BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2326 (PAB2326) DE:Hypothetical protein
(336 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75189 hypothetical protein PAB2326 - Pyrococcus abyssi (st... 663 0.0
pir||G71221 hypothetical protein PH0034 - Pyrococcus horikoshii ... 557 e-158
gb|AAK42383.1| Conserved hypothetical protein [Sulfolobus solfat... 269 4e-71
pir||A69057 conserved hypothetical protein MTH1426 - Methanobact... 264 9e-70
gi|11497892 conserved hypothetical protein [Archaeoglobus fulgid... 259 3e-68
pir||G72506 hypothetical protein APE2029 - Aeropyrum pernix (str... 224 1e-57
emb|CAC11226.1| (AL445063) conserved hypothetical protein [Therm... 193 3e-48
pir||E64499 hypothetical protein MJ1598 - Methanococcus jannasch... 191 1e-47
gb|AAG19849.1| (AE005069) Vng1572c [Halobacterium sp. NRC-1] 178 8e-44
pir||S74983 hypothetical protein sll1500 - Synechocystis sp. (st... 146 3e-34
>pir||B75189 hypothetical protein PAB2326 - Pyrococcus abyssi (strain Orsay)
>gi|5457470|emb|CAB48961.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 336
Score = 663 bits (1693), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHP 60
MESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHP
Sbjct: 1 MESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHP 60
Query: 61 TPAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAK 120
TPAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAK
Sbjct: 61 TPAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAK 120
Query: 121 LFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGF 180
LFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGF
Sbjct: 121 LFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGF 180
Query: 181 NRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGE 240
NRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGE
Sbjct: 181 NRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGE 240
Query: 241 DMKRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVG 300
DMKRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVG
Sbjct: 241 DMKRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVG 300
Query: 301 AGGATWLAVKSGFSPEDVSEKVEELYERLMRMKSLT 336
AGGATWLAVKSGFSPEDVSEKVEELYERLMRMKSLT
Sbjct: 301 AGGATWLAVKSGFSPEDVSEKVEELYERLMRMKSLT 336
>pir||G71221 hypothetical protein PH0034 - Pyrococcus horikoshii
>gi|3256419|dbj|BAA29102.1| (AP000001) 335aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 335
Score = 557 bits (1420), Expect = e-158
Identities = 275/333 (82%), Positives = 309/333 (92%), Gaps = 1/333 (0%)
Query: 1 MESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHP 60
++SLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLF+EKPLTID IPVTPEGHP
Sbjct: 4 VKSLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFYEKPLTIDTIPVTPEGHP 63
Query: 61 TPAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAK 120
TPAIITKAA+EL++FPI+V+RGGTYLAPL+PHVHIS+VVGRDFR+E ALPE II+RAK
Sbjct: 64 TPAIITKAARELSNFPILVVRGGTYLAPLIPHVHISNVVGRDFRREPALPEVEVIIERAK 123
Query: 121 LFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGF 180
L G+EL K+ E+VIGESTPGGTTTAQA+LWALGYEA+TSSASP NPQELKE+VI EGF
Sbjct: 124 LLGKELEKIA-NEIVIGESTPGGTTTAQAILWALGYEAKTSSASPENPQELKEKVIKEGF 182
Query: 181 NRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGE 240
R GIEKG L +KPLEAL++FGDPMIATV+GLSLGF D+VLAGGTQMLAVSA+LK+LGE
Sbjct: 183 KRVGIEKGGLKDKPLEALKEFGDPMIATVLGLSLGFGGDVVLAGGTQMLAVSALLKSLGE 242
Query: 241 DMKRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVG 300
D+ RFMIATTRWVV D SATF+ETAREIGII+Y A+LDFS SKFKGLRDYERGYVKEGVG
Sbjct: 243 DLSRFMIATTRWVVEDPSATFIETAREIGIISYVAELDFSKSKFKGLRDYERGYVKEGVG 302
Query: 301 AGGATWLAVKSGFSPEDVSEKVEELYERLMRMK 333
AGGATWLAVK+G+SPEDVS+KVEELYERLM ++
Sbjct: 303 AGGATWLAVKAGYSPEDVSKKVEELYERLMGLR 335
>gb|AAK42383.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 347
Score = 269 bits (680), Expect = 4e-71
Identities = 144/335 (42%), Positives = 215/335 (63%), Gaps = 12/335 (3%)
Query: 5 FLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHPTPAI 64
++LV+G T++S IPG+++AGATPELT TP ADAEY+ K +I+ IPV+P G PTPA+
Sbjct: 19 YILVIGTTDVSLIPGLTIAGATPELTHFTPAADAEYVILGKCKSINTIPVSPTGIPTPAL 78
Query: 65 ITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKE-IALPEFGEIIKRAKLFG 123
+T+A+ IV+ G+ + P +P++ + G+D RK+ +++ + II+ G
Sbjct: 79 LTRASLSFTKSLKIVVNAGSRITPKIPYIDLQGEPGKDIRKQALSIEKVNIIIENGIKLG 138
Query: 124 EELNKLPIKELVIGESTPGGTTTAQAVLWALGYEA--RTSSASPNNPQELKERVIMEGFN 181
EEL+ + ++IGES P GTTTA A L ALGY+A + SSASP+NP+ELK +V+ E
Sbjct: 139 EELSN-EYELIMIGESIPAGTTTAMATLLALGYDAMDKVSSASPDNPKELKRKVVEEALR 197
Query: 182 RAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGED 241
L PL+ L + DP++ V G+SLGFR I+LAGGTQM A +AI+ +
Sbjct: 198 -------NLPTDPLQRLAKVSDPVLLGVAGISLGFRGKILLAGGTQMTAAAAIVNEFDKS 250
Query: 242 -MKRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVG 300
+K +I TT+W+V D+SA + A+++G+ ++ LD S S +G+R YE+GYVKEGVG
Sbjct: 251 KLKDIIIGTTKWIVEDKSADMLSLAKQVGVKVLASMLDLSISIHEGIRTYEKGYVKEGVG 310
Query: 301 AGGATWLAVKSGFSPEDVSEKVEELYERLMRMKSL 335
AGG+T +A G S + K++ELY L+ +L
Sbjct: 311 AGGSTIMAFIRGVSNSTLVRKIDELYSELVGSNNL 345
>pir||A69057 conserved hypothetical protein MTH1426 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622539|gb|AAB85903.1| (AE000904) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 359
Score = 264 bits (668), Expect = 9e-70
Identities = 152/337 (45%), Positives = 204/337 (60%), Gaps = 9/337 (2%)
Query: 2 ESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVT---PEG 58
+SLF+ + TE S IPGI+ AGA+PELT+ TP AD E + H+ P + IP T E
Sbjct: 23 DSLFICAVATTETSRIPGITGAGASPELTEYTPAADVELIVHDAPRCLPEIPQTIVEGEA 82
Query: 59 HPTPAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKR 118
PTPA+ITKAA ELA+ P +V G + P VP+++I+ G D R A+ E I +R
Sbjct: 83 APTPAVITKAALELAEVPFMVADAGASVKPDVPYININSEPGGDIRTGRAVTEPQRIYER 142
Query: 119 AKLFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEA--RTSSASPNNPQELKERVI 176
+ G L+ L + LV+GESTP GTTTA VL ALGY+A R S++ P+NP +LK V+
Sbjct: 143 GLMVGRTLSSLT-EHLVVGESTPAGTTTALGVLTALGYDADFRVSASMPHNPHDLKREVV 201
Query: 177 MEGFNRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILK 236
M G + AGIEKG S +P A+ GDPMI V G+ +G + LAGGTQM AV A+++
Sbjct: 202 MAGLSNAGIEKGDCSREPFRAVEAVGDPMIPAVAGICMGSTVPVTLAGGTQMTAVCALMR 261
Query: 237 ALGE--DMKRFMIATTRWVVNDRSATFVETAREIG-IITYSADLDFSNSKFKGLRDYERG 293
A+ D IATT +V D ++ A +IG I Y D DF ++ +GL +Y G
Sbjct: 262 AIDPDFDFSDTAIATTIFVAEDSTSDINRIAEQIGDIDIYVVDPDFGSASHRGLHEYLNG 321
Query: 294 YVKEGVGAGGATWLAVKSGFSPEDVSEKVEELYERLM 330
VKEGVGAGGA LA+ G E V E++EEL ++
Sbjct: 322 SVKEGVGAGGAMLLALLHGIPVEMVRERIEELCNTIL 358
>gi|11497892 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450038|pir||D69284 conserved hypothetical protein
AF0276 - Archaeoglobus fulgidus
>gi|2650360|gb|AAB90956.1| (AE001086) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 337
Score = 259 bits (655), Expect = 3e-68
Identities = 142/328 (43%), Positives = 205/328 (62%), Gaps = 15/328 (4%)
Query: 5 FLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHPTPAI 64
F+LV+GNT+ + I GI+VAGA PEL K TP ADAE L+H K L+ID +P TP+G PTPA+
Sbjct: 22 FVLVIGNTKTANIEGITVAGANPELIKYTPPADAELLYHGKCLSIDGVPATPDGKPTPAL 81
Query: 65 ITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIAL--PEFGEIIKRAKLF 122
IT A L P+ V+ G + P +P++ ++ VG + + A+ + E+++RAK+
Sbjct: 82 ITYTALRLTSIPLFVVNSGLMVPPKIPYIDLNAPVGENIAESRAMDREKVEEVLERAKIV 141
Query: 123 GEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGFNR 182
G +L+KL L+IGES P GTTTA AVL ALG A SS+ P NP ELK +V+ R
Sbjct: 142 GRQLSKLS-DVLIIGESIPAGTTTAAAVLKALGLNAAVSSSMPENPVELKRKVVERAVER 200
Query: 183 AGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKDIVLAGGTQMLAVSAILKALGEDM 242
S P+E L GDP++ V G++LG K ++LAGGTQM+A++ ++ +GE
Sbjct: 201 VE------SNDPIEVLSAVGDPVMVGVAGIALGSEKPVILAGGTQMVAIANLIARMGE-- 252
Query: 243 KRFMIATTRWVVNDRSATFVETAREIGIITYSADLDFSNSKFKGLRDYERGYVKEGVGAG 302
+IATT++V +D +A + + ++D S++ GLR YE G+VKEGVGAG
Sbjct: 253 VEAVIATTKYVASDATADLSLSPFPV----IASDPMLGKSRYPGLRAYEEGFVKEGVGAG 308
Query: 303 GATWLAVKSGFSPEDVSEKVEELYERLM 330
G T +A G +PE E+VE+ YER++
Sbjct: 309 GMTSVAYARGITPEKFLEEVEKDYERIV 336
>pir||G72506 hypothetical protein APE2029 - Aeropyrum pernix (strain K1)
>gi|5105727|dbj|BAA81039.1| (AP000063) 387aa long
hypothetical protein [Aeropyrum pernix]
Length = 387
Score = 224 bits (564), Expect = 1e-57
Identities = 135/340 (39%), Positives = 197/340 (57%), Gaps = 15/340 (4%)
Query: 2 ESLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHPT 61
+ + +V G+T STIPGIS+AG +PE T TP D EYL +PLT+D +PV+PEG PT
Sbjct: 50 KGVMAVVYGSTRTSTIPGISIAGPSPEATLYTPTLDIEYLVAGRPLTLDVVPVSPEGVPT 109
Query: 62 PAIITKAAKELADFPIIVIRGGTYLAPLVPHVHI-SDVVGRDFRKEIALPEFG--EIIKR 118
PA+IT+A + P++ + G++ VPH + S V G E LP + +
Sbjct: 110 PAVITRAVARAFNIPLLPVDAGSWTEARVPHAKLPSRVTGGRIDVEPGLPSGASERLFRE 169
Query: 119 AKLFGEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEAR--TSSASPNNPQELKERVI 176
A + G L + + + +GES PGGTT A AV+ ALGY A SS+ +NP+ELK+RV+
Sbjct: 170 AYMLGSSLAR-GLDWIAVGESIPGGTTVAAAVMEALGYRAADLVSSSGKDNPRELKKRVV 228
Query: 177 MEGFNRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKD---IVLAGGTQMLAVSA 233
+ +R E G + LE + GDP+ ++ GL++G R+ ++LAGGTQM AV A
Sbjct: 229 AQALSRLR-ECG--ARDVLEIVDCVGDPVHVSIAGLAVGAREAGAFVILAGGTQMGAVLA 285
Query: 234 ILKALGE-DMKRFMIATTRWVVNDRSATFVETAREI--GIITYSADLDFSNSKFKGLRDY 290
IL LG D + +ATT+W+ DR ++ I G+ +A S+++GLR Y
Sbjct: 286 ILSRLGMLDPRSTAVATTKWIALDRGSSIRGIVESIAPGLTVAAAGFSLEGSRYRGLRMY 345
Query: 291 ERGYVKEGVGAGGATWLAVKSGFSPEDVSEKVEELYERLM 330
E GY KEGVGAGG+ +++ G ++ E VE Y RL+
Sbjct: 346 EEGYAKEGVGAGGSLVISLLRGAGVREILEAVESEYGRLL 385
>emb|CAC11226.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 341
Score = 193 bits (485), Expect = 3e-48
Identities = 119/333 (35%), Positives = 187/333 (55%), Gaps = 17/333 (5%)
Query: 3 SLFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHPTP 62
++F+L+ G TE+S GI+ AGA+PE T+ITP DAE + K L+ P+TPEG PTP
Sbjct: 22 TIFVLIAGTTEVSLRSGITAAGASPEFTRITPTVDAEIIGEGKCLSTADPPMTPEGIPTP 81
Query: 63 AIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAKLF 122
AI+++A +L +++ GG + P RD + A+ E +++ +
Sbjct: 82 AIVSRAILDLTGLRSLIVNGGFSVRPKTAFFETYIEPSRDPGLDRAVMEAERVMEAGRRL 141
Query: 123 GEELNKLPIKELVIGESTPGGTTTAQAVLWALGYEARTSSASPNNPQELKERVIMEGFNR 182
G+ L+ K +++GES PGGTTTA VL +LG ++ TSS+ P +P LK++V E F R
Sbjct: 142 GKILDG-NFKNIILGESFPGGTTTAYVVLRSLGIDSGTSSSMPVDPDNLKKKVAEESFRR 200
Query: 183 AGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGFRKD-IVLAGGTQML-AVSAILKALGE 240
+ PLEA ++GD ++ ++GL+ R ++L GGTQM A + I K G
Sbjct: 201 RNV------RSPLEAATEYGDNLMIFMIGLAESIRSSKMILGGGTQMANAANLIAKVNGR 254
Query: 241 DMKRFMIATTRWVVNDRSATFVETAREIGIITYS--ADLDFSNSKFKGLRDYERGYVKEG 298
+ ++ATT+WV + RS F R +G+ S + +DF + GLR Y +G+V+EG
Sbjct: 255 TDQ--VVATTQWVFSHRSDLF----RILGLEDRSIISVMDFGRMRNNGLRLYNQGHVREG 308
Query: 299 VGAGGATWLAVKSGFSPEDVSEKVEELYERLMR 331
VG G A +GFS E++ +++ Y +R
Sbjct: 309 VGMGALYSYARIAGFSREEIESAIDDFYTTFLR 341
>pir||E64499 hypothetical protein MJ1598 - Methanococcus jannaschii
>gi|1500495|gb|AAB99619.1| (U67600) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 350
Score = 191 bits (480), Expect = 1e-47
Identities = 117/332 (35%), Positives = 178/332 (53%), Gaps = 17/332 (5%)
Query: 4 LFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDAIPVTPEGHPTPA 63
LF V+ + E T I ++G ++ K TP AD E +F+ K LT+ P+ G PTPA
Sbjct: 21 LFTCVISSIE--TTLSIPISGVHRDVIKYTPSADVELVFYGKSLTLKTPPIDATGSPTPA 78
Query: 64 IITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALPEFGEIIKRAKLFG 123
IT+A EL + + I G ++ P +P + I + + A+ E+ + L G
Sbjct: 79 TITRACVELKNIKNLHIDAGAFVKPKIPFIEIDEKPTGRIEEGKAMNNSKELYMKGYLLG 138
Query: 124 EELNKLPIKELVIGESTPGGTTTAQAVLWALGYEA--RTSSASPNNPQELKERVIMEGFN 181
+ L+ + L++GES PGGTTTA VL LGY+A + SS S NNP ELK +V+ EG
Sbjct: 139 KNLD---AELLIVGESVPGGTTTALGVLLGLGYDAEGKVSSGSINNPHELKIKVVREGLK 195
Query: 182 RAGIEKGQLSEKPLEALRQFGDPMIATVVGLSLGF---RKDIVLAGGTQMLAVSAILKAL 238
+AGI + + L GD M+ V GL++ F K ++LAGGTQM AV A++K +
Sbjct: 196 KAGINE---KSSVFDVLNAVGDKMMPVVAGLAISFAERNKPVILAGGTQMSAVLAVIKEI 252
Query: 239 GE---DMKRFMIATTRWVVNDRSATFVETAREIG-IITYSADLDFSNSKFKGLRDYERGY 294
+ D I TT +V+ND+ +IG + ++ F +K +GL++Y +G
Sbjct: 253 NKKVLDKNLIAIGTTEFVLNDKKGDLKGIVEQIGNVPVLASKFYFEKAKIEGLKNYCKGS 312
Query: 295 VKEGVGAGGATWLAVKSGFSPEDVSEKVEELY 326
VKEGVGAGG ++ + P + E +E +
Sbjct: 313 VKEGVGAGGIAVYSIVNDLEPTKIREFIENKF 344
>gb|AAG19849.1| (AE005069) Vng1572c [Halobacterium sp. NRC-1]
Length = 300
Score = 178 bits (447), Expect = 8e-44
Identities = 114/301 (37%), Positives = 158/301 (51%), Gaps = 8/301 (2%)
Query: 33 TPVADAEYLFHEKPLTIDAIPVTPEGHPTPAIITKAAKELADFPIIVIRGGTYLAPLVPH 92
TP ADAE L + + +PV+P G PTPA+IT+A +EL F +VI G P
Sbjct: 4 TPSADAELLTYGHTVRAPVVPVSPSGCPTPAVITRAVRELVGFESLVIDAGLAEPTGAPT 63
Query: 93 VHISDVVGRDFRKEIALPEFGEIIKRAKLFGEELNKLPIKELVIGESTPGGTTTAQAVLW 152
V G D R E +P+ A FG L+ ELVI E+ PGGTTTA VL
Sbjct: 64 VTTGISPGADIRDETPVPDAEAAYSAAYEFGHGLHT---DELVIAETIPGGTTTAMGVLA 120
Query: 153 ALGYEARTSSASPNNPQELKERVIMEGFNRAGIEKGQLSEKPLEALRQFGDPMIATVVGL 212
ALG SS+ PNNP LKERV+ + +G+E+G L+ +P+ A+RQ GDP++A V GL
Sbjct: 121 ALGEPRIVSSSLPNNPVALKERVVDDALAASGLEQGDLAGEPVAAVRQMGDPVLAVVAGL 180
Query: 213 SLGFRK---DIVLAGGTQMLAVSAILKALGEDMKRFMIATTRWVVNDRSATFVETAREIG 269
+ G D+ LAGGTQ+ A+++ G + +ATT +V D SA A +
Sbjct: 181 AAGALDAGIDVTLAGGTQLATAGALVRHDGV-TEPMTLATTSFVAGDDSAGIDALAADQD 239
Query: 270 IITYSADLDF-SNSKFKGLRDYERGYVKEGVGAGGATWLAVKSGFSPEDVSEKVEELYER 328
+ D F + + Y G KEGVG GGA LA ++G + V + +Y+R
Sbjct: 240 LAVTVTDPAFEARESHPAMAAYLDGEAKEGVGMGGALALAAEAGIGMDSVRNAIISVYDR 299
Query: 329 L 329
+
Sbjct: 300 V 300
>pir||S74983 hypothetical protein sll1500 - Synechocystis sp. (strain PCC 6803)
>gi|1652098|dbj|BAA17023.1| (D90902) hypothetical
protein [Synechocystis sp.]
Length = 369
Score = 146 bits (365), Expect = 3e-34
Identities = 115/342 (33%), Positives = 171/342 (49%), Gaps = 24/342 (7%)
Query: 4 LFLLVLGNTEISTIPGISVAGATPELTKITPVADAEYLFHEKPLTIDA-IPVTP-EGHPT 61
+F+ VLG TE IPGIS AG TP K+T +ADAE+L K T A P+ P +
Sbjct: 24 VFVCVLGFTETGLIPGISAAGKTPADRKLTAIADAEFLI--KGTTAGATYPLPPLISGVS 81
Query: 62 PAIITKAAKELADFPIIVIRGGTYLAPLVPHVHISDVVGRDFRKEIALP--EFGEIIKRA 119
P ITKA + P+ + G + P VP +++ R ALP + ++
Sbjct: 82 PVFITKALVDALHTPVYLFNSGLPIPPAVPVINLDGQPARCLSTGQALPLALVEHLFQQG 141
Query: 120 KLFGEELNKLPIKE-LVIGESTPGGTTTAQAVLWALGYEA--RTSSASPNNPQELKERVI 176
+G +L + + LV+ E GGTTTA VL LG +A + +S+ P+ + K ++
Sbjct: 142 LQWGAQLAQEHAESYLVLSECVVGGTTTALGVLLGLGIDAGGKVNSSHPHCNHQQKLALV 201
Query: 177 MEGFNRAGIEKGQLSEKPLEALRQFGDPMIATVVGLSL--GFRKDIVLAGGTQMLAVSAI 234
R +E +E + GDPM V G+++ ++LAGGTQMLAV A+
Sbjct: 202 -----RQSLEHHSPHLNAMEVVAAVGDPMQMVVAGMAIAASHSTGVMLAGGTQMLAVYAL 256
Query: 235 LKA------LGEDMKRFMIATTRWVVNDRSATFVETAREIGIITYSA-DLDFSNSKFKGL 287
++A L D R ++ TT+WV D S V A + ++ A L FS+S + L
Sbjct: 257 IQALTRQQNLAVDFSRLVVGTTKWVCEDASGDTVGLANLLAPVSLLAPQLSFSSSVYPQL 316
Query: 288 RDYERGYVKEGVGAGGATWLA-VKSGFSPEDVSEKVEELYER 328
+ YE+G+VKEGVGAG A + + E + E +E L R
Sbjct: 317 QVYEQGFVKEGVGAGAMAIAAHLYKNWGQEQLLELIENLITR 358
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.136 0.385
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127019574
Number of Sequences: 2977
Number of extensions: 5481216
Number of successful extensions: 13751
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13710
Number of HSP's gapped (non-prelim): 10
length of query: 336
length of database: 189,106,746
effective HSP length: 58
effective length of query: 278
effective length of database: 154,394,500
effective search space: 42921671000
effective search space used: 42921671000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 165 (68.7 bits)