BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2253 (2pgk) DE:2-PHOSPHOGLYCERATE KINASE.
(302 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75203 2-phosphoglycerate kinase. PAB2253 - Pyrococcus abys... 586 e-166
pir||C71236 probable 2-phosphoglycerate kinase - Pyrococcus hori... 526 e-148
pir||A64485 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanococc... 225 6e-58
gb|AAC25559.1| (AF013169) 2-phosphoglycerate kinase [Pyrococcus ... 222 3e-57
pir||S41582 2-phosphoglycerate kinase - Methanothermus fervidus ... 217 2e-55
pir||A69119 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanobact... 215 5e-55
pir||G75386 probable 2-phosphoglycerate kinase - Deinococcus rad... 171 1e-41
pir||D69112 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanobact... 131 8e-30
dbj|BAB10444.1| (AB016887) contains similarity to ATP/GTP nucleo... 79 7e-14
emb|CAC11895.1| (AL445065) 2-phosphoglycerate kinase related pro... 73 3e-12
emb|CAB71280.1| (AL138618) hypothetical protein L2954.08 [Leishm... 73 5e-12
>pir||A75203 2-phosphoglycerate kinase. PAB2253 - Pyrococcus abyssi (strain
Orsay) >gi|5457581|emb|CAB49072.1| (AJ248283)
2-PHOSPHOGLYCERATE KINASE. [Pyrococcus abyssi]
Length = 302
Score = 586 bits (1494), Expect = e-166
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MIRVVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRK 60
MIRVVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRK
Sbjct: 1 MIRVVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRK 60
Query: 61 LTYQKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVI 120
LTYQKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVI
Sbjct: 61 LTYQKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVI 120
Query: 121 GTDSIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAII 180
GTDSIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAII
Sbjct: 121 GTDSIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAII 180
Query: 181 ERAKREGLNAIIEGIHVVPGFVDVKGEMTFMYMIVARSREDLEARFYERTRYSKRSANYY 240
ERAKREGLNAIIEGIHVVPGFVDVKGEMTFMYMIVARSREDLEARFYERTRYSKRSANYY
Sbjct: 181 ERAKREGLNAIIEGIHVVPGFVDVKGEMTFMYMIVARSREDLEARFYERTRYSKRSANYY 240
Query: 241 ISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGLDMLEE 300
ISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGLDMLEE
Sbjct: 241 ISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGLDMLEE 300
Query: 301 PK 302
PK
Sbjct: 301 PK 302
>pir||C71236 probable 2-phosphoglycerate kinase - Pyrococcus horikoshii
>gi|3256535|dbj|BAA29218.1| (AP000001) 301aa long
hypothetical 2-phosphoglycerate kinase [Pyrococcus
horikoshii]
Length = 301
Score = 526 bits (1341), Expect = e-148
Identities = 261/301 (86%), Positives = 285/301 (93%)
Query: 1 MIRVVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRK 60
MIRV+EKG V+LPFSRGILTRSITSVGIDVDLAYSIAIEVQEEL +KGK+IVTKDEIRK
Sbjct: 1 MIRVIEKGDKVSLPFSRGILTRSITSVGIDVDLAYSIAIEVQEELVKKGKTIVTKDEIRK 60
Query: 61 LTYQKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVI 120
LTYQKL+EKGFKEEAKRY+FWRRFRKMKVPL+ILLGGPTGVGKSTIATELAFRLGIRSVI
Sbjct: 61 LTYQKLIEKGFKEEAKRYIFWRRFRKMKVPLIILLGGPTGVGKSTIATELAFRLGIRSVI 120
Query: 121 GTDSIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAII 180
GTDSIREVLRK+ITPELLPTIHTSTFLAWKE+KGT + SPI+AGFESQVSAV VG+NAII
Sbjct: 121 GTDSIREVLRKIITPELLPTIHTSTFLAWKELKGTVTDSPIVAGFESQVSAVTVGINAII 180
Query: 181 ERAKREGLNAIIEGIHVVPGFVDVKGEMTFMYMIVARSREDLEARFYERTRYSKRSANYY 240
ERA REGLNAIIEGIHVVPGFV V+GEMTFMYM++ARSREDLEARFYERTRYSKR A+YY
Sbjct: 181 ERAVREGLNAIIEGIHVVPGFVKVEGEMTFMYMLIARSREDLEARFYERTRYSKRPADYY 240
Query: 241 ISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGLDMLEE 300
ISHLDEI+EIQ YLI RA+KF VPVIEN+ELE+T+ IMEDIM++TIE MK KGLD+LEE
Sbjct: 241 ISHLDEILEIQDYLIRRAKKFNVPVIENVELEETVSKIMEDIMQKTIEIMKGKGLDLLEE 300
Query: 301 P 301
P
Sbjct: 301 P 301
>pir||A64485 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanococcus jannaschii
>gi|1592120|gb|AAB99494.1| (U67589) 2-phosphoglycerate
kinase (2pgk) [Methanococcus jannaschii]
Length = 309
Score = 225 bits (567), Expect = 6e-58
Identities = 122/303 (40%), Positives = 185/303 (60%), Gaps = 8/303 (2%)
Query: 4 VVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRKLTY 63
++ +G +PFS+GIL RS+T+ G+ +AY IA ++ E L ++ ++ K ++R+ Y
Sbjct: 7 IIVRGKSYEMPFSKGILARSLTAAGLKPSIAYRIAWDIYEMLKKENIRVIDKADLRRRVY 66
Query: 64 QKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTD 123
L+ K + E AK+YL WR + P++IL+GG +GVG STIA E+A RLGI SVIGTD
Sbjct: 67 YYLISKNYDEVAKKYLLWRMVLGRR-PIVILIGGASGVGTSTIAFEIASRLGIPSVIGTD 125
Query: 124 SIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAIIERA 183
SIREV+RKVI+ +L+PT++ S++ AWK ++ G+ I GFE AV GV +I+R
Sbjct: 126 SIREVMRKVISRDLIPTLYESSYTAWKVLR-DDEGNKYIKGFERHSEAVLTGVEGVIDRC 184
Query: 184 KREGLNAIIEGIHVVPGFVD---VKGEMTFMYMIVARSREDLEARFYERTRYSKRSANYY 240
EG + IIEG H+VP + ++ M+ + E + RFY R R S R Y
Sbjct: 185 LVEGQSVIIEGTHLVPTLLKDKYLENSHVVFIMLTIYNEELHKMRFYARGRVSSRPTERY 244
Query: 241 ISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGL---DM 297
+ + I I Y++E A+K G+PV+ENI++ +T+ + I ER ++ +GL DM
Sbjct: 245 LKYFKIIRMINDYMVETAKKKGIPVVENIKISETVDKCLNIITERLKTMIELEGLSEEDM 304
Query: 298 LEE 300
LEE
Sbjct: 305 LEE 307
>gb|AAC25559.1| (AF013169) 2-phosphoglycerate kinase [Pyrococcus furiosus]
Length = 135
Score = 222 bits (561), Expect = 3e-57
Identities = 108/135 (80%), Positives = 124/135 (91%)
Query: 168 QVSAVAVGVNAIIERAKREGLNAIIEGIHVVPGFVDVKGEMTFMYMIVARSREDLEARFY 227
QV+AVAVGVNA+I+RA +EGLNAIIEGIH+VPGF+ + EM FMYMIVARSRE+LEARFY
Sbjct: 1 QVNAVAVGVNAVIQRAIKEGLNAIIEGIHLVPGFIKIDYEMAFMYMIVARSREELEARFY 60
Query: 228 ERTRYSKRSANYYISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTI 287
ERTRYSKRSA YYISHLDEIMEIQ YLI++AR++ VP+IEN+ELEKTI IMEDIME+T+
Sbjct: 61 ERTRYSKRSAQYYISHLDEIMEIQEYLIKKAREYRVPIIENVELEKTISTIMEDIMEKTV 120
Query: 288 EAMKKKGLDMLEEPK 302
E MKKKGLDMLEEPK
Sbjct: 121 EIMKKKGLDMLEEPK 135
>pir||S41582 2-phosphoglycerate kinase - Methanothermus fervidus
>gi|467751|emb|CAA50058.1| (X70785) 2-phosphoglycerate
kinase [Methanothermus fervidus]
Length = 304
Score = 217 bits (546), Expect = 2e-55
Identities = 115/278 (41%), Positives = 178/278 (63%), Gaps = 8/278 (2%)
Query: 14 PFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRKLTYQKLVEKGFKE 73
PFS+G+L RS+T G+D AY +A EV+ L ++ K IVT DE+ K+ Y KL EK K
Sbjct: 16 PFSKGVLARSLTRSGMDPTDAYLLAAEVESYLKKEKKKIVTIDELVKIVYNKLKEKDEKI 75
Query: 74 EAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVI 133
A++Y+ WR+ R+ K PL++L+ G +GVG S+IA E+A RLGIR++I TD IREV+RK+I
Sbjct: 76 -AEKYIRWRKIREYKEPLILLIAGASGVGTSSIAFEVANRLGIRNMISTDMIREVMRKMI 134
Query: 134 TPELLPTIHTSTFLAWKEIK--GTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAI 191
+ EL+P++H STF A+K ++ ++ GF V+ V VG+ A+IERA EG++ +
Sbjct: 135 SKELIPSLHESTFTAYKSLRTPAPVEFDEVLVGFRDHVNVVTVGIEAVIERALTEGISIV 194
Query: 192 IEGIHVVPGFVD---VKGEMTFMYMIVARSREDLEARFYERTR--YSKRSANYYISHLDE 246
IEG H+VPGF+ + M+++ + +RFY R R +++R Y+ +
Sbjct: 195 IEGAHLVPGFIREELINKNNVAMFVLTVPDEKMHRSRFYSRCRQKWARRPLERYLKYFWA 254
Query: 247 IMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIME 284
I I Y+ +ARK +P+IENI++ TI +I++ + E
Sbjct: 255 IRRIHDYIEMQARKHNIPIIENIDVVTTIDSIVKSLTE 292
>pir||A69119 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623021|gb|AAB86349.1| (AE000940) 2-phosphoglycerate
kinase [Methanobacterium thermoautotrophicum]
Length = 306
Score = 215 bits (542), Expect = 5e-55
Identities = 114/299 (38%), Positives = 188/299 (62%), Gaps = 8/299 (2%)
Query: 1 MIRVVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRK 60
M++ G PFS+G+L RS+T +D + AY+ A ++ L + ++T +E+ +
Sbjct: 3 MVQGEVSGKKYTEPFSKGVLARSLTRAEMDPNRAYTFASRIEAHLKKNKVDLITIEELVE 62
Query: 61 LTYQKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVI 120
+ + L K E A++Y+ WR+ R+ K PL+IL+GG +GVG S+IA E+A RLGIR++I
Sbjct: 63 IVSEHL-RKEDPEVAEKYMLWRKIRQCKEPLIILIGGASGVGTSSIAFEVANRLGIRNMI 121
Query: 121 GTDSIREVLRKVITPELLPTIHTSTFLAWKEIK--GTTSGSPIIAGFESQVSAVAVGVNA 178
TD IREV+RK+++ ELLP+I+ S++ A++ ++ ++ GF V +V++GV A
Sbjct: 122 STDMIREVMRKIVSRELLPSIYESSYTAYQSLRIPPPPELDEVLIGFRDHVESVSIGVEA 181
Query: 179 IIERAKREGLNAIIEGIHVVPGFVD---VKGEMTFMYMIVARSREDLEARFYERTR--YS 233
+IERA EG++ +IEG+H+VPGF+ V E M+++ + RFY R R ++
Sbjct: 182 VIERALTEGISIVIEGVHIVPGFIREDLVNKENVAMFVLTVSDENVHKGRFYSRCRQMWA 241
Query: 234 KRSANYYISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKK 292
+R YIS+ I I RY+ +ARK GVPVIENI++ TI +I++ + + T++ +K
Sbjct: 242 RRPLKRYISYFWAIRRIHRYIENQARKHGVPVIENIDVVTTIDSIIKSLTKTTVKGGEK 300
>pir||G75386 probable 2-phosphoglycerate kinase - Deinococcus radiodurans
(strain R1) >gi|6459277|gb|AAF11081.1|AE001995_6
(AE001995) 2-phosphoglycerate kinase, putative
[Deinococcus radiodurans]
Length = 540
Score = 171 bits (428), Expect = 1e-41
Identities = 94/299 (31%), Positives = 170/299 (56%), Gaps = 12/299 (4%)
Query: 4 VVEKGSDVALPFSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRKLTY 63
V+ + + PFS+G+L +S+ + G+ D+A +A Q +L +V + +IR+
Sbjct: 223 VISEEDGMPAPFSKGLLVQSLLAAGVAPDVARKVARVTQRDLRGSDDRLVRRAQIREKVE 282
Query: 64 QKLVEKGFKEEAKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTD 123
L ++ + + RY R R PL++LLGG +G GKS +A E+A+RLGI V TD
Sbjct: 283 ALLRDEVGPDVSARYRLLRVIRTPPRPLIVLLGGVSGTGKSLLAAEIAYRLGISRVASTD 342
Query: 124 SIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSP-------IIAGFESQVSAVAVGV 176
SIREV+R +++P LLPT+H STF AW+ + P ++AGF QV V+VG+
Sbjct: 343 SIREVMRAMVSPALLPTLHASTFNAWEALVPPGQTRPAHPTREELLAGFRDQVQQVSVGL 402
Query: 177 NAIIERAKREGLNAIIEGIHVVPGFVD---VKGEMTFMYMIVARSREDLEARFYER--TR 231
+A++ R+ +EG + ++EG+H+VPG+++ +G + ++ E+ F R
Sbjct: 403 SAVVRRSIQEGTSLVLEGVHLVPGYIEPAAFQGALLVPMLVGLPDEEEHRRHFESRDTET 462
Query: 232 YSKRSANYYISHLDEIMEIQRYLIERARKFGVPVIENIELEKTIRAIMEDIMERTIEAM 290
+ R + Y+ + +EI +Q L AR++ VP++++ L+++ +E ++ + + A+
Sbjct: 463 AASRPLHRYMRYFEEIRTMQDELKRLARQYDVPMLDSETLDESADRAVELVLRQVMVAL 521
>pir||D69112 2-phosphoglycerate kinase (EC 2.7.2.-) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622969|gb|AAB86301.1| (AE000936) 2-phosphoglycerate
kinase homolog [Methanobacterium thermoautotrophicum]
Length = 321
Score = 131 bits (327), Expect = 8e-30
Identities = 79/221 (35%), Positives = 128/221 (57%), Gaps = 10/221 (4%)
Query: 87 MKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVITPELLPTIHTSTF 146
M+ P +IL+G +G+GKST+A+ELA L I+ +I TD IRE++R +I P+ PT+H S+F
Sbjct: 1 MRKPYVILIGSASGIGKSTVASELARELSIKHLIETDFIREIVRGIIGPDYAPTLHRSSF 60
Query: 147 LAW-----KEI-KGTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAIIEGIHVVPG 200
A+ KE+ +G + S I AGFE S V + +IERA + + +IEG+H++PG
Sbjct: 61 DAYTALRDKELFQGNSIESLICAGFEDHASFVIPAIEKVIERAVTDSDDVVIEGVHLLPG 120
Query: 201 FVDVK--GEMTFMYMIVARSREDL-EARFYERTRYSKRSANYYISHLDEIMEIQRYLIER 257
++ + E ++ V + E++ + RF +R KR ++ + E I YL+
Sbjct: 121 LINTEKFSENASIHFFVLAAEENVHKERFVKRAMEIKRGGK-HLEYFRENRVIHDYLVRN 179
Query: 258 ARKFGVPVIENIELEKTIRAIMEDIMERTIEAMKKKGLDML 298
AR+ GVPVI N ++ TIR ++ I E E + ++ L
Sbjct: 180 AREHGVPVINNDDINCTIRRMLSFIRENCTEVTLQHPVERL 220
>dbj|BAB10444.1| (AB016887) contains similarity to ATP/GTP nucleotide-binding
protein~gene_id:MCI2.1 [Arabidopsis thaliana]
Length = 447
Score = 78.8 bits (191), Expect = 7e-14
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 16 SRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRKLTYQKLVEKGFKEE- 74
SR ++ R +T I A I++E+++ L V++ ++ ++ + +G+ EE
Sbjct: 72 SRFLVCRMLTVTKIPNHEAIKISLELKKLLIDNSLLDVSQSDLETNLFKLMERRGYGEEY 131
Query: 75 AKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVIT 134
RY +F +VPL+IL+ G VGKSTIAT+LA RL + +V+ TD + E+LR
Sbjct: 132 INRYNMMTKFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTATD 191
Query: 135 PELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAIIEG 194
L TST + +E S +I F + V G+ +++A ++G IIEG
Sbjct: 192 APL-----TSTPVWTREF---GSSEELITEFCRECRIVRKGLGGDLKKAMKDGKPIIIEG 243
Query: 195 IHVVP 199
H+ P
Sbjct: 244 RHLDP 248
>emb|CAC11895.1| (AL445065) 2-phosphoglycerate kinase related protein [Thermoplasma
acidophilum]
Length = 202
Score = 73.4 bits (177), Expect = 3e-12
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 92 LILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVITPELLPTIHTSTFLAWKE 151
++ +GG GVGK++I+ +A I V+ +D +RE LR E + TS + AWK
Sbjct: 5 IMFIGGVPGVGKTSISGYIARNTDIDIVLSSDYLREFLRPFAPQE--SHLETSVYDAWK- 61
Query: 152 IKGTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAIIEGIHVVPGFVD-VKGEMTF 210
G S II G+ Q + G+N +I RA G + IIE ++ VP +D + + F
Sbjct: 62 FYGDMSDDNIIRGYLDQARPIMGGINRVIARALANGEDLIIESLYFVPDMMDEMVLKNAF 121
Query: 211 MYMIVARSREDLEARFYERTRYSKRSA--NYYISHLDEIMEIQRYLIERARKFGVPVIEN 268
+ + + +R +R Y+ R++ + +HL E I Y ++ AR G+ +
Sbjct: 122 LAYVYIDDPDLHRSRLEDRINYTHRNSPGSRLAAHLKEYRTIMDYSMDMARGRGIGLYST 181
Query: 269 IELEKTIRAIMED 281
+ + +++D
Sbjct: 182 DDYALARQRLLDD 194
>emb|CAB71280.1| (AL138618) hypothetical protein L2954.08 [Leishmania major]
Length = 620
Score = 72.6 bits (175), Expect = 5e-12
Identities = 56/228 (24%), Positives = 110/228 (47%), Gaps = 33/228 (14%)
Query: 88 KVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVIT--PELLPTIHTST 145
++P++I +GG +G GKST+A+ +A +L + +V+ TD++R+VLR + P + ST
Sbjct: 196 RMPVVIFVGGASGAGKSTLASLVASQLRVPNVLSTDTVRQVLRARLCGHEAQFPALFVST 255
Query: 146 FLAWKEIKGTTSGS----------------PIIAGFESQVSAVAVGVNAIIER--AKREG 187
+ A K + S I+ G+E+Q V ++ ++ R A+RE
Sbjct: 256 YEAHKVTADDSHASADDGSAVPHAQSADENAIVQGYEAQCELVLRVLDGMLARLLARRES 315
Query: 188 LNAIIEGIHVVPGFVDVKGEMTFMYMI--------VARSREDLEARFYERTRYSKRSA-N 238
+ ++EG+H++P ++ K + + + ++ LE S R+ N
Sbjct: 316 I--VVEGVHLLPRYLAAKRAELLVSRVACVPVLVRIPKADSHLERLCIRARGMSMRAQNN 373
Query: 239 YYISHLDEIMEIQRYLIERARKFGVP--VIENIELEKTIRAIMEDIME 284
YI+ I IQ +L++ +P V+ N ++K+ A+ ++E
Sbjct: 374 KYIASFKAIRAIQAHLVDSVEAASLPVLVLSNTNMDKSFTALHHTLLE 421
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.138 0.378
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99075882
Number of Sequences: 2977
Number of extensions: 3989199
Number of successful extensions: 18035
Number of sequences better than 1.0e-10: 11
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 18007
Number of HSP's gapped (non-prelim): 14
length of query: 302
length of database: 189,106,746
effective HSP length: 59
effective length of query: 243
effective length of database: 153,796,013
effective search space: 37372431159
effective search space used: 37372431159
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)