BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2272 (PAB2272) DE:Hypothetical protein
(333 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (st... 660 0.0
pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii ... 473 e-132
gi|11498311 conserved hypothetical protein [Archaeoglobus fulgid... 169 4e-41
pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii ... 151 1e-35
pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (st... 144 2e-33
gi|11499555 conserved hypothetical protein [Archaeoglobus fulgid... 141 1e-32
pir||F69117 conserved hypothetical protein MTH1873 - Methanobact... 139 3e-32
sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir... 130 3e-29
pir||C72711 hypothetical protein APE1106 - Aeropyrum pernix (str... 119 4e-26
emb|CAC11965.1| (AL445065) conserved hypothetical protein [Therm... 118 9e-26
gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1] 104 1e-21
gb|AAK42392.1| Conserved hypothetical protein [Sulfolobus solfat... 97 3e-19
gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfat... 97 3e-19
pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (str... 96 6e-19
pir||C69027 conserved hypothetical protein MTH1200 - Methanobact... 89 7e-17
pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi... 85 1e-15
pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii ... 83 4e-15
pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thalian... 81 2e-14
gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1] 80 4e-14
dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens] 76 5e-13
sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir... 75 1e-12
emb|CAC12055.1| (AL445065) conserved hypothetical protein [Therm... 71 2e-11
gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melan... 70 3e-11
>pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (strain Orsay)
>gi|5457546|emb|CAB49037.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 333
Score = 660 bits (1684), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MSGVKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELP 60
MSGVKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELP
Sbjct: 1 MSGVKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELP 60
Query: 61 MRPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVK 120
MRPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVK
Sbjct: 61 MRPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVK 120
Query: 121 VIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
VIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL
Sbjct: 121 VIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
Query: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII
Sbjct: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
Query: 241 HGDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE 300
HGDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE
Sbjct: 241 HGDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE 300
Query: 301 CRRQGKECRVSVRKVSDYKPHVYKVCADVEILS 333
CRRQGKECRVSVRKVSDYKPHVYKVCADVEILS
Sbjct: 301 CRRQGKECRVSVRKVSDYKPHVYKVCADVEILS 333
>pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii
>gi|3256501|dbj|BAA29184.1| (AP000001) 296aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 296
Score = 473 bits (1205), Expect = e-132
Identities = 218/295 (73%), Positives = 270/295 (90%), Gaps = 1/295 (0%)
Query: 38 IFPVTDTNIAKSLGLEVV-DVELPMRPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVS 96
+FPV D AK LGLEVV ++ELP+RPERQIY+NLEDLLP+++ +K+GRLDIVGDIAI+S
Sbjct: 1 MFPVVDDVKAKELGLEVVYNLELPLRPERQIYRNLEDLLPKDVVEKVGRLDIVGDIAIIS 60
Query: 97 IPDEILSEREVIVSAIRKLYPKVKVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVL 156
IPDE++ + VIV AIRKLYPK+KVIARRGFH+G+YR+R LEVIWGENRL TIHKENGVL
Sbjct: 61 IPDELMPRKGVIVEAIRKLYPKIKVIARRGFHTGVYRVRRLEVIWGENRLQTIHKENGVL 120
Query: 157 IKVDLSKVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINE 216
+K+DLSKVFFNPRMKGERYR+AQL+ DGERIL+PFAGV+PY LVIARF+ V++ AVE+N+
Sbjct: 121 LKIDLSKVFFNPRMKGERYRLAQLIKDGERILIPFAGVLPYALVIARFRKVDIVAVELND 180
Query: 217 FAVKLAEENLELNRDRLKGKIKIIHGDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAE 276
AVKLA+EN+ LN+D+LKGKI IIHGDVF+VLP LP+FDRV+SPTPKGVDAL+LTLSKA+
Sbjct: 181 EAVKLAQENVLLNKDKLKGKISIIHGDVFDVLPKLPSFDRVISPTPKGVDALALTLSKAK 240
Query: 277 KFLHYYDFVHESEIERFRERVLEECRRQGKECRVSVRKVSDYKPHVYKVCADVEI 331
+FLHYYDF+HE ++ F+E++++EC++QGKEC+V VRKV+DYKPHVYKVCAD+EI
Sbjct: 241 RFLHYYDFIHEDKLGEFKEKIIKECQKQGKECKVKVRKVADYKPHVYKVCADIEI 295
>gi|11498311 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450738|pir||H69337 conserved hypothetical protein
AF0704 - Archaeoglobus fulgidus
>gi|2649912|gb|AAB90537.1| (AE001056) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 273
Score = 169 bits (424), Expect = 4e-41
Identities = 105/270 (38%), Positives = 162/270 (59%), Gaps = 11/270 (4%)
Query: 71 LEDLLPREIFKKLGR-LDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIARR-GFH 128
L+D L E K + R +I+GD+ I+ IPDEI+ IV AI K + VK + R+ G
Sbjct: 7 LKDRLSEEELKLVRRSFEIIGDVVIIEIPDEIMHHSRDIVEAILKRHKHVKTVLRKVGEV 66
Query: 129 SGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERIL 188
G+YR+ E I+GE + T+ +E+G VD +K +++ ++ GER RIA+LV +GER+L
Sbjct: 67 DGVYRVARYEPIYGE-KTETVVREHGCRFLVDPTKAYYSVKLSGERERIARLVGEGERVL 125
Query: 189 VPFAGVIPYPLVIARF-KNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDVFEV 247
V FAGV PYP+VIA+ + EV VE+N AV+ +N+ LN +++G +K+I GDV EV
Sbjct: 126 VMFAGVGPYPIVIAKLARPREVVGVELNPHAVEYFRQNVRLN--KVEGVVKVIEGDVEEV 183
Query: 248 LPNLP-NFDRVVSPTPKGVD-ALSLTLSKAEK--FLHYYDFVHESEIERFRERVLEECRR 303
+P L FDRVV P P + + L K + F+HYY F ++E + E+V +
Sbjct: 184 VPQLSGQFDRVVMPAPYSAENFIHLLRGKVRRGGFVHYYTFDSQNEEKILPEKVRRKFED 243
Query: 304 QGKECR-VSVRKVSDYKPHVYKVCADVEIL 332
+G E V +R+ ++ P+V + D+ +L
Sbjct: 244 EGLEVEVVKMRRCGNFAPYVNRYVLDLRVL 273
>pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii
>gi|3257839|dbj|BAA30522.1| (AP000006) 330aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 330
Score = 151 bits (377), Expect = 1e-35
Identities = 110/336 (32%), Positives = 180/336 (52%), Gaps = 20/336 (5%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRP 63
VKV+ ++ +KV L +G L+ + K R+E +++ PV G EVV+VEL
Sbjct: 5 VKVQIKEGEKVRRKLIELGALNREYKIKREEGFLLIPVK----FPVEGFEVVEVELERVE 60
Query: 64 ER-QIYKNLEDLLPREIFKKL-GRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKV 121
R YK++ ++ PRE+ K L DI+G+IAI+ IP E+ + I AI +++ VK
Sbjct: 61 TRPNSYKDVVNI-PRELRKFLPSSFDIIGNIAIIEIPSELQNYSNEIGGAIIRVHKSVKA 119
Query: 122 IARRGFH-SGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
+ +G G YR+R L I GE TIH+ENGV +K+D++KV+F+PR+ ER R+ ++
Sbjct: 120 VYMKGGSVEGEYRVRNLIHIAGEKITETIHRENGVRLKLDITKVYFSPRLATERMRVFKM 179
Query: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
+GE + FAGV P+ +++A+ K V+A +IN +A+K EEN++LN K+K I
Sbjct: 180 AREGEIVFDMFAGVGPFSILLAK-KARMVFACDINPWAIKYLEENIKLN------KVKNI 232
Query: 241 HGDVFEVLPNLPNFDRVVSPTPKGVDAL---SLTLSKAEKFLHYYDFVHESEIERFR-ER 296
+ +V DR++ PK ++ +HYY F E + + +R
Sbjct: 233 IPILSDVTKVCVKADRIIMNLPKYASRFLEHAMRCVNNGGIIHYYGFGPEKDPYGWHVKR 292
Query: 297 VLEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEI 331
+ E R G + + R + +Y P Y + D +
Sbjct: 293 INEVAGRLGVKVEILGKRIIRNYAPRQYNIAIDFRV 328
>pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (strain Orsay)
>gi|5458164|emb|CAB49653.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 330
Score = 144 bits (359), Expect = 2e-33
Identities = 107/336 (31%), Positives = 177/336 (51%), Gaps = 20/336 (5%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRP 63
VKV ++ + V L +G LD K R+ +++ PV G EVV+ EL
Sbjct: 5 VKVPLKEGEIVRRRLIELGALDNTYKIKREGNFLLIPVK----FPVKGFEVVEAELEQVS 60
Query: 64 ER-QIYKNLEDLLPREIFKKLGR-LDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKV 121
R Y+ + ++ P+E+ + L DI+G+IAI+ IP+E+ + I AI +++ VK
Sbjct: 61 RRPNSYREIVNV-PQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKA 119
Query: 122 IARRGFH-SGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
+ +G G YR REL I GEN TIH+ENG+ +K+D++KV+F+PR+ ER R+ ++
Sbjct: 120 VYMKGSKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKM 179
Query: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
+GE + FAGV P+ +++A+ K V+A +IN +A+K EEN++LN+ + I
Sbjct: 180 AQEGEVVFDMFAGVGPFSILLAK-KAELVFACDINPWAIKYLEENIKLNK---VNNVVPI 235
Query: 241 HGDVFEVLPNLPNFDRVVSPTPKGVDAL---SLTLSKAEKFLHYYDFVHESEIERFR-ER 296
GD E+ DR++ PK +++ +HYY F E + + ER
Sbjct: 236 LGDSREIEVKA---DRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLER 292
Query: 297 VLEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEI 331
+ E + G + V R + +Y P Y + D +
Sbjct: 293 IRELANKFGVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
>gi|11499555 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450736|pir||D69496 conserved hypothetical protein
AF1973 - Archaeoglobus fulgidus
>gi|2648568|gb|AAB89282.1| (AE000967) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 336
Score = 141 bits (352), Expect = 1e-32
Identities = 107/336 (31%), Positives = 175/336 (51%), Gaps = 13/336 (3%)
Query: 1 MSGVKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELP 60
M V+V + +A++V L + +G+ D R+ YV P+ D+ + G +V+ + P
Sbjct: 8 MKAVRVPKSEAEQVRRLAEKLGVKDKSRRITATGDYVEIPIIDSAESFFKGYTIVEQDNP 67
Query: 61 M-RPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKV 119
+ +R + + L +P E+ ++GDI +V + + +VI A+ ++ P
Sbjct: 68 VFSRKRSLREILRGKVPEELIPT--NYKVIGDIVVVKLDERAREYAKVIGEALMQINPCK 125
Query: 120 KVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQ 179
V G + G+ R +E+I GE + T H+ENG ++D++KV F+ + ER RIA+
Sbjct: 126 AVWCDYGRY-GMKRKPRMELIAGEGSV-TEHRENGCRFRIDVAKVMFSLGNQAERMRIAR 183
Query: 180 LVNDGERILVPFAGVIPYPLVIA-RFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIK 238
LV DGE ++ FAG+ + + IA K +Y++EIN + KL EN++LN G I
Sbjct: 184 LVEDGEVVVDMFAGIGYFSIPIAVHSKARRIYSIEINPESYKLLLENIKLND---VGNIV 240
Query: 239 IIHGDVFEVLPNLPNFDRVVSPTPKGVDAL--SLTLSKAEKFLHYYDFVHESEIERFRER 296
I GD V P DRVV D L ++ K +HY++ E+ I+R R
Sbjct: 241 PILGDSQFVTPE-GVADRVVMGHIYCHDYLHTAIRALKERGVVHYHEATPEAVIDRPVRR 299
Query: 297 VLEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEI 331
V + CR+ GK+CR+ +KV +Y P VY V D E+
Sbjct: 300 VEKACRKMGKKCRILGFKKVKNYSPGVYHVVVDAEV 335
>pir||F69117 conserved hypothetical protein MTH1873 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623010|gb|AAB86339.1| (AE000939) met-10+ protein
[Methanobacterium thermoautotrophicum]
Length = 352
Score = 139 bits (348), Expect = 3e-32
Identities = 105/340 (30%), Positives = 167/340 (48%), Gaps = 14/340 (4%)
Query: 1 MSGVKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVT-DTNIAKSLGLEVVDVEL 59
M G+KV + A ++++L + +L+ + RD ++V P+ D I + G E+VD E
Sbjct: 1 MKGLKVPKRMANDIIKMLVAGSLLNRDYRISRDHEHVYIPLREDVRIPEIDGAEIVDREF 60
Query: 60 P--MRPERQIYKNLEDLLPREIFKKLGR-LDIVGDIAIVSIPDEILSEREVIVSAIRKLY 116
R + L+ +P + + R DI+GD I+ IP+E+ R +I A +
Sbjct: 61 KESKRSPARFTDILKSKIPEDALASIRRSFDIIGDTVILEIPEELQDYRFIIGEAALEFT 120
Query: 117 PKVKVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYR 176
+ V +R G+ R RELE+I G TIH+E G IKVD+ V+F+PR+ ER
Sbjct: 121 GRKAVYMKRSGVKGVTRTRELELIAGSALSETIHQEYGSRIKVDIKDVYFSPRLANERET 180
Query: 177 IAQLVNDGERILVPFAGVIPYPLVIARF-KNVEVYAVEINEFAVKLAEENLELNRDRLKG 235
+A V DGE +L FAG P+ + +AR + VYAV+IN AV+ EEN LN +
Sbjct: 181 VAAQVKDGEVVLDMFAGAGPFAIAVARHGRASRVYAVDINPAAVRYIEENARLN--HAED 238
Query: 236 KIKIIHGDVFEVLPNLPNF-DRVVSPTPKGVDAL---SLTLSKAEKFLHYYDFVHESEIE 291
I + GDV E L + F D ++ P ++ + +HYY+F + +
Sbjct: 239 VIVAVEGDVREFLRDRECFADHIIMNLPGSACEFLDDAIRALRDGGVIHYYEFARDFKTP 298
Query: 292 RFRERVLEECRRQGKECRVSVRKVSDYKPHVYKVCADVEI 331
R L+E + + +R+V P V+ + D I
Sbjct: 299 VNR---LKEAAKPFHVDVLDMRRVKSRSPGVWHMGIDARI 335
>sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir||C64410 hypothetical
protein MJ0883 - Methanococcus jannaschii
>gi|1499713|gb|AAB98887.1| (U67532) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 336
Score = 130 bits (323), Expect = 3e-29
Identities = 110/354 (31%), Positives = 183/354 (51%), Gaps = 51/354 (14%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTN--IAKSL---GLEVVDVE 58
+K+ ++ ++ +L +L+ K + Y+ P+ D + I KS+ E+VD E
Sbjct: 5 LKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKE 64
Query: 59 LPMRPERQIYK--NLEDLLPREIFKKLGR------LDIVGDIAIVSIPDEILSE-REVIV 109
L E++I K + +++ ++ K++ D+VGD+ I+ I DE+ + R+ I
Sbjct: 65 LE---EKKIIKKPSFREIISKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIG 121
Query: 110 SAIRKLYPKVKVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPR 169
KL P V R+ G +R+RELE + GENR TIHKENG + VD++KV+F+PR
Sbjct: 122 ELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPR 181
Query: 170 MKGERYRIAQLVNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELN 229
+ GER RI + V+ + ++ FAGV P+ + K ++YA++IN A++L ++N++LN
Sbjct: 182 LGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAK--KIYAIDINPHAIELLKKNIKLN 239
Query: 230 RDRLKGKIKIIHGDVFE-------VLPNLPNFDRVVSPTPKGVDALSLTLSKAEKFLHYY 282
+L+ KI I DV E V+ NLP F K +D +L + + +HYY
Sbjct: 240 --KLEHKIIPILSDVREVDVKGNRVIMNLPKF------AHKFIDK-ALDIVEEGGVIHYY 290
Query: 283 ----DFVHESEIERFRERVLEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEI 331
DF + I+ F ++ +C V R V Y P Y + D +I
Sbjct: 291 TIGKDF--DKAIKLFEKKC---------DCEVLEKRIVKSYAPREYILALDFKI 333
>pir||C72711 hypothetical protein APE1106 - Aeropyrum pernix (strain K1)
>gi|5104776|dbj|BAA80091.1| (AP000060) 350aa long
hypothetical protein [Aeropyrum pernix]
Length = 350
Score = 119 bits (296), Expect = 4e-26
Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 35/349 (10%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIA----KSLGLEVVDVEL 59
V V+ D ++ + LL++ G+LD K R ++ PV D +A +S GLE
Sbjct: 11 VAVKTVDGERAIRLLRAAGLLDTGFKPARSGGRLMLPVEDAELALEALRSSGLEAWPCRA 70
Query: 60 PMRPERQIYKNLEDLLPREI----FKKLGRLDIVGDIAIVSIPD--EILSEREVIVSAIR 113
P R+ PR + F+ L +VGDIA+ S + + E A+
Sbjct: 71 SFEPRRR---------PRGLRSLGFEGLSGYSLVGDIAVFSRREGGPGVEEYRRAAEALM 121
Query: 114 KLYPKVKVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGE 173
+ P+V+ + + G R++ L + GE R T+H+E G+ +VD+++ +FNPR+ E
Sbjct: 122 REQPRVRAVYLKEATVGELRVQRLVHLAGEERTWTVHREFGLEFEVDIARAYFNPRLANE 181
Query: 174 RYRIAQLVNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRL 233
+A+ V +GER+L F+GV + + A + V A +IN A LA N NR RL
Sbjct: 182 HRLVAESVGEGERVLDMFSGVGGFSIHTASLRRASVVASDINPHAALLAARNARRNRRRL 241
Query: 234 KGKIKIIHGDVFEVLPNL--PNFDRVVSPTPKGV-----DALSLTLSKAEKFLHYYDFVH 286
+G++ ++ D +LP + P F ++ P +A L S + L Y +
Sbjct: 242 RGRVSVLRADA-ALLPRILQPVFTTIIMNHPTASHMFAWEACRLASSGGARVLFYR--LS 298
Query: 287 ESEIERFRERVLEECRRQGKECRVSV---RKVSDYKPH--VYKVCADVE 330
ES + E L+ R RV V R+V +Y P VY+V VE
Sbjct: 299 ES-CPQAEEDALQAFTRAPCCRRVEVRWCRRVLEYSPSAAVYRVEVAVE 346
>emb|CAC11965.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 306
Score = 118 bits (293), Expect = 9e-26
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 32/293 (10%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRP 63
V+VR+ A++ + L++ G+ D RD YV+ PVTD + + +E +
Sbjct: 7 VRVRKHMAERTIRDLRNAGLYDTNYTIARDGDYVLIPVTDDYSGEHVVMEAEPTNMRRSA 66
Query: 64 ERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIA 123
G D +G IAI+ DE L+ ++ + K++ +
Sbjct: 67 S-------------------GSFDTIGSIAIMKKYDEALANDILLT------HKKIRSVF 101
Query: 124 RRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVND 183
G RIR+L ++ GEN T ++ENG VD++K +F+PR+ ER RI V+D
Sbjct: 102 FDEGVGGPERIRKLRLVAGENNTVTEYRENGCSFTVDVAKAYFSPRLATERRRIVDQVSD 161
Query: 184 GERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGD 243
GE I FAGV P + IAR++ V + A +IN AV++ +EN+E N L+G I+ D
Sbjct: 162 GEFIFDMFAGVGPISIEIARYRRVRIIAADINCDAVEMLKENMEKN--PLRGIIEPFCED 219
Query: 244 VFEVLPNLPNFDRVVSPTPKG----VDALSLTLSKAEKFLHYYDFVHESEIER 292
+ DRV+ P +D TL + ++YY+F+ S++++
Sbjct: 220 ARIAAERVTGADRVIMNHPTASFEFIDYAVKTLREG-GVINYYEFLDNSKVDK 271
>gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1]
Length = 327
Score = 104 bits (258), Expect = 1e-21
Identities = 97/337 (28%), Positives = 149/337 (43%), Gaps = 27/337 (8%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRP 63
V+V +D + + L ++D + + PVTD L VV + P R
Sbjct: 6 VRVPVDDGEATRQRLADADLIDDTHAIAAADGALHIPVTDAAAVPD-ALSVVSFDAPPRR 64
Query: 64 ERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVS--AIRKLYPKVKV 121
+ ++ P RL GDI IV DE S+R ++ + P V
Sbjct: 65 TQTTPADILGFDP-----SYARL---GDIVIV---DEDDSDRAHAIADAVVESDIPVEAV 113
Query: 122 IARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLV 181
+ R G R+RE +VI G++ T+H+E G +D++ V+F+PR+ ER+R+ + V
Sbjct: 114 LNRASKIKGEQRVREWDVIAGDST-ETVHREYGHAFALDVAAVYFSPRLATERHRVVEQV 172
Query: 182 NDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELN--RDRLKGKIKI 239
GE + FAGV PY + +A V A ++NE A+ + N N DR+ G
Sbjct: 173 TAGEHVFDMFAGVGPYAVPMAS-AGARVVATDVNETAIDYLQANAARNGVADRVTG---- 227
Query: 240 IHGDVFEVLPNLPNF-DRVVSPTPKGVDAL---SLTLSKAEKFLHYYDFVHESEIERFRE 295
+ GDV EV + DR+V P D ++ L+ E LH+YD HE E
Sbjct: 228 VAGDVREVAGEYTGWADRIVMNLPHTADEFLETAVALAGDECTLHFYDIQHEDGRFDAGE 287
Query: 296 RVLEECRRQGKECRVSVR-KVSDYKPHVYKVCADVEI 331
+ R + V+ R V Y PH + V DV +
Sbjct: 288 AAIRAAARPAYDVTVATRHTVRSYAPHEFNVVLDVSL 324
>gb|AAK42392.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 276
Score = 96.7 bits (237), Expect = 3e-19
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 78 EIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIARRGFHSGLYRIREL 137
E F + IVG+IAI++ P + + ++ I + +PK+K + + G R EL
Sbjct: 38 EFFPGVRSYYIVGEIAIIT-PKRVNVDYNLVAEKIMQAHPKIKAVYLKKKVKGELRTNEL 96
Query: 138 EVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPY 197
E + GE TI+KENGVL VD++KV+ NP + G+R + +LV +G +L F G
Sbjct: 97 EFLSGERISSTIYKENGVLFYVDINKVYVNPSLSGDRLKNLELVEEGSTVLDAFTGYGAI 156
Query: 198 PLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDVFEVLPNLPNFDRV 257
L IA K V V A +IN + + +++L LN ++KG I I+ D +LP D+V
Sbjct: 157 ALNIAHKKRVYVVAGDINIDGLYMLKKSLSLN--KIKGMIDIVQYDAH----HLPFRDKV 210
>gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 262
Score = 96.7 bits (237), Expect = 3e-19
Identities = 81/272 (29%), Positives = 139/272 (50%), Gaps = 19/272 (6%)
Query: 65 RQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREV-IVSAIRKLYPKVKVI- 122
+ + K L+D ++I+K R++IVGDI I+ +P E V I + I +P VK +
Sbjct: 2 KTLIKRLQD--QQDIWK---RIEIVGDIVIIGVPFNKKPEDLVEIANEILSTFPYVKSVW 56
Query: 123 ARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVN 182
R +G YR+ + GE R T++KE+ +D +KVFF+ ++ E R+A V
Sbjct: 57 GRHRDVNGTYRLSTYVHLAGEKRSETVYKEHKCKYFLDFTKVFFSEKLSYEHLRVATQVK 116
Query: 183 DGERILVPFAGVIPYPLVIARFKNVE-VYAVEINEFAVKLAEENLELNRDRLKGKIKIIH 241
E I+ F+G P+ ++ A + VY++++N +A N+ELN+ ++ I+
Sbjct: 117 RDEIIINMFSGFGPFSILSAVLGRPKIVYSIDLNPYAYYYMMVNVELNK---AYEVLPIY 173
Query: 242 GDVFEVLPNLPNFDRVVSPTPKGVD-ALSLTLSKAEK--FLHYYDFVHESEIERFRERVL 298
GD F+ + L + DR+++P P+ D A + L K +K +H Y V ++ E +
Sbjct: 174 GDAFKRIYELEDADRIIAPLPELADKAYEVALQKVKKGGIIHLYTEVETNKGEDPVRIAM 233
Query: 299 EECRRQGKECRVSVRKVSDYKPHVYKVCADVE 330
+ R G VR V+ PH Y V D++
Sbjct: 234 NKYR--GSYFGRIVRSVN---PHKYHVVVDIK 260
>pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (strain K1)
>gi|5104478|dbj|BAA79793.1| (AP000060) 341aa long
hypothetical protein [Aeropyrum pernix]
Length = 341
Score = 96.0 bits (235), Expect = 6e-19
Identities = 76/263 (28%), Positives = 135/263 (50%), Gaps = 18/263 (6%)
Query: 85 RLDIVGDIAIVSIPDE---ILSEREVIVSAIRKLYPKVKVI-ARRGFHSGLYRIR-ELEV 139
R+DI+GDIA++ P + + ++ + + P V+ + G GL+++R +L
Sbjct: 77 RIDIIGDIAVIKKPIHGGVSIEDLRLVAGELLRRLPHVRSVWLATGPVGGLFKVRRDLLH 136
Query: 140 IWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPYPL 199
+ GE R T+++E+G VD+SKVF PR+ E R+A+LV GE ++ FAGV + +
Sbjct: 137 LAGEKRTSTVYREHGAEFLVDISKVFITPRLSFEHLRVARLVKPGETVVNMFAGVGVFSI 196
Query: 200 VIA-RFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDVFEVLPNLPN--FDR 256
+IA + + +VY+++IN A +L EN+ LN R++ ++ + GD ++ DR
Sbjct: 197 IIALKSRPSKVYSIDINPDAYRLMIENIRLN--RVEDVVEPMLGDSARIVSESLRGVADR 254
Query: 257 VVSPTPK-GVDAL--SLTLSKAEKFLHYYDFVH----ESEIERFRERVLEECRRQG-KEC 308
V+ P P +D + +L + +LH Y V + + R + V E R+G +
Sbjct: 255 VLMPLPDLALDYIGHALDALRGRGWLHVYLHVDYERGKGHLRRACKLVEAEVERRGWRVV 314
Query: 309 RVSVRKVSDYKPHVYKVCADVEI 331
R V P + +V D +
Sbjct: 315 EAKARVVRSVGPKLLQVVVDAVV 337
>pir||C69027 conserved hypothetical protein MTH1200 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622309|gb|AAB85689.1| (AE000888) met-10+ related
protein [Methanobacterium thermoautotrophicum]
Length = 244
Score = 88.9 bits (217), Expect = 7e-17
Identities = 86/255 (33%), Positives = 126/255 (48%), Gaps = 32/255 (12%)
Query: 89 VGDIAIVSIP---DEILSEREVIVSAIRKLYPKVKVIARRGFHSGLYRIRELEVIWGENR 145
+GDI +++ E L E E + S IR G H L R R + V+ G
Sbjct: 9 IGDIIVLNREADDPEALLEMEGVRSVIRV----------EGIHGPLRRPR-VRVLAGSGT 57
Query: 146 LHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPYPLVIARFK 205
T+HKENG L ++DLS+V ++ ER RI LV +GE ++ FAG+ + + +A
Sbjct: 58 -ETVHKENGCLFRIDLSRVMWSRGNINERARIPSLVEEGETVVDMFAGIGYFSIPVAVHS 116
Query: 206 NV-EVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDVFEVLPNLPNFDRV----VSP 260
+ VY+VE+N + +L + N+ LN R++G I+ I GD EV P L + DRV V
Sbjct: 117 DPGRVYSVELNPDSFELLKSNITLN--RVEGIIEPILGDCREVAPEL-DADRVIMGYVGR 173
Query: 261 TPKGVDALSLTLSKAEKFLHYYDFVHESEIERFR-ERVLEECRRQGKECRVSV---RKVS 316
T +DA ++ + +HY HE+ E R R L R RVS+ R +
Sbjct: 174 THHFLDA-AMECVRDGGVIHY----HETAPEAIRFSRPLRRIERAAHPRRVSLLDKRVIK 228
Query: 317 DYKPHVYKVCADVEI 331
Y P V+ V DV I
Sbjct: 229 KYSPGVWHVVLDVRI 243
>pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi (strain Orsay)
>gi|5458690|emb|CAB50177.1| (AJ248287) MET-10+ RELATED
PROTEIN. [Pyrococcus abyssi]
Length = 278
Score = 85.0 bits (207), Expect = 1e-15
Identities = 70/273 (25%), Positives = 137/273 (49%), Gaps = 19/273 (6%)
Query: 65 RQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIAR 124
R++ +L LLP+ K +GDI ++ + E+ + I K+ VK + R
Sbjct: 16 RELPPDLLALLPKRWVK-------LGDILLLPLRPELEPYKYRIAEVYAKVLG-VKTVLR 67
Query: 125 RGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDG 184
+G G R + E+++G + + T+H ENG+ K+D++K+ F+P ER R+A++
Sbjct: 68 KGHIYGETRKPDYEILYGNDTI-TVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
Query: 185 ERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDV 244
E ++ FAG+ L IA + V A+E + + K EN++LN +++ ++ + D
Sbjct: 127 ELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLN--KVQDRMSAYNMDN 184
Query: 245 FEVLPNLPNFDRV----VSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE 300
+ P DR+ V T + + +L+++K E +HY++ V E + ++
Sbjct: 185 RD-FPGENIADRILMGYVVKTAEFIPK-ALSIAKDEAIIHYHNTVPEKLMPEEPFATFKK 242
Query: 301 -CRRQGKEC-RVSVRKVSDYKPHVYKVCADVEI 331
R G E +++ ++ Y P V+ V D+++
Sbjct: 243 IAREHGYEAEKINELRIKRYAPGVWHVVVDIKV 275
>pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii
>gi|3257203|dbj|BAA29886.1| (AP000003) 278aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 278
Score = 83.1 bits (202), Expect = 4e-15
Identities = 72/276 (26%), Positives = 138/276 (49%), Gaps = 19/276 (6%)
Query: 66 QIYKNLEDLLPREIFKKLGRLDI-VGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIAR 124
+I + L LP E+ K L + + +GD+ ++ + E+ + I ++ VK + R
Sbjct: 9 RIREILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEVLG-VKTVLR 67
Query: 125 RGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDG 184
+G G R + E+++G + + T+H ENG+ K+D++K+ F+P ER R+A++
Sbjct: 68 KGHIHGETRKPDYELLYGSDTV-TVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPD 126
Query: 185 ERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDV 244
E ++ FAG+ L IA + +V A+E + + K EN+ LN +++ ++ + D
Sbjct: 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDN 184
Query: 245 FEVLPNLPNFDRV----VSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE 300
+ P DR+ V T + + +L+++K +HY++ V E + R E
Sbjct: 185 RD-FPGENIADRILMGYVVRTHEFIPK-ALSIAKDGAIIHYHNTVPEKLMPR---EPFET 239
Query: 301 CRRQGKECRVSVRKVSD-----YKPHVYKVCADVEI 331
+R KE V K+++ Y P V+ V D+ +
Sbjct: 240 FKRITKEYGYDVEKLNELKIKRYAPGVWHVVLDLRV 275
>pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thaliana
>gi|7572910|emb|CAB87411.1| (AL163763) putative protein
[Arabidopsis thaliana]
Length = 447
Score = 80.8 bits (196), Expect = 2e-14
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 81 KKLGRLDIV-------------GDIAIVSIPDEILSEREVIVSAIR-KLYPKVKVIARR- 125
KKL L++V G IA +++ DE+L ++VI I K YP++K I +
Sbjct: 78 KKLSELEVVPHSVTLGYSYWSAGHIAHLNLHDELLPFKDVIAKVIYDKNYPRIKTIVNKV 137
Query: 126 GFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGE 185
G S +R+ + EV+ GEN + T K+ G K+D V++N R++ E R++ L GE
Sbjct: 138 GTISNEFRVPKFEVLAGENGMETEVKQYGARFKLDYGLVYWNSRLEHEHMRLSSLFKPGE 197
Query: 186 RILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNR 230
+ FAG+ P+ + A+ K VYA ++N +V+ + N + N+
Sbjct: 198 TVCDMFAGIGPFAIPAAQ-KGCFVYANDLNPDSVRYLKINAKFNK 241
>gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1]
Length = 346
Score = 80.0 bits (194), Expect = 4e-14
Identities = 91/349 (26%), Positives = 152/349 (43%), Gaps = 30/349 (8%)
Query: 4 VKVRREDAKKVLELLKSVGILDGKRKAIR-DEKYVIFPVTDTNIAKSLGLEVVDVEL-PM 61
V V + D+++ ++ L+ G+ D +RK D +V PVT A + + P
Sbjct: 6 VVVPKPDSQRAIDGLEDEGVYDDRRKVREHDADHVELPVTAEPDAVPFERAIAQADPDPR 65
Query: 62 RPERQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKV 121
P+ E + ++G + + D + +A+ +L+ +
Sbjct: 66 APDLGDRLRERGWSAAERERAPSSWAVLGSVILADFTD--CPRPGEVGAALLELHREADT 123
Query: 122 IARRGFH-SGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQL 180
+ RG +G +R ++ V+ G+ T+H E+G +DL+ V F+P K ER R+
Sbjct: 124 VLDRGDGVAGEHRTPDVSVVAGDGDTETVHVEHGTRYALDLAAVMFSPGNKAERARMGDA 183
Query: 181 VNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKII 240
GER+L FAGV + L +AR V AVE N A + EN +LN + + I
Sbjct: 184 TGPGERVLDMFAGVGYFALPMAR-AGATVTAVEKNPTAFRFLAENAQLN--DVAETLDTI 240
Query: 241 HGDVFEVLPNLPNFDRVV---------------SPTPKGVDALSLTLSKAEKFLHYYDFV 285
GD EV + P DR+V + TP +DA +L + LH + V
Sbjct: 241 LGDCREV--DAP-ADRIVMGYYDALGGGPVGDAASTPGYLDA-ALDNLVSGGVLHAHSAV 296
Query: 286 HESEI-ERFRERVLEECRRQGKECR--VSVRKVSDYKPHVYKVCADVEI 331
E+E+ ER R+ C+R G+ + R+V + V+ V D +
Sbjct: 297 PEAELWERPLSRLRAGCQRAGRPAPTVLDTRRVKSHSEGVFHVVIDARV 345
>dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens]
Length = 500
Score = 76.1 bits (184), Expect = 5e-13
Identities = 79/313 (25%), Positives = 138/313 (43%), Gaps = 32/313 (10%)
Query: 4 VKVRREDAKKVLELLKSVGIL-DGKRKAIRD-----------EKYVIFPVTDTNIAKSLG 51
+KVR+E K++ LK + G R+ I D + Y IF A+
Sbjct: 90 LKVRKEIVSKLMRSLKRAALQRPGIRRVIEDPEDKESRLIMLDPYKIFTHDSFEKAELSV 149
Query: 52 LEVVDVELPMRPERQIYKNLEDLLPREIFKKL--------GRLDIVGDIAIVSIPDEILS 103
LE ++V P + + E EI + + +G IA +++ D L
Sbjct: 150 LEQLNVS-PQISKYNLELTYEHFKSEEILRAVLPEGQDVTSGFSRIGHIAHLNLRDHQLP 208
Query: 104 EREVIVSAIRKLYPKV-KVIARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLS 162
+ +I + P + + + +YR ++EV+ GE + T +EN + D S
Sbjct: 209 FKHLIGQVMIDKNPGITSAVNKINNIDNMYRNFQMEVLSGEQNMMTKVRENNYTYEFDFS 268
Query: 163 KVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLA 222
KV++NPR+ E RI +L+ G+ + FAGV P+ + +A+ KN V+A ++N + K
Sbjct: 269 KVYWNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVAK-KNCTVFANDLNPESHKWL 327
Query: 223 EENLELNRDRLKGKI------KIIHGDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAE 276
N +LN+ K K+ + G V E L L + P+ V + +KA
Sbjct: 328 LYNCKLNKVDQKVKVFNLDGKDFLQGPVKEELMQLLGLSKERKPS---VHVVMNLPAKAI 384
Query: 277 KFLHYYDFVHESE 289
KFL + ++ + +
Sbjct: 385 KFLSAFKWLLDGQ 397
>sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir||D64494 conserved
hypothetical protein MJ1557 - Methanococcus jannaschii
>gi|1500450|gb|AAB99577.1| (U67596) met-10+ related
protein [Methanococcus jannaschii]
Length = 249
Score = 74.9 bits (181), Expect = 1e-12
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 16/244 (6%)
Query: 97 IPDEILSEREVIVSAIRKLYPKVK---VIARRGFHSGLYRIRELEVIWGENRLHTIHKEN 153
I D ++ ++E+ IR++ + K ++ +G +R +++++G+ TIHKE
Sbjct: 8 IGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKET-ETIHKEY 66
Query: 154 GVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERILVPFAGVIPYPLVIARFKNVE-VYAV 212
G L K+D++K+ ++ ER R+A + N+ E ++ FAG+ + + +A++ + VYA+
Sbjct: 67 GCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAI 126
Query: 213 EINEFAVKLAEENLELNRDRLKGKIKIIHGDVFEVLPNLPNFDRV----VSPTPKGVDAL 268
E N A EN++LN +L I I+ + L ++ DRV V T K +D
Sbjct: 127 EKNPTAYHYLCENIKLN--KLNNVIPILADNRDVELKDVA--DRVIMGYVHKTHKFLDK- 181
Query: 269 SLTLSKAEKFLHYYDFVHESEI-ERFRERVLEECRRQG-KECRVSVRKVSDYKPHVYKVC 326
+ K +HY++ V E + ER ER+ + G K VRK+ Y P V+ V
Sbjct: 182 TFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHVV 241
Query: 327 ADVE 330
D +
Sbjct: 242 VDAK 245
>emb|CAC12055.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 329
Score = 71.0 bits (171), Expect = 2e-11
Identities = 80/336 (23%), Positives = 148/336 (43%), Gaps = 23/336 (6%)
Query: 6 VRREDAKKVLELLKSVGILDGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRPER 65
+ R A +V++ L G + K + +++ PV + A + +D E R +
Sbjct: 8 IPRRKADEVIKYLMRSGRIRKDLKIKKVGEFIAVPVNGEDPAIEFNVAHLDFE--ERRQE 65
Query: 66 QIYKNLEDLLPREIF---KKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVI 122
I + ++DLL +E R G+ ++ P E E + +++ V
Sbjct: 66 NIKEMMKDLLSKEYGYHGNVPDRWVRYGNALFLNSPIE-----ECVFKVMKRFLGIESVY 120
Query: 123 ARRGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVN 182
G +G RI +E ++G R IH ENG+ K D K+ F+P ER R+ +
Sbjct: 121 VYHGI-AGSERIPVVEFLYGR-RGEVIHIENGIRFKFDPEKIMFSPGNTNERTRMRYMTF 178
Query: 183 DGERILVPFAGVIPYPLVIARFKN-VEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIH 241
+GE +L F+G+ + L +A++ N + ++A +IN A+ +EN +N ++ + I
Sbjct: 179 EGETVLDMFSGIGYFALPVAKYGNPMRIFACDINPDAIHYLKENAVIN--GVENIVVPIL 236
Query: 242 GDVFEVLPNLPNFDRVVSPTPKGVDALSLTLSKAEK----FLHYYDFVHESEIERFRERV 297
GD P P FD ++ K + L L +++K LH+ V + ++ ++ +
Sbjct: 237 GDSRLSCPKGP-FDSIIMGNFKSLMFLPGALERSKKNTRIILHH--LVSQEDLGSYKYSI 293
Query: 298 LEECRRQGKECRV-SVRKVSDYKPHVYKVCADVEIL 332
+ G V V Y P ++ V + IL
Sbjct: 294 MSYTSSLGYLTAVEDSHIVKSYAPKMFHVSTTLRIL 329
>gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melanogaster]
Length = 537
Score = 70.2 bits (169), Expect = 3e-11
Identities = 46/161 (28%), Positives = 83/161 (50%), Gaps = 3/161 (1%)
Query: 71 LEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIARRGFH-S 129
L+ +LP E + L +G IA +++ D +L +++I +R P + + +
Sbjct: 114 LKSVLPTEE-EGLTSYSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSID 172
Query: 130 GLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDGERILV 189
YR +LE+I G+ KENGV + D SKV++NPR+ E RI +++ + +
Sbjct: 173 NTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSDDVLYD 232
Query: 190 PFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNR 230
FAGV P+ + A+ K V A ++N + + + N + N+
Sbjct: 233 VFAGVGPFSIPAAK-KRCHVLANDLNPESFRWLQHNAKRNK 272
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.143 0.402
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118559164
Number of Sequences: 2977
Number of extensions: 5011453
Number of successful extensions: 13411
Number of sequences better than 1.0e-10: 23
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 13371
Number of HSP's gapped (non-prelim): 23
length of query: 333
length of database: 189,106,746
effective HSP length: 56
effective length of query: 277
effective length of database: 155,591,474
effective search space: 43098838298
effective search space used: 43098838298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)