BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2303 (PAB2303) DE:PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE
DEAMINASE (EC 4.1.99.4) (ACC DEAMINASE)
(330 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V2L2|1A1D_PYRAB PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE ... 657 0.0
sp|O57809|1A1D_PYRHO PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE ... 467 e-130
pir||C71224 probable 1-aminocyclopropane-1-carboxylate deaminase... 467 e-130
pir||D64955 probable 1-aminocyclopropane-1-carboxylate deaminase... 213 2e-54
sp|P76316|1A1D_ECOLI PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE ... 213 2e-54
sp|Q9WY68|1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE ... 208 7e-53
pir||T50268 probable 1-aminocyclopropane-1-carboxylate deaminase... 191 8e-48
dbj|BAA92150.1| (AB038511) ACC deaminase [Penicillium citrinum] 185 5e-46
sp|Q51813|1A1D_PSEFL 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE... 181 9e-45
sp|P30297|1A1D_PSES0 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE... 180 3e-44
sp|Q00740|1A1D_PSESP 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE... 180 3e-44
gb|AAF85968.1| (AF274585) ACC deaminase [synthetic construct] 180 3e-44
gb|AAD05069.1| (AF047710) 1-aminocyclopropane-1-carboxylate deam... 178 6e-44
sp|Q9ZHW3|1A1D_ENTCL 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE... 177 2e-43
gb|AAF79717.1|AC020889_25 (AC020889) T1N15.3 [Arabidopsis thalia... 175 9e-43
pir||PW0041 1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.... 161 9e-39
emb|CAC05972.1| (AL391763) putative deaminase [Streptomyces coel... 76 7e-13
>sp|Q9V2L2|1A1D_PYRAB PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC
DEAMINASE) >gi|7449747|pir||C75192 probable
1-aminocyclopropane-1-carboxylate deaminase (EC
4.1.99.4) PAB2303 [similarity] - Pyrococcus abyssi
(strain Orsay) >gi|5457495|emb|CAB48986.1| (AJ248283)
PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (EC
4.1.99.4) (ACC DEAMINASE) [Pyrococcus abyssi]
Length = 330
Score = 657 bits (1677), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MHPKVDALLSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEF 60
MHPKVDALLSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEF
Sbjct: 1 MHPKVDALLSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEF 60
Query: 61 LLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLKGNYLLDKLMGI 120
LLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLKGNYLLDKLMGI
Sbjct: 61 LLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLKGNYLLDKLMGI 120
Query: 121 ETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKK 180
ETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKK
Sbjct: 121 ETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKK 180
Query: 181 LGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKEL 240
LGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKEL
Sbjct: 181 LGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKEL 240
Query: 241 LGINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKK 300
LGINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKK
Sbjct: 241 LGINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKK 300
Query: 301 GDLGESVLFIHTGGLPGIFHYGEEMLELLV 330
GDLGESVLFIHTGGLPGIFHYGEEMLELLV
Sbjct: 301 GDLGESVLFIHTGGLPGIFHYGEEMLELLV 330
>sp|O57809|1A1D_PYRHO PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC
DEAMINASE)
Length = 325
Score = 467 bits (1188), Expect = e-130
Identities = 223/329 (67%), Positives = 276/329 (83%), Gaps = 4/329 (1%)
Query: 1 MHPKVDALLSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEF 60
MHPK+ ALL++FPR+ LIPWETPIQYLP ISRE+G DVY+KRDDLTGLGIGGNKIRKLE+
Sbjct: 1 MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEY 60
Query: 61 LLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLKGNYLLDKLMGI 120
LLGDALS+G D VIT+GAVHSNHAFVT LAAKKLGL A+L+LRG+E LKGNYLLDK+MGI
Sbjct: 61 LLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGI 120
Query: 121 ETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKK 180
ETR+Y+A +S+ELMK AEE+AEELK EG+KPY+IPPGGASP+GTLGY+R VGE+ TQ +
Sbjct: 121 ETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSE- 179
Query: 181 LGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKEL 240
++ D++V A GSGGT AGL LG +I+N + VGI V E ++ NL+++ EL
Sbjct: 180 --VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 237
Query: 241 LGINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKK 300
LG+ V+V+ P +YDY FG YGKI EVA++I+ VGT EG++LDPVYTGKAFYGL+DLA+K
Sbjct: 238 LGVKVEVR-PELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARK 296
Query: 301 GDLGESVLFIHTGGLPGIFHYGEEMLELL 329
G+LGE +LFIHTGG+ G FHYG+++L LL
Sbjct: 297 GELGEKILFIHTGGISGTFHYGDKLLSLL 325
>pir||C71224 probable 1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.99.4)
PH0054 [similarity] - Pyrococcus horikoshii
>gi|3256439|dbj|BAA29122.1| (AP000001) 328aa long
hypothetical 1-aminocyclopropane-1-carboxylate deaminase
[Pyrococcus horikoshii]
Length = 328
Score = 467 bits (1188), Expect = e-130
Identities = 223/329 (67%), Positives = 276/329 (83%), Gaps = 4/329 (1%)
Query: 1 MHPKVDALLSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEF 60
MHPK+ ALL++FPR+ LIPWETPIQYLP ISRE+G DVY+KRDDLTGLGIGGNKIRKLE+
Sbjct: 4 MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEY 63
Query: 61 LLGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLKGNYLLDKLMGI 120
LLGDALS+G D VIT+GAVHSNHAFVT LAAKKLGL A+L+LRG+E LKGNYLLDK+MGI
Sbjct: 64 LLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGI 123
Query: 121 ETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKK 180
ETR+Y+A +S+ELMK AEE+AEELK EG+KPY+IPPGGASP+GTLGY+R VGE+ TQ +
Sbjct: 124 ETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSE- 182
Query: 181 LGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKEL 240
++ D++V A GSGGT AGL LG +I+N + VGI V E ++ NL+++ EL
Sbjct: 183 --VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAEL 240
Query: 241 LGINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKK 300
LG+ V+V+ P +YDY FG YGKI EVA++I+ VGT EG++LDPVYTGKAFYGL+DLA+K
Sbjct: 241 LGVKVEVR-PELYDYSFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARK 299
Query: 301 GDLGESVLFIHTGGLPGIFHYGEEMLELL 329
G+LGE +LFIHTGG+ G FHYG+++L LL
Sbjct: 300 GELGEKILFIHTGGISGTFHYGDKLLSLL 328
>pir||D64955 probable 1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.99.4)
yedO [similarity] - Escherichia coli
>gi|1736578|dbj|BAA15739.1| (D90832)
1-aminocyclopropane-1-carboxylate deaminase (EC
4.1.99.4) (ACC deaminase). [Escherichia coli]
>gi|1736586|dbj|BAA15746.1| (D90833)
1-aminocyclopropane-1-carboxylate deaminase (EC
4.1.99.4) (ACC deaminase). [Escherichia coli]
>gi|1788227|gb|AAC74986.1| (AE000284) putative
1-aminocyclopropane-1-carboxylate deaminase [Escherichia
coli K12]
Length = 360
Score = 213 bits (538), Expect = 2e-54
Identities = 129/322 (40%), Positives = 184/322 (57%), Gaps = 12/322 (3%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEFLLGDALSR 68
L+RFPR+ I TP++YLPR S LG ++++KRDD+T + +GGNK+RKLEFL DAL
Sbjct: 38 LTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALRE 97
Query: 69 GCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRG-------EEVLKGNYLLDKLMGIE 121
G DT+IT GA+ SNH TA A KLGL V +L + GN LL L
Sbjct: 98 GADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDL--FN 155
Query: 122 TRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKKL 181
T+I D + EE+A ++ +G +PY+IP GG++ +G LGY+ E+ Q +
Sbjct: 156 TQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEG- 214
Query: 182 GLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKELL 241
+ I +VV A GS GT+AGL +G + E ++G+ VS + +V NL + + L
Sbjct: 215 AVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKEL 274
Query: 242 GINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMD-LAKK 300
+ + DY YG E + +K + +EG+LLDPVYTGKA GL+D +++K
Sbjct: 275 ELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQK 334
Query: 301 GDLGES-VLFIHTGGLPGIFHY 321
E +LFIHTGG P +F Y
Sbjct: 335 RFKDEGPILFIHTGGAPALFAY 356
>sp|P76316|1A1D_ECOLI PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC
DEAMINASE)
Length = 328
Score = 213 bits (538), Expect = 2e-54
Identities = 129/322 (40%), Positives = 184/322 (57%), Gaps = 12/322 (3%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEFLLGDALSR 68
L+RFPR+ I TP++YLPR S LG ++++KRDD+T + +GGNK+RKLEFL DAL
Sbjct: 6 LTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALRE 65
Query: 69 GCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRG-------EEVLKGNYLLDKLMGIE 121
G DT+IT GA+ SNH TA A KLGL V +L + GN LL L
Sbjct: 66 GADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDL--FN 123
Query: 122 TRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKKL 181
T+I D + EE+A ++ +G +PY+IP GG++ +G LGY+ E+ Q +
Sbjct: 124 TQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEG- 182
Query: 182 GLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKTKELL 241
+ I +VV A GS GT+AGL +G + E ++G+ VS + +V NL + + L
Sbjct: 183 AVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKEL 242
Query: 242 GINVKVQEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMD-LAKK 300
+ + DY YG E + +K + +EG+LLDPVYTGKA GL+D +++K
Sbjct: 243 ELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQK 302
Query: 301 GDLGES-VLFIHTGGLPGIFHY 321
E +LFIHTGG P +F Y
Sbjct: 303 RFKDEGPILFIHTGGAPALFAY 324
>sp|Q9WY68|1A1D_THEMA PUTATIVE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC
DEAMINASE) >gi|7449749|pir||D72401 probable
1-aminocyclopropane-1-carboxylate deaminase (EC
4.1.99.4) TM0225 [similarity] - Thermotoga maritima
(strain MSB8) >gi|4980724|gb|AAD35317.1|AE001707_4
(AE001707) 1-aminocyclopropane-1-carboxylate deaminase,
putative [Thermotoga maritima]
Length = 312
Score = 208 bits (524), Expect = 7e-53
Identities = 129/312 (41%), Positives = 191/312 (60%), Gaps = 14/312 (4%)
Query: 14 RITLIPWETPIQYLPRISRELGVDVYVKRDDLTGLGIGGNKIRKLEFLLGDALSRGCDTV 73
RI L TP+Q+L R+S + G ++YVKRDDLT L GNKIRKLE+LL +AL +G TV
Sbjct: 2 RIDLSLKPTPVQFLKRLSEKYGFNIYVKRDDLTELVGSGNKIRKLEYLLWEALKKGATTV 61
Query: 74 ITIGAVHSNHAFVTALAAKKLGLGAVLILR-GEEVLKGNYLLDKLMG---IETRIYEADN 129
T G + SNHA TA +++ GL VL LR GE+VL GN LLD L+G +E E +
Sbjct: 62 FTCGGLQSNHARATAYVSRRYGLKPVLFLRKGEKVLNGNLLLDILLGAEIVEVSPEEYER 121
Query: 130 SWELMKVAEEVAEELKGEGKKPYIIPPGGASPVGTLGYIRGVGELYTQVKKLGLRIDTVV 189
E+ V +++ E+ +G+K Y+IP GG++ +G GY V E+ Q+ D +V
Sbjct: 122 IDEIFDVHKKMREK---KGEKVYVIPEGGSNSLGAFGYFNAVLEMKDQLNLES--FDAIV 176
Query: 190 DAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSA-TEKAKERVKNLVEKTKEL-LGINVKV 247
AVGSGGT AGL G + + VVG++V++ ++ +VK ++ +E L +N V
Sbjct: 177 CAVGSGGTIAGLSAGISFLEYHVPVVGVNVTTKNSDYFVGKVKRIISGMEEYGLRVNETV 236
Query: 248 QEPRIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKKGDLGESV 307
E + DY Y E +++K V ++EG++LDPVYT KAF G++++ + + ++V
Sbjct: 237 FEV-VDDYRGPGYAIPSSEDVEILKEVASIEGIILDPVYTAKAFRGMIEMFRNSE--KNV 293
Query: 308 LFIHTGGLPGIF 319
LFIHTGG+ G+F
Sbjct: 294 LFIHTGGIFGLF 305
>pir||T50268 probable 1-aminocyclopropane-1-carboxylate deaminase [imported] -
fission yeast (Schizosaccharomyces pombe)
>gi|6594237|emb|CAB63550.1| (AL133522) probable
1-aminocyclopropane-1-carboxylate deaminase
[Schizosaccharomyces pombe]
Length = 338
Score = 191 bits (481), Expect = 8e-48
Identities = 115/329 (34%), Positives = 180/329 (53%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L +F + L TPI + R+S+ LG V+++ KR+D +GL GGNKIRKLE+L+ +A
Sbjct: 3 LEQFKKYPLTFGPTPITSMKRLSKTLGGKVEIFAKREDCNSGLAFGGNKIRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRGEEVLK-------GNYLLDKLM 118
+ G DT+++IG + SN A A LGL VLI K GN L +++
Sbjct: 63 IDGGYDTLVSIGGIQSNQTRQVAAVAAHLGLDCVLIQEDWVDYKDTMYDRVGNIELSRIV 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGAS-PVGTLGYIRGVGELYTQ 177
+ R+ + + + EEL +GKKP+ IP G + P G LG++ V E+Y Q
Sbjct: 123 NADVRLDSSKFDIGIRPSFKNALEELTKKGKKPFPIPAGCSEHPYGGLGFVGCVEEIYEQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
K+LG + D +V +G ++AG+++G A+ + V+GID S+ EK K +V + + T
Sbjct: 183 EKQLGFKFDKIVVCTVTGSSFAGIIVGMALTGRQKDVIGIDASATPEKTKAQVLRIAQNT 242
Query: 238 KELLGINVKVQEPRI---YDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
+L+G+ ++ E + + AYG + + IK G EG+L DPVY GK+ GL
Sbjct: 243 AKLIGLEKELTESDVNIDTRFAHPAYGIPNEGTIEAIKLCGATEGVLTDPVYEGKSMQGL 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+ L + ++ G VL+IH GG P + Y
Sbjct: 303 IHLVRNNEIAEGSKVLYIHLGGAPALSAY 331
>dbj|BAA92150.1| (AB038511) ACC deaminase [Penicillium citrinum]
Length = 360
Score = 185 bits (466), Expect = 5e-46
Identities = 119/342 (34%), Positives = 183/342 (52%), Gaps = 29/342 (8%)
Query: 10 SRFPRITLIPWETPIQYLPRISRELG-------VDVYVKRDDL-TGLGIGGNKIRKLEFL 61
S PR L+ +PI LPR + +L V +Y KRDDL +G GGNK RKLE+L
Sbjct: 14 STIPRTPLLLGPSPIHPLPRTTADLAKNNPHPLVTIYAKRDDLNSGYAYGGNKTRKLEYL 73
Query: 62 LGDALSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR--------GEEVLKGNYL 113
L DA ++GC T+++IG V SNH A A + GL A L+ G E GN
Sbjct: 74 LADAQAQGCTTLVSIGGVQSNHTRQVAAVAARSGLKARLVQEHWVDWTDPGYE-STGNIQ 132
Query: 114 LDKLMGIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGAS-PVGTLGYIRGVG 172
L +LMG + R+ + E + V EE +G+G+KPY IP G + P+G LG+ R
Sbjct: 133 LSRLMGADVRLDPSGFGIEHKNTVQRVVEEARGDGEKPYYIPAGASDHPLGGLGFARWAF 192
Query: 173 ELYTQVKKLGLRIDTVVDAVGSGGTYAGLLLGSAIV------NAEWSVVGIDVSSATEKA 226
E+ Q ++G+ DTV+ +G T+AG++ G ++ +A+ VVGID S+ E
Sbjct: 193 EVREQEGEMGVFFDTVLVCAVTGSTFAGMIAGFKLLERLYPADAKRRVVGIDASATVEAT 252
Query: 227 KERVKNLVEKTKELLGI---NVKVQEPRIYD-YGFGAYGKIVKEVAKLIKSVGTMEGLLL 282
+ +V + + T +G+ ++ + + D Y G YG ++ I+ ME +
Sbjct: 253 RAQVLRIAKNTAAKIGLSEDDITEDDVMLDDRYHAGIYGVPDRQTWDAIEYAAKMEAFIT 312
Query: 283 DPVYTGKAFYGLMDLAKKGDL-GESVLFIHTGGLPGIFHYGE 323
DPVY GK+F G+MD+ ++G++ G ++L+ H GG + Y E
Sbjct: 313 DPVYEGKSFAGMMDMIRRGEIKGGNILYAHLGGQLALNAYSE 354
>sp|Q51813|1A1D_PSEFL 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC DEAMINASE)
>gi|1439548|gb|AAC44163.1| (U37103)
1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas
fluorescens]
Length = 338
Score = 181 bits (455), Expect = 9e-45
Identities = 110/329 (33%), Positives = 178/329 (53%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L+RF R L +PI L R+S LG V++Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LNRFKRYPLTFGPSPITPLKRLSEHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
L +GCDT+++IG + SN A A LG+ VL+ + V GN + ++M
Sbjct: 63 LEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIM 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPG-GASPVGTLGYIRGVGELYTQ 177
G + R+ A + E+ ++ G KP+ IP G P G LG++ E+ Q
Sbjct: 123 GADVRLDAAGFDIGIRPSWEKAMNDVVERGGKPFPIPAGCSEHPYGGLGFVGFAEEVREQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
K+LG + D +V +G T AG+++G A +V+GID S+ EK K ++ + T
Sbjct: 183 EKQLGFKFDYIVVCSVTGSTQAGMVVGFAADGRSKNVIGIDASAKPEKTKAQILRIARHT 242
Query: 238 KELLGINVKVQEPRIY---DYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
EL+ + ++ E + + + YG + + I+ G++EG+L DPVY GK+ +G+
Sbjct: 243 AELVELGREITEDDVVLDTPFAYPEYGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ ++G+ G VL+ H GG P + Y
Sbjct: 303 IEMVRRGEFPEGSKVLYAHLGGAPALNAY 331
>sp|P30297|1A1D_PSES0 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC DEAMINASE)
>gi|77790|pir||JQ1330 1-aminocyclopropane-1-carboxylate
deaminase (EC 4.1.99.4) [validated] - Pseudomonas sp
>gi|150965|gb|AAA73153.1| (M80882) [Pseudomonas strain
6G5 1-aminocyclopropane-1-carboxylate deaminase gene,
complete cds.], gene product [Pseudomonas sp.]
Length = 338
Score = 180 bits (451), Expect = 3e-44
Identities = 108/329 (32%), Positives = 180/329 (53%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L+RF R L +PI L R+S+ LG V++Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LNRFERYPLTFGPSPITPLKRLSQHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
+ +GCDT+++IG + SN A A LG+ VL+ + V GN + ++M
Sbjct: 63 IEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIM 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPG-GASPVGTLGYIRGVGELYTQ 177
G + R+ A + E+ ++ +G KP+ IP G P G LG++ E+ Q
Sbjct: 123 GADVRLDAAGFDIGIRPSWEKAMSDVVEQGGKPFPIPAGCSEHPYGGLGFVGFAEEVRQQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
K+LG + D +V +G T AG+++G A +V+GID S+ E+ K ++ + T
Sbjct: 183 EKELGFKFDYIVVCSVTGSTQAGMVVGFAADGRSKNVIGIDASAKPEQTKAQILRIARHT 242
Query: 238 KELLGINVKVQEPRIY---DYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
EL+ + ++ E + + + YG + + I+ G++EG+L DPVY GK+ +G+
Sbjct: 243 AELVELGREITEEDVVLDTRFAYPEYGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ ++G+ G VL+ H GG P + Y
Sbjct: 303 IEMVRRGEFPEGSKVLYAHLGGAPALNAY 331
>sp|Q00740|1A1D_PSESP 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC DEAMINASE)
>gi|150963|gb|AAA25689.1| (M73488)
1-aminocyclopropane-1-carboxylate deaminase [Pseudomonas
sp.]
Length = 338
Score = 180 bits (451), Expect = 3e-44
Identities = 110/329 (33%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L RFPR L TPIQ L R+S+ LG V +Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
L++GCDT+++IG + SN A A LG+ VL+ + V GN + +++
Sbjct: 63 LAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRIL 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGAS-PVGTLGYIRGVGELYTQ 177
G + R+ + E+ E ++ G KPY IP G + P+G LG++ E+ Q
Sbjct: 123 GADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
+LG + D VV +G T AG+++G A V+G+D S+ + +E++ + +T
Sbjct: 183 EAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQITRIARQT 242
Query: 238 KELLGINVKVQEPR-IYDYGFGA--YGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
E +G+ + + D F YG + + I+ EG+L DPVY GK+ +G+
Sbjct: 243 AEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ + G+ G VL+ H GG+P + Y
Sbjct: 303 IEMVRNGEFPEGSRVLYAHLGGVPALNGY 331
>gb|AAF85968.1| (AF274585) ACC deaminase [synthetic construct]
Length = 338
Score = 180 bits (451), Expect = 3e-44
Identities = 110/329 (33%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L RFPR L TPIQ L R+S+ LG V +Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
L++GCDT+++IG + SN A A LG+ VL+ + V GN + +++
Sbjct: 63 LAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRIL 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGAS-PVGTLGYIRGVGELYTQ 177
G + R+ + E+ E ++ G KPY IP G + P+G LG++ E+ Q
Sbjct: 123 GADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
+LG + D VV +G T AG+++G A V+G+D S+ + +E++ + +T
Sbjct: 183 EAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQITRIARQT 242
Query: 238 KELLGINVKVQEPR-IYDYGFGA--YGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
E +G+ + + D F YG + + I+ EG+L DPVY GK+ +G+
Sbjct: 243 AEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ + G+ G VL+ H GG+P + Y
Sbjct: 303 IEMVRNGEFPEGSRVLYAHLGGVPALNGY 331
>gb|AAD05069.1| (AF047710) 1-aminocyclopropane-1-carboxylate deaminase; ACC
deaminase; ACCd [Enterobacter cloacae]
Length = 338
Score = 178 bits (448), Expect = 6e-44
Identities = 108/329 (32%), Positives = 177/329 (52%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L+RF R L +PI L R+S LG V++Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LNRFERYPLTFGPSPITPLKRLSEHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
+ +GCDT+++IG + SN A A LG+ VL+ + V GN + ++M
Sbjct: 63 IEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIM 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPG-GASPVGTLGYIRGVGELYTQ 177
G + R+ A + E+ ++ G KP+ IP G P G LG++ EL Q
Sbjct: 123 GADVRLDAAGFDIGIRPSWEKAMSDVVERGGKPFPIPAGCSEHPYGGLGFVGFAKELRQQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
K LG + D +V +G T AG+++G A +V+G+D S+ E+ K ++ + T
Sbjct: 183 EKDLGFKFDYIVVCSVTGSTQAGMVVGFAADGRSKNVIGVDASAKPEQTKAQILRIARHT 242
Query: 238 KELLGINVKVQEPRIY---DYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
EL+ + ++ E + + + YG + + I+ G++EG+L DPVY GK+ +G+
Sbjct: 243 AELVELGREITEEDVVLDTRFAYPEYGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ ++G+ G VL+ H GG P + Y
Sbjct: 303 IEMVRRGEFPDGSKVLYAHLGGAPALNAY 331
>sp|Q9ZHW3|1A1D_ENTCL 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE (ACC DEAMINASE)
>gi|4105594|gb|AAD05070.1| (AF047840)
1-aminocyclopropane-1-carboxylate deaminase; ACC
deaminase; ACCd [Enterobacter cloacae]
Length = 338
Score = 177 bits (444), Expect = 2e-43
Identities = 106/329 (32%), Positives = 180/329 (54%), Gaps = 16/329 (4%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
L+RF R L +PI L R+S+ LG V++Y KR+D +GL GGNK RKLE+L+ +A
Sbjct: 3 LNRFERYPLTFGPSPITPLKRLSQHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEA 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILR-----GEEVLK--GNYLLDKLM 118
+ +GCDT+++IG + SN A A LG+ VL+ + V GN + ++M
Sbjct: 63 IEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIM 122
Query: 119 GIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPG-GASPVGTLGYIRGVGELYTQ 177
G + R+ A + E+ ++ +G KP+ IP G P G LG++ +L Q
Sbjct: 123 GADVRLDAAGFDIGIRPSWEKAMSDVVEQGGKPFPIPAGCSEHPYGGLGFVGFAKKLRQQ 182
Query: 178 VKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLVEKT 237
K+LG + + +V +G T AG+++G A +V+G+D S+ E+ K ++ + T
Sbjct: 183 EKELGFKFNYIVVCSVTGSTQAGMVVGFAADGRSKNVIGVDASAKPEQTKAQILRIARHT 242
Query: 238 KELLGINVKVQEPRIY---DYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGL 294
EL+ + ++ E + + + YG + + I+ G++EG+L DPVY GK+ +G+
Sbjct: 243 AELVELGREITEEDVVLDTRFAYPEYGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGM 302
Query: 295 MDLAKKGDL--GESVLFIHTGGLPGIFHY 321
+++ ++G+ G VL+ H GG P + Y
Sbjct: 303 IEMVRRGEFPEGSKVLYAHLGGAPALNAY 331
>gb|AAF79717.1|AC020889_25 (AC020889) T1N15.3 [Arabidopsis thaliana]
>gi|8778956|gb|AAD49754.2|AC007932_2 (AC007932) Contains
similarity to 1-aminocyclopropane-1-carboxylate
deaminase from Pseudomonas gb|M73488. ESTs gb|Z18033
and gb|Z34214 come from this gene. [Arabidopsis
thaliana]
Length = 414
Score = 175 bits (438), Expect = 9e-43
Identities = 113/322 (35%), Positives = 176/322 (54%), Gaps = 30/322 (9%)
Query: 35 GVDVYVKRDDLTGLGIGGNKIRKLEFLLGDALSRGCDTVITIGAVHSNHAFVTALAAKKL 94
G ++++KRDD TG+ + GNK+RKLEFL+ +A+ + DTVITIG + SNH TA A+ L
Sbjct: 74 GTELWIKRDDFTGMELSGNKVRKLEFLMAEAVDQHADTVITIGGIQSNHCRATATASNYL 133
Query: 95 GLGAVLILRGEEVLK-------GNYLLDKLMGIETRIYEADNSWELMKVA--EEVAEELK 145
L + LILR ++L GN L+++L+G + + + A + E+L+
Sbjct: 134 NLNSHLILRTSKLLADEDPGLVGNLLVERLVGANVHLISKEEYSSIGSEALTNALKEKLE 193
Query: 146 GEGKKPYIIPPGGASPVGTLGYIRGVGELYTQV--KKLGLRIDTVVDAVGSGGTYAGLLL 203
EGKKPY+IP GG++ +GT GYI E+ Q+ + L+ D +V A GSGGT AG+ L
Sbjct: 194 KEGKKPYVIPVGGSNSLGTWGYIEAAREIEEQLNYRPDDLKFDDIVVACGSGGTIAGISL 253
Query: 204 GSAI--VNAEWS-----------VVGIDVSSATEKAKERVKNLVEKTKELLGINVKVQEP 250
GS + + A+ + V V + + V+ L++ G+N +
Sbjct: 254 GSWLGALKAKLTDGSVKFPFIVQVHAFSVCDDPDYFYDFVQGLLDGLHA--GVNSR-DIV 310
Query: 251 RIYDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLMDLAKKGDL---GESV 307
I++ Y E + +K V + G++LDPVY+GKA YGL++ K G +
Sbjct: 311 NIHNAKGKGYAMNTSEELEFVKKVASSTGVILDPVYSGKAAYGLINEITKDPKCWEGRKI 370
Query: 308 LFIHTGGLPGIFHYGEEMLELL 329
LFIHTGGL G++ ++M L+
Sbjct: 371 LFIHTGGLLGLYDKVDQMASLM 392
>pir||PW0041 1-aminocyclopropane-1-carboxylate deaminase (EC 4.1.99.4)
[validated] - yeast (Hansenula saturnus) (fragment)
Length = 341
Score = 161 bits (404), Expect = 9e-39
Identities = 107/330 (32%), Positives = 171/330 (51%), Gaps = 17/330 (5%)
Query: 9 LSRFPRITLIPWETPIQYLPRISRELG--VDVYVKRDDL-TGLGIGGNKIRKLEFLLGDA 65
+++F + L +PI L R+S+ LG V+VY KR+D +GL GGNK+RKLE+++ D
Sbjct: 3 VAKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDI 62
Query: 66 LSRGCDTVITIGAVHSNHAFVTALAAKKLGLGAVLILRG--------EEVLK--GNYLLD 115
+ +++IG SN + A A KLG VLI ++V GN L
Sbjct: 63 VEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELS 122
Query: 116 KLMGIETRIYEADNSWELMKVAEEVAEELKGEGKKPYIIPPGGAS-PVGTLGYIRGVGEL 174
++MG + R+ E + K +EL+ G KPY IP G + G LG++ E+
Sbjct: 123 RIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEV 182
Query: 175 YTQVKKLGLRIDTVVDAVGSGGTYAGLLLGSAIVNAEWSVVGIDVSSATEKAKERVKNLV 234
Q +LG++ D +V +G T AG+L G A + V+ ID S +EK KE+ +
Sbjct: 183 INQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIA 242
Query: 235 EKTKELLGINVKVQEPRI-YDYGFGAYGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYG 293
T +L+G+ + ++ + + + YG + + I++ EG+L DPVY GK+ G
Sbjct: 243 NNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQG 302
Query: 294 LMDLAKKGDL--GESVLFIHTGGLPGIFHY 321
L+ L K+ G +VL++H GG P + Y
Sbjct: 303 LIALIKEDYFKPGANVLYVHLGGAPALSAY 332
>emb|CAC05972.1| (AL391763) putative deaminase [Streptomyces coelicolor]
Length = 302
Score = 75.7 bits (183), Expect = 7e-13
Identities = 60/173 (34%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 35 GVDVYVKRDDLTGLGIGGNKIRKLEFLLGDALSRGCDTVITIGAVHSNHAFVTALAAKKL 94
GV + +KRDDL + GNK RKL L A R TV+T G +SNH A A + L
Sbjct: 32 GVRLLLKRDDLIHPELVGNKWRKLAPNLATADGR---TVVTFGGAYSNHLRAAAAAGRLL 88
Query: 95 GLGAVLILRGEEV--LKGNYLLDKLMGIETRIYEADNS-WELMKVAEEVAEELKGEGKKP 151
GL V ++RG+E+ L N L + R++ D S + E +A L+ G +
Sbjct: 89 GLPTVGVVRGQELAGLPLNPSLARCAADGMRLHFVDRSTYRRKSEPETLAALLRAAGAEG 148
Query: 152 YIIPPGGASPVGTLGYIRGVGELYTQVKKLGLRIDTVVDAVGSGGTYAGLLLG 204
++ P G S + R +GE +LG D A G+GGT AGL G
Sbjct: 149 AVVVPEGGSNADAVRGCRALGE------ELGTHADVAAVACGTGGTLAGLAAG 195
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.142 0.406
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125953852
Number of Sequences: 2977
Number of extensions: 5539097
Number of successful extensions: 15240
Number of sequences better than 1.0e-10: 17
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 15163
Number of HSP's gapped (non-prelim): 19
length of query: 330
length of database: 189,106,746
effective HSP length: 55
effective length of query: 275
effective length of database: 156,189,961
effective search space: 42952239275
effective search space used: 42952239275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 165 (68.7 bits)