BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2277 (guaB-like2) DE:INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE
RELATED
(136 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75197 yhcV homolog PAB2277 - Pyrococcus abyssi (strain Ors... 265 1e-70
pir||A71231 yhcV homolog PH0107 - Pyrococcus horikoshii >gi|3256... 235 1e-61
sp|P54606|YHCV_BACSU HYPOTHETICAL 14.9 KD PROTEIN IN CSPB-GLPP I... 81 6e-15
sp|P32987|YBP3_ACIAM HYPOTHETICAL 17.7 KD PROTEIN IN BPS2 3'REGI... 78 5e-14
gb|AAK43272.1| Conserved hypothetical protein [Sulfolobus solfat... 77 9e-14
dbj|BAB07461.1| (AP001519) unknown conserved protein in others [... 77 9e-14
pir||A72481 yhcV homolog APE2489 - Aeropyrum pernix (strain K1) ... 75 3e-13
gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfat... 74 6e-13
pir||E72569 yhcV homolog APE1838 - Aeropyrum pernix (strain K1) ... 73 1e-12
sp|Q58069|Y653_METJA HYPOTHETICAL PROTEIN MJ0653 >gi|2128024|pir... 73 1e-12
gb|AAK42712.1| Hypothetical protein [Sulfolobus solfataricus] 72 2e-12
sp|O58045|IMDH_PYRHO INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (IMP... 71 4e-12
pir||G69030 MJ0653 homolog MTH1226 - Methanobacterium thermoauto... 71 5e-12
pir||D71451 MJ0653 homolog PH0267 - Pyrococcus horikoshii >gi|32... 71 5e-12
pir||H72290 conserved hypothetical protein - Thermotoga maritima... 71 5e-12
sp|P42851|IMDH_PYRFU INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (IMP... 70 9e-12
sp|Q57892|Y450_METJA HYPOTHETICAL PROTEIN MJ0450 >gi|2128329|pir... 70 9e-12
pir||E75015 IMP dehydrogenase (EC 1.1.1.205) PAB1250 - Pyrococcu... 70 9e-12
pir||F72730 yhcV homolog APE0383 - Aeropyrum pernix (strain K1) ... 70 1e-11
pir||S41583 yhcV homolog - Methanothermus fervidus 69 3e-11
pir||A75215 MJ0653 homolog PAB2191 - Pyrococcus abyssi (strain O... 69 3e-11
gi|11498453 inosine monophosphate dehydrogenase (guaB-1) [Archae... 68 3e-11
pir||G75056 dehydrogenase PAB0961 - Pyrococcus abyssi (strain Or... 68 6e-11
gb|AAK40465.1| Conserved hypothetical protein [Sulfolobus solfat... 67 8e-11
pir||S75379 MJ1232 protein homolog c04012 - Sulfolobus solfatari... 67 8e-11
pir||E69030 conserved hypothetical protein MJ1225 homolog - Meth... 67 8e-11
>pir||H75197 yhcV homolog PAB2277 - Pyrococcus abyssi (strain Orsay)
>gi|5457540|emb|CAB49031.1| (AJ248283)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE RELATED
[Pyrococcus abyssi]
Length = 136
Score = 265 bits (671), Expect = 1e-70
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR
Sbjct: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
Query: 61 VIVPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSD 120
VIVPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSD
Sbjct: 61 VIVPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSD 120
Query: 121 LLEASRRRLETAISTE 136
LLEASRRRLETAISTE
Sbjct: 121 LLEASRRRLETAISTE 136
>pir||A71231 yhcV homolog PH0107 - Pyrococcus horikoshii
>gi|3256493|dbj|BAA29176.1| (AP000001) 139aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 139
Score = 235 bits (594), Expect = 1e-61
Identities = 116/136 (85%), Positives = 129/136 (94%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
MD+KAPIKVYMTKKL+GVKP T+VQEAS+LMMEFDVGSLVV++D+GNVVGFFTKSDIIRR
Sbjct: 4 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 63
Query: 61 VIVPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSD 120
VIVPGL YDIPV+ IMT+ LIT N NTPLG+VL+KM+EHRIKHILIE+EGKIVGIFTLSD
Sbjct: 64 VIVPGLPYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHILIEEEGKIVGIFTLSD 123
Query: 121 LLEASRRRLETAISTE 136
LLEASRRRLETAIS E
Sbjct: 124 LLEASRRRLETAISAE 139
>sp|P54606|YHCV_BACSU HYPOTHETICAL 14.9 KD PROTEIN IN CSPB-GLPP INTERGENIC REGION
>gi|7429338|pir||B69824 conserved hypothetical protein
yhcV - Bacillus subtilis >gi|1239998|emb|CAA65706.1|
(X96983) hypothetical protein [Bacillus subtilis]
>gi|2633246|emb|CAB12751.1| (Z99108) similar to
hypothetical proteins [Bacillus subtilis]
Length = 140
Score = 80.8 bits (196), Expect = 6e-15
Identities = 43/115 (37%), Positives = 68/115 (58%), Gaps = 1/115 (0%)
Query: 7 IKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGL 66
+K MT ++ V P+ T+QEA+ LM + +VG++ VV+ +G + G T DI R G
Sbjct: 4 VKDTMTTQVATVSPNQTIQEAASLMKQHNVGAIPVVE-QGVLKGMLTDRDIALRTTAQGR 62
Query: 67 SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSDL 121
PV E+M+ EL++ N N L D + M++H+I+ + I D+ +VGI L DL
Sbjct: 63 DGQTPVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>sp|P32987|YBP3_ACIAM HYPOTHETICAL 17.7 KD PROTEIN IN BPS2 3'REGION (ORF3)
>gi|99249|pir||S22196 MJ0653 homolog - Desulfurolobus
ambivalens >gi|40783|emb|CAA45529.1| (X64202) ORF3
[Acidianus ambivalens]
Length = 164
Score = 77.6 bits (188), Expect = 5e-14
Identities = 43/114 (37%), Positives = 68/114 (58%), Gaps = 3/114 (2%)
Query: 12 TKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDIP 71
T K+ VKP+ T+ EA+K M E ++GSLVV+D + VVG T+ DI++ D P
Sbjct: 10 TTKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVK--AASNRDIDSP 67
Query: 72 VKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEA 124
V++ MTK++ V +T + D L M + +H+ +I+ GK+ GI ++ DL A
Sbjct: 68 VEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARA 121
>gb|AAK43272.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 131
Score = 76.9 bits (186), Expect = 9e-14
Identities = 36/115 (31%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
Query: 11 MTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDI 70
+T+ + VKP+T++++A+K+M ++GSL++VD+ +G T+ DI+ R + ++ D
Sbjct: 7 ITRNPLTVKPETSIRDAAKIMKRENLGSLIIVDETNKPIGIVTERDIL-RAVADEVALDS 65
Query: 71 PVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEA 124
PV IMT+ LIT+ N + + L M ++ ++H+ ++ G++VG+ ++ D +A
Sbjct: 66 PVSTIMTRGLITIPPNKDVTEALIIMYQNNVRHLAVVGQSGELVGVISIRDAAKA 120
>dbj|BAB07461.1| (AP001519) unknown conserved protein in others [Bacillus
halodurans]
Length = 643
Score = 76.9 bits (186), Expect = 9e-14
Identities = 41/129 (31%), Positives = 71/129 (54%)
Query: 7 IKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGL 66
I+ MT+ + V+ VQE ++ MM+ S++V++DE + G T+ D++ RVI G
Sbjct: 174 IQDVMTEPAVTVQEQALVQEVARKMMDEGTSSVIVLNDENKLSGIITEKDLVGRVIASGQ 233
Query: 67 SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSDLLEASR 126
S E+MTK T++ + + + ++IKH+ +E+ G+ +G+ TLSDLL+
Sbjct: 234 SKTQKAYEVMTKNPYTISRHAYYYEAMSMFLMNKIKHLPVEEAGRPLGMVTLSDLLQKKN 293
Query: 127 RRLETAIST 135
R I T
Sbjct: 294 RGTLEVIQT 302
>pir||A72481 yhcV homolog APE2489 - Aeropyrum pernix (strain K1)
>gi|5106194|dbj|BAA81505.1| (AP000064) 150aa long
hypothetical protein [Aeropyrum pernix]
Length = 150
Score = 74.9 bits (181), Expect = 3e-13
Identities = 46/123 (37%), Positives = 74/123 (59%), Gaps = 3/123 (2%)
Query: 4 KAPIKV--YMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRV 61
K P++ M +++ VKPD V A+KLM+E +GS++VVDDEG + G T+ DI+ V
Sbjct: 12 KIPVRASDIMITEVVTVKPDDPVTRAAKLMVENLIGSVLVVDDEGRLRGIVTERDIVYVV 71
Query: 62 IVPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSD 120
V EIMT+ I V + L V++KMSE ++H+ +++++G VGI + D
Sbjct: 72 SEAWDPTKHRVWEIMTENPIVVRPDDDLLTVVRKMSETNVRHLPVVDEKGAPVGIISFRD 131
Query: 121 LLE 123
+L+
Sbjct: 132 VLD 134
>gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 156
Score = 74.1 bits (179), Expect = 6e-13
Identities = 40/119 (33%), Positives = 74/119 (61%), Gaps = 3/119 (2%)
Query: 7 IKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGL 66
+K YM +++ V +T ++E +++M + +VGS++VVD+ G +G T+ D++R I G
Sbjct: 33 VKEYMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVR-AIGKGK 90
Query: 67 SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEA 124
S D +EIMT LIT+ ++P+ L M + I+H+ +I+ +G + GI ++ D+ A
Sbjct: 91 SLDTIAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 149
>pir||E72569 yhcV homolog APE1838 - Aeropyrum pernix (strain K1)
>gi|5105529|dbj|BAA80842.1| (AP000062) 109aa long
hypothetical protein [Aeropyrum pernix]
Length = 109
Score = 73.4 bits (177), Expect = 1e-12
Identities = 39/103 (37%), Positives = 59/103 (56%), Gaps = 2/103 (1%)
Query: 29 KLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDIPVKEIMTKELITVNANTP 88
K+M + VVVD + +G FT+ D++R V+ G D PV+E MT+ + V N
Sbjct: 2 KMMYTQGKSAAVVVDQDNRPIGIFTERDVVR-VVATGGDLDAPVEEYMTRNPVAVRDNES 60
Query: 89 LGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEASRRRLE 130
L L M EHR++H+ +++ EGK+VGI T S + E +R E
Sbjct: 61 LTKALALMIEHRVRHLPVVDQEGKLVGIITASSITEVLKRYKE 103
>sp|Q58069|Y653_METJA HYPOTHETICAL PROTEIN MJ0653 >gi|2128024|pir||E64381 conserved
hypothetical protein MJ0653 - Methanococcus jannaschii
>gi|1592300|gb|AAB98648.1| (U67513)
inosine-5'-monophosphate dehydrogenase (guaB)
[Methanococcus jannaschii]
Length = 194
Score = 73.0 bits (176), Expect = 1e-12
Identities = 37/129 (28%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 6 PIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPG 65
P+ M+ ++ + ++ + + +M E ++G++V+V++ +G T+ DI++RV+
Sbjct: 8 PVSEVMSFPVIKATKNMSIYDIANIMTENNIGAVVIVENN-KPIGIVTERDIVKRVVSKN 66
Query: 66 LS-YDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSDLLEA 124
L D+ +E+M+K++IT+ N + + K M+ H IK + + +G++VGI T SD++
Sbjct: 67 LKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVRV 126
Query: 125 SRRRLETAI 133
S LE I
Sbjct: 127 SPELLEIVI 135
>gb|AAK42712.1| Hypothetical protein [Sulfolobus solfataricus]
Length = 142
Score = 72.2 bits (174), Expect = 2e-12
Identities = 36/107 (33%), Positives = 73/107 (67%), Gaps = 3/107 (2%)
Query: 18 VKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDIPVKEIMT 77
VK T +A K+M + ++GS+V+V+++ VG FT+ D++R V G + V+ + T
Sbjct: 16 VKVGTKAIDACKIMYQNNIGSVVIVNEKDYPVGIFTERDVLRAVAC-GKDLNDKVENLGT 74
Query: 78 -KELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLL 122
+L+TV +N+ +G++ +KM ++ I+HI +++DEGK++G+ ++ D++
Sbjct: 75 FGKLVTVKSNSSIGEIAEKMVKNNIRHIVVVDDEGKLIGVVSIKDIV 121
>sp|O58045|IMDH_PYRHO INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (IMP DEHYDROGENASE) (IMPDH)
(IMPD) >gi|7427688|pir||E71456 IMP dehydrogenase (EC
1.1.1.205) - Pyrococcus horikoshii
>gi|3256697|dbj|BAA29380.1| (AP000001) 486aa long
hypothetical inosine-5'-monophosphate dehydrogenase
[Pyrococcus horikoshii]
Length = 486
Score = 71.4 bits (172), Expect = 4e-12
Identities = 49/127 (38%), Positives = 74/127 (57%), Gaps = 11/127 (8%)
Query: 11 MTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDI 70
+ + ++ + PD TV A LM + + L VV+DE VVG TK DI R
Sbjct: 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE-------GK 150
Query: 71 PVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDE-GKIVGIFTLSDLLEASRRRL 129
VKE+MTKE+ITV + + + LK M E+RI + + DE GK+VG+ T+SDL+ +R++
Sbjct: 151 LVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV--ARKKY 208
Query: 130 ETAISTE 136
+ A+ E
Sbjct: 209 KNAVRDE 215
>pir||G69030 MJ0653 homolog MTH1226 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622337|gb|AAB85715.1| (AE000890)
inosine-5'-monophosphate dehydrogenase related protein V
[Methanobacterium thermoautotrophicum]
Length = 187
Score = 71.0 bits (171), Expect = 5e-12
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
M+ K + MT ++ P +V EA+ +M E VGS ++V G T+SDIIR+
Sbjct: 3 METKVTVHDAMTSNVITADPGISVAEAASIMTEKKVGS-IIVKSNSEPEGLITESDIIRK 61
Query: 61 VIVPGL-SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLS 119
V+ L + ++ V E+MT+ LI++ + L + + M+++ I+ + + +G +VGI T S
Sbjct: 62 VVSRDLRASEVTVGEVMTRNLISIEPDRELSEAARLMAKNSIRRLPVVRDGALVGILTSS 121
Query: 120 DLL 122
D++
Sbjct: 122 DVM 124
>pir||D71451 MJ0653 homolog PH0267 - Pyrococcus horikoshii
>gi|3256656|dbj|BAA29339.1| (AP000001) 178aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 178
Score = 71.0 bits (171), Expect = 5e-12
Identities = 41/125 (32%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
M K ++ + +K + VKP +V + +K++ + VGS VV+D +G V+G T+ DI+ +
Sbjct: 1 MAPKILVEQIVKRKAVVVKPTDSVHKVAKVLSKNKVGSAVVMD-KGEVLGVVTERDILDK 59
Query: 61 VIVPGLS-YDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLS 119
V+ G ++ V+EIMTK + + + + D ++ M+E ++ IL+ GK +G T +
Sbjct: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIELMTEKGVRRILVTKFGKPIGFVTAT 119
Query: 120 DLLEA 124
DLL A
Sbjct: 120 DLLAA 124
>pir||H72290 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981687|gb|AAD36216.1|AE001771_9 (AE001771)
conserved hypothetical protein [Thermotoga maritima]
Length = 215
Score = 71.0 bits (171), Expect = 5e-12
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 12/128 (9%)
Query: 7 IKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGL 66
+K +MT+ + + P+T+ EA KLM + + L+V+ +E +VG T+ D++
Sbjct: 3 VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLYASPSKAT 61
Query: 67 SYDI----------PVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGI 115
+ +I ++EIMTK+++TVN NTP+ D + M E I + +++D G++VGI
Sbjct: 62 TLNIWELHYLLSKLKIEEIMTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGRLVGI 121
Query: 116 FTLSDLLE 123
T +D+ +
Sbjct: 122 ITQTDIFK 129
>sp|P42851|IMDH_PYRFU INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (IMP DEHYDROGENASE) (IMPDH)
(IMPD) >gi|2117506|pir||JC4998 IMP dehydrogenase (EC
1.1.1.205) - Pyrococcus furiosus
>gi|595287|gb|AAC44532.1| (U08814) IMP dehydrogenase
[Pyrococcus furiosus]
Length = 485
Score = 70.2 bits (169), Expect = 9e-12
Identities = 43/128 (33%), Positives = 76/128 (58%), Gaps = 11/128 (8%)
Query: 10 YMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYD 69
++ + ++ + PD T+ A LM + + L VV+++ VVG TK DI R
Sbjct: 98 FIVEDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE-------G 149
Query: 70 IPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEASRRR 128
VKE+MT+E+ITV + + + LK M E+RI + ++ ++GK+VG+ T+SDL+ +R++
Sbjct: 150 RTVKELMTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLV--ARKK 207
Query: 129 LETAISTE 136
+ A+ E
Sbjct: 208 YKNAVRNE 215
>sp|Q57892|Y450_METJA HYPOTHETICAL PROTEIN MJ0450 >gi|2128329|pir||B64356 hypothetical
protein MJ0450 - Methanococcus jannaschii
>gi|1591154|gb|AAB98439.1| (U67496) inosine
monophosphate dehydrogenase isolog [Methanococcus
jannaschii]
Length = 186
Score = 70.2 bits (169), Expect = 9e-12
Identities = 41/129 (31%), Positives = 78/129 (59%), Gaps = 4/129 (3%)
Query: 6 PIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGN--VVGFFTKSDIIRRVIV 63
P+ + M K ++ V D +V + +KLM+E DV ++VV + N + T DII++V++
Sbjct: 6 PVLLIMKKPIV-VSGDVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLI 64
Query: 64 PGLSYD-IPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLSDLL 122
L D + V++I + +L+T+ NT + + L+ M++++ + I D+GKIVG+ T DL+
Sbjct: 65 RKLPPDKVKVEDISSGKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKIVGVITEEDLI 124
Query: 123 EASRRRLET 131
+ + + T
Sbjct: 125 KIAPEIIST 133
>pir||E75015 IMP dehydrogenase (EC 1.1.1.205) PAB1250 - Pyrococcus abyssi
(strain Orsay) >gi|5459077|emb|CAB50563.1| (AJ248288)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (EC 1.1.1.205)
(IMP DEHYDROGENASE) (IMPDH) (IMPD). [Pyrococcus abyssi]
Length = 485
Score = 70.2 bits (169), Expect = 9e-12
Identities = 44/128 (34%), Positives = 77/128 (59%), Gaps = 11/128 (8%)
Query: 10 YMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYD 69
++ + ++ + P+ TV A LM + D+ L VV++E VVG +K DI R
Sbjct: 98 FIVEDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAARE-------G 149
Query: 70 IPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTLSDLLEASRRR 128
VKE+MTK++ITV N + + LK M E+RI + +++ EG+++G+ T+SDL+ +R++
Sbjct: 150 KLVKELMTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLV--ARKK 207
Query: 129 LETAISTE 136
+ A+ E
Sbjct: 208 YKNAVRDE 215
>pir||F72730 yhcV homolog APE0383 - Aeropyrum pernix (strain K1)
>gi|5104022|dbj|BAA79338.1| (AP000059) 147aa long
hypothetical protein [Aeropyrum pernix]
Length = 147
Score = 69.9 bits (168), Expect = 1e-11
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 20 PDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYD-IPVKEIMTK 78
P T+V+EA+K+M+E VGSL+VV++ ++G TK+DIIR V+ GL + + V +IMT+
Sbjct: 14 PMTSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGLDPESVRVGDIMTR 73
Query: 79 ELITVNANTPLGDVLKKMSEHRIKH--ILIEDEGKIVGIFTLSDLLE 123
V + + M EH I H +L + K VGI T +D+++
Sbjct: 74 NPYYVYTDDSVERAASLMGEHNIGHLPVLDPETEKPVGIVTKTDIVK 120
>pir||S41583 yhcV homolog - Methanothermus fervidus
Length = 135
Score = 68.7 bits (165), Expect = 3e-11
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 7 IKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGL 66
+K MTK ++ V P+ V A + +M+ + +L VV +G ++G T +D+ +I+
Sbjct: 7 VKDVMTKNVITVDPEEDVVFAFEKLMKNKISALPVVK-KGKLLGIVTATDLGHNLILDKY 65
Query: 67 SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHR-----IKHILIEDEGKIVGIFTLSDL 121
VKEIM K+++ V+ N L DV+KKM EH I +++++ +I GI + D+
Sbjct: 66 KLGTKVKEIMVKDVVCVSPNDTLADVVKKMYEHGDKDEIINQLVVKENDEIKGIISDGDI 125
Query: 122 LEASRRRLE 130
+ A R LE
Sbjct: 126 IRALRSTLE 134
>pir||A75215 MJ0653 homolog PAB2191 - Pyrococcus abyssi (strain Orsay)
>gi|5457677|emb|CAB49168.1| (AJ248283)
INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE related
[Pyrococcus abyssi]
Length = 179
Score = 68.7 bits (165), Expect = 3e-11
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
M K ++ + +K + VKP +V ++++ + VGS VV+D + V+G T+ DI+ +
Sbjct: 1 MATKILVEQVVKRKAVVVKPSDSVHRVARILSKNKVGSAVVMDKD-EVLGIVTERDILDK 59
Query: 61 VIVPGLS-YDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDEGKIVGIFTLS 119
V+ G ++ V+EIMTK + + + + D + M+E ++ IL+ GK +G T +
Sbjct: 60 VVAKGKDPKEVKVEEIMTKNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAA 119
Query: 120 DLLEA 124
DLL A
Sbjct: 120 DLLSA 124
>gi|11498453 inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
fulgidus] >gi|7429344|pir||G69355 MJ0653 homolog AF0847
- Archaeoglobus fulgidus >gi|2649754|gb|AAB90390.1|
(AE001045) inosine monophosphate dehydrogenase (guaB-1)
[Archaeoglobus fulgidus]
Length = 189
Score = 68.3 bits (164), Expect = 3e-11
Identities = 39/127 (30%), Positives = 73/127 (56%), Gaps = 3/127 (2%)
Query: 1 MDVKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRR 60
M P+K MT + VK +V +K ++E+ VGS VVV+D G VG T+ D+I +
Sbjct: 1 MQTDLPVKEVMTTVVCTVKRTDSVHNLAKKLVEYGVGSAVVVED-GRPVGIVTEKDLISK 59
Query: 61 VIVPG-LSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHI-LIEDEGKIVGIFTL 118
++ + + V+E+M++ +IT+ NT L + + M + I+ + ++ + +++GI T
Sbjct: 60 IVARNKVPSKVLVEEVMSQPVITIGPNTSLREAARIMMKRGIRRLPVVNNNQELIGIITD 119
Query: 119 SDLLEAS 125
+D+L S
Sbjct: 120 NDILSVS 126
>pir||G75056 dehydrogenase PAB0961 - Pyrococcus abyssi (strain Orsay)
>gi|5458861|emb|CAB50348.1| (AJ248287) dehydrogenase
[Pyrococcus abyssi]
Length = 392
Score = 67.5 bits (162), Expect = 6e-11
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 4 KAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIV 63
K ++ +MTK ++ + PD TV +A M + + + VVD+EG + G T D+I R I
Sbjct: 129 KRKVEEFMTKDVITLGPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHDLIIRFIK 188
Query: 64 PGLS-------------YDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDE- 109
P + + ++E M K +IT+ + + + M ++ I +++ DE
Sbjct: 189 PRFKAQYGELAGEKIPPFSMKLREAMIKGVITIMPEATIREAVSTMKDNNIDGLVVVDEN 248
Query: 110 GKIVGIFTLSDLLEASRRRLE 130
K+VGI T+ DLL R +E
Sbjct: 249 NKVVGILTVKDLLLPISRMVE 269
>gb|AAK40465.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 300
Score = 67.1 bits (161), Expect = 8e-11
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 4 KAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIV 63
K +K ++KKL+ +KP+T+++EAS + + + V++ + VVG T +DII+
Sbjct: 171 KEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFE 230
Query: 64 PGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIED-EGKIVGIFTLSDLL 122
+Y V + M +I++N N L D ++KM + + +L+ D K VGI T +D+L
Sbjct: 231 G--NYTAKVSDYMKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDIL 288
Query: 123 EA 124
+
Sbjct: 289 RS 290
>pir||S75379 MJ1232 protein homolog c04012 - Sulfolobus solfataricus
>gi|1707784|emb|CAA69582.1| (Y08257) orf c04012
[Sulfolobus solfataricus]
Length = 300
Score = 67.1 bits (161), Expect = 8e-11
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 4 KAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIV 63
K +K ++KKL+ +KP+T+++EAS + + + V++ + VVG T +DII+
Sbjct: 171 KEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFE 230
Query: 64 PGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIED-EGKIVGIFTLSDLL 122
+Y V + M +I++N N L D ++KM + + +L+ D K VGI T +D+L
Sbjct: 231 G--NYTAKVSDYMKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDIL 288
Query: 123 EA 124
+
Sbjct: 289 RS 290
>pir||E69030 conserved hypothetical protein MJ1225 homolog - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622335|gb|AAB85713.1| (AE000890)
inosine-5'-monophosphate dehydrogenase related protein
III [Methanobacterium thermoautotrophicum]
Length = 313
Score = 67.1 bits (161), Expect = 8e-11
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 3 VKAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVI 62
V P+K MT+ ++ + ++ +A +M+E VG+L VVDD+ + G ++ D + ++
Sbjct: 107 VNEPVKSIMTRDVISITTRDSIADAVSMMLENSVGALPVVDDDEKIAGIVSERDFV--LL 164
Query: 63 VPGLSYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILI---------EDEGKIV 113
+ G+ D +E MT ++I+ TP+ K M +R++ I + +E K+V
Sbjct: 165 MAGVFNDEVTEEHMTADVISTTPGTPIEGASKIMVRNRLRRIPVLGEERKTPHPEEEKLV 224
Query: 114 GIFTLSDLLE 123
GI T +D+LE
Sbjct: 225 GIVTSTDILE 234
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.137 0.367
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44133125
Number of Sequences: 2977
Number of extensions: 1673832
Number of successful extensions: 6283
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6202
Number of HSP's gapped (non-prelim): 54
length of query: 136
length of database: 189,106,746
effective HSP length: 57
effective length of query: 79
effective length of database: 154,992,987
effective search space: 12244445973
effective search space used: 12244445973
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)