BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2269 (PAB2269) DE:Hypothetical protein
(210 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75199 hypothetical protein PAB2269 - Pyrococcus abyssi (st... 433 e-121
pir||F71232 hypothetical protein PH0120 - Pyrococcus horikoshii ... 405 e-112
pir||T43935 conserved hypothetical protein [imported] - Pyrococc... 368 e-101
pir||F72712 hypothetical protein APE1117 - Aeropyrum pernix (str... 102 3e-21
emb|CAC11897.1| (AL445065) conserved hypothetical protein [Therm... 97 2e-19
pir||H72287 conserved hypothetical protein - Thermotoga maritima... 92 6e-18
pir||G71047 hypothetical protein PH1671 - Pyrococcus horikoshii ... 91 8e-18
gi|11498864 conserved hypothetical protein [Archaeoglobus fulgid... 91 8e-18
gi|11499736 conserved hypothetical protein [Archaeoglobus fulgid... 90 2e-17
pir||G75167 hypothetical protein PAB0339 - Pyrococcus abyssi (st... 90 2e-17
dbj|BAB06897.1| (AP001518) unknown conserved protein [Bacillus h... 89 4e-17
pir||B64445 hypothetical protein MJ1163 - Methanococcus jannasch... 85 5e-16
pir||T35217 hypothetical protein SC5C7.10c SC5C7.10c - Streptomy... 76 3e-13
gb|AAG19448.1| (AE005038) Vng1038c [Halobacterium sp. NRC-1] 75 9e-13
pir||A69121 conserved hypothetical protein MTH1902 - Methanobact... 74 2e-12
dbj|BAB06835.1| (AP001517) unknown conserved protein in others [... 69 3e-11
>pir||D75199 hypothetical protein PAB2269 - Pyrococcus abyssi (strain Orsay)
>gi|5457552|emb|CAB49043.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 210
Score = 433 bits (1102), Expect = e-121
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND 60
MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND
Sbjct: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND 60
Query: 61 AEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLGYLIIGDKR 120
AEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLGYLIIGDKR
Sbjct: 61 AEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLGYLIIGDKR 120
Query: 121 VAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPMHYGTYGG 180
VAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPMHYGTYGG
Sbjct: 121 VAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPMHYGTYGG 180
Query: 181 GSAEGFKRELQRRRVWVLVKDLKPYEGFEV 210
GSAEGFKRELQRRRVWVLVKDLKPYEGFEV
Sbjct: 181 GSAEGFKRELQRRRVWVLVKDLKPYEGFEV 210
>pir||F71232 hypothetical protein PH0120 - Pyrococcus horikoshii
>gi|3256506|dbj|BAA29189.1| (AP000001) 211aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 211
Score = 405 bits (1030), Expect = e-112
Identities = 194/211 (91%), Positives = 201/211 (94%), Gaps = 1/211 (0%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND 60
MKIVWYGHACFL+KTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND
Sbjct: 1 MKIVWYGHACFLVKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND 60
Query: 61 AEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLGYLIIGDKR 120
AEVIGPKTVYLMAISDGLTKVRE+EA QE QLGDVTVK FYTEHPTSQYPLGYLI+G+KR
Sbjct: 61 AEVIGPKTVYLMAISDGLTKVREVEADQEFQLGDVTVKTFYTEHPTSQYPLGYLILGEKR 120
Query: 121 VAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPMHYGTYGG 180
VAHLGDTYYSP F+ LRGQVDILLVPIGGRSTASEREAVDI+DIIRPRI VPMHYGTYG
Sbjct: 121 VAHLGDTYYSPGFRELRGQVDILLVPIGGRSTASEREAVDIIDIIRPRIVVPMHYGTYGS 180
Query: 181 -GSAEGFKRELQRRRVWVLVKDLKPYEGFEV 210
G+ E FKRELQRRRVWVLVKDLKPYEGFEV
Sbjct: 181 TGNVESFKRELQRRRVWVLVKDLKPYEGFEV 211
>pir||T43935 conserved hypothetical protein [imported] - Pyrococcus furiosus
>gi|2967438|dbj|BAA25165.1| (D84670) ORF4 [Pyrococcus
furiosus]
Length = 210
Score = 368 bits (934), Expect = e-101
Identities = 171/210 (81%), Positives = 191/210 (90%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLND 60
MKIVW GHACFL++ +G ILIDPYPDVDEDR+ KVDYIL+THEHMDHYGKTPLIAKL+D
Sbjct: 1 MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSD 60
Query: 61 AEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLGYLIIGDKR 120
AEVIGPKTVYLMAISDGLTKVREIE GQEI+LGD+ V+AF+TEHPTSQYPLGYLI G KR
Sbjct: 61 AEVIGPKTVYLMAISDGLTKVREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKR 120
Query: 121 VAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPMHYGTYGG 180
VAHLGDTYYSP+F LRG+VD+LLVPIGG+STAS REA DIV++IRPRIAVPMHYGTY
Sbjct: 121 VAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAADIVEMIRPRIAVPMHYGTYSE 180
Query: 181 GSAEGFKRELQRRRVWVLVKDLKPYEGFEV 210
E FK+ELQ+RR+WVLVKDLKPYEGFE+
Sbjct: 181 ADPEEFKKELQKRRIWVLVKDLKPYEGFEI 210
>pir||F72712 hypothetical protein APE1117 - Aeropyrum pernix (strain K1)
>gi|5104787|dbj|BAA80102.1| (AP000060) 242aa long
hypothetical protein [Aeropyrum pernix]
Length = 242
Score = 102 bits (253), Expect = 3e-21
Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 28/235 (11%)
Query: 2 KIVWYGHACFLIKTKGVSILIDPY-----PDVDEDRMEKVDYILITHEHMDHYGKTPLIA 56
++ + GHA F ++ G IL+DP+ V + +E VD I+ITH H DH G IA
Sbjct: 3 RLTYLGHAAFQLEAGGRKILVDPWLSNPKSPVKPEEVEGVDLIVITHSHFDHLGDVGKIA 62
Query: 57 KLND-AEVIGPKTVYLMAISD-----GLTKVREIEAGQEIQ--------LGDVTVKAFYT 102
N A+V+ V +A + G +K AG+ I L D+ +K +T
Sbjct: 63 AKNPGAKVLAVYEVADLAAEEIAKETGASKDELFNAGRVIGANIGGPVVLQDLGLKVAFT 122
Query: 103 E--HPTSQYPLGYLII-GDKRVAHLGDTYYSPSFKNLRGQV---DILLVPIGGRSTASER 156
H + G +II G+ RV H GDT + + L G++ + L+PIGG T
Sbjct: 123 PATHSSVGVAAGAVIITGEGRVYHAGDTGVTMDMR-LVGEIYKPHVALLPIGGHFTMDPV 181
Query: 157 EAVDIVDIIRPRIAVPMHYGTYG--GGSAEGFKRELQRRRVWVLVKDLKPYEGFE 209
EA V++IRP +A+PMHYGT+ G E FK+ ++ + + V+ LKP E +E
Sbjct: 182 EAAKAVELIRPLVAIPMHYGTFPVLYGDPEEFKKRVEEKCLPTQVRILKPGESYE 236
>emb|CAC11897.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 259
Score = 96.7 bits (237), Expect = 2e-19
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 28/227 (12%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKV-------DYILITHEHMDHYGKTP 53
+KI+W+GHACF + K +L+DP+ + ++ + KV D IL+TH H DH
Sbjct: 39 LKIIWHGHACFSLIGKK-HVLVDPF--LTDNPVAKVKPEELKPDLILVTHGHSDHCEDAS 95
Query: 54 LIAKLNDAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQY---- 109
I+K A V+ + + +G T+ +I G I+ + VKA H +S
Sbjct: 96 KISKNTHAPVVAAFELSEILKEEG-TETIDINPGGTIEYEGIRVKATIATHSSSYNGRYA 154
Query: 110 --PLGYLIIGDKRVAHLGDTYYSPSFKNLRG-----QVDILLVPIGGRSTASEREAVDIV 162
P+G++I +++ H GDT Y FK++ + DI L+PIGG T A + V
Sbjct: 155 GNPMGFVIDMGRKIYHAGDTGY---FKDMEAIGAMDRPDIALLPIGGHYTMDVDGAFEAV 211
Query: 163 DIIRPRIAVPMHYGTYG--GGSAEGFKRELQRRRVWVLVKDL-KPYE 206
I+P IA+PMHY T+ E FK +V++ ++ KP E
Sbjct: 212 KAIKPAIAIPMHYNTFDLIRADPERFKALAGTVGTYVIIPEIEKPIE 258
>pir||H72287 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981711|gb|AAD36238.1|AE001773_7 (AE001773)
conserved hypothetical protein [Thermotoga maritima]
Length = 226
Score = 91.7 bits (224), Expect = 6e-18
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 38/237 (16%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPD------VDEDRMEKVDYILITHEHMDHYGKTPL 54
MK+ + GHA LI+ K +I+IDP+ V + + K+DYIL+TH H DH G
Sbjct: 1 MKVTFLGHAVVLIEGKK-NIIIDPFISGNPVCPVKLEGLPKIDYILVTHGHGDHLGDAVE 59
Query: 55 IAKLNDAEVI---------GPKTVYLMAI--------SDGLTKVREIEAGQEIQLGDVTV 97
IAK NDA VI G K V A+ G K+ G I GD +
Sbjct: 60 IAKKNDATVISNYEICHYLGKKGVKTHAMHIGGSYLFDFGRVKMTPAVHGSGILDGDSMI 119
Query: 98 KAFYTEHPTSQYPLGYLI-IGDKRVAHLGDTYYSPSFKNLRGQ-VDILLVPIGGRSTASE 155
Y +P+ G+LI I K++ H GDT + + L + VD+ +PIGG
Sbjct: 120 ---YGGNPS-----GFLITIEGKKIYHAGDTGLTREMELLAEENVDVAFLPIGGNFVMDV 171
Query: 156 REAVDIVDIIRPRIAVPMHYGTYG--GGSAEGFKRELQRRRVWVLVKDLKPYEGFEV 210
+AV +I+P+ VPMHYGT+ E FK++++ + V ++ L+P E E+
Sbjct: 172 EDAVRAAVMIKPKKVVPMHYGTWELIFADVELFKKKVEEKGVECVI--LEPGESLEL 226
>pir||G71047 hypothetical protein PH1671 - Pyrococcus horikoshii
>gi|3258100|dbj|BAA30783.1| (AP000006) 236aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 236
Score = 91.3 bits (223), Expect = 8e-18
Identities = 72/221 (32%), Positives = 109/221 (48%), Gaps = 25/221 (11%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPY------PDVDEDRMEKVDYILITHEHMDHYGKTPL 54
+K+ + GHA F I+ ILIDP+ + + VD IL+TH H DH G
Sbjct: 13 VKVKFLGHAAFYIEGSK-KILIDPFLTGNPQAAARPEDFKDVDLILVTHAHGDHLGDAGE 71
Query: 55 IAKLNDAEVIGPKTVYLMA--ISDGLTKVREIEAGQ-EIQLGDVTVKAFYTEHPTSQ--- 108
IA+++ A+++ +Y +A IS+ V I ++ V + H +S
Sbjct: 72 IARISGAKIVA---MYDLANYISEKYKDVETIGMNYGPTEIDGVFIVQVPAWHSSSDGKY 128
Query: 109 ---YPLGYLI-IGDKRVAHLGDTYYSPS---FKNLRGQVDILLVPIGGRSTASEREAVDI 161
P GY++ + D + H GDTY F L G +D+ L+PIGG T REA
Sbjct: 129 SIGNPSGYIVKLDDVTIYHAGDTYVFKDMELFAELYGPIDVALLPIGGHFTMGVREAAKA 188
Query: 162 VDIIRPRIAVPMHYGTYGGGSA--EGFKRELQRRRVWVLVK 200
V++++PR VPMHY T+ SA E FKR + + V++K
Sbjct: 189 VELLKPRKVVPMHYNTWPPISADPEEFKRLVGDKAEVVILK 229
>gi|11498864 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7449929|pir||H69407 conserved hypothetical protein
AF1265 - Archaeoglobus fulgidus
>gi|2649315|gb|AAB89979.1| (AE001017) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 231
Score = 91.3 bits (223), Expect = 8e-18
Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 25/231 (10%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPY----PDVDEDRME-KVDYILITHEHMDHYGKTPLI 55
MKI W GHA FL++ + +LIDP+ P+ E K DYIL+TH H DH G I
Sbjct: 1 MKITWLGHAAFLLEGS-MKVLIDPFLTGNPNAPVKPEEVKADYILVTHGHGDHLGDAVEI 59
Query: 56 AKLNDAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHP---------- 105
AK N+A +I + + +S + + G + G + V H
Sbjct: 60 AKRNNAPIICIHELSRI-LSRYDVETMGMNMGGTARTGSIAVTMVPAWHSADLEDEQGNI 118
Query: 106 -TSQYPLGYLIIGDK-RVAHLGDTYYSPSFKNLRGQV---DILLVPIGGRSTASEREAVD 160
++ P G+++ D RV H GDT + L G++ D++L+PIG T AV
Sbjct: 119 ISAGLPAGFIVSMDGVRVYHTGDTDVFLDMQ-LIGELHRPDVMLLPIGDYYTMGIAGAVK 177
Query: 161 IVDIIRPRIAVPMHYGTYG--GGSAEGFKRELQRRRVWVLVKDLKPYEGFE 209
+++++P++A+PMHY T+ E F++ ++ + + V V LKP E +E
Sbjct: 178 ALELVKPKVAIPMHYNTFPLVEKDPEDFRKAVKAKGLDVEVVILKPGESYE 228
>gi|11499736 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7449933|pir||A69519 conserved hypothetical protein
AF2153 - Archaeoglobus fulgidus
>gi|2648361|gb|AAB89087.1| (AE000955) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 208
Score = 90.1 bits (220), Expect = 2e-17
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 20/200 (10%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLN- 59
++I W HA F IK V + IDPY D+ E+ +EK D IL+TH+H DH I KL+
Sbjct: 11 VEITWLKHAGFRIKGSRV-VYIDPY-DIPEE-LEKADVILVTHDHFDHMD-VKSIRKLSK 66
Query: 60 -DAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKA---FYTEHPT-SQYPLGYL 114
D V+ P I +G E+ G E ++ V +KA + + P + +GY+
Sbjct: 67 DDTVVVHPSG----CIIEGFESC-EVGVGTEAEVKGVKIKAVPAYNVDKPFHKENCVGYI 121
Query: 115 I-IGDKRVAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASEREAVDIVDIIRPRIAVPM 173
+ I ++ H GDT P K + +VDI L+P+GG T + +EA++ IR + +PM
Sbjct: 122 VGIDGVKIYHAGDTDRIPEMKEI--EVDIALLPVGGTYTMNLQEAIEAAKDIRAKYYIPM 179
Query: 174 HYGTYGGGSA--EGFKRELQ 191
H+G SA E FKR+++
Sbjct: 180 HFGAIPQTSADPEEFKRKVK 199
>pir||G75167 hypothetical protein PAB0339 - Pyrococcus abyssi (strain Orsay)
>gi|5457932|emb|CAB49422.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 225
Score = 89.7 bits (219), Expect = 2e-17
Identities = 70/228 (30%), Positives = 108/228 (46%), Gaps = 22/228 (9%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPDVDEDRMEK------VDYILITHEHMDHYGKTPL 54
+K+ + GHA F I+ ILIDP+ + + K VD IL+TH H DH G
Sbjct: 2 VKVKFLGHAAFYIEGSK-KILIDPFLTGNPQAVAKPEDFKDVDLILVTHAHGDHIGDAGE 60
Query: 55 IAKLNDAEVIGPKTV--YLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPLG 112
IAK++ A+++ + Y+ G+ V E+ + + +Y +G
Sbjct: 61 IAKISGAKIVAMYDIANYIAEKFKGVETVGMNYGPTEVDGVFIVQVPAWHSSSDGKYSIG 120
Query: 113 -----YLIIGDKRVAHLGDTYYSPS---FKNLRGQVDILLVPIGGRSTASEREAVDIVDI 164
+ + K + H GDTY F L G +D+ L+PIGG T +EA V++
Sbjct: 121 NASGFIVKLDGKTIYHAGDTYVFKDMELFSELYGPIDVALLPIGGHFTMGVKEAAKAVEL 180
Query: 165 IRPRIAVPMHYGTYGGGSA--EGFKRELQRRRVWVLVKDLKPYEGFEV 210
++PR VPMHY T+ SA E FK+ + + V+ LKP E E+
Sbjct: 181 LKPRTVVPMHYNTWPPISADPEEFKKLVGDKAKVVV---LKPGEELEL 225
>dbj|BAB06897.1| (AP001518) unknown conserved protein [Bacillus halodurans]
Length = 226
Score = 88.9 bits (217), Expect = 4e-17
Identities = 64/198 (32%), Positives = 99/198 (49%), Gaps = 22/198 (11%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPY------PDVDEDRMEKVDYILITHEHMDHYGKTPL 54
MK+ ++GH+ I+T+G +I+IDP+ D+ D + KVD IL+TH H DH G T
Sbjct: 1 MKVSYHGHSVVKIETEGKTIVIDPFITGNGLTDLSVDDL-KVDVILLTHGHNDHVGDTLQ 59
Query: 55 IAKLNDAEVIGPKTVYLMAISDGLTKVREIEAG--QEIQLGDVTV------KAFYTEHPT 106
+AK NDA VI P + G+ KV E+ G + + G V + ++ E+ T
Sbjct: 60 LAKQNDALVIAPFELATYLSWKGV-KVHEMHIGGAHQFEFGHVKLTQAFHGSSYTEENQT 118
Query: 107 SQY---PLGYLIIGD-KRVAHLGDTYYSPSFKNL--RGQVDILLVPIGGRSTASEREAVD 160
Y P G L + K + H GDT K + R +D+ +PIG T +A
Sbjct: 119 IVYTGMPSGILFTAEGKTIFHAGDTALFSDMKLIGERNTIDVAFLPIGDNFTMGPEDAAV 178
Query: 161 IVDIIRPRIAVPMHYGTY 178
+ ++ + VP+HY T+
Sbjct: 179 AAEWLQAKTVVPIHYNTF 196
>pir||B64445 hypothetical protein MJ1163 - Methanococcus jannaschii
>gi|1591789|gb|AAB99165.1| (U67558) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 217
Score = 85.4 bits (208), Expect = 5e-16
Identities = 61/192 (31%), Positives = 93/192 (47%), Gaps = 24/192 (12%)
Query: 3 IVWYGHACFLIKTKGVSILIDPY---PDVD---EDRMEKVDYILITHEHMDHYGKTPLIA 56
I WYGHACF + ++LIDP+ P D ++ ME V+ I +TH H DH G +A
Sbjct: 2 ITWYGHACFKVD----NVLIDPFVPNPLCDLPYDEIMEGVEVIAVTHGHADHLGNAEELA 57
Query: 57 KLNDAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQYPL----- 111
K + V+ + + G+ + G I++ + EH + P
Sbjct: 58 KTYNVPVVTNHEISVYLSERGVC-AEGMNIGGTIEINGAKLTMVKAEHSSDISPTISGGV 116
Query: 112 --GYLIIGDKRVAHLGDTYYSPSFKNLRGQV---DILLVPIGGRSTASEREAVDIVDIIR 166
G++I + RV H GDT + L G++ I L+PIGGR T EA+ +++I
Sbjct: 117 AAGFII--NDRVYHAGDTGLFGDME-LIGEIYAPQIALLPIGGRYTMGIDEALVAIELIY 173
Query: 167 PRIAVPMHYGTY 178
P I +PMHY T+
Sbjct: 174 PEIVIPMHYNTF 185
>pir||T35217 hypothetical protein SC5C7.10c SC5C7.10c - Streptomyces coelicolor
>gi|3560000|emb|CAA20622.1| (AL031515) hypothetical
protein SC5C7.10c [Streptomyces coelicolor A3(2)]
Length = 255
Score = 76.1 bits (184), Expect = 3e-13
Identities = 56/208 (26%), Positives = 88/208 (41%), Gaps = 31/208 (14%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPY------------PDVDEDRMEKVDYILITHEHMDH 48
M++ W+GHA ++ G+ +L DP V + D L++H H DH
Sbjct: 1 MELTWWGHATCTVEDSGIRVLTDPLFVRRLAHLRRRRGAVPPPEAWRADVALVSHLHADH 60
Query: 49 YGKTPLIAKLNDAEVI----GPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEH 104
P +A+L + G + G ++ E+ G E +GD+ ++A H
Sbjct: 61 L-HVPSLARLAPGTRLLVPRGARRAVPGLRRLGHLELTEVVPGDETTVGDLRIRAVPARH 119
Query: 105 PTSQYP--------LGYLIIGDKRVAHLGDTYYSPSFKNLRGQVDILLVPIGGRSTASER 156
+ P LGY++ G+ R GDT + G VD L+P+GG
Sbjct: 120 DGRRLPVGRHRAPALGYVVEGEARTYFAGDTGLFDGMEQEVGPVDAALLPVGGWGPYLGA 179
Query: 157 E------AVDIVDIIRPRIAVPMHYGTY 178
E A + + + PR AVP+HYGTY
Sbjct: 180 EHLDAGRAAEALARLAPRTAVPVHYGTY 207
>gb|AAG19448.1| (AE005038) Vng1038c [Halobacterium sp. NRC-1]
Length = 240
Score = 74.5 bits (180), Expect = 9e-13
Identities = 57/205 (27%), Positives = 87/205 (41%), Gaps = 30/205 (14%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPY---PDVDEDRME-KVDYILITHEHMDHYGKTPLIA 56
M++ W+GH+ + + +L+DP+ P D E VD++L+TH H DH A
Sbjct: 1 MELTWFGHSTWRVTVGTTDLLVDPFFDNPHTDTAPSEVAVDHVLLTHGHADHIAHVGAFA 60
Query: 57 KLNDAEVIG-PKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTS-----QY- 109
D +G P+ +A G+ + G ++LGD V +H +Y
Sbjct: 61 ---DTHTVGTPEVTGYVADETGVEDTTGMNLGGTVELGDAFVTMVRADHTNGLETGYEYS 117
Query: 110 ---PLGYLI-------IGDKRVA---HLGDTYYSPSFKNLRGQV---DILLVPIGGRSTA 153
P+GY+I GD H GDT K++ G D VP+G T
Sbjct: 118 GGTPVGYVISDAAPTQTGDGDATTFYHAGDTSLQSEMKDVIGPYLDPDAAAVPVGDHFTM 177
Query: 154 SEREAVDIVDIIRPRIAVPMHYGTY 178
+A VD + +A PMHY T+
Sbjct: 178 GPMQAAVAVDWLDVDVAFPMHYDTF 202
>pir||A69121 conserved hypothetical protein MTH1902 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623035|gb|AAB86362.1| (AE000941) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 230
Score = 73.7 bits (178), Expect = 2e-12
Identities = 57/197 (28%), Positives = 91/197 (45%), Gaps = 20/197 (10%)
Query: 1 MKIVWYGHACFLIKTKGVSILIDPYPD---VDEDRMEKV--DYILITHEHMDHYGKTPLI 55
M+I W+GH+ F I + IL+DP+ V +E+ D I +TH H DH G I
Sbjct: 1 MRIQWFGHSAFEITSSDTRILLDPFISNNPVCSTAVEEFEPDVICVTHGHADHLGDAMEI 60
Query: 56 AKLNDAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAF---------YTEHPT 106
A+ A +I + + GL + G +I + + ++ +TE T
Sbjct: 61 AERTGALLIANHELSVFFSRQGLESTG-MNIGGKISIDGIGIRMVDAKHSSDIDFTEEVT 119
Query: 107 SQ-YPLGYLI-IGDKRVAHLGDTYYSPSFKNLRGQV---DILLVPIGGRSTASEREAVDI 161
S G++I + +V H GDT +++ G++ DI L+PIG R T +A
Sbjct: 120 SGGSACGFIIETREGKVYHAGDTGLFADMRDVIGEIYRPDIALLPIGDRYTMGPEDAAVA 179
Query: 162 VDIIRPRIAVPMHYGTY 178
I+P +PMHY T+
Sbjct: 180 AGWIKPEKVLPMHYNTF 196
>dbj|BAB06835.1| (AP001517) unknown conserved protein in others [Bacillus
halodurans]
Length = 305
Score = 69.5 bits (167), Expect = 3e-11
Identities = 53/206 (25%), Positives = 93/206 (44%), Gaps = 32/206 (15%)
Query: 5 WYGHACFLIKTKGVSILIDPY-------------PDVDEDRMEKVDYILITHEHMDHYGK 51
W GH+ FL++ KG++IL DP P + D + ++D ++I+H H DH
Sbjct: 60 WIGHSSFLLQMKGLNILTDPVFAKYLGFSKRLISPGLSIDELPEIDIVVISHGHYDHLEF 119
Query: 52 TPLIAKLNDAEVIGPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPT----- 106
+ L + + P + L+ GL +V E Q D+T+ +H T
Sbjct: 120 STLRSLKGEPIFYVPAGLNLLFQKKGLHRVEEANWWDTFQHQDLTIHFVPAQHWTRRSLF 179
Query: 107 ---SQYPLGYLIIGDKRVAH-LGDTYYSPSFKNL--RGQVDILLVPIGG--------RST 152
+ + G+++ D+ + +GDT Y F+ + + +D + +PIG S
Sbjct: 180 DTNTSHWGGWVLESDEETNYFVGDTGYFRGFQEIGKKFALDTVFMPIGSYEPEWFTYASH 239
Query: 153 ASEREAVDIVDIIRPRIAVPMHYGTY 178
+ +AV ++ + VPMHYGTY
Sbjct: 240 INPEDAVKAFVELQAKTFVPMHYGTY 265
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.142 0.424
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83769626
Number of Sequences: 2977
Number of extensions: 3484314
Number of successful extensions: 7751
Number of sequences better than 1.0e-10: 16
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7721
Number of HSP's gapped (non-prelim): 16
length of query: 210
length of database: 189,106,746
effective HSP length: 51
effective length of query: 159
effective length of database: 158,583,909
effective search space: 25214841531
effective search space used: 25214841531
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)