVIREGKILQVGTPDE 220
+ ++ L E+ L L++++G I+V + + +A AD + + GK++ G+ ++
Sbjct: 179 AGVNPQLAKEILNILTDLKRDIG---IFVVEHRLDIVANYADYVYAMFMGKVIAKGSVND 235
Query: 221 VYYKPMYKFVGGFLG 235
V P V +LG
Sbjct: 236 VLNNP--TVVDAYLG 248
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 138 bits (345), Expect = 8e-32
Identities = 89/246 (36%), Positives = 137/246 (55%), Gaps = 14/246 (5%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +++ NI K F L I+ EI GE +A+LGPSGSGK+T L + + +P G +
Sbjct: 1 MSMLKVSNIQKNFNGNHVLKGIDFEINKGEVVAILGPSGSGKTTFLRCLNLLERPEQGIL 60
Query: 61 YFDERDVT-----------ELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLEL-RKAPKD 108
F + + EL + R+ +VFQ + L+PH + +N+ + + +K K
Sbjct: 61 EFTDGSLKIDFSQKISKADELKLRRRS-SMVFQQYNLFPHRSALENVMEGMVVVQKQDKA 119
Query: 109 EIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALL 168
+ EK + + + ++ D +P QLSGGQQQRV IARAL +P+++LLDEP S LD L
Sbjct: 120 QAREKALSLLEKVGLKNKADLFPSQLSGGQQQRVGIARALAVKPDIILLDEPTSALDPEL 179
Query: 169 RLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYK 228
EV LK L +E G T I VTH+ A +ADR+ ++ +G I++ T D+ + P ++
Sbjct: 180 VGEVLQTLKMLAQE-GWTMIIVTHEMQFAKDVADRVILMADGHIVEQNTADKFFTCPQHE 238
Query: 229 FVGGFL 234
FL
Sbjct: 239 RTKQFL 244
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 138 bits (343), Expect = 1e-31
Identities = 82/222 (36%), Positives = 128/222 (56%), Gaps = 9/222 (4%)
Query: 1 MVRIRLENIVKKF--GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG 58
M I + ++ K F G AL+ +NLE+ GEF++++GPSGSGKSTLL + + P SG
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPDSG 60
Query: 59 RIYFDERDVTELPPKDR----NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKV 114
I RD++ R IG VFQ L P++T +N+ P+ K + ++E+
Sbjct: 61 TICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEIPMFAVK--HENMEERA 118
Query: 115 RKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRA 174
++ + + + R P +LSGG++QRVAIARAL +P ++L DEP +LD+ V
Sbjct: 119 MELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTSQRVLR 178
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVG 216
+L+ LQ++ G+T + VTH + + AMA R I +G I+ G
Sbjct: 179 KLRELQEDEGVTLVVVTH-EPDVAAMASRTIRILDGVIVDDG 219
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 136 bits (340), Expect = 3e-31
Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 6/238 (2%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
V + + + K + N + LD IN + GE +LGPSG GKST L + G+ K G I
Sbjct: 3 VILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKINEGEIL 62
Query: 62 FDERDV----TELPPKDRNIGLVFQNWALYPHMTVYKNIAF-PLELRKAPKDEIDEKVRK 116
F+ ++ T + IG+VFQN+ L+PH+ V NI P++++K KDE+ + +
Sbjct: 63 FENTNLNNKATNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPMKVQKRSKDEVISQAIE 122
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ K + +E YP +LSGGQ+QRVAI R+L P+++L DE ++LD + EV +
Sbjct: 123 LLKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVLEVI 182
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFL 234
L G++ + VTH+ A +A +I GKI + E + P + FL
Sbjct: 183 LEL-ATTGMSMVIVTHEMKFAQKIAHKIVFFDSGKIAEENNAKEFFNHPKSQRAQKFL 239
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 136 bits (340), Expect = 3e-31
Identities = 74/240 (30%), Positives = 137/240 (56%), Gaps = 7/240 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + E++ K + N + +++L +K GE + LLGP+G+GK+T Y V G+ + G+I
Sbjct: 1 MPTLYAEHLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQGKI 60
Query: 61 YFDERDVTELPPKDR---NIGLVFQNWALYPHMTVYKNIAFPLELRK-APKDEIDEKVRK 116
D++D++ LP DR IG + Q +++ ++VY N+ L++RK + ++ +
Sbjct: 61 RIDDQDISVLPMHDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKDRAEE 120
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ HIE + D LSGG+++RV IARAL P+ +LLDEP + +D + ++++ +
Sbjct: 121 LISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKII 180
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGN 236
L K+ G+ + H+ E L + R ++ G+++ GTP+++ P K V +LG+
Sbjct: 181 VHL-KQRGLGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQILNNPDVKRV--YLGD 237
>pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC - Bacillus
subtilis >gi|2293177|gb|AAC00255.1| (AF008220)
transporter [Bacillus subtilis]
>gi|2635522|emb|CAB15016.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 253
Score = 136 bits (339), Expect = 4e-31
Identities = 76/222 (34%), Positives = 129/222 (57%), Gaps = 11/222 (4%)
Query: 1 MVRIRLENIVKKFGNFI----ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
MV + I K +GN + L I++ I+ GEF++++G SGSGK+TLL ++ I + +
Sbjct: 1 MVILEANKIRKSYGNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVLSSIDQVS 60
Query: 57 SGRIYFDERDVTELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEI 110
G I+ + D+T + K +++G +FQ++ L +TV +NI PL + K K E
Sbjct: 61 HGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENILLPLSITKLSKKEA 120
Query: 111 DEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
+ K +VAK L I +L D+YP ++SGGQ+QR + RA + +P ++ DEP LD+
Sbjct: 121 NRKFEEVAKELGIYELRDKYPNEISGGQKQRTSAGRAFIHDPSIIFADEPTGALDSKSAS 180
Query: 171 EVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKI 212
++ +L +L ++ T I VTHD A + R+ I++G++
Sbjct: 181 DLLNKLSQLNQKRNATIIMVTHDPV-AASYCGRVIFIKDGQM 221
>sp|P97027|SSUB_BACSU PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP-BINDING PROTEIN SSUB
>gi|7445768|pir||G69816 nitrate ABC transporter (binding
protein) homolog ygaL - Bacillus subtilis
>gi|1903038|emb|CAB07520.1| (Z93102) hypothetical 30.6
kd protein [Bacillus subtilis]
>gi|2633206|emb|CAB12711.1| (Z99108) similar to nitrate
ABC transporter (binding protein) [Bacillus subtilis]
Length = 274
Score = 135 bits (337), Expect = 7e-31
Identities = 84/213 (39%), Positives = 126/213 (58%), Gaps = 8/213 (3%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
+ I+ + V++ L+NI L I GEF+ L+GPSG GKSTLL +AG+ G +
Sbjct: 24 ISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVE 83
Query: 62 FDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKML 121
+ R VT + G +FQ L+P +TV +NIA L L K PK + +KV ++ +++
Sbjct: 84 INGRSVTAPGIQQ---GFIFQEHRLFPWLTVEQNIAADLNL-KDPK--VKQKVDELIEIV 137
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
++ YP +LSGG QRVAI RAL++EPEVLLLDEP LDA R ++ L + +
Sbjct: 138 RLKGSEKAYPRELSGGMSQRVAITRALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWR 197
Query: 182 ELGITTIYVTHDQAEALAMADRIAVI--REGKI 212
+ T I VTHD E++ + + +A++ + GKI
Sbjct: 198 KKKTTMILVTHDIDESVYLGNELAILKAKPGKI 230
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 134 bits (334), Expect = 2e-30
Identities = 74/222 (33%), Positives = 127/222 (56%), Gaps = 6/222 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M +I +EN+ K F F ALD I+L ++ GE LGP+G+GK+T + G+ KPTSG +
Sbjct: 1 MAQIEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSV 60
Query: 61 YFDERDVTELPPKDRNI-GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
DV E P + + I G + +N+ YP++T +N+ + E PKD +DE +
Sbjct: 61 RIAGMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVDE----LLA 116
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ ++ D+ + S G +QR+A+A+AL+ +PEV+ LDEP + LD + R ++ L
Sbjct: 117 LVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIREL 176
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
++ G T + +H +E + + +I G+I++VG E+
Sbjct: 177 NQK-GKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISEL 217
>sp|P75059|POTA_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA HOMOLOG
>gi|2146654|pir||S73425 spermidine/putrescine transport
ATP-binding protein potA - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|1673754|gb|AAB95747.1| (AE000011)
spermidine/putrescine transport ATP-binding prot
[Mycoplasma pneumoniae]
Length = 560
Score = 133 bits (331), Expect = 3e-30
Identities = 74/195 (37%), Positives = 124/195 (62%), Gaps = 21/195 (10%)
Query: 103 RKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLS 162
RK K E +KV V +++ ++ D+ P +LSGG +QRVA+AR+LV EP++LLLDEPLS
Sbjct: 318 RKLTKQEQHQKVCAVIELVGLKGNEDKLPEELSGGMKQRVALARSLVIEPDILLLDEPLS 377
Query: 163 NLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
LDA +R ++ EL+++ ++ G+T I VTHDQ EAL +++RI V+ EG ILQVG+P ++Y
Sbjct: 378 ALDAKVRKNLQKELQKIHQQSGLTFILVTHDQEEALVLSNRIVVMNEGNILQVGSPADIY 437
Query: 223 YKPMYKFVGGFLGNPP------MNFVEARVEDGKLLIS--ENNYIPVPKQYRQIIERLNV 274
P +++ F+G + ++ ++ G+++ + +NNY+ V K+Y+ +I
Sbjct: 438 DSPKTEWIANFIGQANIFKGTYLGDLKIKLHSGEVIKTDVDNNYV-VGKEYKILI----- 491
Query: 275 KDVIIGFRPHDAEVI 289
RP D +++
Sbjct: 492 -------RPEDFDIV 499
Score = 97.5 bits (239), Expect = 2e-19
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Query: 4 IRLENIVKKFGN-FIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYF 62
I +E + K F + F+++ +INL+IK GEF+ +LGPSG GK+T L +AG PT G+I
Sbjct: 7 IEIEGLNKTFDDGFVSVRDINLKIKKGEFITILGPSGCGKTTTLRLLAGFEDPTYGKIKV 66
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK-----V 117
+ D+ +LP R VFQ++AL+ H+TVYKNIA+ L+ D ID+ V + +
Sbjct: 67 NGLDIKDLPIHKRPFATVFQDYALFSHLTVYKNIAYGLKAMYTKLDPIDKLVEQYHQSLL 126
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
K + K ++R + Q +V++ + E + R ++ L
Sbjct: 127 DKQHRLHKRIERLEKSNANPQLLEQLKQTVVVQQKQFKQQTETFKQKENARRDAIQQRLV 186
Query: 178 RLQKE 182
+L KE
Sbjct: 187 QLTKE 191
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 132 bits (328), Expect = 8e-30
Identities = 68/225 (30%), Positives = 130/225 (57%), Gaps = 5/225 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + +N+ K + +++++L + GE + LLGP+G+GK+T Y V GI +G I
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI 60
Query: 61 YFDERDVTELP---PKDRNIGLVFQNWALYPHMTVYKNIAFPLELR-KAPKDEIDEKVRK 116
D+ D++ LP R IG + Q +++ ++VY N+ L++R ++ +++ +
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ + HIE L D LSGG+++RV IARAL P+ +LLDEP + +D + ++++ +
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII 180
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
+ L ++ G+ + H+ E LA+ +R ++ +G ++ GTP E+
Sbjct: 181 EHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 131 bits (327), Expect = 1e-29
Identities = 68/225 (30%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M + +N+ K + +++++L + GE + LLGP+G+GK+T Y V GI G I
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNI 60
Query: 61 YFDERDVTELP---PKDRNIGLVFQNWALYPHMTVYKNIAFPLELR-KAPKDEIDEKVRK 116
D+ D++ LP R IG + Q +++ ++VY N+ L++R ++ +++ +
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ + HIE L D LSGG+++RV IARAL P+ +LLDEP + +D + ++++ +
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII 180
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
+ L ++ G+ + H+ E LA+ +R ++ +G ++ GTP E+
Sbjct: 181 EHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>pir||S74565 ABC-type transport protein slr0251 - Synechocystis sp. (strain PCC
6803) >gi|1651790|dbj|BAA16717.1| (D90900) ABC
transporter [Synechocystis sp.]
Length = 252
Score = 130 bits (324), Expect = 2e-29
Identities = 72/234 (30%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
+V + LENI K +G ++ +N ++ GE + LLGP+G+GK+T Y G+ KP +GR+
Sbjct: 10 IVTLVLENIHKLYGKRCVVNRVNAQVAPGEIVGLLGPNGAGKTTTFYIATGLVKPNTGRV 69
Query: 61 YFDERDVTELPPKDR---NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
+ +RD+T LP R +G + Q +++ ++V NI LE ++ ++
Sbjct: 70 WLHQRDITNLPLNQRAHLGLGYLTQQASVFRQLSVRDNILLALEQTGVSPPLRKHRLEQL 129
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARAL---VKEPEVLLLDEPLSNLDALLRLEVRA 174
+EK+ Q+SGG+++R +ARAL V+ P+ LLLDEP + +D + E++
Sbjct: 130 LAEFRLEKVAHTQGSQISGGERRRTELARALAIGVEGPQFLLLDEPFAGVDPIAVAEIQT 189
Query: 175 ELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYK 228
+ +L +E + + H+ E LA+ +R ++R+G+IL G+ E+ P+ +
Sbjct: 190 IIAQL-RERNMGILITDHNVRETLAITNRGYIMRDGQILASGSAGELSENPLVR 242
>gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-binding protein
[Escherichia coli]
Length = 318
Score = 130 bits (323), Expect = 3e-29
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
+ R+R E + +G + +N+ +EI DG F A++GP+G GKSTLL T++ + P G +
Sbjct: 52 VARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHV 111
Query: 61 YFDERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAF------PLELRKAPKDEIDE 112
+ D + K+ R IGL+ QN +TV + +A PL R +DE E
Sbjct: 112 WLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDE--E 169
Query: 113 KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV 172
V K + I L D+ LSGGQ+QR IA L +E ++LLDEP + LD ++++
Sbjct: 170 AVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDL 229
Query: 173 RAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
L L +E G T V HD +A A + +REGKI+ G P E+
Sbjct: 230 LELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 278
>sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING PROTEIN FEPC
>gi|7442510|pir||B64792 ferric enterobactin ABC-type
transport system ATP-binding protein fepC [validated] -
Escherichia coli >gi|1786803|gb|AAC73689.1| (AE000164)
ATP-binding component of ferric enterobactin transport
[Escherichia coli K12]
Length = 271
Score = 130 bits (323), Expect = 3e-29
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
+ R+R E + +G + +N+ +EI DG F A++GP+G GKSTLL T++ + P G +
Sbjct: 5 VARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHV 64
Query: 61 YFDERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAF------PLELRKAPKDEIDE 112
+ D + K+ R IGL+ QN +TV + +A PL R +DE E
Sbjct: 65 WLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDE--E 122
Query: 113 KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV 172
V K + I L D+ LSGGQ+QR IA L +E ++LLDEP + LD ++++
Sbjct: 123 AVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDL 182
Query: 173 RAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
L L +E G T V HD +A A + +REGKI+ G P E+
Sbjct: 183 LELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231
>sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PROTEIN AOTP
>gi|11277315|pir||T44458 histidine/ornithine transport
protein aotP [imported] - Pseudomonas aeruginosa
>gi|11347446|pir||A83535 arginine/ornithine transport
protein AotP PA0892 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|2668599|gb|AAC71074.1| (AF012537)
ATPase [Pseudomonas aeruginosa]
>gi|9946792|gb|AAG04281.1|AE004523_9 (AE004523)
arginine/ornithine transport protein AotP [Pseudomonas
aeruginosa]
Length = 254
Score = 130 bits (323), Expect = 3e-29
Identities = 80/250 (32%), Positives = 135/250 (54%), Gaps = 17/250 (6%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++ ++++ K++G+ L ++L K G+ ++++G SGSGKST L + + +P +G+I
Sbjct: 1 MYKLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKI 60
Query: 61 YFDERDVTELPPKD---------------RNIGLVFQNWALYPHMTVYKN-IAFPLELRK 104
+ ++ +P +D + +VFQ++ L+ HM+ +N I P+ +
Sbjct: 61 LLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQHFNLWSHMSALENVIEAPVHVLG 120
Query: 105 APKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNL 164
K E EK + + D YP +SGG+QQRVAIARAL EPEV+L DEP S L
Sbjct: 121 VSKKEAIEKAEHYLAKVGVAHRKDAYPAHMSGGEQQRVAIARALAVEPEVMLFDEPTSAL 180
Query: 165 DALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYK 224
D L EV ++ L +E G T + VTH+ A +++++ + +G + + G P EV
Sbjct: 181 DPELVGEVLKVMQDLAQE-GRTMVVVTHEMGFAREVSNQLVFLHKGLVEEHGCPKEVLAN 239
Query: 225 PMYKFVGGFL 234
P + FL
Sbjct: 240 PQSDRLKQFL 249
>pir||S16298 ferric enterobactin transport protein fepC - Escherichia coli
>gi|41432|emb|CAA40709.1| (X57471) fepC [Escherichia
coli]
Length = 271
Score = 129 bits (322), Expect = 4e-29
Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
+ R+R E + +G + +N+ +EI DG F A++GP+G GKSTLL T++ + P G +
Sbjct: 5 VARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHV 64
Query: 61 YFDERDVTELPPKD--RNIGLVFQNWALYPHMTVYKNIAF------PLELRKAPKDEIDE 112
+ D + K+ R IGL+ QN +TV + +A PL R +DE E
Sbjct: 65 WLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDE--E 122
Query: 113 KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV 172
V K + I L D+ LSGGQ+QR IA L +E ++LLDEP + LD ++++
Sbjct: 123 AVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDL 182
Query: 173 RAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
L L +E G T V HD +A A + +REGKI+ G P E+
Sbjct: 183 LELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGRPKEI 231
>pir||C72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980563|gb|AAD35169.1|AE001694_5 (AE001694)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 320
Score = 129 bits (322), Expect = 4e-29
Identities = 80/256 (31%), Positives = 135/256 (52%), Gaps = 33/256 (12%)
Query: 1 MVRIRLENIVKKFG--------NFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGI 52
M + ++N+ K F +A+DN+N +I + E L G SG GK+T + G
Sbjct: 1 MPLLEIKNLTKIFTIGSIFSRTRIVAVDNVNFDINEAEIFTLAGESGCGKTTTAKIILGF 60
Query: 53 YKPTSGRIYFDERDVTELPPKDRN-------IGLVFQNWALYPHMTV---------YKNI 96
+PTSG I + R + + ++ I VFQN P T +
Sbjct: 61 EEPTSGEIIYKGRKIDRVHQNEKERRELLKEIQAVFQN----PFSTFNPLRKVDRYFYET 116
Query: 97 AFPL---ELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPE 153
F L + +K ++ I EK+ V + E+ ++YP + SGGQ QR++IARAL+ P
Sbjct: 117 LFNLGIADTKKKAEEIIKEKLSAVG--ISFEEFSEKYPSEFSGGQLQRISIARALLTNPS 174
Query: 154 VLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKIL 213
+L+ DEP+S +DA LR+ + K L+++ G++ +Y+THD A ++DRIAV+ G I+
Sbjct: 175 LLVADEPVSMVDASLRMSIVNLFKDLKEQYGVSVLYITHDLTTAYYVSDRIAVMFRGNIV 234
Query: 214 QVGTPDEVYYKPMYKF 229
++G ++V +P + +
Sbjct: 235 ELGPAEKVLMEPKHPY 250
>gb|AAG35385.1| (AF030414) ModC [Gluconacetobacter diazotrophicus]
Length = 254
Score = 129 bits (322), Expect = 4e-29
Identities = 80/223 (35%), Positives = 126/223 (55%), Gaps = 17/223 (7%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
++R+ + FG ALD + AL GPSG GKST+L +AG+ +P +G
Sbjct: 6 LLRVAFQGRAGTFGYDFALDAPAQGVT-----ALFGPSGCGKSTILRCIAGLDRPAAGYC 60
Query: 61 YFDE---RDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPL---ELRKAPKDEIDEK 113
+ +D P R IG VFQ +L+PH++V N+ + LR+ P D D
Sbjct: 61 ALGDTVWQDAKRFVPAWRRPIGYVFQEPSLFPHLSVRGNLLYGAGVRSLRRLPPDLAD-- 118
Query: 114 VRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVR 173
+ ML +E LL+R LSGG++QRVAI RAL++ P +LL+DEPLS LD+ + E+
Sbjct: 119 ---IIAMLELETLLERGVAHLSGGERQRVAIGRALLRRPALLLMDEPLSALDSARKNEIL 175
Query: 174 AELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVG 216
L+ L +++ I +YV+HD E ++AD + ++ G++++ G
Sbjct: 176 PFLQMLHRQIRIPILYVSHDIGEIASLADHVVLLAPGRVVESG 218
>gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dppD-3) [Sulfolobus
solfataricus]
Length = 324
Score = 129 bits (320), Expect = 7e-29
Identities = 82/262 (31%), Positives = 147/262 (55%), Gaps = 24/262 (9%)
Query: 1 MVRIRLENIVKKFGNFIA----LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
MV +++ N+ + I+ L ++NL+++ GE + ++G SGSGKSTL + ++ I P
Sbjct: 4 MVVLQIRNLNVYYNTLISWVKVLSDVNLDVEKGEIVGVVGESGSGKSTLGHAISRILPPN 63
Query: 57 S---GRIYFDERDVTELPPKDRN------IGLVFQNW--ALYPHMTVYKNIAFPLELR-- 103
+ G I D ++ +L + + ++FQN +L P V + +++R
Sbjct: 64 ARIQGDIIVDGVNLAKLKDSELQKYRGTWVFMIFQNPLNSLNPVKKVGSQLLEAVKIRYQ 123
Query: 104 ----KAPKDEIDEKVRKVAKMLHIE---KLLDRYPWQLSGGQQQRVAIARALVKEPEVLL 156
KA ++ + V +V K L + ++DRYP QLSGGQ QR+ I+ AL+ +P++L+
Sbjct: 124 REGKKAEEESLMRDVIEVLKDLRLPDPYSIIDRYPHQLSGGQVQRIVISMALLLKPKLLI 183
Query: 157 LDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVG 216
DEP S LD ++ +V K+L KE+ + +++THD + A ++DRI V+ G+I++ G
Sbjct: 184 ADEPTSALDVTIQAQVVNLFKQLNKEINTSILFITHDISLAYVVSDRIVVMYAGRIMEDG 243
Query: 217 TPDEVYYKPMYKFVGGFLGNPP 238
+EV PM+ + G + + P
Sbjct: 244 KVEEVLKSPMHPYTQGLVASIP 265
>gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter ATPase subunit [uncultured
proteobacterium EBAC31A08]
Length = 532
Score = 127 bits (317), Expect = 2e-28
Identities = 82/227 (36%), Positives = 131/227 (57%), Gaps = 11/227 (4%)
Query: 8 NIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDV 67
N KK F A+ N + I + L+G SGSGKSTL +A + G I F+ RD+
Sbjct: 290 NFFKK-NTFHAVKNTSFSIYKNTTIGLVGESGSGKSTLGKAIANLVS-YKGNIKFEGRDI 347
Query: 68 TELPPKD-----RNIGLVFQN--WALYPHMTVYKNIAFPLELR-KAPKDEIDEKVRKVAK 119
K+ +N+ +VFQ+ +L P MTV + + L + K K E DE++ KV
Sbjct: 348 NSNSQKENKELKKNVQIVFQDPYGSLSPRMTVGEIVGEGLGVHFKLTKKERDERIDKVLS 407
Query: 120 MLHIEKLL-DRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
+ IE + ++YP + SGGQ+QR+AIAR+L+ P ++LDEP S LD ++++V LK
Sbjct: 408 DVGIEIVAKNKYPHEFSGGQRQRIAIARSLIMNPAFMILDEPTSALDRSIQIQVIDLLKE 467
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKP 225
+Q E G+T ++++HD +M+D I V++ G+I++ G +V+ P
Sbjct: 468 IQNEYGLTYLFISHDLKVIRSMSDFIFVMKNGEIVESGPSHKVFESP 514
Score = 124 bits (308), Expect = 2e-27
Identities = 91/312 (29%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 8 NIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKS-TLLYTVAGIYKPTSG-----RIY 61
N + G F A+DNI+ +I+ + +AL+G SGSGKS T + + + KP + I
Sbjct: 13 NFSTRDGLFNAVDNISFDIEKNQTLALVGESGSGKSVTAMSILQLLQKPQASYSKESSIK 72
Query: 62 FDERDVTE------LPPKDRNIGLVFQN--WALYPHMTVYKNI--AFPLELRKAPKDEID 111
F+ ++ L + I ++FQ +L P+ V I + L + + KD ID
Sbjct: 73 FNGDEIINAKYEKLLSLRGNIISMIFQEPMTSLNPYHRVGNQITESILLHSKSSKKDAID 132
Query: 112 E--KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLR 169
E K+ + ++ +E+ YP +LSGGQ+QRV IA ALV +PE+L+ DEP + LD ++
Sbjct: 133 EAKKLMALVEIDDVERRFYAYPHELSGGQRQRVMIAMALVNKPELLIADEPTTALDVTIQ 192
Query: 170 LEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKF 229
++ + +L+ ELG++ +++THD +D + V++ GKI++ G EV+ P +++
Sbjct: 193 AQILDLMSKLKNELGMSILFITHDLGLVQEFSDNVCVMKNGKIVEQGNTVEVFNNPSHEY 252
Query: 230 VGGFLGNPPMNFVEARVEDGKLL-ISE-NNYIPVPKQYRQIIERLNVKDVIIGFRPHDAE 287
L P ++ V D ++ I++ N Y +P K+ +
Sbjct: 253 TKKLLDAEPQPKLDNPVSDEPIIEINDLNVYYSIPS------TNFFKKNTFHAVKNTSFS 306
Query: 288 VIKGISEGIVGE 299
+ K + G+VGE
Sbjct: 307 IYKNTTIGLVGE 318
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 127 bits (316), Expect = 2e-28
Identities = 71/234 (30%), Positives = 134/234 (56%), Gaps = 4/234 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I +E + K +G F A+DN++ + +G LGP+G+GK+T + ++ GI P SG +
Sbjct: 1 MYAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDV 60
Query: 61 YFDERDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
D+ + P K + +G + +N +Y +T ++N+ F + K E ++++ ++ K
Sbjct: 61 RILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLK 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ + + R S G +QR+ +A+AL+ +PE+L+LDEP S LD V+ ++ R
Sbjct: 121 LVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVK-DIIRE 179
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGF 233
Q++ G T + +H +E +AD++ +I +GK+ VGT +E+ K Y + G+
Sbjct: 180 QRKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI--KKQYMELEGY 231
>pir||E72428 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980511|gb|AAD35121.1|AE001690_15 (AE001690)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 268
Score = 127 bits (316), Expect = 2e-28
Identities = 83/260 (31%), Positives = 146/260 (55%), Gaps = 23/260 (8%)
Query: 1 MVRIRLENIVKKFG-------NFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIY 53
M R+ ++N+ K F A+ N++ E+K+ E ++L+G SGSGK+T + +
Sbjct: 1 MSRLVVKNLTKIFSLGFFSKRRIEAVKNVSFEVKEKEIVSLVGESGSGKTTTAKMILRLL 60
Query: 54 KPTSGRIYFDERDVTE-------LPPKDRNIGLVFQNW-----ALYP-HMTVYKNIAFPL 100
PTSG IYF+ +D+ + L R + VFQ+ YP T+++ I+ L
Sbjct: 61 PPTSGEIYFEGKDIWKDIKDRESLVEFRRKVHAVFQDPFASYNPFYPVERTLWQAISL-L 119
Query: 101 ELRKAPKDEIDEKVRKVAKMLHIEK--LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLD 158
E + + K E E +++ + I+ +L +YP Q+SGGQ+QR+ IAR + P +++ D
Sbjct: 120 ENKPSNKKEALELIKESLFRVGIDPKDVLGKYPHQISGGQKQRIMIARCWILRPLLIVAD 179
Query: 159 EPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTP 218
EP S +DA R + L+ L++E G + I++THD A ++D I V++ G+I++ G P
Sbjct: 180 EPTSMIDASSRGGIIKLLEELREEQGTSIIFITHDLGLAYYVSDNIFVMKNGEIVERGHP 239
Query: 219 DEVYYKPMYKFVGGFLGNPP 238
D+V +P +++ +G+ P
Sbjct: 240 DKVVLEPTHEYTKLLVGSIP 259
>dbj|BAA75354.1| (AB011838) similar to B.subtilis ytsC gene(80%-identity) [Bacillus
halodurans]
Length = 202
Score = 126 bits (314), Expect = 3e-28
Identities = 67/193 (34%), Positives = 116/193 (59%), Gaps = 10/193 (5%)
Query: 1 MVRIRLENIVKKFGNFI----ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
M + NI K +G + L I++ ++ GEF++++G SGSGK+TLL ++ I K +
Sbjct: 1 MAILEATNIHKSYGTKLNKQEVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVLSSIDKLS 60
Query: 57 SGRIYFDERDVTELPPKD------RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEI 110
+G I + ++T L K+ +++G +FQ + L +TV +NI PL + K P+
Sbjct: 61 NGSIKIEGSEMTRLKEKELAQFRKKHLGFIFQEYNLLDTLTVKENILLPLSITKIPRKAA 120
Query: 111 DEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
DEK ++VA L I ++ D+YP ++SGGQ+QR + ARA + EP ++ DEP LD+
Sbjct: 121 DEKFKQVATELGIYEIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGALDSKSAS 180
Query: 171 EVRAELKRLQKEL 183
++ +L++L ++L
Sbjct: 181 DLLGKLQQLNEKL 193
>pir||D75142 oligopeptide transport ATP-binding protein appf PAB0631 -
Pyrococcus abyssi (strain Orsay)
>gi|5458364|emb|CAB49853.1| (AJ248285) OLIGOPEPTIDE
TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
Length = 322
Score = 126 bits (314), Expect = 3e-28
Identities = 95/317 (29%), Positives = 163/317 (50%), Gaps = 42/317 (13%)
Query: 4 IRLENIVKKFGNFI-------ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPT 56
+ ++N+ K F + + A+D ++ I +GE ++L+G SGSGK+T+ + + PT
Sbjct: 3 LEVQNLTKIFTSGLIGGYQVRAVDGVSFTINEGEIVSLVGESGSGKTTIGKLILRLLTPT 62
Query: 57 SGRIYFDERDVTELPPKD------RNIGLVFQN--WALYPHMTVYK------NIAFPLEL 102
SGRI F+ +D+ + K+ R + VFQ+ + P V K + FP
Sbjct: 63 SGRILFEGKDIMKFSKKELKTYYYRKVQAVFQDPFASFNPLHQVDKVFHMIFDSYFPDLG 122
Query: 103 RKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLS 162
R+ ++ ID+ + +V L+ ++ +YP QLSGGQ QR+ IARAL+ +P +L+ DE +S
Sbjct: 123 REEREEMIDKALEEVG--LNPSEVRGKYPHQLSGGQLQRILIARALLLKPRLLIADEAVS 180
Query: 163 NLDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVY 222
LDA R++V L + + G + +++THD A ++D ++ G I+++G ++V+
Sbjct: 181 MLDASTRIDVLNLLGEFRDKYGTSVLFITHDLALGYYISDSTIIMYRGTIVEMGETEKVF 240
Query: 223 YKPMYKFVGGFLGNPP-------MNFVEARVEDGKL-LISENNYIP-VPKQYRQIIERLN 273
+ P++ + L + P +E E+GK+ I Y P PK
Sbjct: 241 HNPLHPYTKMLLESVPDLNVKWEFKGIEPEKEEGKVWKIKGCRYAPRCPK---------- 290
Query: 274 VKDVIIGFRPHDAEVIK 290
KDV RP EV K
Sbjct: 291 AKDVCFKIRPTLIEVEK 307
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 126 bits (313), Expect = 4e-28
Identities = 81/228 (35%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M I + N+ K +G IA ++I + +K+GE +ALLGP+G+GK+TL+ + G PT G I
Sbjct: 1 MYVIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEI 60
Query: 61 YFDERDVTELPPKDRNI----GLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
V P DR++ G++ Q Y +TV+ NI + L+ A KDEI ++ +
Sbjct: 61 R-----VLGKKPTDRHVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEE 115
Query: 117 VAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAEL 176
+ + L + + LSGG ++R IA AL+ P++L+LDEP + LD R EV L
Sbjct: 116 LLERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEIL 175
Query: 177 KRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYK 224
++KE G + + TH EA +AD+I + KI+ GTP ++ K
Sbjct: 176 LNMRKE-GQSMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIKEK 221
>sp|P45289|SAPF_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
>gi|1075119|pir||E64134 peptide transport system
ATP-binding protein HI1642 - Haemophilus influenzae
(strain Rd KW20) >gi|1574490|gb|AAC23289.1| (U32837)
peptide ABC transporter, ATP-binding protein (sapF)
[Haemophilus influenzae Rd]
Length = 269
Score = 126 bits (313), Expect = 4e-28
Identities = 81/242 (33%), Positives = 139/242 (56%), Gaps = 19/242 (7%)
Query: 1 MVRIRLENIVKKF---------GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAG 51
M +++E++ K F F A+D ++ ++ + +A++G +GSGKSTL+ +AG
Sbjct: 1 MPLLQVEDLTKTFKGHASLFGRNQFNAVDKVSFTLERKQTLAIIGNNGSGKSTLVKMIAG 60
Query: 52 IYKPTSGRIYFDERDVT--ELPPKDRNIGLVFQ--NWALYPHMTVYKNIAFPLELRKAPK 107
I PTSGRI F++R++ + + ++I +VFQ N A P + + + + PL L A
Sbjct: 61 IIPPTSGRILFNDRELQYQDAQSRAKHIRMVFQDANSAFNPRLNIGQILDEPLSL--ATD 118
Query: 108 DEIDEKVRKVAKMLHIEKLLDRYP----WQLSGGQQQRVAIARALVKEPEVLLLDEPLSN 163
++ K+ + L + L Y LS Q+QRVA+ARAL+ EPE++++D+ + N
Sbjct: 119 WTETQRNEKIFETLSLVGLYPDYTNLNIKHLSISQKQRVALARALILEPEIIIIDDAIGN 178
Query: 164 LDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY 223
LDA +R+++ LQ+ LGI+ IYV D +AD I V+ EGK+++ G+P ++
Sbjct: 179 LDASVRIQLLNLTLDLQQRLGISYIYVGQDLGVIKHIADTIIVMDEGKMIEYGSPQNLFT 238
Query: 224 KP 225
P
Sbjct: 239 DP 240
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 126 bits (313), Expect = 4e-28
Identities = 72/224 (32%), Positives = 128/224 (57%), Gaps = 4/224 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M ++++NI K + L +I+L IK GE + L GP+G+GK+T + G+ +P SG++
Sbjct: 15 MDSLQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQL 74
Query: 61 YFDERDVTELPPKDR---NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKV 117
++ ++T LP R IG + Q +++ ++V NI +E+ + K+ I++K +
Sbjct: 75 LLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQKTHNL 134
Query: 118 AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELK 177
+ I L D LSGG+++R+ IAR+ V EP+ ++LDEPL+ +D L +++ +
Sbjct: 135 LEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIKKLIT 194
Query: 178 RLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
L +E I + H+ + L + DR VI EGK+L G+ E+
Sbjct: 195 YL-REFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEI 237
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 125 bits (312), Expect = 6e-28
Identities = 67/224 (29%), Positives = 128/224 (56%), Gaps = 3/224 (1%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M+ I + N+ K++G+ +AL+ ++ + + LLGP+G+GK+TL+ + I +P+ G +
Sbjct: 1 MMGISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNV 60
Query: 61 YFDERDVTELPPKD-RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
+ +V E P K +G + + YP++T Y+ + F +R K++ +V++V+
Sbjct: 61 SINGFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVST 120
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
+ H L+R + S G +QRV +A AL+ +P +++LDEP LD +E+R + ++
Sbjct: 121 LTHCRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKM 180
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY 223
+KE I + TH +EA +AD I +I G+++ G ++ Y
Sbjct: 181 KKEKLI--VLSTHLISEAELLADYIGIIDHGRLMHFGPVEKQRY 222
>emb|CAB92896.1| (AL356992) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 343
Score = 124 bits (308), Expect = 2e-27
Identities = 96/330 (29%), Positives = 161/330 (48%), Gaps = 22/330 (6%)
Query: 2 VRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY 61
+ + +E + K FG +++L + GE +LGPSG+GK+ L ++ G+ KP GR+
Sbjct: 10 IEVVVEGLTKSFGKQSIWRDVSLTLPAGEVSVMLGPSGTGKTVFLKSLIGLLKPEKGRVL 69
Query: 62 FDERDVTELPPKD-----RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
+ D+ P +D + GL+FQ+ AL+ M+++ NIAFPL R+ + + E R
Sbjct: 70 INGVDMVNSPERDIYETRKLFGLMFQDGALFGSMSLFDNIAFPL--REHTRKKESEIRRI 127
Query: 117 VAKMLHIEKLLD---RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVR 173
V + + + LL + P ++SGG ++R +ARALV +P+++L DEP S LD + +
Sbjct: 128 VMERIEVVGLLGAEGKLPGEISGGMRKRAGLARALVLDPQIILCDEPDSGLDPVRTAYIS 187
Query: 174 AELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGF 233
L L +L T + VTH+ A + D + ++ +++ G P EV V F
Sbjct: 188 QLLIDLNAQLDATMLIVTHNLDIAATVPDNMGMLFLRQLVTFG-PREVLLTSDEPVVAQF 246
Query: 234 LG---NPPMNFVEARVEDGKLLISENNYIP-VPKQYRQIIERLNVKDVIIGFRPHDAEVI 289
LG P+ E + D L +E + P P R I+ +L G P A +
Sbjct: 247 LGGRREGPIGMSEEK--DAATLAAEADAAPAAPAAPRVIVPQLEPSP---GLPPRRA--V 299
Query: 290 KGISEGIVGEVYSFEPLGREQIVTVSVNDS 319
+ ++G + + P R I DS
Sbjct: 300 ARRRKRVMGMIDTLPPAARSAIRDTYARDS 329
>pir||D83419 probable ATP-binding component of ABC transporter PA1807 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947791|gb|AAG05196.1|AE004607_2 (AE004607) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 536
Score = 122 bits (302), Expect = 9e-27
Identities = 87/302 (28%), Positives = 161/302 (52%), Gaps = 28/302 (9%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVA-----GIYKPTSGRIYFDERDVTELPPK 73
++ ++ +I+ GE +AL+G SGSGKS +++ + +G I++ D+ +LP +
Sbjct: 25 VEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLKLPER 84
Query: 74 ------DRNIGLVFQN--WALYPHMTVYKNIAFPLELRKAPKD-EIDEKVRKVAKMLHIE 124
I +VFQ +L P T+ K +A L L K + ++ ++ +++ I
Sbjct: 85 RLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIP 144
Query: 125 ---KLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
K L YP +LSGGQ+QRV IA AL EP++L+ DEP + LD ++L++ LK LQ
Sbjct: 145 EPAKRLKAYPHELSGGQRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQA 204
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
LG++ + +THD +A R+ V+++G+I++ + E++ P + + L P
Sbjct: 205 RLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQASCQELFAAPRHPYTRELLNAEPSG- 263
Query: 242 VEARVEDGKLLISENN---YIPVPK-QYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIV 297
A G+ L++ ++ + P+ K +R+ ++ + D + + E+ +G + GIV
Sbjct: 264 APASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGV------NFELPRGQTLGIV 317
Query: 298 GE 299
GE
Sbjct: 318 GE 319
Score = 116 bits (287), Expect = 5e-25
Identities = 74/224 (33%), Positives = 130/224 (58%), Gaps = 16/224 (7%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKD--- 74
A+D +N E+ G+ + ++G SGSGKSTL + + + + G I F+ + L D
Sbjct: 300 AVDGVNFELPRGQTLGIVGESGSGKSTLGLAILRLLE-SQGGIRFEGTRLDGLAQHDVRP 358
Query: 75 --RNIGLVFQN--WALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLD-- 128
R + +VFQ+ +L P M V + + L + + + E+ + + L +E LD
Sbjct: 359 LRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEA--EQEQAIIDAL-VEVGLDPQ 415
Query: 129 ---RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGI 185
RYP + SGGQ+QR+AIARALV +P ++LLDEP S LD ++ +V L++LQ + +
Sbjct: 416 TRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNL 475
Query: 186 TTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKF 229
T ++++HD A A++ ++ V+R GK+++ G+ + V+ P + +
Sbjct: 476 TYLFISHDLAVVKALSHQLMVVRHGKVVEQGSAEAVFASPQHPY 519
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 118 bits (292), Expect = 1e-25
Identities = 89/321 (27%), Positives = 155/321 (47%), Gaps = 28/321 (8%)
Query: 4 IRLENIVKKF----GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
+ ++++ KKF G IA++N++ GE + +LGP+G+GK+T L +A IY+P SG
Sbjct: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
Query: 60 IYFDERDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
+ D D + P + R I + Q L P ++V I + R K + + +
Sbjct: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
++ ++ + P+QLS G ++RV +A AL + ++ LDEP + +D + + +K
Sbjct: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPP 238
++ G+T I +HD E +ADR+ ++ +GKI+ G+P E+ K K V L P
Sbjct: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL-KKRFGKTVRIVLEEPI 242
Query: 239 MNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
NF L+ E +++ NVKDV + K + + I G
Sbjct: 243 KNFE---------LLKE-----------ELLRVKNVKDVRLARDDSFDVYFKSLDDSING 282
Query: 299 --EVYSFEPLGREQIVTVSVN 317
+V S + L + I T + N
Sbjct: 283 ILQVISPQELKIKDIFTATAN 303
>pir||C72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980544|gb|AAD35152.1|AE001692_9 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 331
Score = 115 bits (285), Expect = 9e-25
Identities = 87/302 (28%), Positives = 150/302 (48%), Gaps = 26/302 (8%)
Query: 14 GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDE--------- 64
G A+D ++ +I+ GE + L+G SG GKS ++ I P S RI E
Sbjct: 19 GTVKAVDGVSFDIRRGEILGLVGESGCGKSVTAQSILRIL-PKSARIVNGEIVFHRNGKT 77
Query: 65 RDVTELPP--------KDRNIGLVFQN--WALYPHMTVYKNIAFPLELRK-APKDEIDEK 113
D+T L P + ++I ++FQ + P TV + + L + K+E ++
Sbjct: 78 LDLTRLDPEGEEIRDIRGKDISMIFQEPMASFSPVYTVGAQMIEAILLHENVSKEEARKR 137
Query: 114 VRKVAKMLHI---EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRL 170
V ++ K + I EK++D YP++LSGG QR IA A+ P +LL DEP + LD ++
Sbjct: 138 VVEMLKKVKIPNAEKVVDMYPFELSGGMLQRCMIAMAMSLNPTLLLADEPTTALDVTIQA 197
Query: 171 EVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFV 230
++ +K LQKE + + +THD MADR+AV+ G I++ E++ P++ +
Sbjct: 198 QILYLMKELQKEYHSSILLITHDMGVVAQMADRVAVMYLGNIVETAEVFELFKNPLHPYT 257
Query: 231 GGFLGN-PPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVI 289
L + P + + R+E K ++ + +P ++ E+ +K + P + EV
Sbjct: 258 QALLRSIPKIGIRKTRLETIKGMVPDPYNLPTGCRFHNRCEKF-MKGLCDVKEPPEVEVK 316
Query: 290 KG 291
G
Sbjct: 317 PG 318
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 115 bits (284), Expect = 1e-24
Identities = 84/302 (27%), Positives = 149/302 (48%), Gaps = 27/302 (8%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ +E + KK G+ L I++++ +GE + LLGP+GSGK+TL+ + G+ K SG +
Sbjct: 6 LHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTIS 65
Query: 64 E-RDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDE-IDEKVRKVAKML 121
+ TE +G + +N YP++T ++N+ + K DE +DE V +V
Sbjct: 66 GFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMHKKIADERLDEVVERVGLTS 125
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
I + Y S G +QR+ IA+A++ P++L+LDEP + LD + R +K L +
Sbjct: 126 AIHDKVKTY----SLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAE 181
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKIL---------QVGTPDEVYYKPMYKFVGG 232
G ++ TH E + DR+ +I++G+I Q + +P K +
Sbjct: 182 MEGTAVLFATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQTTEKAIIEVQPQEKALNW 241
Query: 233 FLGNPPMNFVEARVEDGKLLI---SENNYIPVPKQYRQII-ERLNVKDVIIGFRPHDAEV 288
GN +A +DG +++ EN +P+ R ++ + LNV + + + E
Sbjct: 242 LTGNQ----YQAESQDGTIVVEVAKEN----IPELNRSLVGQDLNVFSITPYTQSLEDEF 293
Query: 289 IK 290
IK
Sbjct: 294 IK 295
>pir||D70184 probable ribose/galactose ABC transporter mglA - Lyme disease
spirochete >gi|2688601|gb|AAC67018.1| (AE001168)
ribose/galactose ABC transporter, ATP-binding protein
(mglA) [Borrelia burgdorferi]
Length = 536
Score = 113 bits (280), Expect = 3e-24
Identities = 82/295 (27%), Positives = 149/295 (49%), Gaps = 18/295 (6%)
Query: 6 LENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
LENI KK+G+F+A DN++++ K GE A+LG +G+GK+TL+ T+ GI++ SGRI +
Sbjct: 8 LENITKKYGDFVANDNVSIKFKAGEVHAILGENGAGKTTLMKTIYGIHQVNSGRIILKGQ 67
Query: 66 DVTELPPKD---RNIGLVFQNWALYPHMTVYKNIAFPLELRK---APKDEIDEKVRKVAK 119
++ + IG+VFQ++ L P T +NI E K + +K+ +++
Sbjct: 68 EINFKDSSEAIRNGIGMVFQHFMLIPQFTAVQNIILGYENSKFGFLDYKQARKKISSLSE 127
Query: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
++ L++ LS G +Q++ I + L + ++++ DEP + L A ++ + ++
Sbjct: 128 KYGLKIDLEKRVEDLSVGMEQKIEILKVLYRNADIIIFDEPTAVL-APSEVDDFINILKV 186
Query: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPM 239
+ G T I +TH E ++A + ++R GK+++ ++ K + K + G
Sbjct: 187 LAQEGHTVILITHKIKEIRSIAKKCTIMRLGKVVKTVNIADIDDKDLTKLMIG------- 239
Query: 240 NFVEARVEDGKLLISENNYIPVPKQYRQIIER--LNVKDVIIGFRPHDAEVIKGI 292
E + K+ + I K ER L VKDV + R + I GI
Sbjct: 240 --KEVALRSSKIKFENHFNILEIKNLSVKDERGVLKVKDVNLDLRNGEILGISGI 292
>pir||C82442 probable peptide ABC transporter, ATP-binding protein VCA0588
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9657999|gb|AAF96490.1| (AE004389) peptide ABC
transporter, ATP-binding protein, putative [Vibrio
cholerae]
Length = 530
Score = 113 bits (279), Expect = 4e-24
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 27/301 (8%)
Query: 20 DNINLEIKDGEFMALLGPSGSGKSTLLYTVA-----GIYKPTSGRIYFDERDVTELPPK- 73
+ ++L I GE +AL+G SGSGKS + G SG I+F + D +
Sbjct: 26 EGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERA 85
Query: 74 -----DRNIGLVFQN--WALYPHMTVYKNIAFPLELRK-----APKDEIDEKVRKVAKML 121
IG++FQ +L P + K + L + + A + + E + KV +
Sbjct: 86 LRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVG-IR 144
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
H E ++ YP +LSGG++QRV IA AL+ EPE+L+ DEP + LD ++ ++ LK LQ+
Sbjct: 145 HPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQ 204
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNF 241
ELG+ +++THD + +ADR+AV++ G++++ ++ P + + + P
Sbjct: 205 ELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADPRGV 264
Query: 242 VEARVEDGKLLISENN---YIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
D L+ + P+ Y + + I + KG S G+VG
Sbjct: 265 PVPTAMDAPTLLQAEKLRVWFPIKGGYFR-----RTQAYIKAVTDMSFTLAKGQSLGLVG 319
Query: 299 E 299
E
Sbjct: 320 E 320
Score = 109 bits (269), Expect = 6e-23
Identities = 73/221 (33%), Positives = 125/221 (56%), Gaps = 10/221 (4%)
Query: 18 ALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVT-----ELPP 72
A+ +++ + G+ + L+G SGSGKST + + + G I F +D+ E+ P
Sbjct: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA-SQGAIRFAGQDLQALKRREMLP 359
Query: 73 KDRNIGLVFQN--WALYPHMTVYKNIAFPLELR-KAPKDEIDEKVRKVAKMLHIE-KLLD 128
+ +VFQ+ AL P M+V + I L + + DEID + V + + ++
Sbjct: 360 YRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRH 419
Query: 129 RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTI 188
RYP + SGGQ+QR+AIARALV +PE +LLDEP S+LD ++ +V LK LQ++ +T +
Sbjct: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
Query: 189 YVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKF 229
+++HD A A+ V++ G+I++ G ++ P + +
Sbjct: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPY 520
>dbj|BAB06041.1| (AP001515) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 522
Score = 112 bits (277), Expect = 7e-24
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 24/315 (7%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ + +I K+F ALD + L+++ G AL+G +G+GKSTL+ + G+YKP G+I FD
Sbjct: 7 LEMVDITKEFPGVKALDRVQLKVRKGSVHALMGENGAGKSTLMKILIGMYKPNEGKIIFD 66
Query: 64 ERDVT---ELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEK-----VR 115
+VT D+ I ++ Q + P MTV +NI E +D K R
Sbjct: 67 GEEVTFNSINDALDKGISMIHQELSPIPEMTVAENIFLGREPTFGKSGLVDNKKLIEMTR 126
Query: 116 KVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
+ + L I + +LS Q + IA+A+ +++++DEP S A+ EV
Sbjct: 127 NLLESLEINIDPRKKMGELSIANTQMIEIAKAISFHSKLVIMDEPTS---AITEKEVAQL 183
Query: 176 LKRLQ--KELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGF 233
K ++ K+ G+ IY+TH +E +AD I+V R+GK + T + + K + G
Sbjct: 184 FKMIESLKKKGVGIIYITHKMSELDEIADDISVFRDGKYIGTDTAKNLTRDDLIKMMVGR 243
Query: 234 LGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGF-------RPHDA 286
N + E ++ G++++S + + Y + + K I+GF R
Sbjct: 244 ELNQIFDKPEPKL--GEVILSVKSL--TKQDYFEDVSFEVRKGEIVGFAGLMGSGRTEVL 299
Query: 287 EVIKGISEGIVGEVY 301
E I G+ E GE++
Sbjct: 300 ETIFGVKEAESGEIF 314
Score = 88.9 bits (217), Expect = 8e-17
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 21/229 (9%)
Query: 20 DNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKD---RN 76
++++ E++ GE + G GSG++ +L T+ G+ + SG I+ + + P+D N
Sbjct: 273 EDVSFEVRKGEIVGFAGLMGSGRTEVLETIFGVKEAESGEIFVNGQKARIKSPQDAVKNN 332
Query: 77 IGLVFQN---WALYPHMTVYKNIAFP----------LELRKAPKDEIDEKVRKVAKMLHI 123
+G + ++ L+ ++V +N+ L ++ KD +K + K I
Sbjct: 333 MGFLTEDRKLTGLFLPLSVRENMITVNIDKYINMGWLNGKRVKKDCEQQKQKLYIKTPSI 392
Query: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
E++++ LSGG QQ+V +AR L+K P++L LDEP +D + E + L +
Sbjct: 393 EQIVEN----LSGGNQQKVLLARWLLKNPDILFLDEPTRGIDVGAKSEFYNLIFELASQ- 447
Query: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGG 232
G + V+ + AE L + DRI V+ EGK+ T +E + + ++ G
Sbjct: 448 GKAIVVVSSEMAEILGLCDRILVMHEGKVTGELTREEANQEKIMQYATG 496
>gi|10954710 hypothetical ABC-transporter gene~similar to moaD gene
[Agrobacterium rhizogenes] >gi|8918710|dbj|BAA97775.1|
(AB039932) hypothetical ABC-transporter gene~similar to
moaD gene [Agrobacterium rhizogenes]
>gi|10567374|dbj|BAB16183.1| (AP002086) hypothetical
ABC-transporter gene~similar to moaD gene [Agrobacterium
rhizogenes]
Length = 603
Score = 110 bits (273), Expect = 2e-23
Identities = 70/243 (28%), Positives = 131/243 (53%), Gaps = 8/243 (3%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+R + F A+ +++ +K GE ++G SG GKSTL +A + +P +GRI F
Sbjct: 290 VRRRDAFNAFNEVKAVRDVSFTVKAGENFGIVGESGCGKSTLTRLLAWLEQPNAGRIAFL 349
Query: 64 ERDVTELPPKD-----RNIGLVFQN--WALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK 116
++++ L + ++ L+ Q+ +L M++ + I PL + + + +++ ++
Sbjct: 350 GKNLSNLSARSLTEMRKSFQLLLQDPYGSLPAGMSIIRMIEEPLLIHGVARRDAEQRAQE 409
Query: 117 VAKMLHIEK-LLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
+ + + L +R P LS GQ+QR+ IARALV +P +L+LDE LS LD + + E+
Sbjct: 410 AMREVGLHADLAERLPVGLSAGQRQRINIARALVLKPRLLILDETLSALDQVEQAELLDL 469
Query: 176 LKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLG 235
KRLQ G + I+++HD A + R+AV+ G+I+++ ++ P + + L
Sbjct: 470 FKRLQAAHGFSYIFISHDLALVRRICHRVAVMYLGRIVELADNKTLFEHPHHPYTRALLS 529
Query: 236 NPP 238
P
Sbjct: 530 AMP 532
Score = 90.5 bits (221), Expect = 3e-17
Identities = 78/301 (25%), Positives = 134/301 (43%), Gaps = 22/301 (7%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYT-VAGIYKP---TSGRIYFDERDVTELPPKD 74
+DN++ ++ GE + L+G +GSGKS L V I P +SG++ F+ +DV L +
Sbjct: 25 VDNVDFALQPGEVLGLVGEAGSGKSVLARAMVNAIQAPLDISSGQVIFEGKDVLSLDARG 84
Query: 75 ------RNIGLVFQN--WALYPHMTVYKNIAFPLELRKAP--KDEIDEKVRKVAKMLHIE 124
IG + N +L P + + I L + K E EKV + +HI
Sbjct: 85 LRSIRGNRIGFIGANPMGSLDPRLPIGHQIVEKLRSVRPDIGKAEAKEKVLDLLGRVHIP 144
Query: 125 KLLDRY---PWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
R+ P+Q SGG QRV I ALV EP +++ D LD + ++ + L++
Sbjct: 145 SPRSRFHEAPFQFSGGMMQRVMIVDALVSEPSLVIADNITQPLDVTVAAQIIRLIDNLRE 204
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPP--- 238
L ++++ +A+R V++ G+I++ G ++ P + L P
Sbjct: 205 SLDTAFLFISSSLPVVSKIAERTLVMQGGRIVEQGETADIAANPQQAYTRALLSRIPSIW 264
Query: 239 MNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
N +DG+ +++ N R+ + N + + R V G + GIVG
Sbjct: 265 KNVSAPEAKDGEAVLTVENATRTYSVRRR--DAFNAFNEVKAVRDVSFTVKAGENFGIVG 322
Query: 299 E 299
E
Sbjct: 323 E 323
>pir||D64507 methyl coenzyme M reductase system, component A2 homolog -
Methanococcus jannaschii
Length = 558
Score = 101 bits (250), Expect = 1e-20
Identities = 88/318 (27%), Positives = 157/318 (48%), Gaps = 39/318 (12%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M+ ++++N+ KK+G+F ALD ++ E K GE + ++G SG+GKSTL+ + G +
Sbjct: 4 MITVKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLI-------RILRGSL 56
Query: 61 YFDERDVTELPPKD--RNIGLVF--QNWALYPHMTVYKNIAFPLELR-----KAPKDEID 111
+DE +V L KD + I + +N+AL+ + I +R + P +E
Sbjct: 57 DYDEGEVEILGRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEEEW 116
Query: 112 EKVRKVA----KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPE----VLLLDEPLSN 163
E+ K A K++ +E D + LSGG++QR+ + R + K E VLLLDEP +
Sbjct: 117 EEYEKTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATM 176
Query: 164 LDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY 223
+ ++ +K ++ +LGIT I +H + DR+ ++ GK+ G +EV
Sbjct: 177 ACPASKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVLN 236
Query: 224 KPMYKFVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQII--ERLNVKDVIIGF 281
+ + K + P ++D ++ N V K+Y + E LN+++V F
Sbjct: 237 EFLKKMKPPYKRTP-------NIKDNAIIQVRN----VSKRYYVVHGGETLNLRNV--SF 283
Query: 282 RPHDAEVIKGISEGIVGE 299
+ E++ I VG+
Sbjct: 284 DVKEGEILSIIGPSGVGK 301
>gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, component A2-like
[Methanococcus jannaschii]
Length = 555
Score = 101 bits (250), Expect = 1e-20
Identities = 88/318 (27%), Positives = 157/318 (48%), Gaps = 39/318 (12%)
Query: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
M+ ++++N+ KK+G+F ALD ++ E K GE + ++G SG+GKSTL+ + G +
Sbjct: 1 MITVKVKNLTKKYGDFKALDKVSFEAKKGEILGIVGKSGAGKSTLI-------RILRGSL 53
Query: 61 YFDERDVTELPPKD--RNIGLVF--QNWALYPHMTVYKNIAFPLELR-----KAPKDEID 111
+DE +V L KD + I + +N+AL+ + I +R + P +E
Sbjct: 54 DYDEGEVEILGRKDNFKEITAIHLQRNFALWAEPVINNIIRKLYAIRNNADEQLPLEEEW 113
Query: 112 EKVRKVA----KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPE----VLLLDEPLSN 163
E+ K A K++ +E D + LSGG++QR+ + R + K E VLLLDEP +
Sbjct: 114 EEYEKTAIEILKLVGLEHKKDAFANILSGGEKQRLILGRQIAKIYEKGEGVLLLDEPATM 173
Query: 164 LDALLRLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY 223
+ ++ +K ++ +LGIT I +H + DR+ ++ GK+ G +EV
Sbjct: 174 ACPASKQKLLDVIKNIRDKLGITVIITSHLPEIHRYLCDRLILLENGKVKMDGDVEEVLN 233
Query: 224 KPMYKFVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQII--ERLNVKDVIIGF 281
+ + K + P ++D ++ N V K+Y + E LN+++V F
Sbjct: 234 EFLKKMKPPYKRTP-------NIKDNAIIQVRN----VSKRYYVVHGGETLNLRNV--SF 280
Query: 282 RPHDAEVIKGISEGIVGE 299
+ E++ I VG+
Sbjct: 281 DVKEGEILSIIGPSGVGK 298
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 96.7 bits (237), Expect = 4e-19
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 11 KKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTEL 70
K G +A+ ++ ++ GE LG +G+GK+T L ++G PTSG + +D+
Sbjct: 1394 KHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVAS 1453
Query: 71 PPKDR-NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDR 129
P R +IG Q AL+ ++TV +++ ++ ID V + + K +
Sbjct: 1454 PKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHK 1513
Query: 130 YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGIT-TI 188
+ LSGG ++++++A A++ +P +++LDEP + +D + + + + RL G T I
Sbjct: 1514 PSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVI 1573
Query: 189 YVTHDQAEALAMADRIAVIREGKILQVGTPDEV---YYKPMYKFVGGFLGNPPMNFVEAR 245
TH EA A+ RI ++ G++ +G+P + Y + V + G P
Sbjct: 1574 LTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGNHLELEVPFYNGVKPNEVSNVE 1633
Query: 246 VEDGKLLISENNYIPVPKQYRQIIERL----NVKDVIIGFRPHDAEVIKGISEGIVGEVY 301
+E+ +I + + VP Q R ++ L V D I +E+ +S +V +
Sbjct: 1634 LENFCQIIQQWLF-NVPTQPRSLLGDLEVCIGVSDSITPDTASASEI--SLSPEMVQRIA 1690
Query: 302 SFEPLGREQIVTVSV 316
F LG EQ V+ V
Sbjct: 1691 KF--LGNEQRVSTLV 1703
Score = 89.3 bits (218), Expect = 6e-17
Identities = 55/219 (25%), Positives = 115/219 (52%), Gaps = 7/219 (3%)
Query: 4 IRLENIVKKF----GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG- 58
I++ N+ K + GN A++++ L + + + ++LLG +G+GKST + + G+ PTSG
Sbjct: 449 IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGD 508
Query: 59 RIYFDERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
+ +T + + +G+ Q+ L+P +TV +++ L+ + + V +A
Sbjct: 509 ALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVDMA 568
Query: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
+ + + ++ LSGG ++++++ AL+ +V++LDEP S +D +K+
Sbjct: 569 EEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKK 628
Query: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGT 217
++K G + TH EA + DRI ++ G + G+
Sbjct: 629 IKK--GRIILLTTHSMDEAEELGDRIGIMANGSLKCCGS 665
>pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana (fragment)
Length = 1246
Score = 96.7 bits (237), Expect = 4e-19
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 11 KKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTEL 70
K G +A+ ++ ++ GE LG +G+GK+T L ++G PTSG + +D+
Sbjct: 824 KHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVAS 883
Query: 71 PPKDR-NIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDR 129
P R +IG Q AL+ ++TV +++ ++ ID V + + K +
Sbjct: 884 PKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHK 943
Query: 130 YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGIT-TI 188
+ LSGG ++++++A A++ +P +++LDEP + +D + + + + RL G T I
Sbjct: 944 PSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVI 1003
Query: 189 YVTHDQAEALAMADRIAVIREGKILQVGTPDEV---YYKPMYKFVGGFLGNPPMNFVEAR 245
TH EA A+ RI ++ G++ +G+P + Y + V + G P
Sbjct: 1004 LTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGNHLELEVPFYNGVKPNEVSNVE 1063
Query: 246 VEDGKLLISENNYIPVPKQYRQIIERL----NVKDVIIGFRPHDAEVIKGISEGIVGEVY 301
+E+ +I + + VP Q R ++ L V D I +E+ +S +V +
Sbjct: 1064 LENFCQIIQQWLF-NVPTQPRSLLGDLEVCIGVSDSITPDTASASEI--SLSPEMVQRIA 1120
Query: 302 SFEPLGREQIVTVSV 316
F LG EQ V+ V
Sbjct: 1121 KF--LGNEQRVSTLV 1133
>pir||F75032 rnase l inhibitor PAB0824 - Pyrococcus abyssi (strain Orsay)
>gi|5458668|emb|CAB50155.1| (AJ248287) RNASE L INHIBITOR
[Pyrococcus abyssi]
Length = 593
Score = 85.4 bits (208), Expect = 9e-16
Identities = 63/205 (30%), Positives = 107/205 (51%), Gaps = 20/205 (9%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ +VK +G+F L+ EI+ GE + ++GP+G GK+T + +AG+ +PT G++ +D
Sbjct: 344 VEYPRLVKDYGSF-KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWD 402
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK--VAKML 121
+ K + I ++ TVY+ ++ K +++ K + K L
Sbjct: 403 ----LTVAYKPQYIKAEYEG-------TVYELLS------KIDSSKLNSNFYKTELLKPL 445
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
I L DR LSGG+ QRVAIA L+++ ++ LLDEP + LD RL V ++ L +
Sbjct: 446 GIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLME 505
Query: 182 ELGITTIYVTHDQAEALAMADRIAV 206
+ T + V HD ++DR+ V
Sbjct: 506 KNEKTALVVEHDVLMIDYVSDRLIV 530
Score = 78.8 bits (191), Expect = 9e-14
Identities = 89/312 (28%), Positives = 143/312 (45%), Gaps = 37/312 (11%)
Query: 7 ENIVKKFG-NFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
E+ V ++G N L + + +KDG + ++GP+G+GK+T + +AG P ++
Sbjct: 81 EDCVHRYGVNAFVLYRLPI-VKDGMVVGIVGPNGTGKTTAVKILAGQLIPN----LCEDN 135
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKN-----IAFPLELRKAPK----------DEI 110
D + N+ F+ L + KN + P + PK ++
Sbjct: 136 DSWD------NVIRAFRGNELQNYFERLKNGEIRPVVKPQYVDLLPKAVKGKVRELLKKV 189
Query: 111 DE--KVRKVAKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALL 168
DE K +V K L +E +LDR QLSGG+ QRVAIA AL+++ DEP S LD
Sbjct: 190 DEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQ 249
Query: 169 RLEVRAELKRLQKELGITTIYVTHDQAEALAMADRIAVI-REGKILQVGTPDEVYYKPMY 227
RL+V ++RL E G + V HD A ++D I V+ E + + + + +
Sbjct: 250 RLKVARVIRRLANE-GKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGIN 308
Query: 228 KFVGGFLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDV-IIGFRPHDA 286
+F+ G+L + + F + KL + + V ++ RL VKD
Sbjct: 309 EFLQGYLKDENVRFRPYEIRFTKL----SERVDVERETLVEYPRL-VKDYGSFKLEVEPG 363
Query: 287 EVIKGISEGIVG 298
E+ KG GIVG
Sbjct: 364 EIRKGEVIGIVG 375
>emb|CAA91229.1| (Z56283) orf1 [Lactobacillus helveticus]
Length = 444
Score = 85.0 bits (207), Expect = 1e-15
Identities = 84/326 (25%), Positives = 145/326 (43%), Gaps = 37/326 (11%)
Query: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDERDVTELPPKDRNIG 78
++ +N+ I G F L+GP+G GKSTLL +AG+Y +G++ ++ +
Sbjct: 13 INQLNMNIAPG-FNLLIGPTGCGKSTLLKIIAGLYPKYAGKL------TGKIDLHGQKAA 65
Query: 79 LVFQNWALYPHMTVYKN-IAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLDRYPWQLSGG 137
++FQN A MT + I F LE + + D ++K + I LLD+ LSGG
Sbjct: 66 MMFQNAAEQFTMTTPREEIIFALENLQIKAKDYDLHIKKAVEFTKIADLLDQKINTLSGG 125
Query: 138 QQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYVTHDQAEA 197
QQQ VA+A + + +V LLDEP ++ D R + +L L E G T I H +
Sbjct: 126 QQQHVALAVLIAMDVDVFLLDEPFASCDPNTRHFLIEKLASL-AETGRTIILSDHVLDDY 184
Query: 198 LAMADRIAVIREGKILQVGTPDE---------VYYKPMYKFVGGFLGNPPMNFVEARVED 248
+ D + EGK ++ + +E +++ Y F G P + +++
Sbjct: 185 EKICDHLYQF-EGKTVKELSANEKNKLFKQNKQFHEQSYSFALP-TGTPVFELNKTQIKQ 242
Query: 249 GKLLISEN--------------NYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISE 294
+LL+ +N N + ++ + + + K F D E+ K
Sbjct: 243 NRLLLKQNKLKIYGKTTLITGSNGVGKTSLFKAMTKMIPYKG---NFTYLDNEISKIKYR 299
Query: 295 GIVGEVYSFEPLGREQIVTVSVNDSI 320
+ ++ F +Q +TV+V D I
Sbjct: 300 KYLSQIAQFFQKASDQFLTVTVKDEI 325
>pir||G71136 probable transport protein - Pyrococcus horikoshii
>gi|3257270|dbj|BAA29953.1| (AP000003) 590aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 590
Score = 82.3 bits (200), Expect = 8e-15
Identities = 63/215 (29%), Positives = 112/215 (51%), Gaps = 21/215 (9%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
+ +VK +G+F L+ EI+ GE + ++GP+G GK+T + +AG+ +PT G++ +D
Sbjct: 340 VEYPRLVKDYGSF-KLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWD 398
Query: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRK--VAKML 121
+ K + I ++ TVY ++ K +++ K + K L
Sbjct: 399 ----LTVAYKPQYIKAEYEG-------TVYDLLS------KIDASKLNSNFYKTELLKPL 441
Query: 122 HIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK 181
I L D+ +LSGG+ QRVAIA L+++ ++ LLDEP + LD RL ++ L +
Sbjct: 442 GIIDLYDKNVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLATSRAIRHLME 501
Query: 182 ELGITTIYVTHDQAEALAMADRIAVIREGKILQVG 216
+ T + V HD ++DR+ ++ EG+ + G
Sbjct: 502 KNEKTALVVEHDVLMIDYVSDRL-IVFEGEPSKYG 535
Score = 77.3 bits (187), Expect = 3e-13
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 27/307 (8%)
Query: 7 ENIVKKFG-NFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFDER 65
E+ V ++G N L + + +KDG + ++GP+G+GK+T + +AG P + D
Sbjct: 77 EDCVHRYGVNAFVLYRLPV-VKDGMVVGIVGPNGTGKTTAVKILAGQLIP---NLCCDND 132
Query: 66 DVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLE---LRKAPKDEIDEKVRKV----- 117
++ R G QN+ K + P L KA K ++ E ++KV
Sbjct: 133 SWDDVIKAFR--GSELQNYFEKLKNGEIKPVVKPQYVDLLPKAVKGKVGELLKKVDETGK 190
Query: 118 ----AKMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVR 173
K+L +EK+L+R QLSGG+ QRVAIA A++++ DEP S LD RL V
Sbjct: 191 FEEIVKVLELEKVLEREIDQLSGGELQRVAIAAAILRKAHFYFFDEPSSYLDIRQRLNVA 250
Query: 174 AELKRLQKELGITTIYVTHDQAEALAMADRIAVI-REGKILQVGTPDEVYYKPMYKFVGG 232
++RL E G + V HD A ++D + ++ E + + + + + +F+ G
Sbjct: 251 RVIRRLADE-GKAVLVVEHDLAVLDYLSDIVHIVYGEPGVYGIFSQPKGTRNGINEFLQG 309
Query: 233 FLGNPPMNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDV-IIGFRPHDAEVIKG 291
+L + + F ++ KL + + V ++ RL VKD E+ KG
Sbjct: 310 YLKDENVRFRPYEIKFTKL----SERVEVERETLVEYPRL-VKDYGSFKLEVEPGEIRKG 364
Query: 292 ISEGIVG 298
GIVG
Sbjct: 365 EVIGIVG 371
>gb|AAC69557.2| (AF076529) ATP binding protein BviA [Butyrivibrio fibrisolvens]
Length = 280
Score = 80.8 bits (196), Expect = 2e-14
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIY-F 62
I + N+ KK+ F L+ L I G+ + L+G +G+GKSTL+ + + SG I F
Sbjct: 6 IEICNLKKKYDGF-ELNIPKLYIGKGQCIGLIGENGAGKSTLIKLILQLIGKDSGEILIF 64
Query: 63 DERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLH 122
+ V++ K+ I +VF ++T+ + + DE + +A L
Sbjct: 65 GDTIVSKQTKKE--ISVVFDTNNYNGNLTINELNIILNRIFGRKWDEKKYFNQVMANGLP 122
Query: 123 IEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKE 182
EK +D + S G + ++ I A P +L+LDE SNLD ++R+E+ +K+ ++
Sbjct: 123 REKKIDTF----SLGMKAKLNIIIAFSHNPRILILDEATSNLDPVVRIEINNIIKQYIRD 178
Query: 183 LGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFV 242
G T ++ +H E +ADR+ +R+GKI TP Y+ N+
Sbjct: 179 TGCTVVFSSHIVNELEEIADRLLFLRKGKIALDTTP--------YRLRN--------NYR 222
Query: 243 EARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIK-GISEGIV 297
+++D KLL + + + Y + N+KD H+ E++K G+S G V
Sbjct: 223 LIKIKDKKLLSDDMLAVERNEGYYLCLTD-NIKD------KHETEIVKQGVSTGEV 271
>gi|6320339 metal resistance protein, similar to multidrug resistance proteins
and cystic fibrosis protein CFTR; Ycf1p [Saccharomyces
cerevisiae] >gi|6920083|sp|P39109|YCFI_YEAST METAL
RESISTANCE PROTEIN YCF1 (YEAST CADMIUM FACTOR 1)
>gi|1077042|pir||S51863 cadmium resistance protein YCF1
- yeast (Saccharomyces cerevisiae)
>gi|665668|emb|CAA88217.1| (Z48179) unknown
[Saccharomyces cerevisiae]
Length = 1515
Score = 70.2 bits (169), Expect = 3e-11
Identities = 73/296 (24%), Positives = 131/296 (43%), Gaps = 36/296 (12%)
Query: 17 IALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG--RIYFDERDVTELPPKD 74
+AL NIN + K G ++G GSGK+ LL + G G ++ V+++P
Sbjct: 644 VALKNINFQAKKGNLTCIVGKVGSGKTALLSCMLGDLFRVKGFATVHGSVAYVSQVP--- 700
Query: 75 RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLD------ 128
W + + TV +NI F + + ++ ++ A + + L+D
Sbjct: 701 ---------WIM--NGTVKENILFG---HRYDAEFYEKTIKACALTIDLAILMDGDKTLV 746
Query: 129 -RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITT 187
LSGGQ+ R+++ARA+ + LLD+PL+ +D + + + L T
Sbjct: 747 GEKGISLSGGQKARLSLARAVYARADTYLLDDPLAAVDEHVARHLIEHVLGPNGLLHTKT 806
Query: 188 IYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY---KPMYKFVGGFLGNPPMNFVEA 244
+ ++ AL++AD IA++ G+I Q GT DE+ P++K + + N
Sbjct: 807 KVLATNKVSALSIADSIALLDNGEITQQGTYDEITKDADSPLWKLLNNY--GKKNNGKSN 864
Query: 245 RVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
D + IPV + Q +++LN D F DA ++ S+ +G +
Sbjct: 865 EFGDSSESSVRESSIPVEGELEQ-LQKLNDLD----FGNSDAISLRRASDATLGSI 915
>gb|AAA50353.1| (L35237) metal resistance protein [Saccharomyces cerevisiae]
Length = 1515
Score = 69.9 bits (168), Expect = 4e-11
Identities = 73/296 (24%), Positives = 131/296 (43%), Gaps = 36/296 (12%)
Query: 17 IALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSG--RIYFDERDVTELPPKD 74
+AL NIN + K G ++G GSGK+ LL + G G ++ V+++P
Sbjct: 644 VALKNINFQAKKGNLTCIVGKVGSGKTALLSCMLGDRFRVKGFATVHGSVAYVSQVP--- 700
Query: 75 RNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHIEKLLD------ 128
W + + TV +NI F + + ++ ++ A + + L+D
Sbjct: 701 ---------WIM--NGTVKENILFG---HRYDAEFYEKTIKACALTIDLAILMDGDKTLV 746
Query: 129 -RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITT 187
LSGGQ+ R+++ARA+ + LLD+PL+ +D + + + L T
Sbjct: 747 GEKGISLSGGQKARLSLARAVYARADTYLLDDPLAAVDEHVARHLIEHVLGPNGLLHTKT 806
Query: 188 IYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYY---KPMYKFVGGFLGNPPMNFVEA 244
+ ++ AL++AD IA++ G+I Q GT DE+ P++K + + N
Sbjct: 807 KVLATNKVSALSIADSIALLDNGEITQQGTYDEITKDADSPLWKLLNNY--GKKNNGKSN 864
Query: 245 RVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVGEV 300
D + IPV + Q +++LN D F DA ++ S+ +G +
Sbjct: 865 EFGDSSESSVRESSIPVEGELEQ-LQKLNDLD----FGNSDAISLRRASDATLGSI 915
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134386262
Number of Sequences: 2977
Number of extensions: 5998065
Number of successful extensions: 27301
Number of sequences better than 1.0e-10: 2390
Number of HSP's better than 0.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 1655
Number of HSP's that attempted gapping in prelim test: 22032
Number of HSP's gapped (non-prelim): 3038
length of query: 362
length of database: 189,106,746
effective HSP length: 56
effective length of query: 306
effective length of database: 155,591,474
effective search space: 47610991044
effective search space used: 47610991044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)