BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2334 (malF-like) DE:probable SUGAR ABC TRANSPORTER, PERMEASE
PROTEIN
(284 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75187 probable sugar abc transporter, permease protein PAB... 553 e-157
pir||E71220 probable sugar transport membrane protein - Pyrococc... 524 e-148
pir||D72543 probable sugar transport system permease protein APE... 324 9e-88
pir||C72279 sugar ABC transporter, permease protein - Thermotoga... 304 9e-82
pir||T46751 inner membrane protein malF [validated] - Thermococc... 132 6e-30
pir||G75395 ABC transporter, permease protein, MalFG family - De... 131 1e-29
gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti] 128 7e-29
pir||T45202 probable transport protein malf [imported] - Mycobac... 128 9e-29
pir||C70952 probable sugA protein - Mycobacterium tuberculosis (... 124 1e-27
gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane p... 121 1e-26
dbj|BAB06444.1| (AP001516) lactose transport system (permease) [... 120 1e-26
dbj|BAB04964.1| (AP001511) unknown conserved protein in others [... 120 2e-26
dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4] 117 2e-25
pir||D72331 sugar ABC transporter, permease protein - Thermotoga... 117 2e-25
pir||T36901 probable integral membrane transport protein - Strep... 115 7e-25
emb|CAB72405.1| (AL138978) putative integral membrane transport ... 113 2e-24
sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN L... 111 7e-24
pir||T36087 probable binding protein dependent transport protein... 111 1e-23
pir||T36913 probable integral membrane sugar transport protein -... 109 3e-23
dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Ba... 108 8e-23
pir||S77536 lactose transport system permease protein lacF - Syn... 108 1e-22
pir||T47064 hypothetical protein [imported] - Yersinia pestis >g... 107 1e-22
emb|CAB61917.1| (AL133278) putative transport system permease pr... 107 1e-22
emb|CAB55533.1| (AL117322) putative binding-protein-dependent tr... 107 2e-22
dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter ... 106 2e-22
sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 106 2e-22
pir||F72292 glycerol-3-phosphate ABC transporter, permease prote... 104 1e-21
pir||C71123 probable sugar transport system permease protein - P... 103 3e-21
emb|CAB95276.1| (AL359779) putative sugar transport integral mem... 102 5e-21
gb|AAK41271.1| Maltose transport inner membrane protein [Sulfolo... 102 6e-21
gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida] 102 6e-21
pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307... 101 8e-21
pir||T35790 probable transmembrane sugar transport protein - Str... 101 1e-20
pir||G75206 maltodextrin transport system permease protein PAB01... 101 1e-20
dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Ba... 101 1e-20
pir||B69588 L-arabinose transport (integral membrane protein) ar... 100 2e-20
emb|CAB86098.1| (AL163003) putative sugar transporter inner memb... 100 2e-20
sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 100 3e-20
emb|CAA61935.1| (X89810) putative integral membrane protein [Bac... 99 4e-20
pir||D72395 sugar ABC transporter, permease protein - Thermotoga... 99 6e-20
dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane ... 99 6e-20
pir||D82557 ABC transporter sugar permease XF2447 [imported] - X... 98 9e-20
emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaero... 98 2e-19
emb|CAB59596.1| (AL132662) probable sugar transporter inner memb... 98 2e-19
dbj|BAB04837.1| (AP001511) lactose transport system (permease) [... 97 3e-19
pir||G70943 hypothetical protein Rv2040c - Mycobacterium tubercu... 96 4e-19
pir||T37130 probable transport system integral membrane protein ... 96 5e-19
pir||T03552 maltose transport inner membrane protein - Rhodobact... 96 6e-19
pir||B71369 probable sugar ABC transporter, permease protein (y4... 96 6e-19
emb|CAB61807.1| (AL133236) putative integral membrane transport ... 96 6e-19
gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae] 95 8e-19
sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 95 8e-19
sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 94 1e-18
emb|CAB88145.1| (AL352956) putative binding protein dependent tr... 93 3e-18
emb|CAB95283.1| (AL359779) putative sugar transport integral mem... 93 3e-18
pir||G72203 sugar ABC transporter, permease protein - Thermotoga... 92 5e-18
pir||T46603 permease cebF [imported] - Streptomyces reticuli >gi... 92 5e-18
gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Th... 92 5e-18
sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 92 7e-18
dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Ba... 92 9e-18
pir||G72379 sugar ABC transporter, permease protein - Thermotoga... 91 2e-17
emb|CAB70940.1| (AL137778) putative transport system inner membr... 91 2e-17
emb|CAC11292.1| (AL445063) trehalose/maltose transporter, inner ... 90 3e-17
emb|CAB59589.1| (AL132662) putative sugar transporter inner memb... 90 3e-17
emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyc... 90 3e-17
pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC... 89 8e-17
gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner memb... 89 8e-17
pir||F70693 probable ugpA protein - Mycobacterium tuberculosis (... 88 1e-16
emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycob... 88 1e-16
emb|CAC01655.1| (AL391072) putative sugar-transporter integral m... 88 1e-16
pir||C81147 sulfate ABC transporter, permease protein NMB0880 [i... 87 2e-16
pir||E72357 sugar ABC transporter, permease protein - Thermotoga... 87 2e-16
pir||G81875 sulfate ABC transporter, inner membrane protein NMA1... 87 2e-16
emb|CAC10105.1| (AL442165) putative cellobiose transport permeas... 87 3e-16
emb|CAA68973.1| (Y07706) putative maltose permease [Streptomyces... 85 9e-16
pir||G83248 probable permease of ABC sugar transporter PA3189 [i... 85 9e-16
emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/m... 85 1e-15
emb|CAB55715.1| (AL117387) putative binding protein dependent tr... 84 2e-15
dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [B... 84 2e-15
emb|CAC16436.1| (AL450165) putative sugar transport permease [St... 84 2e-15
sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 84 2e-15
dbj|BAA14894.1| (D90770) Sn-glycerol-3-phosphate transport syste... 84 2e-15
pir||H82184 glycerol-3-phosphate ABC transporter, permease prote... 84 2e-15
sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ... 83 3e-15
dbj|BAB05584.1| (AP001513) sugar transport system (permease) (bi... 83 4e-15
emb|CAB56684.1| (AL121596) binding-protein dependent transport p... 83 5e-15
pir||E70703 probable uspA protein - Mycobacterium tuberculosis (... 82 1e-14
gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus... 80 3e-14
sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 80 3e-14
gb|AAC98811.1| (U75905) putative ABC-type sugar transporter [Pse... 80 3e-14
pir||T37228 probable sugar transport system permease protein - S... 80 4e-14
dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system... 80 4e-14
emb|CAB71197.1| (AL138538) putative sugar transport system perme... 79 5e-14
dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system... 79 5e-14
pir||G82694 ABC transporter sulfate permease XF1346 [imported] -... 79 7e-14
dbj|BAB04621.1| (AP001510) L-arabinose transport system (permeas... 79 7e-14
sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 78 9e-14
pir||A72756 probable multiple sugar-binding transport system per... 78 1e-13
emb|CAB72191.1| (AL138851) putative sugar transporter inner memb... 78 2e-13
sp|P10905|UGPA_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PE... 77 2e-13
sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PER... 77 2e-13
sp|P23860|POTB_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERM... 77 3e-13
dbj|BAA36746.1| (AB016764) potB [Escherichia coli] 77 3e-13
emb|CAB61863.1| (AL133252) putative ABC-transporter transport pr... 77 3e-13
emb|CAB94618.1| (AL359214) putative sugar transporter integral m... 77 3e-13
sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROT... 76 3e-13
gi|10955068 agtC [Agrobacterium tumefaciens] >gi|6689866|gb|AAF2... 76 3e-13
dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bac... 76 3e-13
gb|AAC12801.1| (U67851) ChtJ [Agrobacterium sp.] >gi|3153870|gb|... 76 5e-13
sp|P39128|LPLB_BACSU LPLB PROTEIN >gi|7475932|pir||A69653 transm... 76 6e-13
dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus ... 76 6e-13
gb|AAA22575.1| (L19163) transmembrane protein [Bacillus subtilis] 75 8e-13
gb|AAB67295.1| (U59485) AttA2 [Agrobacterium tumefaciens] 75 8e-13
pir||H70033 maltodextrin transport system permease homolog yvdH ... 75 1e-12
pir||A72283 maltose ABC transporter, permease protein - Thermoto... 75 1e-12
pir||B82310 sulfate ABC transporter, permease protein VC0540 [im... 75 1e-12
gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira hyod... 74 2e-12
emb|CAB91123.1| (AL355913) putative transport system integral me... 74 2e-12
pir||T46951 probable membrane component of 2-aminoethylphosphona... 73 3e-12
sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 73 4e-12
sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANS... 73 4e-12
pir||H75503 maltose ABC transporter, permease protein - Deinococ... 73 4e-12
emb|CAC11828.1| (AL445065) probable sugar ABC transporter, perme... 73 4e-12
pir||T35671 probable transmembrane transport protein - Streptomy... 73 5e-12
gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus s... 72 7e-12
emb|CAB88162.1| (AL352956) possible binding-protein-dependent tr... 72 7e-12
pir||E82201 spermidine/putrescine ABC transporter, permease prot... 72 7e-12
emb|CAB08006.1| (Z94043) hypothetical protein [Bacillus subtilis] 72 9e-12
pir||D70038 maltodextrin transport system permease homolog yvfL ... 72 9e-12
pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii ... 71 1e-11
pir||T30266 suger transport protein protein - Streptomyces livid... 71 1e-11
pir||C75208 sugar transport system permease protein PAB2230 - Py... 71 1e-11
gb|AAC27496.1| (AF077856) PotB [Actinobacillus actinomycetemcomi... 71 2e-11
gb|AAC99626.1| (AF043654) BxlF [Streptomyces lividans] 71 2e-11
gi|7524888 sulfate transport system permease protein [Chlorella ... 70 3e-11
pir||A72786 probable transport system permease protein APE0270 -... 70 3e-11
gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|... 69 5e-11
emb|CAB51940.1| (AJ132472) Putative ABC-type Sugar Transporter [... 69 6e-11
pir||A83610 sulfate transport protein CysW PA0281 [imported] - P... 69 6e-11
>pir||F75187 probable sugar abc transporter, permease protein PAB2334 -
Pyrococcus abyssi (strain Orsay)
>gi|5457458|emb|CAB48949.1| (AJ248283) probable SUGAR
ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus abyssi]
Length = 284
Score = 553 bits (1410), Expect = e-157
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEAL 60
MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEAL
Sbjct: 1 MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEAL 60
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD 120
KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD
Sbjct: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD 120
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY
Sbjct: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG 240
LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG
Sbjct: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG 240
Query: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT
Sbjct: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
>pir||E71220 probable sugar transport membrane protein - Pyrococcus horikoshii
>gi|3256409|dbj|BAA29092.1| (AP000001) 284aa long
hypothetical sugar transport membrane protein
[Pyrococcus horikoshii]
Length = 284
Score = 524 bits (1334), Expect = e-148
Identities = 262/284 (92%), Positives = 274/284 (96%)
Query: 1 MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEAL 60
M KSKYIPYLLL PAV YLLFFIGYPL+QALYLAFTKNGAFSLDTVRRA SDPTFWEAL
Sbjct: 1 MKFKSKYIPYLLLIPAVAYLLFFIGYPLVQALYLAFTKNGAFSLDTVRRATSDPTFWEAL 60
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD 120
KYTILLA+VIVP+QL+LAL+LALAVNR FKG+DL IYALVIPLTISDVAAGLIWYTML+D
Sbjct: 61 KYTILLAIVIVPIQLVLALILALAVNRTFKGRDLAIYALVIPLTISDVAAGLIWYTMLAD 120
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
YGFINKL LNLG++S+PIHFFGYEYR MEFLAIVIAEVWRATAIVFVIILAGLQMISREY
Sbjct: 121 YGFINKLFLNLGLLSNPIHFFGYEYRTMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG 240
LEAAEVFGAGYWTRLR+IVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG
Sbjct: 181 LEAAEVFGAGYWTRLRKIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG 240
Query: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
FYQLTEIKDYGVASIYALTIALLS+ LGALYVKFLKAEYLEVRT
Sbjct: 241 FYQLTEIKDYGVASIYALTIALLSLALGALYVKFLKAEYLEVRT 284
>pir||D72543 probable sugar transport system permease protein APE1632 -
Aeropyrum pernix (strain K1) >gi|5105320|dbj|BAA80633.1|
(AP000062) 288aa long hypothetical sugar transport
system permease protein [Aeropyrum pernix]
Length = 288
Score = 324 bits (821), Expect = 9e-88
Identities = 152/273 (55%), Positives = 208/273 (75%), Gaps = 2/273 (0%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPT--FWEALKYTILLA 67
+LLL+P ++YL FI YP+I + +AF KNG+ S + V + P FW ALKYT LLA
Sbjct: 15 WLLLSPTILYLAVFIAYPIIDSFRIAFVKNGSISFEAVDFLLYSPLSEFWSALKYTFLLA 74
Query: 68 LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKL 127
++++P + +LAL + + + F+G+D IY LV+PL +SD+AAGLIWY+ML+ GF+NKL
Sbjct: 75 ILVIPTETLLALTAVILLFKRFRGRDAVIYVLVMPLALSDLAAGLIWYSMLTGKGFLNKL 134
Query: 128 LLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVF 187
LLN+G+IS PI FFGYE R + FLA+ +AEVWR+TAIVFVI+ AG Q+I++E EAAEVF
Sbjct: 135 LLNMGLISDPIIFFGYENRWLTFLAVYLAEVWRSTAIVFVILFAGAQLINKEVFEAAEVF 194
Query: 188 GAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLTEI 247
GA ++ +LR I+IPM+KPS+Q+AL+IRTLFA QVF VVWILAGRDIPVLAGE +Y + E+
Sbjct: 195 GASFYVKLRHILIPMIKPSLQAALLIRTLFAFQVFAVVWILAGRDIPVLAGEAYYSIVEL 254
Query: 248 KDYGVASIYALTIALLSIFLGALYVKFLKAEYL 280
Y VA++YA+ IALLS +G +Y++ + L
Sbjct: 255 HKYDVAALYAIVIALLSASIGVVYIRVFRETLL 287
>pir||C72279 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981788|gb|AAD36309.1|AE001779_11
(AE001779) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 281
Score = 304 bits (770), Expect = 9e-82
Identities = 149/279 (53%), Positives = 204/279 (72%), Gaps = 1/279 (0%)
Query: 3 IKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKY 62
++ K+I +LL+ PAV+YL+ +GYPL + LAFT + F L +R + + FW A+K
Sbjct: 1 MRGKWISFLLILPAVLYLVLLMGYPLFETFRLAFTSDEGF-LGNFKRLVENGGFWGAMKN 59
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
TILL VIVP+QLI AL LAL VN+ FKG +Y + IPL +SDV A L+ YT+ S G
Sbjct: 60 TILLTAVIVPLQLIFALGLALFVNQKFKGYTTVLYFIAIPLALSDVTAALMSYTIFSPNG 119
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
++NK+L+NL +I PI+FFGY ++ EF IV+ EVWRAT +VF+I+LAGLQ I++EYLE
Sbjct: 120 YLNKILMNLHLIERPIYFFGYMFKAREFWVIVLTEVWRATPLVFIILLAGLQSINKEYLE 179
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFY 242
AA++FG W + +I++P+LKPSI SAL++RTLFA Q+FGVVW+LAGRDIPVLAGE +Y
Sbjct: 180 AADLFGFSRWKKFTKIILPLLKPSIMSALLLRTLFAFQIFGVVWLLAGRDIPVLAGETYY 239
Query: 243 QLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLE 281
T + D +AS YAL IAL++I + Y+ FL A++LE
Sbjct: 240 WYTFMNDPKMASAYALVIALVTIVVSWFYITFLSAKHLE 278
>pir||T46751 inner membrane protein malF [validated] - Thermococcus litoralis
>gi|2828821|gb|AAC38137.1| (AF012836) inner membrane
protein MalF [Thermococcus litoralis]
Length = 300
Score = 132 bits (328), Expect = 6e-30
Identities = 83/279 (29%), Positives = 148/279 (52%), Gaps = 23/279 (8%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-------SLDTVRRAISDPTFWEALKY 62
YL++ P + +L FI P++ +++ ++ F L R +S FW +
Sbjct: 23 YLMILPLLTVVLVFIILPVMGTFWISLHRDVTFIPEKPFVGLRNYLRVLSAREFWYSTFV 82
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DY 121
T+ + V V ++ IL L AL +N KG+ + ++IP + + + W M + Y
Sbjct: 83 TVSFSFVSVSLETILGLSFALILNERLKGRGVLRAIVLIPWAVPTIISARTWELMYNYSY 142
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYL 181
G N +L LG+ SP+++ G + F AIVIA+VW+ T ++ +++LAGLQ I ++
Sbjct: 143 GLFNWILSILGV--SPVNWLGTP--ISAFFAIVIADVWKTTPLMTLLLLAGLQAIPQDLY 198
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG-------RDIP 234
EAA + GA + R + I +P+LKP + ALI+RT+ A++VF ++++L G I
Sbjct: 199 EAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVLTGGGPGGATTSIS 258
Query: 235 VLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
+LA + + DYG+ S ++ +L + +Y+K
Sbjct: 259 LLA----FNYYNLGDYGIGSAISILTFVLVLSFTIVYLK 293
>pir||G75395 ABC transporter, permease protein, MalFG family - Deinococcus
radiodurans (strain R1)
>gi|6459198|gb|AAF11009.1|AE001988_5 (AE001988) ABC
transporter, permease protein, MalFG family [Deinococcus
radiodurans]
Length = 327
Score = 131 bits (325), Expect = 1e-29
Identities = 85/290 (29%), Positives = 151/290 (51%), Gaps = 24/290 (8%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFT---------------KNGAFSLD--TVRRAISD 53
L+L P ++ L GYPL++ +YL+FT +N F+ + +
Sbjct: 40 LMLIPMLLVLAAVAGYPLLRTIYLSFTDYNFLNDPAPKWIGLQNYWFTTEEGVGLGLLQT 99
Query: 54 PTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLI 113
P +W+++ T+ L+ V ++ +L L AL +N FKGK L A+++P I V + +
Sbjct: 100 PEWWQSVWNTVKFTLLSVSLETLLGLAFALVINSNFKGKGLMRTAILVPWAIPTVVSAQM 159
Query: 114 WYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAG 172
W M +D +G I++ +LG + + F + A+V +VW+ T + +++LAG
Sbjct: 160 WNWMYNDSFGIISQWGQSLGFLKTGESFLSNPDTALG--ALVAVDVWKTTPFMALLLLAG 217
Query: 173 LQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRD 232
LQ I + EAA+V GA WT+ R+ +P+L P++ ALI RTL +++VF + +I+ G +
Sbjct: 218 LQTIPGDMYEAADVDGASAWTKFWRLTLPLLTPALLVALIFRTLDSLRVFDMPYIVKG-N 276
Query: 233 IPVLAGEGFYQLTEI---KDYGVASIYALTIALLSIFLGALYVKFLKAEY 279
P Y E+ +G S ++ I L+ + A+YV L+ ++
Sbjct: 277 APETMTMSIYARQELIANSQFGFGSAVSVLIFLIIMVFTAIYVTSLRVKF 326
>gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti]
Length = 328
Score = 128 bits (319), Expect = 7e-29
Identities = 81/293 (27%), Positives = 149/293 (50%), Gaps = 35/293 (11%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTV---------------------R 48
+L L P + L G+PLI+ +Y +FT +L R
Sbjct: 32 WLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSGAEFVGFANYLSWITLKSGRTIYR 91
Query: 49 RAISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDV 108
++DP +W A+ T+ ++ V ++ L L++AL +N F G+ L A++IP I +
Sbjct: 92 GLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALVLNAQFPGRGLVRAAILIPWAIPTI 151
Query: 109 AAGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFV 167
+ +W ML+D +G +N +L+ LG+I I + M +A +I +VW+ T + +
Sbjct: 152 VSAKMWAWMLNDQFGILNDMLIGLGLIGEKIAWTASPDTAM--IAELIVDVWKTTPFMAL 209
Query: 168 IILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
+ILAGLQM+ + EAA++ G R+ +P+++P++ A+I R L A+++F ++++
Sbjct: 210 LILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRMLDALRIFDLIYV 269
Query: 228 LA-----GRDIPVLAGEGFYQLTEIKDYGVAS-----IYALTIALLSIFLGAL 270
L + + V+A E + + YG A+ + TI +L ++LG L
Sbjct: 270 LTPNNAQTKTMSVMARENLFDFDKFA-YGAAASTMLFLIIATITILYMWLGRL 321
>pir||T45202 probable transport protein malf [imported] - Mycobacterium leprae
>gi|699149|gb|AAA62915.1| (U15180) maltose transport
inner membrane protein [Mycobacterium leprae]
Length = 310
Score = 128 bits (318), Expect = 9e-29
Identities = 70/230 (30%), Positives = 125/230 (53%), Gaps = 17/230 (7%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA--------FSLDTVRRAISDPTFWEA 59
+ +LL+TPA + +L YP+ A++L+ + L + ++DP +W A
Sbjct: 28 LAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWTA 87
Query: 60 LKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWY-TML 118
L T+ + +V V ++ IL L+LAL ++R GK L A++IP +I V A WY
Sbjct: 88 LAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWT 147
Query: 119 SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
G++ LL P ++ ++I EVW+ T + +++L GL ++
Sbjct: 148 PGTGYLASLL--------PQGSVPLTEQIPSLSIVIIVEVWKTTPFMSLLLLVGLALVPE 199
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
+ L+AA++ GAG W RL +I++P++KP++ AL+ RTL A ++F +++L
Sbjct: 200 DLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNIYVL 249
>pir||C70952 probable sugA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695822|emb|CAA15892.1| (AL021006) sugA
[Mycobacterium tuberculosis]
Length = 307
Score = 124 bits (309), Expect = 1e-27
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 17/232 (7%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA--------FSLDTVRRAISDPTFWEA 59
+ ++L+ PA + ++ YP+ AL+L+ +N L + D +W A
Sbjct: 25 LAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYWWTA 84
Query: 60 LKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWY-TML 118
L T+ + V V ++ +L L LAL ++R GK L A++IP I V A WY
Sbjct: 85 LAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWT 144
Query: 119 SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
G++ LL P ++ +VIAEVW+ T + +++LAGL ++
Sbjct: 145 PGTGYLANLL--------PYDSAPLTQQIPSLGIVVIAEVWKTTPFMSLLLLAGLALVPE 196
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
+ L AA+V GA W RL ++++PM+KP+I AL+ RTL A ++F +++L G
Sbjct: 197 DLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNIYVLTG 248
>gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane protein [Thermus brockianus]
Length = 280
Score = 121 bits (300), Expect = 1e-26
Identities = 89/279 (31%), Positives = 139/279 (48%), Gaps = 22/279 (7%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTV-----RRAISDPTFWEALKYT 63
P+L LTP + F +P+ +LYL+F + R + DP FW ALK T
Sbjct: 5 PFLFLTPYALLFAVFWAWPIAYSLYLSFLNTRVYPWRLEVGVNWGRLLQDPFFWTALKNT 64
Query: 64 ILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVAAGLIWYTMLS-DY 121
+ + LV VP+ L LAL LALA+N A + K +A P+ + VA ++ + + ++
Sbjct: 65 LFILLVQVPLMLALAL-LALALNSALLRAKGFFRFAFFAPVVVGAVAYSAVFRLLFNTEF 123
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMME---FLAIVIAEVWRATAIVFVIILAGLQMISR 178
G +N LL LG GY++ I+IA WR T +I+LAGLQ I +
Sbjct: 124 GAVNALLRTLG-------HPGYDWLYAPGPAMAVIIIALTWRWTGYNAIILLAGLQSIPK 176
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIPV 235
E EAA + GAG W R + +P ++P + ALI+ + +Q+F +++ G + +
Sbjct: 177 ELYEAAALDGAGPWQRFWHVTLPGIRPVLLFALILSIIGTLQLFTEPFLITGGGPGNATM 236
Query: 236 LAGEGFYQL-TEIKDYGVASIYALTIALLSIFLGALYVK 273
G YQ ++G AS A T+ALL+ L ++
Sbjct: 237 TLGVYLYQQGFRSFNFGYASAIAYTVALLAALFSFLQMR 275
>dbj|BAB06444.1| (AP001516) lactose transport system (permease) [Bacillus
halodurans]
Length = 290
Score = 120 bits (299), Expect = 1e-26
Identities = 87/275 (31%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVR-----RAISDPTFWEALKYTI 64
+L ++ AV + F YP++QAL L+F +L+ V R +DPTF ALK T+
Sbjct: 12 WLFISLAVAAITIFYFYPMLQALLLSFQSGMGANLEYVGLANYIRLFNDPTFLTALKNTL 71
Query: 65 LLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
L L+ VP+ ++LAL+ ++ +N A K + A+ +P S VA +I+ + G
Sbjct: 72 LYLLIQVPLMIVLALIFSVLLNDATLKFRSFFRIAIFLPCVTSLVAYSVIFKYLFGMDGL 131
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N+ LLN+ +IS+PI + + + I++A WR T + L+ LQ + + EA
Sbjct: 132 VNQFLLNVSLISAPIQWLSDPFWAK--VTIIVAITWRWTGYNMIFYLSSLQNVDQSIYEA 189
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG-VVWILAG--RDIPVLAGEG 240
A++ GA + + +I IPMLKP I I T+ +Q+F VV I G + + +
Sbjct: 190 AKIDGATPFQQFTKITIPMLKPIILFTSITSTIGTLQIFDEVVNITNGGPGNATLSISQY 249
Query: 241 FYQLT--EIKDYGVASIYALTIALLSIFLGALYVK 273
Y L+ D+G AS + I +L I L + K
Sbjct: 250 IYNLSFEYTPDFGYASTVSYVIVMLVIVLSIVQFK 284
>dbj|BAB04964.1| (AP001511) unknown conserved protein in others [Bacillus
halodurans]
Length = 445
Score = 120 bits (298), Expect = 2e-26
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 7/264 (2%)
Query: 26 YPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVIVPVQLILALVLALAV 85
Y +Q + A ++ + D W A+ T+ +V V +L+L L +AL +
Sbjct: 181 YHYVQNIETAILESNFIGFSHYVNYVQDSRMWAAMSNTLFFTVVSVAAELVLGLAIALLI 240
Query: 86 NRAFKGKDLTIYALVIPLTISDVAAGLIW-YTMLSDYGFINKLLLNLGIISSPIHFFGYE 144
NR FKG+ L A++IP I A ++W Y +G I LG+IS
Sbjct: 241 NRTFKGRGLVRVAVLIPWAIPTAVAAMMWRYLYDGQFGVIAHYFEQLGLISDSSVLLSTG 300
Query: 145 YRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLK 204
M +I+ A+VW+ T + +++LAGLQ I EAA+V GA +I +P+LK
Sbjct: 301 AGAM--FSIIFADVWKTTPYMALLLLAGLQTIPNSLYEAAKVDGANRIQTFFKITLPLLK 358
Query: 205 PSIQSALIIRTLFAMQVFGVVWILAG----RDIPVLAGEGFYQLTEIKDYGVASIYALTI 260
+I AL+ RTL A +VF ++++L G ++ + L +++G S ++ +
Sbjct: 359 SAILVALLFRTLDAFRVFDLIFVLTGGGPANSTESISIYAYRTLFSQQNFGAGSALSVIV 418
Query: 261 ALLSIFLGALYVKFLKAEYLEVRT 284
L + ++KF+ ++ E RT
Sbjct: 419 FLSVALISFAFIKFIGSDLFEGRT 442
>dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4]
Length = 282
Score = 117 bits (290), Expect = 2e-25
Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 21/270 (7%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS--LDTVR---RAISDPTFWEALKYT 63
PYL L P +V+ F +P++ + YL+F + L+ R + DP F ALK T
Sbjct: 6 PYLFLAPYLVFFGLFWAWPIVYSFYLSFVNTRVYPWRLEPALNWGRLLQDPFFAVALKNT 65
Query: 64 ILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVAAGLIWYTMLS-DY 121
+ + V VP+ L LAL+LALA+N A + K +A P+ + VA ++ + + ++
Sbjct: 66 LFILAVQVPLMLALALLLALALNSALLRFKGFYRFAFFAPVVVGAVAYSAVFRLLFNTEF 125
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMME---FLAIVIAEVWRATAIVFVIILAGLQMISR 178
G +N LL LG GY++ I++A WR T +I+LAGLQ I +
Sbjct: 126 GAVNALLRALG-------HPGYDWLYAPGPAMAVIIVALTWRWTGYNAIILLAGLQNIPK 178
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIPV 235
E EAA + GAG W + R + +P ++P + L++ + +Q+F +++ G + +
Sbjct: 179 ELYEAAAIDGAGPWQQFRHVTLPGIRPVLLFCLVLSIIGTLQLFTEPFLITGGGPGNATM 238
Query: 236 LAGEGFYQL-TEIKDYGVASIYALTIALLS 264
G YQ ++G AS A T+ALL+
Sbjct: 239 TLGLYLYQQGFRSFNFGYASTIAYTVALLA 268
>pir||D72331 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981341|gb|AAD35893.1|AE001748_9
(AE001748) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 300
Score = 117 bits (290), Expect = 2e-25
Identities = 73/231 (31%), Positives = 119/231 (50%), Gaps = 9/231 (3%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA------FSLDTVRRAISDPTFW 57
K + + +T + ++ FI YPL+ + ++F + L + DP FW
Sbjct: 12 KQLLLAFFFITIPTLLMVLFIYYPLVFGIKISFYQYDIVGESLYIGLKNYVDLLRDPLFW 71
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
A K ++L LV+ P+QLI +++LA+ ++RA +G++L + +P+ A + W M
Sbjct: 72 NAFKNSLLYLLVVPPLQLI-SILLAVLLDRAIRGRNLFRTLIFLPVVTPITIAAITWQWM 130
Query: 118 LSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMIS 177
+ GFIN LL +L II PI F + AI+ +W+ VI LAGLQ I
Sbjct: 131 YREKGFINFLLQSLHIIDEPIAFLSDP--KIALFAIMFVTMWKGFGYYMVIYLAGLQSIP 188
Query: 178 REYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
RE +EAA V GA ++ IP+LKP I + ++ A+ VFG ++ +
Sbjct: 189 RELIEAARVDGAKPSQVFFKVTIPLLKPYILFCSTMSSIAALNVFGEIYAM 239
>pir||T36901 probable integral membrane transport protein - Streptomyces
coelicolor >gi|5419996|emb|CAB46388.1| (AL096743)
putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 115 bits (285), Expect = 7e-25
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 21/285 (7%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFT--------KNGAFSLDT-VRRAISDPTFWE 58
+PYLL+ PA + +L FI YP+I Y + +NG D V+ DP FW+
Sbjct: 26 LPYLLIGPAALLMLGFIAYPVISVFYYSLQEYNPTKPWRNGFAGFDNFVKIFTEDPVFWD 85
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML 118
L ++ V V +QL+ L LAL VN+ F G+ + + P +S V IW +
Sbjct: 86 TLVFSAKWVFVEVGLQLLFGLALALIVNQTFVGRGVGRAMVFSPWAVSGVLTSAIWVLLY 145
Query: 119 SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
+ + + L ++GI S + + F A V+A++WR ++ILA LQ +S+
Sbjct: 146 NSQTGVTRYLADMGIGSYGTSWLSDTSTV--FSAAVVADLWRGVPFFAILILADLQSVSK 203
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG-------R 231
+ EAAEV GA + I +P LK +I + ++R ++ +++ L G
Sbjct: 204 DLYEAAEVDGASRLKQFWHITLPHLKDAIILSTLLRAVWEFNNVDLLYTLTGGGPAGETT 263
Query: 232 DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLK 276
+P+ + D+G AS ++ +F +Y++ K
Sbjct: 264 TLPLYIAN---TSVDAHDFGYASALTTVAFVILLFCSIVYLRLSK 305
>emb|CAB72405.1| (AL138978) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 113 bits (281), Expect = 2e-24
Identities = 86/288 (29%), Positives = 136/288 (46%), Gaps = 32/288 (11%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFT--------KNGAFSLDTVRRAISDPTF----WE 58
L ++PAVV LL F+ P++ + +AFT + D RA D F W
Sbjct: 37 LPVSPAVVLLLLFLAGPIVYCVVIAFTDLQLTGQAQESFVGFDNFTRAFKDEAFLNAVWL 96
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKG-KDLTIYALVIPLTISDVAAGLIWYTM 117
L +T+L +L+ Q L L LA + RA K + LT +V + +V AG + Y
Sbjct: 97 TLVFTVLSSLI---GQNTLGLALASLMQRASKPVRTLTGGIVVTAWVLPEVVAGFLLYAF 153
Query: 118 LSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMIS 177
G +N +L L + S F + LA+ A VWR TA ++ A L I
Sbjct: 154 FRREGTLNAILDWLHLPSQNWLF------TLPILAVSFANVWRGTAFSMLVYSAALNEIP 207
Query: 178 REYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA-------G 230
+E EAAE GA W R+ I +PM++ SI + L++ TL + VFG++W++
Sbjct: 208 KEVTEAAEADGASGWRRMWHITLPMIRRSIGTNLMLNTLQTLSVFGLIWVMTRGGPSGNS 267
Query: 231 RDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
+ +P+ E +Q + I G + AL + L+ +Y++ L+ E
Sbjct: 268 QTLPLFMYEQAFQNSLI---GYGTAVALLLLLIGSLFSVVYLRLLRTE 312
>sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN LACF
>gi|72502|pir||MMAGCF membrane protein lacF -
Agrobacterium radiobacter >gi|38969|emb|CAA47162.1|
(X66596) lacF [Agrobacterium radiobacter]
Length = 298
Score = 111 bits (276), Expect = 7e-24
Identities = 72/223 (32%), Positives = 116/223 (51%), Gaps = 8/223 (3%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLA-FTKNGAF----SLDTVRRAISDPTFWEALKYTI 64
+L + PA+ + F+ YP++++L L+ +T G + R +DP FW+AL+ T+
Sbjct: 18 WLFVAPAIALISVFMLYPILRSLVLSLYTGRGMMLKFSGTGNLVRLWNDPVFWQALQNTV 77
Query: 65 LLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+ +V VP+ + +AL+LA +N + L + +P S VA +++ +M S G
Sbjct: 78 IFFVVQVPIMITMALILAAMLNNPKLRYSGLFRTMIFLPCVSSLVAYSILFKSMFSLDGV 137
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N LL +GII PI + + + I+IA WR T + LA LQ I R EA
Sbjct: 138 VNNTLLAIGIIGEPIGWLTDPFWAK--VLIIIAITWRWTGYNMIFYLAALQNIDRSIYEA 195
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVW 226
A++ G W R + IPMLKP I I T+ +Q+F V+
Sbjct: 196 AKIDGVPSWGRFAFLTIPMLKPVILFTTITSTIGTLQLFDEVY 238
>pir||T36087 probable binding protein dependent transport protein - Streptomyces
coelicolor >gi|4678630|emb|CAB41203.1| (AL049661)
putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 327
Score = 111 bits (275), Expect = 1e-23
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 19/273 (6%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWEAL 60
+ LLL P++V+L+++IG P++ LAFT + LD + SDPT+ ++
Sbjct: 44 VALLLLAPSLVHLVWWIGLPVVATFALAFTDYDILAGTVTFNGLDNFQEIFSDPTWNASI 103
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD 120
+T++ VPV +++A+VLAL +N +G A+ +P + VA L+W M
Sbjct: 104 WHTVVFTFFTVPVAMVIAVVLALLLNVKMRGAAWYRTAVFLPHVTATVAIALVWMWMFEP 163
Query: 121 -YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
G +N +L +GI P+ ++ + A+++ +W+ I +I LA LQ + +
Sbjct: 164 RLGVVNTMLGWIGI-DGPVWLADPDWALT---AVIVVSIWKGIGIKMLIYLAALQAMPND 219
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA-----GRDIP 234
EAA + GA + I +P+LKP+ L++ + + Q F +++L G
Sbjct: 220 VYEAARIDGASQVRQFFSITLPLLKPATFFVLVVSIIDSFQAFDQLYVLTPDGGPGNSTT 279
Query: 235 VLAGEGFYQLTEIKDYGVASIYALTIALLSIFL 267
V+ E + T K++ + + A ++ L + L
Sbjct: 280 VMTYEIY--RTAFKEFNMGAACAQSVVLFAFLL 310
>pir||T36913 probable integral membrane sugar transport protein - Streptomyces
coelicolor >gi|5420008|emb|CAB46400.1| (AL096743)
putative integral membrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 314
Score = 109 bits (271), Expect = 3e-23
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 36/290 (12%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDT--------VRRAISDPTFWEALKYTI 64
L PA+++++ P + L ++F A D +SDP +++ TI
Sbjct: 35 LLPALIFMIVVTQLPFVATLVISFFDWNALYPDARSFTGFANYGDVLSDPALRKSVWTTI 94
Query: 65 LLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML--SDYG 122
LL + +V V L+L L LAL ++R FKG+ + L+ P + VAA L+W +L +YG
Sbjct: 95 LLTVAVVLVSLVLGLALALLLDRRFKGRGVVRTLLIAPFLVVPVAAALLWKHVLYNPEYG 154
Query: 123 FINKLLLNLG------IISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMI 176
+N LL +G I ++P+ LA+ + VW+ T + +I+LAGLQ
Sbjct: 155 LLNGLLHYVGGPQPDWISNTPL------------LAVEASLVWQWTPFMMLILLAGLQSR 202
Query: 177 SREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI-----LAGR 231
++ +EAA V GAG W + +P L+ ++ ++ +++ +Q F V+ L
Sbjct: 203 DQQQIEAARVDGAGDWQIFVHLTLPHLRRYLELGALLGSIYIVQNFDAVFTITSGGLGTA 262
Query: 232 DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLE 281
++P + FYQ E G+AS + + + SI + ++ + + + E
Sbjct: 263 NLPYTVYQSFYQAHE---NGLASAAGVLVVIGSIIIATFALRVVSSLFRE 309
>dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Bacillus halodurans]
Length = 304
Score = 108 bits (267), Expect = 8e-23
Identities = 77/287 (26%), Positives = 141/287 (48%), Gaps = 32/287 (11%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS--LDTV-----RRAISDPTFWEALKYTILLA 67
PAV+ ++ FI YP + + ++FT FS D V R +DPT W +K T+L
Sbjct: 29 PAVLAVVTFIVYPFLNGIRISFTNWNGFSQSFDWVGFAQYERMFTDPTTWLVVKNTLLYG 88
Query: 68 LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKL 127
+ +Q ++ L AL +N++ + + +T + +P+ IS + G IWY + G
Sbjct: 89 IGSTLLQNLIGLGYALLLNQSIRMRTITRTIIYLPVIISPLVMGYIWYFFFAYQG----- 143
Query: 128 LLNLGIISSPIHFFGYEYRMMEFLA--------IVIAEVWRATAIVFVIILAGLQMISRE 179
G ++ + FFG++ + L IV ++ I +I LAGLQ IS++
Sbjct: 144 ----GAMNDALTFFGFQ--PLNILGNPAVNPWLIVFVNTYQFVGIAMIIYLAGLQSISKD 197
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGE 239
Y EAA++ GA + + + I +P+L PSI +++ + +++F V+ L G P A +
Sbjct: 198 YYEAAQLDGASSFQQFKNITLPLLMPSITINVVLNIIGGLKLFDVIIALTGGG-PGNASQ 256
Query: 240 G-----FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLE 281
++ +D G A+ + +A + + L L + + K + +E
Sbjct: 257 SMSTFMYHLYFSRQDAGYAATQGVFMAFIILVLSILALVYFKRKEVE 303
>pir||S77536 lactose transport system permease protein lacF - Synechocystis sp.
(strain PCC 6803) >gi|1652461|dbj|BAA17383.1| (D90905)
lactose transport system permease protein LacF
[Synechocystis sp.]
Length = 298
Score = 108 bits (266), Expect = 1e-22
Identities = 71/237 (29%), Positives = 118/237 (48%), Gaps = 29/237 (12%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVR-----------RAISDPTFW 57
PYL L PA+V L + YP +QA L+FT+ + LD + R D FW
Sbjct: 16 PYLFLLPALVMLGATVFYPALQAFSLSFTQ---YELDLTKAPAWVGLANFERLWRDRVFW 72
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
++T+L + +VP+ ++L L LA+ VN+ +G A P+ S V AG+ W +
Sbjct: 73 LTFRHTLLYLVGVVPLLIMLPLGLAILVNQKLRGITWFRMAYYTPVITSIVVAGIAWKAL 132
Query: 118 LSDYGFINKLLLNLGI------ISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILA 171
+ G +N++L LG ++SP + ++++ VW+ VI LA
Sbjct: 133 YASNGILNQILALLGFSDGIPWLTSP---------NLALWSVMVVTVWKGLGYYMVIYLA 183
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
GLQ I +E EA + GA W + I IP+++P ++ ++ A++VF V+I+
Sbjct: 184 GLQAIPQELYEAGAIDGADGWRQHWDITIPLMRPYCFLVGVLSSISALKVFEEVYIM 240
>pir||T47064 hypothetical protein [imported] - Yersinia pestis
>gi|4106652|emb|CAA21407.1| (AL031866) ORF82, len=286
aa, probable ABC transporter protein, similar to many,
eg: AE000089_2 Rhizobium sp., (309aa), 37.6% identity in
266 aa overlap, Fasta scores: opt:674, E(): 0, or
Thermococcus litoralis, O51924 inner membrane protein
MalF, 36.8>
Length = 286
Score = 107 bits (265), Expect = 1e-22
Identities = 80/279 (28%), Positives = 141/279 (49%), Gaps = 19/279 (6%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS---LDTVRRA-----ISDPTFWEALKYTILL 66
P +V LL Y L A+YL+ S D + A + +P W +L T++
Sbjct: 13 PLLVVLLLVSFYTLGYAIYLSVHDIDLMSPPPFDFIGMANFIEVLQEPRMWSSLWNTLVY 72
Query: 67 ALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYGFIN 125
+L+L +AL ++R F G+ L L++P+ ++ + AGLIW + G N
Sbjct: 73 VAGSTVAELVLGSAIALFISRDFFGRKLVRALLLLPMIVTPIVAGLIWRIFYDPNAGLFN 132
Query: 126 KLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAE 185
L +GI PI + G M ++++A++W+ T + +++ AGL + E LEAAE
Sbjct: 133 WLAGLIGI--PPIDWLGNPSTAMA--SLILADIWQWTPFIILLVSAGLDALPSEPLEAAE 188
Query: 186 VFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG---FY 242
+ GA W L I +PM+KP I AL +R + A + F +++++ R P LA E +
Sbjct: 189 LDGARGWRLLAFIKLPMMKPIILMALFLRMIDAFKSFDLIYVMT-RGGPALATETTNMYA 247
Query: 243 QLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLE 281
LT +D+ +++ A+ IA+++ L + F + ++
Sbjct: 248 YLTGFQDFRISA--AVVIAIINTLLVIAVLSFASKKVMK 284
>emb|CAB61917.1| (AL133278) putative transport system permease protein [Streptomyces
coelicolor A3(2)]
Length = 310
Score = 107 bits (265), Expect = 1e-22
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 10/228 (4%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKN-----GAF-SLDTVRRAISDPTFWEALKY 62
P+L P ++ FI YP + L +FT G F L R + D FW L+
Sbjct: 30 PWLFAAPGLLITGAFILYPFVSTLVNSFTDRRTLVPGEFVGLANFRELLHDDMFWIGLRN 89
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
+ L L +VP ++L L+LAL V + G A P+ S V GLIW +L + G
Sbjct: 90 SSLYVLGVVPALVLLPLLLALLVQKNIPGITFFRSAFYTPVVASIVVVGLIWVWLLDERG 149
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+N LL LG SP+ F ++ ++ L+ + VW+ +I LA L + RE E
Sbjct: 150 LVNSLLETLG--GSPVGFLSDQWLIL--LSAMGVTVWKGLGYYMIIYLAALANVPRELHE 205
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
AA V GAG R + +P ++ ++ + ++ A +VF V+++AG
Sbjct: 206 AAAVDGAGAVRRFLTVTVPAVRSTMVLVAALSSVAAFKVFSEVYLMAG 253
>emb|CAB55533.1| (AL117322) putative binding-protein-dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 107 bits (264), Expect = 2e-22
Identities = 75/280 (26%), Positives = 136/280 (47%), Gaps = 18/280 (6%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSL------DTVRRAISDPTFWEALKYT 63
+L L PA++ F YP ++ +Y + T + D R I D FW AL+ T
Sbjct: 38 WLFLAPALLGFALFYAYPTVRGIYYSLTDYSLIATPDFVGGDNYSRLIGDEQFWNALQVT 97
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML-SDYG 122
LV + Q +LALVLA ++R + L L++P + +V GL+W +L ++ G
Sbjct: 98 GYYVLVNIVSQTLLALVLATLMHRLTRSVALRAM-LLVPWLVPNVTVGLLWMWLLDTNLG 156
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+N +L ++G+ ++ F ++ M A+ W T +++ AG+ + + E
Sbjct: 157 LVNHVLNSMGMGTTGF-FTSPDWAMPSVAAV---NTWAYTGYTALLLYAGMLQVPQYLYE 212
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFY 242
+A + GAG W RI +P+L+P + L++ + + Q+F + + + PV A Y
Sbjct: 213 SASLDGAGEWRMFTRITLPLLRPVLSLVLVVSLIGSFQIFDTIAVTT-KGGPVSATRVIY 271
Query: 243 QLTEIKDY-----GVASIYALTIALLSIFLGALYVKFLKA 277
+ + G AS A+ +AL+ L A+ ++ L+A
Sbjct: 272 YYIYEQAFTNFHMGYASAVAVVLALILGVLTAVQMRLLRA 311
>dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter (permease)
[Bacillus halodurans]
Length = 315
Score = 106 bits (263), Expect = 2e-22
Identities = 84/281 (29%), Positives = 137/281 (47%), Gaps = 20/281 (7%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA-------FSLDTVRRAISDPTFWEAL 60
I L L P+++ F+ YP+I+ +YL+F A L+ F ++
Sbjct: 33 IAALYLFPSLLLFSIFLFYPMIRTVYLSFFLTDAQGNAALFVGLENYLYLFQSDPFRKSA 92
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDL--TIYALVIPLTISDVAAGLIWYTML 118
T L L VP ++LAL LAL N +G L TI++ + ++++ A+ +IW +
Sbjct: 93 SATFLFVLYTVPTGVLLALFLALIANEKLRGIGLFRTIFSSTMGMSVA--ASAVIWLFLF 150
Query: 119 SD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMIS 177
G +N +L +GI S P ++ + ++I I +W T F+++L GLQ I
Sbjct: 151 HPTVGILNSILGFIGIDSIP-WLLDPKWAL---ISIAITTIWMNTGFSFLVLLGGLQNID 206
Query: 178 REYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIP 234
+ E+A + GAGY+ +L RI +PML P++ + I + + Q FG V IL G +
Sbjct: 207 QHLYESARIDGAGYFYQLFRITVPMLSPTLFFIITITFIHSFQSFGQVDILTGGGPAEAT 266
Query: 235 VLAGEGFYQLTEIK-DYGVASIYALTIALLSIFLGALYVKF 274
L YQ I +G AS A+ + LL + L + KF
Sbjct: 267 NLIVYSIYQDAFINYQFGTASAQAVILFLLVLLLTLVQFKF 307
>sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1215
>gi|7442715|pir||A71065 probable sugar-binding transport
system permease protein - Pyrococcus horikoshii
>gi|3257632|dbj|BAA30315.1| (AP000005) 292aa long
hypothetical sugar-binding transport system permease
protein [Pyrococcus horikoshii]
Length = 292
Score = 106 bits (263), Expect = 2e-22
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 4 KSKYIPYLLL--TPAVVYLLFFIGYPLIQALYLAFTKNGAF-------SLDTVRRAISDP 54
+S +PY++L PA++ + F+ + ++ +Y++FT L ++ I DP
Sbjct: 3 RSPDLPYIILFLIPALILIGIFVYFAVVWNIYISFTDWRGLIPSYHFVGLAQYKQLIHDP 62
Query: 55 TFWEALKYTILLALVIVPVQLILALVLALAVNRA--FKGKDLTIYALVIPLTISDVAAGL 112
FW +L+ +LL L+ VP L+L L LA+ ++ F+ TIY V+P +S V
Sbjct: 63 IFWTSLRNNLLLILLFVPGSLLLGLFLAILLDMKVRFESGFRTIY--VLPFALSFVVTAT 120
Query: 113 IWYTMLS-DYGFINKLLLNLGI-------ISSPIHFFGYEYRMMEFLAIVIAEVWRATAI 164
+W M G +N L LG+ I+ P + I+IA +W+ +
Sbjct: 121 LWAWMYDPSSGVLNVLFDKLGLDFLKSGWITDP---------KIAMYCIIIALIWQFSGY 171
Query: 165 VFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGV 224
+I LAG++ I E E A + GA W R IVIP L SA ++ +F+++ F
Sbjct: 172 TMIIYLAGIRSIPIEQYEGALIDGASTWQLYRYIVIPQLTKPTLSAFVVLMVFSLKAFDF 231
Query: 225 VWILA----GRDIPVLAGEGFYQLTEIKD---YGVASIYALTIALLSIFLGALY 271
+W+L G +LA E Y+ T K YG A L + L + L LY
Sbjct: 232 IWVLTRGGPGTSTFILAIE-MYKETFAKTNFAYGAAIATILLLMALVVVLPYLY 284
>pir||F72292 glycerol-3-phosphate ABC transporter, permease protein - Thermotoga
maritima (strain MSB8)
>gi|4981667|gb|AAD36197.1|AE001770_9 (AE001770)
glycerol-3-phosphate ABC transporter, permease protein
[Thermotoga maritima]
Length = 302
Score = 104 bits (258), Expect = 1e-21
Identities = 82/294 (27%), Positives = 131/294 (43%), Gaps = 41/294 (13%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWE 58
+ +PYLLL P V + FI +P + +L L+F + F L +R P +
Sbjct: 17 RVLPYLLLLPTFVIITLFIYWPAVYSLRLSFYRITPFGNRMVFVGLRNFQRLFQSPEYLN 76
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML 118
A+K T++ L + + + LA +AL +N G + + P IS AG++W +L
Sbjct: 77 AIKVTVVYVLASLFLTIFLAFFIALLLNMNLPGNRIFRALIFTPYAISPAIAGVLWSFLL 136
Query: 119 SDY-GFINKLLLNLGIISSPIHFFGYEYRMME-----FLAIVIAEVWRATAIVFVIILAG 172
+ G +N +L L FG + + +A++IA VW+ + LAG
Sbjct: 137 NPVVGHVNYILSKL---------FGLQVEWLTTKPYALIAVIIATVWKTLPFDIIFYLAG 187
Query: 173 LQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTL--FAMQVFGVVWILAG 230
LQ I +E +EA+ V GA W R +IV P+L P I L+I L F F ++
Sbjct: 188 LQDIPQELIEASLVEGANSWARTWKIVFPLLSP-ITFYLVIMNLVSFMFSSFAII----- 241
Query: 231 RDIPVLAGEGFYQLTEI----------KDYGVASIYALTIALLSIFLGALYVKF 274
D+ G G Y T I + G A+ ++ + L+ + Y KF
Sbjct: 242 -DVTTKGGPGNYTTTLIYRLYLDAFAFQKIGPAAAQSVILFLIMAIVTIFYFKF 294
>pir||C71123 probable sugar transport system permease protein - Pyrococcus
horikoshii >gi|3257162|dbj|BAA29845.1| (AP000003) 313aa
long hypothetical sugar transport system permease
protein [Pyrococcus horikoshii]
Length = 313
Score = 103 bits (254), Expect = 3e-21
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 20/239 (8%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAF-------------TKNGAFSL-DTVRRAISDP- 54
Y L++ AV + F + +I A YL+F +N D +R P
Sbjct: 21 YTLISMAVFLNILFGYFAMIFAFYLSFFEWDYIGKMHFVGLRNFEIMFRDLIRGMKGAPY 80
Query: 55 ---TFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAG 111
F+ LK T+L L++VP Q ILA++LA N+ KG+ + +P T S V
Sbjct: 81 LLSPFYTGLKNTLLYTLIVVPTQTILAIILAAFANQKIKGQQFFKVSYFLPATTSSVIIS 140
Query: 112 LIWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILA 171
LI+ + GFIN +L+++ PI + ++ R + + AI + +W + V LA
Sbjct: 141 LIFIWLFMRNGFINYVLVHVIPGFHPIDWI-HDRRYLLY-AISLVAIWGTSGHFMVSFLA 198
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
+Q I RE EAA + GAG R I IPML+P I +++ + A+Q+F + W++AG
Sbjct: 199 AMQAIPREIYEAAMLDGAGPIRRFIYITIPMLRPMIVYVVVMGLIGALQMFDLAWVMAG 257
>emb|CAB95276.1| (AL359779) putative sugar transport integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 321
Score = 102 bits (252), Expect = 5e-21
Identities = 73/284 (25%), Positives = 129/284 (44%), Gaps = 24/284 (8%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTK-------------NGAFSLDTVRRAISDPTFWEA 59
+ PAVV++L F GYPL++ + ++F NGA D D F +A
Sbjct: 42 VAPAVVFMLLFFGYPLVRNVVMSFQDYTPKTFFTGEAPFNGA---DNWSNVFQDALFGKA 98
Query: 60 LKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS 119
L +T++ + Q + L LA+ +R F + +++P + V +G++W +L
Sbjct: 99 LWHTLVFTAGSLLGQFCIGLALAVFFSRRFPLNGVLRSLILLPWLVPMVVSGIVWRRILD 158
Query: 120 -DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
D G +N L LGI E M L++++ +W VI+ GLQ I +
Sbjct: 159 QDTGVLNSFLDTLGIGGHTPWLTSPE---MALLSVILVNIWIGIPFNMVILYGGLQEIPK 215
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIPV 235
E EAA + GA W R + +PMLKP + L++ + +++ ++ L D
Sbjct: 216 ELHEAAALDGASAWRTFRSVTLPMLKPVVTVVLVLGFMSTVKILDLILALTDGGPADATQ 275
Query: 236 LAGEGFYQLTEIK-DYGVASIYALTIALLSIFLGALYVKFLKAE 278
G YQ + ++ D+G ++ + L+S Y++ + E
Sbjct: 276 TLGTLTYQNSFVQLDFGAGAVVGNVLILISAVFAVFYLRANRTE 319
>gb|AAK41271.1| Maltose transport inner membrane protein [Sulfolobus solfataricus]
Length = 275
Score = 102 bits (251), Expect = 6e-21
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 16/273 (5%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTK-NGAFSLDTVRRAISDPTFWEALKY 62
K K +LL+ PA+ Y++ F +P I+A+YL+F +G FSL + +S A+
Sbjct: 3 KVKLTFFLLVLPALAYVISFAFFPTIEAVYLSFQDPHGGFSLYNYKE-LSYFNLSSAIIN 61
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW-YTMLSDY 121
TI++ + + +QL L ++A ++R F GK +IP+ I+ V A + + + +
Sbjct: 62 TIVVTIGALAIQLALGFLVASVLSREFFGKRALSTITIIPMGIATVVAAVTFSFVFQTSG 121
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYL 181
G+ N +L +L ++ Y+ + L ++IA+ W+ T IV +I+LAG+ I +E
Sbjct: 122 GYANTILHSL----FGLNVNWYQSSISSLLVVMIADSWKNTPIVALILLAGMSSIPKELY 177
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGF 241
A+ + GAG R I +P L+ I +LI+R + +F + IL G P+L
Sbjct: 178 YASAIDGAGPIRRFFYITLPNLRSFIGISLILRGVQEFNIFALPLILIGEHPPLLT---- 233
Query: 242 YQLTEIKDYGVASIYALTIALLS--IFLGALYV 272
T I D + + +AL S I LG + V
Sbjct: 234 ---TLIYDLYTTTFPEVGLALASATILLGFILV 263
>gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida]
Length = 294
Score = 102 bits (251), Expect = 6e-21
Identities = 56/232 (24%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
Query: 7 YIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-------SLDTVRRAISDPTFWEA 59
Y ++ + PA++ + YP + +++ +FT L R +SDP FW +
Sbjct: 8 YTRWIFVLPAILVVSVLFIYPFLSSIFYSFTNKNLIMPHYSFVGLANYRAVLSDPNFWMS 67
Query: 60 LKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS 119
++ + + Q+++ LALA+NR K L L+IP + W +L+
Sbjct: 68 FFNSLKWTIFSLTGQVLVGFFLALALNRVKHFKWLYKILLIIPWAFPTIVIAFSWQWILN 127
Query: 120 D-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
YG++ +L+ LG++ +F R F+ +V +W ++ V +L+ LQ +
Sbjct: 128 GVYGYLPNMLVQLGLMEIAPNFLSD--RTWAFVCLVFINIWFGAPMIMVNVLSALQTVPT 185
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
+ EAA++ GA W R I +P +K + +++RT++ F +++++ G
Sbjct: 186 DQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITG 237
>pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307|gb|AAC00385.1|
(AF008220) sugar transporter [Bacillus subtilis]
>gi|2635512|emb|CAB15006.1| (Z99119) amyD [Bacillus
subtilis]
Length = 303
Score = 101 bits (250), Expect = 8e-21
Identities = 70/219 (31%), Positives = 110/219 (49%), Gaps = 12/219 (5%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWEALKYTILLA 67
PA++ +L F+ YP ++ + FT FS R SDP W LK T+
Sbjct: 27 PALLSVLVFMIYPFVKGTLITFTNWNGFSQVYQWVGFAQYERLFSDPDTWHILKNTLHYG 86
Query: 68 LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYGFINK 126
L Q ++ L+ AL +N++ K K +T + +P+ IS + G IWY S D G +N
Sbjct: 87 LGSTFFQNVVGLLYALLLNQSIKTKAVTRTIVYLPVMISPLIMGYIWYFFFSYDGGALND 146
Query: 127 LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEV 186
LL GI SPI+ + IV+ ++ I V+ LAGLQ I ++Y EAA++
Sbjct: 147 LLGVFGI--SPINALASP--SLNPWIIVMINTYQYVGIAMVVYLAGLQSIPKDYYEAAQM 202
Query: 187 FGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVV 225
GA + I +P+L PSI ++I + +++F V+
Sbjct: 203 DGAKQGQQFFTITLPLLMPSITINIVINIIGGLKLFDVI 241
>pir||T35790 probable transmembrane sugar transport protein - Streptomyces
coelicolor >gi|3288623|emb|CAA19795.1| (AL031013)
putative transmembrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 342
Score = 101 bits (249), Expect = 1e-20
Identities = 77/287 (26%), Positives = 140/287 (47%), Gaps = 25/287 (8%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-----------SLDTVRRAIS-DPT 55
+PYLLL PA++ L P++ + ++F + F LD ++ D
Sbjct: 38 LPYLLLLPALLLELLVHLVPMVIGIVMSFKELTQFYIRDWTTAPWAGLDNFTMSVDFDAP 97
Query: 56 FWEALKYTILL--ALVIVPVQL--ILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAG 111
EAL ++ L+ A I+ V L ++ A+ + AF+G+ L ++P + AA
Sbjct: 98 VGEALLHSFLVTCAFTILSVGLCWLIGTAAAICMQDAFRGRGLLRAIFLVPYALPVYAAV 157
Query: 112 LIWYTMLS-DYGFINKLLLN-LGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVII 169
+ W M D G +N +L + LG+ P + + F+A+++ VW+ F+I+
Sbjct: 158 ITWAFMFQHDNGLVNHVLHDQLGLTDKPSFWLIGDN---SFVALLVVSVWKGWPFAFLIV 214
Query: 170 LAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA 229
+AGLQ I +E EAA + GAG W ++RRI +P L+P Q +++ L+ F ++L
Sbjct: 215 MAGLQNIPKELYEAAALDGAGVWQQIRRITLPSLRPVNQVLVLVLFLWTFNDFNTPFVLF 274
Query: 230 GRDIPV---LAGEGFYQLTEIK-DYGVASIYALTIALLSIFLGALYV 272
G+ P L YQ + + ++G S ++ + L + + +Y+
Sbjct: 275 GKAAPEAADLISIHIYQSSFVTWNFGAGSAMSVLLLLFLLLVTGVYL 321
>pir||G75206 maltodextrin transport system permease protein PAB0120 - Pyrococcus
abyssi (strain Orsay) >gi|5457611|emb|CAB49102.1|
(AJ248283) MALTODEXTRIN TRANSPORT SYSTEM PERMEASE
PROTEIN [Pyrococcus abyssi]
Length = 302
Score = 101 bits (249), Expect = 1e-20
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 27/271 (9%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFT----------KNGAFS---LDTVRRA 50
K+ +L+ P + LFF +P+I ++YLAFT K G L+ +
Sbjct: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
Query: 51 ISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVA 109
+SD F A K+T + V +++++ + L+L N + +GK + L+IP + +
Sbjct: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
Query: 110 AGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVI 168
+ +W M +G IN+LL ++GI S+P ++ + FLA+ I EVW A + +
Sbjct: 128 SITVWKFMFDPVFGPINQLLKSIGI-SNPPNWINDPF--WAFLALNIIEVWLAYPFMMTV 184
Query: 169 ILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
I A LQ + +EAA + GA YW R R +++P + I A I+ + + Q F V
Sbjct: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV---- 240
Query: 229 AGRDIPVLAGEGFYQLTEIKDYGVASIYALT 259
P L G ++ I YG + T
Sbjct: 241 -----PYLYNAGLFEDKFILLYGFRKAFGAT 266
>dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Bacillus halodurans]
Length = 300
Score = 101 bits (248), Expect = 1e-20
Identities = 79/291 (27%), Positives = 131/291 (44%), Gaps = 19/291 (6%)
Query: 3 IKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPT 55
I+ + Y LTPA+V + FI P++ A+YL+F K + + R D
Sbjct: 11 IREAFQGYAFLTPALVTIGVFILLPILYAIYLSFQKVNLLAGFSEFVGFNNYARITDDYR 70
Query: 56 FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWY 115
AL+ T ++VP Q ILAL+LA +N KG + +P S LI+
Sbjct: 71 AGIALRNTAFYVAIVVPTQTILALILAACLNAKIKGTNFFRVVFFLPTLTSSAVLALIFM 130
Query: 116 TMLSDY-GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQ 174
M ++ G +N++L +LG+ + ++ G + LAI+I +W VI LA L+
Sbjct: 131 FMYNNQNGLVNQVLASLGLPT--YNWLGDP--SVALLAIMIMNIWATAPFYMVIYLAALK 186
Query: 175 MISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---- 230
I EAA++ GA + R I +PML+P +I+ + Q+F +I +G
Sbjct: 187 DIPASLYEAADLDGASTIQKFRYITVPMLRPITSFVVIMGIIGTFQLFDQSYIFSGGSGG 246
Query: 231 ---RDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
+ ++ Y G A+ A +A++ + + KF K E
Sbjct: 247 PDNSTLTIVLLIYQYAFQSYDQMGYAAALAFLLAVIILIATLIQRKFQKNE 297
>pir||B69588 L-arabinose transport (integral membrane protein) araP - Bacillus
subtilis >gi|1770020|emb|CAA99593.1| (Z75208)
hypothetical protein [Bacillus subtilis]
>gi|2635339|emb|CAB14834.1| (Z99118) integral membrane
protein [Bacillus subtilis]
Length = 313
Score = 100 bits (247), Expect = 2e-20
Identities = 85/282 (30%), Positives = 135/282 (47%), Gaps = 24/282 (8%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTK--NGAFSLDTVRR--AISDPTF----W 57
K PYL P V+ L F YP+I ++F + G S + A+++PTF W
Sbjct: 29 KAAPYLFTAPFVLSFLVFFLYPIISVFIMSFQRILPGEVSFVGLSNYTALNNPTFYTALW 88
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
L+YT +V++PV L+LA+ L ++ K +++ AL IP S + AG+I+ +
Sbjct: 89 NTLEYTFWTLIVLIPVPLLLAIFLN---SKLVKFRNIFKSALFIPALTSTIVAGIIFRLI 145
Query: 118 LSDY--GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+ N +LL LG SP ++ E+ M FL +++A WR I + LAGLQ
Sbjct: 146 FGEMETSLANSILLKLGF--SPQNWMNNEHTGM-FLMVLLAS-WRWMGINILYFLAGLQN 201
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP- 234
+ +E EAA++ GA + I +P LKP L I + ++F ++L + P
Sbjct: 202 VPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFEESYVLWQNNSPG 261
Query: 235 ----VLAGEGFYQLTEIKD--YGVASIYALTIALLSIFLGAL 270
L G + Q + YG A L I +L + L +L
Sbjct: 262 NIGLTLVGYLYQQGLAYNEMGYGAAIGIVLLIVILVVSLISL 303
>emb|CAB86098.1| (AL163003) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 100 bits (247), Expect = 2e-20
Identities = 64/223 (28%), Positives = 103/223 (45%), Gaps = 26/223 (11%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGA-------FSLDTVRRAISDPTFWEALKYTIL 65
+ P + F+ +PL++ LYL+FT LD R A+ DP W+AL ++
Sbjct: 37 VAPFLALFALFVVWPLLRGLYLSFTDANISGDSANFIGLDNYREALKDPLMWDALGHSAY 96
Query: 66 LALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD-YGFI 124
L++VP +LAL+LA+ + +GK L +P + A +W + + G +
Sbjct: 97 FTLLVVPCITVLALLLAMLAHHIERGKWLWRLCFFLPFLLPSTVAANLWQWLFNPGTGMV 156
Query: 125 NKLLLNLGIISSPIHFFGYEY-----RMMEFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
N H FG E + LA+VI +W F++ LA LQ I
Sbjct: 157 N-------------HVFGLETPWLTDKSYAMLAVVITTLWWTVGFSFLLYLAALQGIPAH 203
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVF 222
EAA++ GA W R+ I +PML+ + ++ L ++QVF
Sbjct: 204 LYEAAKLDGANAWHRILHITLPMLRNITGLVVALQILASLQVF 246
>sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESP
>gi|7442702|pir||G69796 lactose permease homolog yesP -
Bacillus subtilis >gi|2633011|emb|CAB12517.1| (Z99107)
similar to lactose permease [Bacillus subtilis]
Length = 309
Score = 99.8 bits (245), Expect = 3e-20
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 12/249 (4%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAIS-DPTF 56
K Y ++P ++ L F P+ +L+L+FT F+ LD + + D +
Sbjct: 17 KDNLAGYAFISPFIIGFLCFTVIPMGASLFLSFTSYDLFTAPKWIGLDNFKEMFTGDEKY 76
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTIS-DVAAGLIWY 115
W++LK T L VP++L AL +A+ +N A KG + +P I VA ++W
Sbjct: 77 WQSLKVTFTYVLAGVPLRLGFALFIAVILNNAAKGTAIYRTLFYLPSIIGGSVAVAIMWR 136
Query: 116 TMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+ + G IN LL +GI Y+ +++ VW+ + + +I LAGL+
Sbjct: 137 NIFGNDGVINALLFFVGIDQK---ILWYQNPTSALWTLILLSVWQFGSSM-LIFLAGLKN 192
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPV 235
I YLEAA V GA R +I +P+L P I L+++T+ A F +I++ +
Sbjct: 193 IPSSYLEAASVDGANRVQRFFKITLPILTPIIFFNLVMQTISAFMTFTPAYIISKGEGGP 252
Query: 236 LAGEGFYQL 244
L G Y L
Sbjct: 253 LDGTLLYSL 261
>emb|CAA61935.1| (X89810) putative integral membrane protein [Bacillus subtilis]
Length = 313
Score = 99.5 bits (244), Expect = 4e-20
Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 24/282 (8%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTK--NGAFSLDTVRR--AISDPTF----W 57
K PYL P V+ L F YP+I ++F + G S + A+++PTF W
Sbjct: 29 KAAPYLFTAPFVLSFLVFFLYPIISVFIMSFQRILPGEVSFVGLSNYTALNNPTFYTALW 88
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
L+YT +V++PV L+LA+ L ++ K +++ AL IP S + AG+I+ +
Sbjct: 89 NTLEYTFWTLIVLIPVPLLLAIFLN---SKLVKFRNIFKSALFIPALTSTIVAGIIFRLI 145
Query: 118 LSDY--GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+ N +LL LG SP ++ E+ M FL +++A W+ I + LAGLQ
Sbjct: 146 FGEMETSLANSILLKLGF--SPQNWMNNEHTGM-FLMVLLAS-WKWMGINILYFLAGLQN 201
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP- 234
+ +E EAA++ GA + I +P LKP L I + ++F ++L + P
Sbjct: 202 VPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFEESYVLWQNNSPG 261
Query: 235 ----VLAGEGFYQLTEIKD--YGVASIYALTIALLSIFLGAL 270
L G + Q + YG A L I +L + L +L
Sbjct: 262 NIGLTLVGYLYQQGLAYNEMGYGAAIGIVLLIVILVVSLISL 303
>pir||D72395 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980776|gb|AAD35366.1|AE001710_1
(AE001710) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 294
Score = 99.1 bits (243), Expect = 6e-20
Identities = 64/235 (27%), Positives = 122/235 (51%), Gaps = 16/235 (6%)
Query: 3 IKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAF--------TKNGAFSLDTVRRAISDP 54
++ + +P+L++ P + L YP ++ +F + L + D
Sbjct: 1 MRKRIVPWLMVLPVLALFLAMTIYPFGFMIWASFRDYDLSKSAETHFIGLSNYFQIFRDS 60
Query: 55 TFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW 114
T E++K+T L + VPV+L+L +++A + R KG+ + +L+IP+ I +G+ W
Sbjct: 61 TAIESMKFTAKLLSIAVPVELVLGVLIAFLI-RGVKGEKIIRSSLLIPMMIPPAVSGVAW 119
Query: 115 YTMLSDYGF--INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAG 172
ML ++ F +N L G+ I + G + L I+I +VW+ T +F++I AG
Sbjct: 120 -KMLYNFAFGPVNWFLSLFGV--PKISWLGDPFYAQ--LGIIIIDVWQWTPFIFLMIYAG 174
Query: 173 LQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
LQ I ++ ++AA V GA + + P+L+P I AL++R + ++ F +V++
Sbjct: 175 LQSIPQDLIDAARVDGADWGRVFLHVEFPLLRPLILVALVLRIIDCLKTFDIVFM 229
>dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane protein
[Thermococcus sp. B1001]
Length = 231
Score = 99.1 bits (243), Expect = 6e-20
Identities = 67/219 (30%), Positives = 112/219 (50%), Gaps = 20/219 (9%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFT--KNGAF-------------SLDTVRRAISDPTF 56
L+ P ++ LFF YP++ ++Y+AFT K G F L+ R A+SDP F
Sbjct: 11 LILPGMIAFLFFNIYPILYSIYIAFTNAKLGNFPIQAPTAEPLRFVGLENFRWALSDPKF 70
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVAAGLIWY 115
A +T + V +++++ ++L++ N + KGK L+IP + + + ++W
Sbjct: 71 RSAFVWTWVFVATSVTLKVVVGILLSVLYNNKYVKGKFFYRALLIIPWALPLLFSVMVWR 130
Query: 116 TMLSDY-GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQ 174
M G IN +L +LGI + P + F+A+ I EVW A + +I + LQ
Sbjct: 131 FMFDPVVGPINIMLRDLGITNPPDWMTSVTWG---FVALNIIEVWLAYPFMMTVITSALQ 187
Query: 175 MISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALII 213
+ +EAA + GA YW RL ++VIP++ I A I+
Sbjct: 188 SVPDTLIEAAIIDGANYWQRLTKVVIPIVSKPIAFATIL 226
>pir||D82557 ABC transporter sugar permease XF2447 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107640|gb|AAF85246.1|AE004053_9 (AE004053) ABC
transporter sugar permease [Xylella fastidiosa]
Length = 293
Score = 98.3 bits (241), Expect = 9e-20
Identities = 74/231 (32%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFSL-----------DTVRRAISDPTFWEALKYT 63
PAV+ + F G P++ AL L+ T ++L D + P FW+AL T
Sbjct: 14 PAVLVIGMFFGVPVLMALVLSLTDFDLYALANPMYLRFVGLDNYLELLHTPLFWKALWNT 73
Query: 64 ILLALVIVPVQLILALVLALAVN-RAFKGKDLTIYALVIPLTISDVAAGLIW-YTMLSDY 121
L+ +P+ + ++L AL +N RA + K L L P+ + VA LIW Y Y
Sbjct: 74 TYFVLLGMPMSITVSLGAALLLNSRAARFKGLFRTVLFAPVVTTLVAVALIWRYLFHLKY 133
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYL 181
G +N LL +GI PI + G + M I++ VW+ VI LAGLQ I ++
Sbjct: 134 GVVNWLLNCVGI--HPIDWLGDPHLAMPM--IMLFAVWKNFGYNMVIFLAGLQAIPQDLY 189
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRD 232
EAA + GA W + I +PML P + II Q+F +++ D
Sbjct: 190 EAARIDGASKWQQFLHITLPMLGPVLMVVGIITVSGYFQLFAEPYVMTRGD 240
>emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaerobacter brockii]
Length = 303
Score = 97.5 bits (239), Expect = 2e-19
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 2 NIKSK------YIPYLLLTPAVVYLLFFIGYPLIQALYLAFTK----NGAF---SLDTVR 48
N+KSK Y Y+ P +V L F YPLI YL+ T N ++ L +
Sbjct: 5 NLKSKSKINKNYYGYIFTLPFIVIFLVFNLYPLIYTFYLSLTDMTLMNSSYHFVGLANFK 64
Query: 49 RAISDPTFWEALKYTILLALVIVPVQLILALVLAL-AVNRAFKGKDLTIYALV--IPLTI 105
+ SD F +++ T + L+ QL +A++LA+ VN K K + ++ + +P +
Sbjct: 65 QLFSDNYFLKSVINTWKIWLINFIPQLTIAMLLAIWFVNNRLKIKFIGLWRTIYYLPNIL 124
Query: 106 SDVAAGLIWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEV--WRATA 163
VA ++Y S YG +N++ + GI+ FF R + +++A + W
Sbjct: 125 MPVAVAALFYNFFSLYGPVNQIAVRTGILKEAFDFF----RSTTWTQLIVAFIQWWMWYG 180
Query: 164 IVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG 223
+ ++++AGL IS Y E+A V GA W +I +P+LKP + L+ MQ+F
Sbjct: 181 VTIILLMAGLSSISPSYYESALVDGANSWQMFTKITLPLLKPVLIYVLVTSLSGGMQMFD 240
Query: 224 VVWIL 228
+ ++L
Sbjct: 241 IPYLL 245
>emb|CAB59596.1| (AL132662) probable sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 316
Score = 97.5 bits (239), Expect = 2e-19
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 23/269 (8%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAF------TKNGAFSLDTVRRAISDPTFWEALKYT 63
+ ++PAV+ +L P++ +L L+F T + LD R DP F +A++ T
Sbjct: 32 WAFVSPAVLIVLGLSIVPVVWSLLLSFQASDLVTPSRWVGLDNYRALAQDPNFSQAVRNT 91
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYG 122
+L ++ VP+ L+ L LA+ +NR + L + +P +S A G+++ +L ++G
Sbjct: 92 LLYTVLYVPLSLLFGLALAMVLNRRIRFVGLYRTLIFVPFVLSATAQGVLFSFILDPEFG 151
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIA-EVWRATAIVFVIILAGLQMISREYL 181
N +L LG+ S G+ + L +++A +W T V+ LA LQ + + +
Sbjct: 152 AANSVLHRLGVSSQ-----GFLSDPSQALLVLVAITLWSGTGFCVVVYLAALQDVPQSLI 206
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI------LAGRDIPV 235
EAA + GAG LR + +P L P ++ + + ++QVF +V++ L + V
Sbjct: 207 EAARLDGAGRRHLLRHVTMPTLTPVTVFLVLWQAIQSLQVFDLVYVTTKGGPLGSTTVIV 266
Query: 236 --LAGEGFYQLTEIKDYGVASIYALTIAL 262
+ + F T YG ++ Y L +AL
Sbjct: 267 YFIWEQAFKNAT--AGYGASAAYVLAVAL 293
>dbj|BAB04837.1| (AP001511) lactose transport system (permease) [Bacillus
halodurans]
Length = 318
Score = 96.7 bits (237), Expect = 3e-19
Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGY---PLIQALYLAFTKNGAFSL-------DTVRRAISD 53
K ++ Y +++P +LL F G P+I +LY +FT S + + SD
Sbjct: 27 KESFVGYAMISP---WLLGFFGLVIGPMIASLYFSFTDYDMLSSANWVGLQNYIHIFTSD 83
Query: 54 PTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTIS-DVAAGL 112
P F ++LK T++ V P++L AL LA+ N KG L IP I VA +
Sbjct: 84 PRFVQSLKVTLIFVFVPTPLKLAFALFLAMLFNTGRKGSGLFSTIYYIPSIIGGSVAVAV 143
Query: 113 IWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAG 172
+W + G +N L G S +++ G + L +++ VW+ + + +I LAG
Sbjct: 144 VWKQLFGSRGAVNSFLELFGF--SGVNWIGSTDYALSILILLV--VWQFGSPM-IIFLAG 198
Query: 173 LQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG-- 230
L+ I +E EAA V GA + + I +PML P I LI++T+ F +++ G
Sbjct: 199 LRQIPQELYEAASVDGANSFRKFFSITLPMLTPVIFFNLIMQTIGGFMTFTQAYLITGGG 258
Query: 231 -RDIPVLAGEGFYQLT-EIKDYGVASIYALTIALLSIFLGALYVKFLKAEY 279
D + Y++ E G AS A+ LL I G +V F + Y
Sbjct: 259 PLDSTLFYAVYLYEVAFEYLRMGYAS--AMAWILLVIIGGITFVFFKSSSY 307
>pir||G70943 hypothetical protein Rv2040c - Mycobacterium tuberculosis (strain
H37RV) >gi|2896777|emb|CAA17254.1| (AL021899)
hypothetical protein Rv2040c [Mycobacterium
tuberculosis]
Length = 300
Score = 96.3 bits (236), Expect = 4e-19
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAI-SDPTFWEALKYTIL 65
L VV++LF +G+ +LY++F K F+ LD R SDP F A+ T +
Sbjct: 20 LAAVVVFMLFPLGF----SLYMSFQKWDLFTHATFVRLDNFRNLFTSDPLFLIAVVNTAV 75
Query: 66 LALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW-YTMLSDYGFI 124
+ V +I++LV+A +NR KG L + +PL IS V ++W + +D G +
Sbjct: 76 YTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMAVVWQFVFNTDNGLL 135
Query: 125 NKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
N +L LGI PI + E R +++ + VWR+ V++LA +Q + EAA
Sbjct: 136 NIMLGWLGI--GPIPWL-IEPR-WAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAA 191
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRD------IPVLAG 238
+ GAG + I +P+++ ++ ++I + A Q F +V++L G + VL
Sbjct: 192 RIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGGPETATYVLGI 251
Query: 239 EGFYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
F ++G AS A + + + L L ++
Sbjct: 252 MLFQHAFSFLEFGYASALAWVMFAILLVLTVLQLR 286
>pir||T37130 probable transport system integral membrane protein - Streptomyces
coelicolor >gi|5738807|emb|CAB52981.1| (AL109950)
putative integral membrane permease [Streptomyces
coelicolor A3(2)]
Length = 319
Score = 96.0 bits (235), Expect = 5e-19
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 21/274 (7%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAF---TKNGAFS-LDTVRRAISDPTFWEALKYTILLAL 68
+ PAV+ + F+ P + +Y +F T+ FS D SDP +++ T++ +
Sbjct: 46 MAPAVLLVALFLLAPFVWTIYRSFFSDTRTSPFSWFDNYSLFASDPALSRSIQNTLMWVV 105
Query: 69 VIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL 128
V + +L L +A N A + L +V+P +S A ++W ML+ G +N++L
Sbjct: 106 GTVALPFVLGLAIACMTN-AGRFSRLARLCVVLPYALSGSAVAVVWNFMLTTDGAVNQVL 164
Query: 129 LNLGIISSPIHFFGYEYRMM-EFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVF 187
LG+ S G+ + +++A W+AT + ++ L GLQ I E LEA +
Sbjct: 165 TALGLDSLAQ---GWLLTWPGNTVVMILANAWQATGVAVILFLVGLQSIPPETLEAGALD 221
Query: 188 GAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA----GRDIPVLA----GE 239
GA W + R IV+P L+P + + + ++ F ++W+L GR LA E
Sbjct: 222 GASGWQQFRHIVLPQLRPVSIIVIGMSLVNGLKSFDLIWVLTQGGPGRATETLAVSMYNE 281
Query: 240 GFYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
F +L G + A+ + ++ + LY++
Sbjct: 282 TFLELRP----GAGAAIAVVLTVIVLAASWLYLR 311
>pir||T03552 maltose transport inner membrane protein - Rhodobacter capsulatus
>gi|3128353|gb|AAC16205.1| (AF010496) maltose transport
inner membrane protein [Rhodobacter capsulatus]
Length = 290
Score = 95.6 bits (234), Expect = 6e-19
Identities = 58/226 (25%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTK--------NGAFSLDTVRRAISDPTFWEALKY 62
L+++PAV+ LL ++ PL L+ + + G LD R ++DP F++A++
Sbjct: 12 LMISPAVLLLLGWMIIPLAMTLWFSMQRYNLLMPGMGGFTGLDNYRYFLTDPAFFDAIRN 71
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
T++L L ++ + + L+LAL +++ F G+ + ++ P + + L+W M
Sbjct: 72 TLVLVLGVLAITTLGGLLLALLLDQPFWGQGILRVLVIAPFFVMPTVSALVWKNM----- 126
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLA-IVIAEVWRATAIVFVIILAGLQMISREYL 181
F+N + ++ Y++ LA +V+ W+ +I+L LQ + E L
Sbjct: 127 FLNPVNGLFAHLAKSFGLQPYDFLAQSPLASVVLIVAWQWLPFATLILLTALQSLDSEQL 186
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
EAAE+ GAG + R +++P L +I ++I+T+F + F + +
Sbjct: 187 EAAEMDGAGPFARFFHVMLPHLARAITVVILIQTIFLLSTFAEILV 232
>pir||B71369 probable sugar ABC transporter, permease protein (y4oQ) - syphilis
spirochete >gi|3322334|gb|AAC65070.1| (AE001192) sugar
ABC transporter, permease protein (y4oQ) [Treponema
pallidum]
Length = 296
Score = 95.6 bits (234), Expect = 6e-19
Identities = 74/278 (26%), Positives = 131/278 (46%), Gaps = 20/278 (7%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAF---------TKNGAFSLDTVRRAISDPTFWEAL 60
Y PA+V L+F + P L ++F T+ + R S FW ++
Sbjct: 15 YCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPVFVGFENYRELFSSIHFWASV 74
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW-YTMLS 119
+ T++ L +V ++++L L LAL + G V+P+ I+ V G++W +
Sbjct: 75 RTTLVFTLSVVVLEVVLGLALALVLEHGVPGLRFFRTVFVLPMMIAPVVVGVLWGFLYHP 134
Query: 120 DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
+G IN L + P+ + + L++++ +VW+ T VF+++LAGLQ I +
Sbjct: 135 QFGKINYALQAFEL--GPVLWLANP--RLALLSVILTDVWQWTPFVFLVLLAGLQGIPQH 190
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGE 239
L AA+V GA Y L I IP + P + A ++R + + + V+ L P +A E
Sbjct: 191 LLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLVVIMTLTNGG-PGVATE 249
Query: 240 GF---YQLTEIKDY--GVASIYALTIALLSIFLGALYV 272
Q +D+ G AS A+ + LL+ L +++
Sbjct: 250 ILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFI 287
>emb|CAB61807.1| (AL133236) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 315
Score = 95.6 bits (234), Expect = 6e-19
Identities = 67/280 (23%), Positives = 129/280 (45%), Gaps = 29/280 (10%)
Query: 5 SKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA------FSLDTVRRAISDPTFWE 58
SK +L P++ L+ YPL A+ + G L+ A+ DP FWE
Sbjct: 31 SKKTMAAMLAPSIFLLIALNAYPLFYAVSQSLRDGGIAGPGEFIGLENYTTALQDPAFWE 90
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW-YTM 117
A+++T+L +V V V ++ LAL + R+F G+ + L++P + V + W + +
Sbjct: 91 AVRFTLLFTVVSVFVAWVIGTALALVLRRSFPGRSVFRVLLLLPWVVPVVVSTTSWNFLV 150
Query: 118 LSDYGFINKLLLNLG-----IISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAG 172
+ + LL LG I+++P ++I ++W + +++ +
Sbjct: 151 ATPSSPVPTLLRELGFGDVQILANP---------GSAMAIVIIFKIWGTVPFMMMMMSSA 201
Query: 173 LQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG-- 230
LQ + EA + GA W R+R +++P++ + A ++ ++F + F V++L G
Sbjct: 202 LQAVDPSVEEACRLDGASRWQRIRHVILPIMSKPVYIAWVLASIFTINDFPSVFLLTGGG 261
Query: 231 -----RDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSI 265
+ V A +Q YGVA + +T AL+++
Sbjct: 262 PVGSTSTLVVFAYRLVFQDFR-TGYGVAVAFLITTALIAM 300
>gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae]
Length = 294
Score = 95.2 bits (233), Expect = 8e-19
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-------SLDTVRRAISDPTFWEALKY 62
++ + PA++ + YP +++ +FT L + +SDP F+ A
Sbjct: 10 WIFVLPAMIIVGLLFVYPFFSSIFYSFTNKHLIMPNYKFVGLANYKAVLSDPNFFNAFFN 69
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD-Y 121
+I + + Q+++ VLALA++R K L L++P + W +L+ Y
Sbjct: 70 SIKWTIFSLVGQVLVGFVLALALHRVRHFKKLYRTLLIVPWAFPTIVIAFSWQWILNGVY 129
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYL 181
G++ L++ LG++ F FL +V +W ++ V +L+ LQ + E
Sbjct: 130 GYLPNLIVKLGLMEHTPAFLTDS--TWAFLCLVFINIWFGAPMIMVNVLSALQTVPEEQF 187
Query: 182 EAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
EAA++ GA W + IV P +K + +++RT++ F +++++ G
Sbjct: 188 EAAKIDGASSWQVFKFIVFPHIKVVVGLLVVLRTVWIFNNFDIIYLITG 236
>sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OQ
>gi|2182561|gb|AAB91803.1| (AE000089) Y4oQ [Rhizobium
sp. NGR234]
Length = 309
Score = 95.2 bits (233), Expect = 8e-19
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFT---------KNGAFSLDTVRRAISDPTFWEALKYTIL 65
PA +L +G PL+ + Y + T L + FW A++ T++
Sbjct: 31 PAAAIMLLVLGVPLVYSFYYSLTGWSLVVPGSDQDFIGLLNYTDVLRSSEFWAAIRVTLI 90
Query: 66 LALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYGFI 124
A+V V ++ L ++ A+ +N F G+ L ++IP+ I+ G+ W + D G
Sbjct: 91 YAVVAVSLECALGILFAVLLNLEFFGRGLFRSLMLIPMVITPAVVGIFWKLLYEQDSGVF 150
Query: 125 NKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
N LL LG P+ + + +++I +VW++T +IILAGLQ + R+ + AA
Sbjct: 151 NYLLGTLGF--EPVPWLSLTVALA---SVIIVDVWQSTPFFTLIILAGLQSLDRDTVSAA 205
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
+ GA R + +P L P I A R + M F +++L
Sbjct: 206 QADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVMADFDKIFLL 249
>sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJO
>gi|7442722|pir||B64880 probable multiple sugar
transport protein b1311 precursor - Escherichia coli
>gi|1742149|dbj|BAA14887.1| (D90769)
Sn-glycerol-3-phosphate transport system permease
protein UgpA. [Escherichia coli]
>gi|1787570|gb|AAC74393.1| (AE000229) putative
binding-protein dependent transport protein [Escherichia
coli K12]
Length = 293
Score = 94.4 bits (231), Expect = 1e-18
Identities = 64/271 (23%), Positives = 129/271 (46%), Gaps = 17/271 (6%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTK--------NGAFSLDTVRRAISDPTFWEALKY 62
LLL P+++ L + +P++ + ++F + + + R +SDP FW +L
Sbjct: 16 LLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGFWHSLWM 75
Query: 63 TILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD-Y 121
T+ ++V +L L +A+ NR F+ + +++ ++ W M ++ Y
Sbjct: 76 TVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNNGY 135
Query: 122 GFINKLLLNLGII--SSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
G +N L ++L + +P+ F + F+ +V+ +WR F+ LA LQ I +
Sbjct: 136 GIVNYLGVDLLHLYEQAPLWF---DNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKS 192
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGE 239
EAAE+ GA W R R + +P + P + + + +RT++ +F V++L + + +L
Sbjct: 193 LYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTK-VDILGVY 251
Query: 240 GFYQLTEIKDYGVASIYALTIALLSIFLGAL 270
+ D G A+ A+++ L I +
Sbjct: 252 LYKTAFAFNDLGKAA--AISVVLFIIIFAVI 280
>emb|CAB88145.1| (AL352956) putative binding protein dependent transport protein
(fragment). [Streptomyces coelicolor A3(2)]
Length = 288
Score = 93.2 bits (228), Expect = 3e-18
Identities = 64/240 (26%), Positives = 113/240 (46%), Gaps = 20/240 (8%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA-----FSLDTVRRAISDPTF 56
++K + L AV+ FF YP+++ +LAF K L+ + +DP F
Sbjct: 34 SLKRNLTAHGFLIGAVLCFAFFSWYPMVREFFLAFQKTDQGEVSWVGLENLETVFNDPAF 93
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
W+A + T L ++ + + + V+A+ +N GK + +P+ + VA+ L+ +
Sbjct: 94 WQAWRNTALFTVLALVLGFAVPFVVAIVINELRHGKGYLRLLVYLPVMLPPVASVLL-FK 152
Query: 117 MLSDYGFINKLLLNLGIISSPIHFFGYEYRM------MEFLAIVIAEVWRATAIVFVIIL 170
L D G+ G+++ FFG + + L++VIA W +I L
Sbjct: 153 YLYDPGY--------GMLNEVFGFFGLPEQQWLQDPDLSMLSVVIASTWMNMGGAALIYL 204
Query: 171 AGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
A LQ I E EAAE+ GAG ++ + IP + + L+++ + MQVF ++L G
Sbjct: 205 AALQGIPGELYEAAELDGAGLLRKIWHVTIPQTRLILSLMLLMQIIATMQVFVEPFLLTG 264
>emb|CAB95283.1| (AL359779) putative sugar transport integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 93.2 bits (228), Expect = 3e-18
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTK-NGA-----FSLDTVRRAISDPTFWEALKY 62
PYL + P V F YPL+ AL L+FT GA L+ ++ FW +L
Sbjct: 33 PYLFVAPFYVVFAAFGLYPLVFALQLSFTDWKGAGEANFIGLENYTYLLTSEEFWSSLGN 92
Query: 63 TILLALVIVPVQLILALVLA-LAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML-SD 120
+ ++ L+IVP+Q++ L A L N + + + A + P VA +W +D
Sbjct: 93 SAVMWLLIVPLQIVGGLAAAVLLANAKLRLRGMFRVAFIAPFVTPLVAMAQVWIVAFDTD 152
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
YG +N L +G+ + + LA++ +W+ T +I+LAGLQ + +
Sbjct: 153 YGLVNHLFNFVGL--PDVDWLQSTVWAKPTLALLF--LWKTTGFAIIILLAGLQAVPGDV 208
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA-GRDIPVLAGE 239
EAA + GA + + +P+++ SI ++++TL Q+F +++ G
Sbjct: 209 YEAAALDGASRKRQFWSLTLPLVRRSIAFLVVVQTLAVFQMFAEPFVVTQGGPYGSTTTG 268
Query: 240 GFYQLTEI--KDYGVASIYALTIALLSIFLGALYVKFLKA 277
G Y I D G + + + LL L L V+ L++
Sbjct: 269 GLYLYNHILASDLGTGAANSFLLVLLVFALSLLSVRLLRS 308
>pir||G72203 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4982438|gb|AAD36916.1|AE001822_9
(AE001822) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 290
Score = 92.4 bits (226), Expect = 5e-18
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFTK------NGAFSLDTVRRAISDPTFWEALKYTIL 65
L++ ++Y F GYP + L LAF++ L R D FW T+
Sbjct: 14 LVSIYLLYTAIFWGYPFVWMLILAFSRWKFVGSPKFVGLQNFFRIFEDKIFWRVFLNTMN 73
Query: 66 LALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFIN 125
+P+ I +++ A+A+NR K + ++ S VA +++ + S+ G IN
Sbjct: 74 FLSYFIPMVFIASILFAIALNRMKYFKTFVTLSFLVAYVSSGVAYSIMFQRIFSETGPIN 133
Query: 126 KLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAE 185
+ L N I+ P + + L I I W+ +I+ +GLQ I + EAAE
Sbjct: 134 RFLYNAFGITIP----WFTDPQLAMLTIAIMVTWKFVGYYGLILYSGLQAIPKSIFEAAE 189
Query: 186 VFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLT 245
+ GA W + +I +P+L P+I + LI+ + +F +++ G +
Sbjct: 190 LDGATSWVKFWKITLPLLNPAIVTVLILAVNLSFGIFTEPYMITGGGPMNRTLTFMLYMY 249
Query: 246 EIKDYGVASIYALTIALLSIFLGALYVKFLK 276
+ YA TIA+++ + V F++
Sbjct: 250 NTAFQRINPSYATTIAIMTALINFSIVIFIR 280
>pir||T46603 permease cebF [imported] - Streptomyces reticuli
>gi|5327252|emb|CAB46343.1| (AJ009797) CEBF protein
[Streptomyces reticuli]
Length = 306
Score = 92.4 bits (226), Expect = 5e-18
Identities = 73/274 (26%), Positives = 125/274 (44%), Gaps = 16/274 (5%)
Query: 9 PYLLLTPA--VVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILL 66
P+ LL A +V LL+ Y L A LD +S FW ALK T+ +
Sbjct: 25 PFFLLFGAFSLVPLLYTAWYSLHNVQLSALDHKTWAGLDNYENLLSSDFFWNALKNTLTI 84
Query: 67 ALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYGFIN 125
++ QL+ AL LA +N +G ++ P S AA L++ + S D G +N
Sbjct: 85 GIISTVPQLLAALALAHLLNYKLRGSTAWRVVMLTPYATSVAAATLVFTLLYSWDGGMVN 144
Query: 126 KLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAE 185
+L G+ P+++ ++ ++ ++ +WR T +I LA +Q I + E+A
Sbjct: 145 WILDFFGV--DPVNWRESDWGSQFAVSSIV--IWRWTGYNALIYLAAMQAIPADLYESAA 200
Query: 186 VFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLT 245
+ GA W + R + +P L+P+I +++ T+ A Q+FG + G E YQ
Sbjct: 201 LDGANRWQQFRHVTVPQLRPTILFTVVVSTIGATQLFGEPLLFGGVSGSKGGSEHQYQTL 260
Query: 246 EIKDY---------GVASIYALTIALLSIFLGAL 270
+ Y G AS A ++ L+ + + A+
Sbjct: 261 GLYMYDQGWIIGNLGKASAIAWSMFLILLIVAAV 294
>gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Thermobifida fusca]
Length = 302
Score = 92.4 bits (226), Expect = 5e-18
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTK------NGAFS-LDTVRRAISDPTFWEALK 61
PYL + P + F +PL+ ++++ N F+ R + D FW +L
Sbjct: 20 PYLFIAPFFILFAIFGLFPLLYTVWVSLHDWTLLGGNQGFNWFAHYTRLVQDAKFWNSLY 79
Query: 62 YTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML-SD 120
T + +V V QL+LA+ LA ++R + + L++P S A +++ + +
Sbjct: 80 NTFGIFVVAVVPQLLLAMYLADTLSRRIRAVNFFRMGLLLPYLTSIAAVAIVFSQLFGTQ 139
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
+G IN +L GI PI++ R ++AI + WR T +I LA + I RE
Sbjct: 140 FGLINYVLGFFGI--DPINW--QAGRFSSWVAIAVMIDWRWTGYNALIYLAAMSAIPREI 195
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAG-- 238
EAA + GA + +I IPML+P+I +I+ T+ MQ+F PV+ G
Sbjct: 196 YEAAAIDGASRMRQFWQITIPMLRPTIIFTVIVSTIGQMQLF---------TEPVIFGDV 246
Query: 239 ----EGFYQLT---------EIKDYGVASIYALTIALLSIFLGAL 270
+G +Q T +YG S A T+ ++ + L AL
Sbjct: 247 AGGTQGQFQTTMMLIFEEAFRFNNYGYGSAIAWTLFMIIVVLSAL 291
>sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURN
>gi|7442704|pir||E70018 sugar permease homolog yurN -
Bacillus subtilis >gi|2635756|emb|CAB15249.1| (Z99120)
similar to sugar permease [Bacillus subtilis]
Length = 292
Score = 92.1 bits (225), Expect = 7e-18
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 19/288 (6%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTF 56
++K IPYL L PA+V+LLF + P+ + ++L+ + +FS L DP F
Sbjct: 4 QNKIIPYLFLVPALVFLLF-VYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDPVF 62
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALV--IPLTISDVAAGLIW 114
++AL +L A++ + Q+ L+LA + K + V +P+ IS L++
Sbjct: 63 YQALTNNVLYAVISIVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLF 122
Query: 115 -YTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGL 173
+ + G +N+LL +G+ + G + M L+++ W++ + ++ + +
Sbjct: 123 DFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAM--LSVIFVSQWQSVGYIAMLYIVSI 180
Query: 174 QMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDI 233
Q I E EAA + GAG + I +P K A+++ A VF +IL G
Sbjct: 181 QKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGG- 239
Query: 234 PVLAGE----GFYQLTEIKD-YGVASIYALTIALLSIFLGALYVKFLK 276
P A E Y+ KD G AS A + ++++ L + +KF K
Sbjct: 240 PGKASEVLSTFLYKSAFTKDMMGYASAIATVVLIITLALSLMQMKFFK 287
>dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Bacillus halodurans]
Length = 305
Score = 91.7 bits (224), Expect = 9e-18
Identities = 78/277 (28%), Positives = 133/277 (47%), Gaps = 23/277 (8%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALKYT 63
Y ++P + F +P+I + YL+F + + L + +DPTF+ A+K T
Sbjct: 21 YAFISPFFILFAVFGLFPMIFSFYLSFFRWDGLNPMSYVGLANFQLIFNDPTFFSAIKNT 80
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALV-IPLTISDVAAGLIWYTMLSD-- 120
++ ++ Q+I+ ++LA A+N A T LV +P S VA +I+ + ++
Sbjct: 81 FIIGILGTLPQIIVGILLAFALNSALIRFQHTFRTLVFLPYITSIVAVAIIFGLVFNNQP 140
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
+G N +L I P+ + EY ++ +AI WR +I LAG+Q I +E
Sbjct: 141 FGLANYVLSLFNI--DPVRW-SQEYWPVK-IAIATMVFWRWVGYNTIIFLAGMQSIPKEL 196
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG 240
EAA++ GA ++R I +PMLKP I + T+ ++Q+F I GR L EG
Sbjct: 197 YEAAKIDGATIGQQIRLITVPMLKPFILFVVFTATIGSLQLFTEPLIFLGRG---LREEG 253
Query: 241 FYQLT-------EIKDYGVASIYALTIALLSIFLGAL 270
+ + +G AS A+ + + I L A+
Sbjct: 254 ITMVAYLWRDAFVLNAFGTASAAAIVLFFIIITLTAI 290
>pir||G72379 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980937|gb|AAD35516.1|AE001721_15
(AE001721) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 286
Score = 90.9 bits (222), Expect = 2e-17
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALKYT 63
++ + P +V+L+ F+ P+I + F K S L+ + + D FW ++ +
Sbjct: 10 FIFVLPGLVFLVLFVAVPVISVFIMGFFKWNLLSPPRFVGLENFKMLLKDKWFWNSVWVS 69
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-DYG 122
I L L+ VP+Q ++L LAL + + P + VA +W +LS D G
Sbjct: 70 IKLLLLAVPMQFFVSLGLALCLYEETTASKILRAFFYWPYMMPAVAGTTMWKWLLSYDIG 129
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+N +L LG+ P+ + + + +I + W T ++ V+ + GLQ + ++Y+E
Sbjct: 130 LLNHILRTLGL--PPVPWLIKPFPAL--FSIALLRTWGMTGLLMVMFITGLQNVPQDYIE 185
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
AA + GA W R +V P + + L+ ++ F V++L
Sbjct: 186 AAMIDGANRWQRFWYVVFPAMSNTNLLVLMTAIAHTLRSFAGVYVL 231
>emb|CAB70940.1| (AL137778) putative transport system inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 328
Score = 90.9 bits (222), Expect = 2e-17
Identities = 63/228 (27%), Positives = 115/228 (49%), Gaps = 12/228 (5%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALKYT 63
YL ++P + L P++ +LY AFT F LD DP + ++++ T
Sbjct: 40 YLFMSPWIAGFLLLTAGPMVASLYFAFTDYNLFDAPTWIGLDNFSEMFGDPRWRQSVRIT 99
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTI-SDVAAGLIWYTMLSDYG 122
+ +V PV+LI AL +AL + + +G+ A P I + V+ ++W + SD
Sbjct: 100 LWYVVVGTPVKLIAALGVALLLAQKRRGQAFYRAAFYAPSLIGASVSVAIVWKAIFSDDA 159
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+++ GI + + + ++ + ++V VW+ A + VI LAGL+ + RE E
Sbjct: 160 VVDRTQQLFGIDAGG---WTGDPELIIY-SLVALTVWQFGAPM-VIFLAGLKQVPRELYE 214
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
AA+V GAG + I +PM+ P + +++ T+ + Q+F +I+ G
Sbjct: 215 AADVDGAGKLRQFWNITLPMISPVLFFNVLLETIHSFQIFSSAYIVGG 262
>emb|CAC11292.1| (AL445063) trehalose/maltose transporter, inner membrane protein
MalF related protein [Thermoplasma acidophilum]
Length = 280
Score = 90.1 bits (220), Expect = 3e-17
Identities = 63/231 (27%), Positives = 123/231 (52%), Gaps = 9/231 (3%)
Query: 1 MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAF-TKNGAFSLDTVRRAISDPTFWEA 59
M + ++ Y+L+ PA++Y+L+ P I+A+Y +F T G SL S TF +
Sbjct: 1 MKWRDEWTAYILMLPAIIYVLYLAFIPAIEAVYGSFHTATGKTSLYNYNFVFS--TFGTS 58
Query: 60 -LKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML 118
+ T ++ + +Q +A ++A +++ F+G+ + +IP ++ + G+I++ +
Sbjct: 59 PIINTFIVTASALLLQFTVAFLVASLLSKPFRGRGVFSAIFLIPFGVATIVTGVIFHDIF 118
Query: 119 SDYG-FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMIS 177
S +G + N +LL+L + PI + G + L +++A+ W+ T IV +++L+G+ I
Sbjct: 119 STFGGYANTVLLDLHL--KPIDWTGSYGTSL--LVLILADSWKNTPIVTLVLLSGMVTIP 174
Query: 178 REYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
+ A V GAG +R I IP + I AL+IR + +F + +L
Sbjct: 175 SDLYAQAMVDGAGPISRFFHITIPNMIGFIAIALMIRGISEFNIFAMALLL 225
>emb|CAB59589.1| (AL132662) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 302
Score = 90.1 bits (220), Expect = 3e-17
Identities = 58/235 (24%), Positives = 113/235 (47%), Gaps = 19/235 (8%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTK----------NGAFSLDTVRRAISDPTFWE 58
PYLL+ PAV+ +L+ + YPL +A+ ++F L R + DP FWE
Sbjct: 13 PYLLIAPAVLGMLYLLLYPLARAVLISFQDFRLRQLILGDADFVGLRNYRTLLGDPEFWE 72
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKG-KDLTIYALVIPLTISDVAAGLIWYTM 117
++ T + V V ++L+ ++AL R + + + + +LV+ + VAA ++ +
Sbjct: 73 VVRRTFVFMAVGVVAIMVLSTLVALMTERLGRAARTVVLSSLVLVWAVPVVAATTVFQWL 132
Query: 118 L-SDYGFINKLLLNLGIISSPIHFFGYEYRM---MEFLAIVIAEVWRATAIVFVIILAGL 173
S++G +N+ L LG S + GY + F +V+ VW++ + + + L
Sbjct: 133 FHSEFGIVNETLTGLGFES----YEGYPWFAHGGAAFGIVVVLIVWQSVPFAAITLYSAL 188
Query: 174 QMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
+ E E+A + GAG R + P+++P L + ++ + F +W++
Sbjct: 189 VTVPAELYESARMDGAGAARVFRSVTFPLIRPIFMLVLSLEVIWTFKAFVQIWVM 243
>emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyces coelicolor
A3(2)]
Length = 334
Score = 90.1 bits (220), Expect = 3e-17
Identities = 72/293 (24%), Positives = 123/293 (41%), Gaps = 31/293 (10%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------------------LDTVRRAI 51
Y ++ P V + + YPL LYL T + + LD +
Sbjct: 37 YAMIAPVAVVIGVLVLYPLGYGLYLTLTDANSLNSARTIGVNEIEATYKFVGLDNYADIL 96
Query: 52 SDPT----FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISD 107
PT FW +TI+ V V + + L LAL +N+ +G+ LV+P +
Sbjct: 97 WGPTAYDRFWSHFIWTIVWTAVCVGLHFFIGLGLALLLNQKLRGRTFYRLILVLPWAVPT 156
Query: 108 VAAGLIWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFV 167
W ML+D G IN L L + P + + F AI++ W + V
Sbjct: 157 FVTVFGWRFMLADQGIINSALDWLHL---PTPAWLEDTFWQRFSAIMV-NTWCGVPFMMV 212
Query: 168 IILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
+L GLQ I EA+E+ GA W R R + +P L+ + +++ ++ F V+++
Sbjct: 213 SLLGGLQSIDNSLYEASEMDGANAWQRFRYVTLPGLRSVSSTVVLLGIIWTFNQFAVIFL 272
Query: 228 LAGRDIP--VLAGEGFYQL---TEIKDYGVASIYALTIALLSIFLGALYVKFL 275
L G P + YQL + +D+ ++ Y + + + I + Y ++L
Sbjct: 273 LFGNTAPDAQILVTWAYQLGFGQQPRDFAQSAAYGILLLAILIVFTSFYRRWL 325
>pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001331|dbj|BAA10818.1| (D64006) membrane bound
sugar transport protein [Synechocystis sp.]
Length = 279
Score = 88.5 bits (216), Expect = 8e-17
Identities = 61/280 (21%), Positives = 140/280 (49%), Gaps = 17/280 (6%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRR---AISDPTFWEALKYTILLA 67
+ +TPA+++L ++ P ++ +YL+F + + ++ A +D T A + +L
Sbjct: 1 MYVTPALLFLSAYLILPTLETVYLSFFDGRSRNFVGLKNYVFAFTDHTMLVAFRNNLLWL 60
Query: 68 LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS-------D 120
+++ + + L L++A+ V++ + + + + +P+ IS V A +IW + +
Sbjct: 61 VLVTGISVSLGLIIAVLVDKV-RYEAIAKSIIFLPMAISFVGASVIWKFVYAYRPAGAEQ 119
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREY 180
G +N ++ +LG +P+ + R + A++ +W T VI+ A ++ I +
Sbjct: 120 IGLLNAIVTSLGF--APVGWL--VERSVNNFALIAIMIWLYTGFCMVILSAAVKGIPADV 175
Query: 181 LEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG--RDIPVLAG 238
+EAA + GA W RI IPM++ ++ + ++VF +V+++ G + V+A
Sbjct: 176 IEAARIDGANSWQIFWRITIPMIRSTLLVVSTTMVILVLKVFDIVFVMTGGNQGTEVIAS 235
Query: 239 EGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
++ +++G S A+ + LL + + ++ KA+
Sbjct: 236 LMIKEMFNYRNFGRGSTIAVILLLLIVPVMITNIRRFKAQ 275
>gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner membrane protein; SmoF
[Rhodobacter sphaeroides]
Length = 290
Score = 88.5 bits (216), Expect = 8e-17
Identities = 61/232 (26%), Positives = 112/232 (47%), Gaps = 14/232 (6%)
Query: 5 SKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF--------SLDTVRRAISDPTF 56
SK L+++PAV+ L ++ PL LY +F + D ++DP F
Sbjct: 6 SKTAARLMISPAVILLFLWMIVPLSMTLYFSFLRYNLLMPGMESFTGWDNYYYFLTDPAF 65
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
AL TILL + ++ + ++ ++LAL +++ F G+ + ++ P + + L+W
Sbjct: 66 SAALTNTILLVVGVLLITVVGGVLLALLLDQPFWGQGIVRVLVIAPFFVMPTVSALVWKN 125
Query: 117 MLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEV-WRATAIVFVIILAGLQM 175
M F+N + I+ + +++ LA +I V W+ +I+L LQ
Sbjct: 126 M-----FMNPVNGMFAHIARGLGLPPFDFLSQAPLASIIGIVAWQWLPFATLILLTALQS 180
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
+ RE +EAAE+ GA R I +P L +I ++I+T+F + VF + +
Sbjct: 181 LDREQMEAAEMDGASALDRFIHITVPHLTRAITVVVLIQTIFLLGVFAEILV 232
>pir||F70693 probable ugpA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648885|emb|CAB03651.1| (Z81331) ugpA [Mycobacterium
tuberculosis]
Length = 303
Score = 88.2 bits (215), Expect = 1e-16
Identities = 65/226 (28%), Positives = 107/226 (46%), Gaps = 12/226 (5%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFW-------EALKYT 63
+L+ P V LL F+ PL + L+F +S+ T W + + T
Sbjct: 24 VLVGPNVALLLLFVYRPLADNIRLSFFDWNVSDPSARFVGLSNYTEWFTRSDTRQIVFNT 83
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLI-WYTMLSDYG 122
+ V ++L L LA+ ++R +G++L + P IS A GL + +G
Sbjct: 84 AVFTGAAVVGSMVLGLALAMLLDRPLRGRNLVRSTVFAPFVISGAAVGLAAQFVFDPHFG 143
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
I LL +G+ + F + R F+ + I VW+ FVI LA LQ + R+ LE
Sbjct: 144 LIQDLLRRIGV---GVPDFYQDARWALFM-VTITYVWKNLGYTFVIYLAALQGVRRDLLE 199
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
AAE+ GA W RR+++P L+P+ I + ++QVF V+ ++
Sbjct: 200 AAEIDGASRWAVFRRVLLPQLRPTTFFLSITVLINSLQVFDVINVM 245
>emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycobacterium leprae]
Length = 319
Score = 88.2 bits (215), Expect = 1e-16
Identities = 73/272 (26%), Positives = 132/272 (47%), Gaps = 19/272 (6%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWEALKYT 63
+ + P + + F+ +PL +LY++F K F+ + SDP F AL +
Sbjct: 33 MFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPVFVGLANFQNLFTSDPLFLIALCNS 92
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDY-G 122
++ + V ++++LV+A +N+ KG + + +PL IS V ++W + + + G
Sbjct: 93 VVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMAVVWQFIFNTHNG 152
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+N +L +GI PI + M L IV VWR+ V++LA +Q + + E
Sbjct: 153 LLNIMLGWIGI--GPIPWLVNPGWAMASLCIV--SVWRSVPFATVVLLAAMQEVPKTVYE 208
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRD------IPVL 236
AA++ GAG + I +P ++ +I ++I + A Q F +V++L G + VL
Sbjct: 209 AAKIDGAGEIRQFISITVPFIRGAISFVVVISFIHAFQTFDLVYVLNGPNGGPELATYVL 268
Query: 237 AGEGFYQLTEIKDYGVASIYAL-TIALLSIFL 267
F ++G AS AL T A+L + +
Sbjct: 269 GIMLFQHAFSFLEFGYASALALVTFAILLVLI 300
>emb|CAC01655.1| (AL391072) putative sugar-transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 310
Score = 88.2 bits (215), Expect = 1e-16
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWEALKYT 63
L+ PAV L + PL+ + YL+ T ++ LD R + DP +A T
Sbjct: 30 LMTAPAVALFLVMMVVPLVLSGYLSLTDWDGYTAHPAMVGLDHYRALLDDPEVRQAAWIT 89
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+LLA++ + L LALA++ + + P IS + G +W +LS G
Sbjct: 90 VLLAVIGTLAVNAVGLALALAISTPGRTNTVLRTVFFYPYVISALIIGFLWSALLSTNGA 149
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N +L G P + + + +V VW V+ +AGL + LEA
Sbjct: 150 VNSVLRAAGHAGLPF-LSQPGWALASLIGVV---VWSGFGFTLVLYIAGLHTVPASLLEA 205
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
A + GAG W LR + +PM+ P + +++ + ++ + +V L G
Sbjct: 206 ARIDGAGRWRILRSVTLPMIAPVVTVNVVLTLVTLLRSYDLVLSLTG 252
>pir||C81147 sulfate ABC transporter, permease protein NMB0880 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226118|gb|AAF41291.1| (AE002440) sulfate ABC
transporter, permease protein [Neisseria meningitidis
MC58]
Length = 286
Score = 87.4 bits (213), Expect = 2e-16
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 28/270 (10%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVI 70
LL+ A+ +LL + PL+ Y A K G D ++++DP W A+K T++ AL++
Sbjct: 19 LLIAAALGFLLLMLVVPLVAVFYEAL-KGG---WDLYLKSLNDPEAWSAIKLTLITALIV 74
Query: 71 VPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLLL 129
VPV +L + +A + R F+GK L L +P ++S V AGL++ + + + L
Sbjct: 75 VPVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLE 134
Query: 130 NLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGA 189
GI + IV+A ++ V I+ +Q +AA + GA
Sbjct: 135 AQGI-----------QIIFAIPGIVLATLFVTFPFVAREIIPLMQAQGDSEEQAALILGA 183
Query: 190 GYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG------RDIPVLAGEGFYQ 243
W R+ +P +K ++ +I+ AM FG V +++G +P+L E FY
Sbjct: 184 SGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLV-EIFY- 241
Query: 244 LTEIKDYGVASIYALTIALLSIFLGALYVK 273
+Y +AL+ L + L L V+
Sbjct: 242 ----NEYNFTGAFALSGVLALLALATLAVQ 267
>pir||E72357 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981115|gb|AAD35681.1|AE001734_8
(AE001734) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 420
Score = 87.0 bits (212), Expect = 2e-16
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 5/174 (2%)
Query: 56 FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWY 115
F +AL T+ ++ VP Q+ ++L++AL +N K + A IP S VA L+W
Sbjct: 189 FLKALTNTLYYVILSVPSQIFISLMIALLLNSNVKFRVFFRTAYFIPFVTSVVAISLVWK 248
Query: 116 TMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQ 174
+ +D +G +N +L I PI + E + +AIV VW+ VI LAGLQ
Sbjct: 249 WIFNDEFGLLNYILSLFNI--EPISWLKDERWTIPTIAIV--SVWKTVGYDAVIFLAGLQ 304
Query: 175 MISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
I R Y EAAEV GA + I P+L P+ LI+ + A +VF V++L
Sbjct: 305 NIDRSYYEAAEVDGASSLQKFFYITWPLLSPTTFFLLIVSLIGAFKVFAEVYVL 358
>pir||G81875 sulfate ABC transporter, inner membrane protein NMA1098
[similarity] - Neisseria meningitidis (group A strain
Z2491) >gi|7379793|emb|CAB84361.1| (AL162755) putative
sulphate permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 286
Score = 87.0 bits (212), Expect = 2e-16
Identities = 72/270 (26%), Positives = 125/270 (45%), Gaps = 28/270 (10%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVI 70
LL+ A+ +LL + PL+ Y A K G D ++++DP W A+K T++ AL++
Sbjct: 19 LLIAAALGFLLLMLVVPLVAVFYEAL-KGG---WDLYLKSLNDPEAWSAIKLTLITALIV 74
Query: 71 VPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLLL 129
VPV +L + +A + R F+GK L L +P ++S V AGL++ + + + L
Sbjct: 75 VPVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLE 134
Query: 130 NLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGA 189
GI + I++A ++ V I+ +Q +AA + GA
Sbjct: 135 AQGI-----------QIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALILGA 183
Query: 190 GYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG------RDIPVLAGEGFYQ 243
W R+ +P +K ++ +I+ AM FG V +++G +P+L E FY
Sbjct: 184 SGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLV-EIFY- 241
Query: 244 LTEIKDYGVASIYALTIALLSIFLGALYVK 273
+Y +AL+ L + L L V+
Sbjct: 242 ----NEYNFTGAFALSGVLALLALATLAVQ 267
>emb|CAC10105.1| (AL442165) putative cellobiose transport permease [Streptomyces
coelicolor]
Length = 337
Score = 86.6 bits (211), Expect = 3e-16
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAF--------TKNGAFSLDTVRRAISDPTFW 57
++ PY ++P + L F +PLI + + T LD R D FW
Sbjct: 47 RWSPYAFVSPFFLLFLAFGLFPLIYTGWASLHTVELTAPTDMQWTGLDNYTRIFDDEFFW 106
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
A K T+ + ++ QL++A+ LA +N + ++ P S AA L++ +
Sbjct: 107 NAAKNTLWIGVISTVPQLLMAMGLAHILNYKLRASTFYRVVMLAPYATSIAAASLVFVLL 166
Query: 118 LS-DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMI 176
DYG IN +L +G+ + + A+ +WR T +I LA +Q I
Sbjct: 167 FGRDYGMINWVLDLVGLDKIDWQNGSWSSKF----AVSTIVIWRWTGYNALIYLAAMQAI 222
Query: 177 SREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG 223
++ E+A + GA W + + +P L+P+I +++ T+ A QVFG
Sbjct: 223 PQDLYESAALDGASRWRQFIHVTLPSLRPTILFTVVVSTIGASQVFG 269
>emb|CAA68973.1| (Y07706) putative maltose permease [Streptomyces coelicolor]
Length = 334
Score = 85.0 bits (207), Expect = 9e-16
Identities = 70/293 (23%), Positives = 122/293 (40%), Gaps = 31/293 (10%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------------------LDTVRRAI 51
Y ++ P V + + YPL LYL T + + LD +
Sbjct: 37 YAMIAPVAVVIGDLVLYPLGYGLYLTLTDANSLNSARTIGVNEIEATYKFVGLDNYADIL 96
Query: 52 SDPT----FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISD 107
PT FW +TI+ V V + + L LAL +N+ +G+ LV+P +
Sbjct: 97 WGPTAYDRFWSHFIWTIVWTAVCVGLHFFIGLGLALLLNQKLRGRTFYRLILVLPWAVPT 156
Query: 108 VAAGLIWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFV 167
W ML+D G IN L L + P + + F AI++ W + V
Sbjct: 157 FVTVFGWRFMLADQGIINSALDWLHL---PTPAWLEDTFWQRFSAIMV-NTWCGVPFMMV 212
Query: 168 IILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
+L G +I EA+E+ GA W R R + +P L+ + +++ ++ F V+++
Sbjct: 213 SLLGGPPVIDNSLYEASEMDGANAWQRFRYVTLPGLRSVSSTVVLLGIIWTFNQFAVIFL 272
Query: 228 LAGRDIP--VLAGEGFYQL---TEIKDYGVASIYALTIALLSIFLGALYVKFL 275
L G P + YQL + +D+ ++ Y + + + I + Y ++L
Sbjct: 273 LFGNTAPDAQILVTWAYQLGFGQQPRDFAQSAAYGILLLAILIVFTSFYRRWL 325
>pir||G83248 probable permease of ABC sugar transporter PA3189 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9949307|gb|AAG06577.1|AE004742_13 (AE004742)
probable permease of ABC sugar transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 85.0 bits (207), Expect = 9e-16
Identities = 76/282 (26%), Positives = 132/282 (45%), Gaps = 24/282 (8%)
Query: 7 YIPYLLLTPAVVYLLF----FIGYPLIQALYLAFTKNGAF-------SLDTVRRAISDPT 55
++P L+L P+VV +LF +IG+ L+ L+FT N F L +R +
Sbjct: 27 WLPKLVLAPSVVVVLFCMYGYIGWTLL----LSFT-NSRFMPSYKWAGLSQYQRLWDNDR 81
Query: 56 FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWY 115
+W A K +L + + L+L + LA+ +++ + + + P+ +S + G W
Sbjct: 82 WWVASKNLLLFGGSFIAICLVLGVFLAVLLDQRIRREGFIRTLYLYPMALSMIVTGTAWK 141
Query: 116 TMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+L+ ++KLL + G + R++ +VIA VW+A+ V + LAGL+
Sbjct: 142 WLLNPGLGLDKLLRDWGWEGFRFDWLVDPERVV--YCLVIAAVWQASGFVMALFLAGLRG 199
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA------ 229
+ + AA+V GA T RIV+P L+P SAL+I A++ F +V +
Sbjct: 200 VDPAIVRAAQVDGASLPTIYLRIVLPSLRPVFFSALMILAHIAIKSFDLVAAMTAGGPGY 259
Query: 230 GRDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALY 271
D+P + G AS + A+L+I + LY
Sbjct: 260 SSDLPAMFMYAHTFTRGQMGLGAASAMLMLGAVLAIVVPYLY 301
>emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/maltose (malF)
related protein [Thermoplasma acidophilum]
Length = 304
Score = 84.7 bits (206), Expect = 1e-15
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 20/289 (6%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA--------FSLDTVRRAISD 53
N+ K I Y+L P + L+F YP+ +Y +FT L ++
Sbjct: 16 NLDWKSIIYVL--PVIAVLIFLDFYPIGVGIYFSFTNLNVVHFYDYSFIGLANYVSIVTS 73
Query: 54 PTFWEALKYTILLALVIVPVQLILALVLALAVN-RAFKGKDLTIYALVIPLTISDVAAGL 112
F + + +TI+ ++ + + + LAL +N + GK ++ P L
Sbjct: 74 SAFLQIILHTIIWSVGSTALMVPMGFALALVINQKGLIGKRFYRTLILFPWAYPAFITLL 133
Query: 113 IWYTMLS-DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILA 171
IW MLS +G IN++L +GI F + L++++ +W + + A
Sbjct: 134 IWKNMLSYHFGIINEVLNAIGIKG----LFWLGSPSLAMLSLILVNLWLSFPYYTYVFTA 189
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGR 231
+Q I E +AAE+ G G LRRI IPML I +F F V++L G
Sbjct: 190 SIQSIPSELYDAAEMDGYGTLRTLRRITIPMLSRQFAFITIFGFIFTWNNFYPVFLLTGG 249
Query: 232 ----DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLK 276
+L +Y+ YGV YA+ L+ + L L K+ K
Sbjct: 250 GPLISTQILITYSYYEAFTYLAYGVGIAYAIISILILLVLVVLANKYTK 298
>emb|CAB55715.1| (AL117387) putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 84.3 bits (205), Expect = 2e-15
Identities = 64/268 (23%), Positives = 114/268 (41%), Gaps = 16/268 (5%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFTKNGAF--------SLDTVRRAISDPTFWEALKYT 63
++ PAV+ + + P+I A+Y +FT+ F LD R + T
Sbjct: 21 MVVPAVLVYVALLVVPVIYAIYYSFTEYNGFPHRVPEFIGLDNYRTMFGSDDITGTMVVT 80
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
++A+V + AL LAL + R + + P +S + G +W +L G
Sbjct: 81 AVVAVVGAVAVNLAALGLALLLQRTNRFNTFGRVVMFYPHVLSALVVGFLWQAILGPQGV 140
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N +L G S P ++ + + ++ VW + ++ LAGLQ + + LEA
Sbjct: 141 VNTMLEKAGTDSLPF-LSDPDWALWSMILVI---VWSLFGVQLILYLAGLQAVPADLLEA 196
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQ 243
A + GA W R + P L ++ A+I + ++ + VV L G Y
Sbjct: 197 ARIDGASRWQTFRAVTWPSLASTVTVAVITSGISLLKTYDVVVSLTGGGPAGSTKTLAYS 256
Query: 244 LTEI----KDYGVASIYALTIALLSIFL 267
+ + +D GVAS A+ + + + L
Sbjct: 257 ILAVSFPQRDIGVASAQAVLLIVAAAVL 284
>dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [Bacillus halodurans]
Length = 287
Score = 84.3 bits (205), Expect = 2e-15
Identities = 73/274 (26%), Positives = 127/274 (45%), Gaps = 34/274 (12%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYT 63
+S+++ L+ A+ +L F+ PLI Y AF + L +IS+P A+K T
Sbjct: 18 ESRFVKVTLIGIALSFLFLFLVLPLIAIFYRAFEQG----LAVYFASISEPDALSAIKLT 73
Query: 64 ILLALVIVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
L+ L+ VP+ + + A A+ + F+GK+L + +P ++S V AGLI+ + S +G
Sbjct: 74 FLVVLITVPLNTLFGIAAAWAIGKFQFRGKNLLTTFIDLPFSVSPVIAGLIFVLLFSSHG 133
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
LL+ GI + IV+A ++ V ++ +Q E
Sbjct: 134 VFGPWLLDRGI-----------QIIFSIPGIVLATMFVTVPFVARELIPVMQAQGTAQEE 182
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGR----------D 232
A+ GA W L + +P +K ++ +I+ A+ FG V +++G
Sbjct: 183 ASLTLGASGWKTLWHVTLPNVKWALLYGVILCNARAIGEFGAVSVVSGHIRGLTNTMPLH 242
Query: 233 IPVLAGEGFYQLTEIKDYGVASIYALTIALLSIF 266
I +L E YQ T + VAS+ ++LL+IF
Sbjct: 243 IEILYNE--YQFTAA--FAVASL----MSLLAIF 268
>emb|CAC16436.1| (AL450165) putative sugar transport permease [Streptomyces
coelicolor]
Length = 331
Score = 84.3 bits (205), Expect = 2e-15
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAI--------SDPTFW 57
K PY + P + F YPLI +++ +LD + D FW
Sbjct: 40 KGAPYAFVAPFFIVFAAFSFYPLIYTSWISLHDVELATLDVMEWVAFDNYVELWGDSRFW 99
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
A++ TI + ++ QL++AL +A +N + A ++P S AA L+ +TM
Sbjct: 100 NAVQNTITIGVISTVPQLMMALGMAHLLNYRMRASLFFRVASLVPYATSVAAAALV-FTM 158
Query: 118 L--SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+ D+G IN L ++GI P+ + ++ ++ ++ +WR T ++ LA +Q
Sbjct: 159 IFERDFGMINWALGSVGI--DPVDWEADKWPAQVAISTIV--IWRWTGYNALLYLAAMQA 214
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG 223
I + EAA + GA W + + IP ++ +I +++ T+ A Q+FG
Sbjct: 215 IPADRYEAASLDGASRWKQFIHVTIPGIRSTIVFTIVLSTIGATQLFG 262
>sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|7442785|pir||S76742 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
>gi|1653743|dbj|BAA18654.1| (D90916) sulfate transport
system permease protein [Synechocystis sp.]
Length = 276
Score = 83.9 bits (204), Expect = 2e-15
Identities = 70/282 (24%), Positives = 125/282 (43%), Gaps = 20/282 (7%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYT 63
K+ + YLL+ A+ YL+ + P I Y AF K ++ +A+ D F AL+ T
Sbjct: 8 KTFKVKYLLIALALFYLILVLLLPAIAVFYEAFHKG----VEPFIQAMGDRNFQSALQLT 63
Query: 64 ILLALVIVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
+++AL+ VP+ + L A + R F G+ L + L +P +IS V AGL+ + G
Sbjct: 64 VVMALISVPLNTVFGLCAAWVLARNQFPGRALFLSVLDLPFSISPVVAGLMIVLLYGKNG 123
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+I + I + + IA ++ V ++ L+ + E E
Sbjct: 124 WIGSWFASWDI-----------QIIFSVPGMAIATIFVTLPFVAREVIPVLEELGPEQEE 172
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFY 242
AA GA W R+ +P ++ + +++ AM FG V +++G + + +
Sbjct: 173 AARTLGAKDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVAVVSGSILGKTSTLPIF 232
Query: 243 QLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
E K+Y + + + L + + L +K E LE RT
Sbjct: 233 VEQEYKNYQTEAAFGAAVVLALLAVVTLVLK----EILEQRT 270
>dbj|BAA14894.1| (D90770) Sn-glycerol-3-phosphate transport system permease protein
UgpA. [Escherichia coli]
Length = 228
Score = 83.9 bits (204), Expect = 2e-15
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 53 DPTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGL 112
DP FW +L T+ ++V +L L +A+ NR F+ + +++ ++
Sbjct: 1 DPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVF 60
Query: 113 IWYTMLSD-YGFINKLLLNLGII--SSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVII 169
W M ++ YG +N L ++L + +P+ F + F+ +V+ +WR F+
Sbjct: 61 AWKYMFNNGYGIVNYLGVDLLHLYEQAPLWF---DNPGSSFVLVVLFAIWRYFPYAFISF 117
Query: 170 LAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA 229
LA LQ I + EAAE+ GA W R R + +P + P + + + +RT++ +F V++L
Sbjct: 118 LAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT 177
Query: 230 GRDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGAL 270
+ + +L + D G A+ A+++ L I +
Sbjct: 178 TK-VDILGVYLYKTAFAFNDLGKAA--AISVVLFIIIFAVI 215
>pir||H82184 glycerol-3-phosphate ABC transporter, permease protein VC1550
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656057|gb|AAF94704.1| (AE004233)
glycerol-3-phosphate ABC transporter, permease protein
[Vibrio cholerae]
Length = 293
Score = 83.9 bits (204), Expect = 2e-15
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSL-------DTVRRAISDPTFWEAL 60
+PYLLL P +V + F YP QA+YL+F + L + + S + ++L
Sbjct: 12 LPYLLLAPQIVIIAVFFIYPAAQAIYLSFMLEDPWGLSSTFVWFENYQVLFSSTDYLDSL 71
Query: 61 KYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD 120
+T+L ++++ + L LAL+LA+ + G+ L ++ AG+I + +
Sbjct: 72 GFTLLFSVIVSFLSLALALLLAVKADNIIHGQGSYRVTLTWVYAVAPAVAGIIGGFLFNP 131
Query: 121 YGFINKLLLNLGIISSPIHFFGYEYRMM-----EFLAIVIAEVWRATAIVFVIILAGLQM 175
+ +G+++ + G+++ +A+++ VW+ ++ F+ LAGLQ
Sbjct: 132 H---------IGVLTDFFQYIGWQFSFQTDPVDATIALILVSVWKQVSVNFLYFLAGLQS 182
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFA-MQVFGVV 225
IS EAA + R I P+L P+ L+I +A FGV+
Sbjct: 183 ISYAVREAALLDCQSDSKRFWSITFPLLAPTGFFLLVINLTYAFFDTFGVI 233
>sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE PROTEIN AGLF
>gi|4210906|gb|AAD12049.1| (AF045609) AglF
[Sinorhizobium meliloti]
Length = 290
Score = 83.5 bits (203), Expect = 3e-15
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 1 MNIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA---FSLDTVRRAISDPTFW 57
M I + P+L L PA++ L ++ YP++Q+++L+ G L I+D F
Sbjct: 1 MRIANSIRPWLFLAPALLALTLYLVYPVVQSVWLSLHGRGGQNFVGLSNYSWMINDGEFR 60
Query: 58 EALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
+++ L LV+ + L++A +R + G ++ + +P+ IS V A +IW
Sbjct: 61 QSIFNNFLWLLVVPALSTFFGLIIAALTDRIWWG-NIAKTLIFMPMAISFVGAAVIW-KF 118
Query: 118 LSDY--------GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVII 169
+ DY G +N +++ LG P + + FL +++ +W T VI+
Sbjct: 119 IYDYRAAGSEQIGLLNAIVVALG--GEPQAWITLPFWNNFFLMVIL--IWIQTGFAMVIL 174
Query: 170 LAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVV 225
A L+ I E +EAA + GA W +I++P + +I T+ ++VF +V
Sbjct: 175 SAALRGIPEETIEAAVIDGANGWQIFFKIMVPQIWGTIAVVWTTITILVLKVFDIV 230
>dbj|BAB05584.1| (AP001513) sugar transport system (permease) (binding protein
dependent transporter) [Bacillus halodurans]
Length = 309
Score = 83.1 bits (202), Expect = 4e-15
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDT-------VRRAISDPTF 56
K + YL + P ++ F P++ ++Y++FT ++ R ++D F
Sbjct: 25 KEYFWGYLFIAPPIIGFAIFALGPMLYSIYVSFTDFDLYNEPVWTGADNYYRLFVTDDLF 84
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIW-Y 115
+ + T AL I P+ + ++L +A+A+N+ KG L A +P S VA L+W +
Sbjct: 85 RKTVFNTFYAALGI-PIGMAVSLGIAVALNQKVKGIALFRTAFFLPAVSSVVAITLLWRW 143
Query: 116 TMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+D+G +N ++LN I P ++ M A++I VW I ++ LA LQ
Sbjct: 144 IFNADFGLLN-IMLNYVGIHGPGWLSDEKWAMP---AMIIQGVWGGLGINMILYLAALQG 199
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVF 222
++ EAA++ G W + I +P + P+ LI T+ A+Q F
Sbjct: 200 VNPALYEAADIDGGNAWQKFIHITVPSISPTTFFILITSTIGALQDF 246
>emb|CAB56684.1| (AL121596) binding-protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 82.7 bits (201), Expect = 5e-15
Identities = 56/216 (25%), Positives = 104/216 (47%), Gaps = 9/216 (4%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLA------FTKNGAFS-LDTVRRAISDPTFWEALKYT 63
+L PA+V+ L F+ PL+ +A + +F+ LD R + DP FW+A++ T
Sbjct: 35 VLAVPALVWYLVFMVGPLLAIFVIAALHWPGMLQPVSFAGLDNARVVLDDPVFWDAVRNT 94
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+ V VPV ++ A +L V + G + Y L IP IS A +++Y LS G
Sbjct: 95 AVQLAVAVPVMIVCAFMLGYYVAQRPPGHRVIRYLLFIPGLISTPAKAMVFYAALSPDGL 154
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N L ++G+ S + + ++ ++W V+ A L + E EA
Sbjct: 155 LNGGLESVGLGSLADAWLASPSTAL--ACLIALDIWAGIGFTAVLFAARLGSVPDELGEA 212
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAM 219
A++ GAG+W + + P+++ + +++ L+ +
Sbjct: 213 AQLDGAGHWRTMWSVHFPVIRDYVGVVTMLQFLWTL 248
>pir||E70703 probable uspA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1524284|emb|CAB02051.1| (Z79702) uspA [Mycobacterium
tuberculosis]
Length = 290
Score = 81.5 bits (198), Expect = 1e-14
Identities = 72/281 (25%), Positives = 125/281 (43%), Gaps = 25/281 (8%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALK 61
+ Y LL P++V ++ F+ P++ ++L+ + L R ++D F ++L
Sbjct: 11 LAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFADSLV 70
Query: 62 YTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDY 121
T + ++VP Q +L L+ A + R G L V+P + +A ++W +++
Sbjct: 71 VTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIVAPT 130
Query: 122 GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAE---VWRATAIVFVIILAGLQMISR 178
G IS+ + E+ LA+ + VW V + LAGL I +
Sbjct: 131 D---------GAISTVLGH-RIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG----RDIP 234
+ AA GA W R RI +PML+P++ L+ + A QVF V+ L G
Sbjct: 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240
Query: 235 VLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFL 275
++A + + G AS+ A + L I +GA V+ L
Sbjct: 241 LVAHRIYAEAFGAAAIGRASVMA--VVLFVILVGATVVQHL 279
>gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus solfataricus]
Length = 297
Score = 80.0 bits (194), Expect = 3e-14
Identities = 67/288 (23%), Positives = 127/288 (43%), Gaps = 19/288 (6%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNG-----AFSLDTVRRAI---SDPT 55
K K + P V+ +F +PL+ ++Y++FT +S +R +
Sbjct: 8 KEKLFSLFYILPIVIVTVFLFVFPLLYSVYISFTNLSLLHFLTYSYVGLRNYLIIFQYGY 67
Query: 56 FWEALKYTILLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIW 114
F E LK T++ + + + L VLAL +N+ KG+ + L++P + LIW
Sbjct: 68 FLELLKNTLIWTIGSLLTMMSLGFVLALILNQTDLKGRSIFYAILILPWAFPGFISILIW 127
Query: 115 YTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGL 173
+ D YG +N+L+L L + +E +A W + + + L
Sbjct: 128 QGLWVDPYGMMNRLILPLLHLPKVNSLTSTTDAWIELIA---TNDWLSFPYFMTVFYSAL 184
Query: 174 QMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDI 233
Q I RE + A++ GA +T+ I +P LK +I I +F F +++L G
Sbjct: 185 QSIPRELYDIADLDGANAFTKFLTITLPSLKRTIAFVFITSFVFTWNNFYPIYVLTGGG- 243
Query: 234 PVLAGEGF-----YQLTEIKDYGVASIYALTIALLSIFLGALYVKFLK 276
P ++ E F + ++ +A+ +++ + I LG + +K+ +
Sbjct: 244 PGISTETFIVYAYQEAFSYNNFALAAAWSIISTIFVIVLGIIVIKYTR 291
>sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1038
>gi|7442711|pir||B71097 hypothetical protein PH1038 -
Pyrococcus horikoshii >gi|3257453|dbj|BAA30136.1|
(AP000004) 291aa long hypothetical protein [Pyrococcus
horikoshii]
Length = 291
Score = 80.0 bits (194), Expect = 3e-14
Identities = 65/283 (22%), Positives = 128/283 (44%), Gaps = 22/283 (7%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-SLDTVRRAISDPTF----------- 56
P+ L PA+ ++ F+ YP+ + +YL+F F L+ + + P
Sbjct: 7 PFFFLLPALTLMVPFVIYPVFKTIYLSFFLGDKFVGLENYKNVLLSPDIVNLERFPTKSP 66
Query: 57 -WEALKYTILLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIW 114
W AL + I+ + +P + L L AL + + KG + + + + I V GLI
Sbjct: 67 PWGALIHNIVWIAIHLPTTIFLGLGFALLLRKKEVKGSSIIKSIIFLGMVIPMVVGGLII 126
Query: 115 YTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGL 173
+ + G I +GI I + Y + ++++ +W T ++ AGL
Sbjct: 127 RFLFEEGAGVIPAFFKLIGIEKLAITWTAYPQTAL--FSVILGSIWIWTGFSMLMYSAGL 184
Query: 174 QMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRD- 232
I ++Y EAA + GA + R ++ P+L+P + + L+ +++F +V++ G
Sbjct: 185 ASIPKDYYEAALIDGANKFQIFRFVIWPLLRPITVVIVAMTLLWDLKIFDIVYVATGGGP 244
Query: 233 ---IPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYV 272
VLA + + +Y A++ A+ + L+ F+ AL++
Sbjct: 245 GGASMVLALQMWDYFARSLNYNYAAVVAVLLTALT-FIPALWL 286
>gb|AAC98811.1| (U75905) putative ABC-type sugar transporter [Pseudomonas putida]
Length = 302
Score = 80.0 bits (194), Expect = 3e-14
Identities = 64/279 (22%), Positives = 133/279 (46%), Gaps = 16/279 (5%)
Query: 6 KYIPYLLLTPAV-VYLLFFIGYPLIQALYLAFTKNGAF------SLDTVRRAISDPTFWE 58
+++P L+L P++ + L+ F GY ++ L+FT + L +R + +W
Sbjct: 18 RWLPKLVLAPSMFIVLVGFYGY-ILWTFVLSFTTSTFLPSYNWAGLAQYQRLFDNDRWWV 76
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTML 118
A K + + + + L++ ++LA+ +++ + + + P+ +S + G W +L
Sbjct: 77 ASKNLAVFGGMFIGISLVVGVILAVFLDQRIRREGFIRTIYLYPMALSMIVTGTAWKWLL 136
Query: 119 SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISR 178
+ ++KLL + G + + R++ +VIA VW+A+ + + LAGL+ + +
Sbjct: 137 NPGMGLDKLLRDWGWEGFRLDWLIDPDRVV--YCLVIAAVWQASGFIMAMFLAGLRGVDQ 194
Query: 179 EYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA------GRD 232
+ AA++ GA T ++V+P L+P SA++I A++ F +V + D
Sbjct: 195 SIIRAAQIDGASLPTIYLKVVLPSLRPVFFSAVMILAHIAIKSFDLVAAMTAGGPGYSSD 254
Query: 233 IPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALY 271
+P + F G AS + A+ +I + LY
Sbjct: 255 LPAMFMYSFTFSRGQMGMGSASAILMLGAIRAIVVPYLY 293
>pir||T37228 probable sugar transport system permease protein - Streptomyces
coelicolor >gi|3559968|emb|CAA20606.1| (AL031514)
putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 324
Score = 79.6 bits (193), Expect = 4e-14
Identities = 60/233 (25%), Positives = 103/233 (43%), Gaps = 13/233 (5%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTIL 65
K P+L L + L+ F P+ +Y +FT S D R + + E L
Sbjct: 42 KLTPWLFLLAPLALLITFTYVPVGNMIYYSFTDWDGVSPD--RDYVGAENYTEIFTRPEL 99
Query: 66 LALVIVP--------VQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
L + V VQ+++AL A ++ + ++L L P I+ VA G ++
Sbjct: 100 LRVFAVSFYYLAASVVQIVIALYFAAVLSFDLRFRNLFKGILFFPYLINGVAIGFVFLYF 159
Query: 118 LSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMIS 177
D G ++ +L G + E + VWR T + FV+ L +Q I
Sbjct: 160 FQDGGTLDSVLSWFGAGTDHAWLGSPESANTSMAGV---SVWRFTGLNFVLFLGAIQSIP 216
Query: 178 REYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG 230
E EAA++ GAG W + R I+ P ++P + ++I+ ++ VF + +I+ G
Sbjct: 217 GELYEAAQLDGAGRWKQFRHIIAPSIRPVLSLSVILAISGSLSVFEIPYIMTG 269
>dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 430
Score = 79.6 bits (193), Expect = 4e-14
Identities = 73/307 (23%), Positives = 133/307 (42%), Gaps = 39/307 (12%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-----------LDTVRRAISDP 54
K PY+L+ P +++L+F + +PL+ L LAFT ++ D + ++ P
Sbjct: 128 KGFPYMLIGPGLIFLIFTVVFPLLFMLGLAFTNYNLYNAPPRNLLDWVGFDNFVQLVTVP 187
Query: 55 ----TFWEALKYTILLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVA 109
TF+ +T++ V Q+ L L LA+ VN K K L++P +
Sbjct: 188 IWRETFFSVFSWTLIWTFVATSCQIALGLFLAMMVNDPRIKFKKFIRTILILPWAVPAFV 247
Query: 110 AGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEF---LAIVIAEVWRATAIV 165
LI+ M +D +G IN+ +L P+ G + F A+++ + W V
Sbjct: 248 TILIFSAMFNDNFGAINRDIL------IPLFGHGAPWLTDPFWSRFALIMIQTWLGFPFV 301
Query: 166 FVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVV 225
F + LQ IS ++ EAA++ GA + R I +P + + LI++ F ++
Sbjct: 302 FALFTGVLQSISSDWYEAADMDGANRLQKFRHITMPHILFATAPLLIMQYAGNFNNFTII 361
Query: 226 WILAGRDIPVLAGEGFYQLTEIKDYGVASIYALTI--------ALLSIFLGALYVKFLKA 277
++ P+ Q D ++ +Y+LT A +SI +G + F
Sbjct: 362 YLFNQGGPPIRG-----QNAGGTDILISWVYSLTFENSQYSMAAAISIIIGLIVAGFALF 416
Query: 278 EYLEVRT 284
++ R+
Sbjct: 417 QFRRSRS 423
>emb|CAB71197.1| (AL138538) putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 314
Score = 79.2 bits (192), Expect = 5e-14
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 32/288 (11%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRR------AISD-PTFWEALKYTIL 65
++P +V F YPL+ +Y + K F + R D P FW AL+ T+
Sbjct: 21 MSPWLVGFAVFFAYPLVSTVYFSLMKYDGFGVPQFRGLENWAYVFQDYPLFWPALRNTLW 80
Query: 66 LALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSD-YGFI 124
L LV+V +++ L + L + + G + +P VAA L + +L+ G +
Sbjct: 81 LVLVMVTCRVVFGLGVGLLITKIRTGAGVFRTLFYLPYLAPPVAATLAFVFLLNPGTGPV 140
Query: 125 NKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
N +L LG+ +P F + A+ VW + VI +A L + +E EAA
Sbjct: 141 NSVLEGLGV-PAPGWFTDSAWSKPALTALA---VW-GVGDLMVIFMAALLDVPKEQYEAA 195
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG---- 240
E+ GA W R R + +P + P + A++ + MQ + + ++ G G
Sbjct: 196 ELDGASAWQRFRFVTLPNISPIVLFAVVTGVIQTMQYYTQPLVAGKVASGIIGGSGQSFE 255
Query: 241 --------------FYQL-TEIKDYGVASIYALTIALLSIFLGALYVK 273
Y L + DYG A + AL + L++ AL ++
Sbjct: 256 PGYPDKSTLTLPQLVYNLGFQRFDYGSACVVALVLFALAMAFTALLMR 303
>dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 418
Score = 79.2 bits (192), Expect = 5e-14
Identities = 79/297 (26%), Positives = 140/297 (46%), Gaps = 41/297 (13%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAF-----------SLDTVRRA 50
N+ + PYL+ P++ L+F + +P++ + LAFT + L+T +
Sbjct: 114 NLVEQGYPYLVSGPSLFILIFAVIFPILFSFALAFTNYNLYHSPPANLVDWVGLETFSKI 173
Query: 51 IS----DPTFWEALKYTILLALVIVPVQLILALVLALAVNRA---FKGKDLTIYALVIPL 103
+ TF++ L +T++ LV Q+ L ++LA+ VN+ FK TI L++P
Sbjct: 174 FTVDIWRATFFDVLSWTVIWTLVASTFQVSLGILLAVVVNQKDLQFKKFFRTI--LILPW 231
Query: 104 TISDVAAGLIWYTMLSD-YGFINK-LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRA 161
+ LI+ + +D +G IN +L GI PI + +A++ + W
Sbjct: 232 AVPGFVTILIFAGLFNDSFGAINNDILAAFGI--DPIPWMTNS--TWTKVALITIQGWLG 287
Query: 162 TAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQV 221
+F++ LQ I + EAA + GA +++ R I +PM+ +I +I + F
Sbjct: 288 FPYIFLVTTGVLQSIPDDLYEAATIDGASVFSKFRHITLPMILIAIAPVIITQFTFNFNN 347
Query: 222 FGVVWILAGRDIPVLAG----------EGFYQLT-EIKDYGVASIYALTIALLSIFL 267
F ++++ G P + G Y+LT + Y +A+ ALTI LLSIF+
Sbjct: 348 FNIIYLFNGGG-PAMPGSTAGGTDILVSWIYKLTMQSSQYSLAA--ALTI-LLSIFV 400
>pir||G82694 ABC transporter sulfate permease XF1346 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106343|gb|AAF84155.1|AE003966_16 (AE003966) ABC
transporter sulfate permease [Xylella fastidiosa]
Length = 319
Score = 78.8 bits (191), Expect = 7e-14
Identities = 74/292 (25%), Positives = 135/292 (45%), Gaps = 39/292 (13%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYT 63
+S ++ +LL+ A+ +LL F+ PL+ L F++ + RA+SDP A++ T
Sbjct: 33 ESLWVQWLLILGALGFLLAFLLLPLM----LVFSEALRGGVQVFLRAVSDPDALAAIRLT 88
Query: 64 ILLALVIVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
+L+ ++++PV ++ + +A AV++ F GK L + + +P ++S V AGL++ + G
Sbjct: 89 MLVTMIVLPVNMVFGVAVAWAVSKHQFPGKRLLVSLIDLPFSVSPVVAGLVFVLIFGRQG 148
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+ L+ + S P+ FG E + + V+ IV I I+RE +
Sbjct: 149 WAWPLIEDGVRFSLPL--FG------EVMVKLPRVVFALPGIVLATIFVTFPFIARELMP 200
Query: 183 -----------AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGR 231
AA GA W R+ +P ++ + ++ AM FG V +++G
Sbjct: 201 LMEQQGNEEELAALSLGASGWQTFWRVTLPNIRWGLLYGALLCGARAMGEFGAVSVVSGH 260
Query: 232 ----------DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
+ +L E Y + AS+ AL+ ALL++ L A K
Sbjct: 261 IRGRTNTMPLHVEILYSEYAYSAA----FACASLLALS-ALLTLALKAFLEK 307
>dbj|BAB04621.1| (AP001510) L-arabinose transport system (permease) [Bacillus
halodurans]
Length = 316
Score = 78.8 bits (191), Expect = 7e-14
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVR----RAISDPTFWEALK 61
K +PY+L++P ++ + YP +QA+ ++F + + V I +PTF+ AL+
Sbjct: 31 KVVPYVLISPFILSFIVLSFYPTVQAIVMSFQRVLPSEVTFVGLWNYSRILNPTFFTALQ 90
Query: 62 ----YTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
Y IL +++V + ++ A++L ++ K + L AL +P S + AG+++ M
Sbjct: 91 NTTTYMILTVVILVSIPMLFAVLLN---SKVVKFRILFRTALFLPALTSVIVAGMVFRLM 147
Query: 118 LS--DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
S D N++L +G+ S + + FL +V+A WR I + LA LQ
Sbjct: 148 FSESDTAVANQILNWIGLESVEWRYNAWSGM---FLMVVLAS-WRWMGINILYFLAALQN 203
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKP 205
+ +E EAA++ GA + + +P LKP
Sbjct: 204 VPKELYEAADIDGANVVQKFFYVTLPFLKP 233
>sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|280208|pir||F43670 integral membrane protein cysW -
Synechococcus sp >gi|154511|gb|AAA73047.1| (M65247)
integral membrane polypeptide of the sulfate permease
[Synechococcus PCC7942]
Length = 286
Score = 78.4 bits (190), Expect = 9e-14
Identities = 69/284 (24%), Positives = 125/284 (43%), Gaps = 32/284 (11%)
Query: 8 IPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLA 67
+P L+ +++Y+ I P AF++ L + + D EA++ T+L+
Sbjct: 21 LPLALIGISLLYVGLIIIIPAANVAVQAFSEG----LSGFIKNLGDRNLQEAIRLTLLMG 76
Query: 68 LVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINK 126
++ VP+ + L A A+ R F GK L + + +P +IS V AGL+ + G++
Sbjct: 77 VISVPLNTLFGLAAAFAIARKQFPGKSLLLSVIDLPFSISPVVAGLMIVLLYGRNGWLGP 136
Query: 127 LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEV 186
LL + I + + + +A ++ + V ++ L+ I + EAA
Sbjct: 137 LLESNDI-----------KIIFAWPGMALATIFVSMPFVAREVIPNLEEIGTDAEEAAST 185
Query: 187 FGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG------RDIPVLAGEG 240
GA W R+ +P +K S+ +++ T A+ FG V +++G + +P+ E
Sbjct: 186 LGANGWQTFWRVTLPSIKWSMLYGVVLTTARALGEFGAVSVVSGSITGKTQTLPLFVEEA 245
Query: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
+ K Y Y + L I L L +K L LE RT
Sbjct: 246 Y------KQYQTTLSYTAALLLGGISLVTLVLKAL----LEART 279
>pir||A72756 probable multiple sugar-binding transport system permease protein
APE0038 - Aeropyrum pernix (strain K1)
>gi|5103426|dbj|BAA78947.1| (AP000058) 265aa long
hypothetical multiple sugar-binding transport system
permease protein [Aeropyrum pernix]
Length = 265
Score = 78.0 bits (189), Expect = 1e-13
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
W AL + I+ + +P+ L L LA + F G + + I + I V GLI
Sbjct: 41 WGALIHNIIWMALHIPLVTFLGLFLAYLLKYTF-GSSIVKTIVFIGMVIPMVVGGLIVRF 99
Query: 117 MLSDY-GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
M +Y G + + LG+ + Y + L++++ VW T + A L
Sbjct: 100 MFDEYVGVVPLVFKALGVDFLAKTWTNYP--QLSLLSLILGSVWLWTGFSLTVYSAALGS 157
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA----GR 231
I ++EAA + GAG+W +IV P+++P+ +++ L+ +++F +V++ G
Sbjct: 158 IPSSFIEAARIDGAGHWHIFWKIVFPLVRPATIIVVVMTMLWDLKIFDIVYVATLGGPGG 217
Query: 232 DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSI 265
VLA + + DY AS A+ + LL++
Sbjct: 218 SSNVLALVMYQYMARALDYQAASAVAVILTLLTL 251
>emb|CAB72191.1| (AL138851) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 316
Score = 77.6 bits (188), Expect = 2e-13
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 27/293 (9%)
Query: 5 SKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRA-----------ISD 53
S P+L L PA+V L + YP+ Q ++F + + A D
Sbjct: 28 SSSTPWLYLAPALVVLGGLLVYPVYQLGLISFLEYTQAQVSGGEPATFQGFGNYAELFGD 87
Query: 54 PTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAG-L 112
FW L T++ A V L + LA+ + R L + + + G
Sbjct: 88 GEFWRVLLATVVFAAACVVSTLAVGCALAVLLTRVRAVPRLALMLAGLGAWATPAVTGST 147
Query: 113 IWYTMLS-DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILA 171
+W + D+G +N++L LG H + Y R FL +++ VW + V V + A
Sbjct: 148 VWLLLFDPDFGPVNRML-GLGD-----HSWTYG-RYSAFLLVLLEVVWCSFPFVMVTVYA 200
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI---- 227
G++ + E LEAA + GA W R ++ PML+P + I ++ +VF +++
Sbjct: 201 GIRAVPSEVLEAAALDGASQWRIWRSVLAPMLRPILVVVTIQSVIWDFKVFTQIYVMTNG 260
Query: 228 --LAGRDIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
+AG+++ VL + + Y + S + + L+ + + +Y++ L+ +
Sbjct: 261 GGIAGQNM-VLNVYAYQKAFASSQYSLGSAIGVVMLLILLAVTLVYLRLLRRQ 312
>sp|P10905|UGPA_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN UGPA
>gi|72501|pir||MMECUA sn-Glycerol-3-phosphate transport
system permease protein - Escherichia coli
>gi|43247|emb|CAA31532.1| (X13141) ugpA protein (AA
1-295) [Escherichia coli] >gi|466588|gb|AAB18427.1|
(U00039) CG Site No. 40 [Escherichia coli]
>gi|1789861|gb|AAC76477.1| (AE000421) sn-glycerol
3-phosphate transport system, integral membrane protein
[Escherichia coli K12]
Length = 295
Score = 77.3 bits (187), Expect = 2e-13
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTF 56
+S+++PYLL+ P ++ + F +P +AL+ + F LD D +
Sbjct: 9 RSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYY 68
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
++ TI + + L+++L A V +G +++P ++ A ++W
Sbjct: 69 LDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIF 128
Query: 117 MLSDYGFINKLLLNLGIISSPIHFFGYEYRMME-----FLAIVIAEVWRATAIVFVIILA 171
+ + G+I+ + FGY++ + +V A VW+ + F+ A
Sbjct: 129 LFNP---------GRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYA 179
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFA 218
LQ I R +EAA + GAG R +I +P++ P L++ ++A
Sbjct: 180 ALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYA 226
>sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE PROTEIN MSMF
>gi|282318|pir||C42400 membrane protein MsmF -
Streptococcus mutans >gi|153738|gb|AAA26935.1| (M77351)
membrane protein [Streptococcus mutans]
Length = 290
Score = 77.3 bits (187), Expect = 2e-13
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 26/281 (9%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAF------TKNGAF-SLDTVRRAISDPTFWEALKYTI 64
L+ P ++ ++FF +P+ Q + +F T N F ++ + ++D F +A+ +T+
Sbjct: 16 LIVPLILQVVFFY-FPMFQGAFYSFINWTGLTYNFDFVGINNYKILMTDGKFMKAIGFTL 74
Query: 65 LLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFI 124
+ L ++ +++L +++A A+N KGK P +S + LI + + +YG
Sbjct: 75 VSTLALIVGEIVLGIIIARALNAKIKGKTFFRAWFFFPAVLSGLTVSLI-FKQVFNYG-- 131
Query: 125 NKLLLNLGIISSPIHFFGYEYRMM-----EFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
L + S + E M+ +A + +W+ A+ ++ L+GLQ I E
Sbjct: 132 ------LPAVGSALGIKFLETSMLGTANGAVIASIFVLLWQGVAMPIILFLSGLQSIPSE 185
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIPVL 236
+EAA + GA + +P L PSI I+ + F ++ L G +
Sbjct: 186 IVEAAAIDGADSKQTFWSVELPYLLPSISMVFIMALKAGLTAFDQIFALTGGGPNNSTTS 245
Query: 237 AGEGFYQLT-EIKDYGVASIYALTIALLSIFLGALYVKFLK 276
G Y + YG A+ AL + ++ + L +K K
Sbjct: 246 LGLLVYNYAFKSNQYGYANAIALILFIIIGIVSVLQIKLSK 286
>sp|P23860|POTB_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTB
>gi|96438|pir||B40840 spermidine/putrescine transport
system permease potB [validated] - Escherichia coli
>gi|147327|gb|AAC37039.1| (M64519) transport protein
[Escherichia coli] >gi|1651552|dbj|BAA35945.1| (D90747)
Spermidine/putrescine transport system permease protein
PotB. [Escherichia coli] >gi|1787369|gb|AAC74209.1|
(AE000212) spermidine/putrescine transport system
permease [Escherichia coli K12]
Length = 275
Score = 76.9 bits (186), Expect = 3e-13
Identities = 66/277 (23%), Positives = 132/277 (46%), Gaps = 18/277 (6%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAF-TKNGA------FSLDTVRRAISDPTFWEALKYTI 64
++ V +L+ F+ P + + +F T++ A F+LD R + DP ++E L +++
Sbjct: 1 MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLL-DPLYFEVLLHSL 59
Query: 65 LLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+AL+ L+L A + + K + L ++ L++P + + LS G+
Sbjct: 60 NMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGY 119
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N+ LL LG+I +PI M A++I V+ + + + + ++ + + LEA
Sbjct: 120 LNEFLLWLGVIDTPIRI------MFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEA 173
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQ 243
A GA RI+IP+ P I + ++ L AM +F V ++ G ++ Q
Sbjct: 174 ARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQ 233
Query: 244 LTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYL 280
I+D+ + ++T L+I +G + + + +A L
Sbjct: 234 FLNIRDWPFGAATSIT---LTIVMGLMLLVYWRASRL 267
>dbj|BAA36746.1| (AB016764) potB [Escherichia coli]
Length = 274
Score = 76.9 bits (186), Expect = 3e-13
Identities = 66/277 (23%), Positives = 132/277 (46%), Gaps = 18/277 (6%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAF-TKNGA------FSLDTVRRAISDPTFWEALKYTI 64
++ V +L+ F+ P + + +F T++ A F+LD R + DP ++E L +++
Sbjct: 1 MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLL-DPLYFEVLLHSL 59
Query: 65 LLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+AL+ L+L A + + K + L ++ L++P + + LS G+
Sbjct: 60 NMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGY 119
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N+ LL LG+I +PI M A++I V+ + + + + ++ + + LEA
Sbjct: 120 LNEFLLWLGVIDTPIRI------MFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEA 173
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQ 243
A GA RI+IP+ P I + ++ L AM +F V ++ G ++ Q
Sbjct: 174 ARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQ 233
Query: 244 LTEIKDYGVASIYALTIALLSIFLGALYVKFLKAEYL 280
I+D+ + ++T L+I +G + + + +A L
Sbjct: 234 FLNIRDWPFGAATSIT---LTIVMGLMLLVYWRASRL 267
>emb|CAB61863.1| (AL133252) putative ABC-transporter transport protein [Streptomyces
coelicolor A3(2)]
Length = 285
Score = 76.9 bits (186), Expect = 3e-13
Identities = 72/279 (25%), Positives = 120/279 (42%), Gaps = 8/279 (2%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALY--LAFTKNGAFSLDTVRRAISDPTFWEALKYTILLAL 68
LLLT + ++ F G L+ A LA +SL + DP F ++L ++ +A
Sbjct: 8 LLLTAPALAVVAFAGGALLLAARGSLADGLGRGWSLSAYAGLLQDPAFADSLLLSLKIAT 67
Query: 69 VIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL 128
+ + LAL + AV+ + +G+ A L + + A + +LS G I++L
Sbjct: 68 LSTVMSAALALAVVGAVSGSRRGRAALETAARATLAVPHLLAAAAFALLLSGSGLISRLT 127
Query: 129 LNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFG 188
G P F A+V+ VW+ V +++LA R+ A G
Sbjct: 128 HAAGWTDGPADFPALVAGTTPS-AVVLTYVWKEAPFVTIMLLAAYTPAVRDLENAIRTLG 186
Query: 189 AGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG---RDIPVLAGEGFYQLT 245
AG R+R + +P+L P++ A ++ F + +L R +PV A E Y+
Sbjct: 187 AGRMRRMRHVTLPLLAPALTEACLLVFAFTFAAYEAPALLGATVPRALPVEAVE-LYRSV 245
Query: 246 EIKDYGVASIYALTIALLSIFLGALYVKFLKAEYLEVRT 284
E+ D A A+ I ++ I L AL + L RT
Sbjct: 246 ELADRPAALALAVVIGMV-IALAALAAAAISRRLLLART 283
>emb|CAB94618.1| (AL359214) putative sugar transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 328
Score = 76.9 bits (186), Expect = 3e-13
Identities = 62/283 (21%), Positives = 122/283 (42%), Gaps = 17/283 (6%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSL----------DTVRRAISDPTFWE 58
PYLLL PA + +G+PL++ L+F L D + ++ FW
Sbjct: 39 PYLLLLPAAAATVLLLGWPLVKDGLLSFQNLNMAQLIQHVTEWTGFDNYKEVLTGEDFWR 98
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKG-KDLTIYALVIPLTISDVAAGLIWYTM 117
+I+ V V + +++ ++ L + R + + + + LV+ + VAA ++ +
Sbjct: 99 VTVRSIIFTAVNVVLTMVVGGLIGLLLARLGRVMRFVLMIGLVLAWAMPVVAATTVYQWL 158
Query: 118 LSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMI 176
+ +G +N +L LG S F + F + + VW + V + + A I
Sbjct: 159 FAQRFGVVNWVLDKLGW-HSMADFSWTGSQFSTFFVVTVLIVWMSVPFVAINLYAATTTI 217
Query: 177 SREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG----RD 232
E EAA + GAG W + +P L+P + + + ++ + F V+ G R
Sbjct: 218 PDELYEAAALDGAGMWRSFTSVTLPFLRPFLYATTFLEVIWIFKAFVQVYTFNGGGPDRL 277
Query: 233 IPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGALYVKFL 275
+L + + + YG+ + A+ L+ + L A Y++ +
Sbjct: 278 TEILPVYAYIEGVGNQHYGMGAAIAVLTILILLGLTAYYLRIV 320
>sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALC
>gi|479207|pir||S32570 malC protein - Streptococcus
pneumoniae >gi|153724|gb|AAA26926.1| (L08611) MalC
[Streptococcus pneumoniae]
Length = 430
Score = 76.5 bits (185), Expect = 3e-13
Identities = 81/315 (25%), Positives = 134/315 (41%), Gaps = 52/315 (16%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTK--------------------NGAFSLDTVR 48
PYLL+ P+ V + F I +P+I L +AFT +SL T R
Sbjct: 124 PYLLIIPSYVAMTFAIIFPVIVTLMIAFTNYDFQHLPPNKLLDWVGLTNFTNIWSLSTFR 183
Query: 49 RAISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIP--LTI 105
A F L +TI+ AL +Q+++ + A+ N+ F KGK I+ ++ P L +
Sbjct: 184 SA-----FGSVLSWTIIWALAASTLQIVIGIFTAIIANQPFIKGK--RIFGVIFPSSLAV 236
Query: 106 SDVAAGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEF------LAIVIAEV 158
L + M +D G IN +L I++ + F + +A+++ +
Sbjct: 237 PAFITILTFSNMFNDSVGAINTQVLP--ILAKFLPFLDGALIPWKTDPTWTKIALIMMQG 294
Query: 159 WRATAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFA 218
W ++V+ L LQ I + EAA + GA W + R I PM+ LI + F
Sbjct: 295 WLGFPYIYVLTLGILQSIPNDLYEAAYIDGANAWQKFRNITFPMILAVAAPTLISQYTFN 354
Query: 219 MQVFGVVWILAGRDIPVLAGEG----------FYQLT--EIKDYGVASIYALTIALLSIF 266
F ++++ G P G G Y+LT Y +A+ L I+++ I
Sbjct: 355 FNNFSIMYLFNGGG-PGSVGGGAGSTDILISWIYRLTTGTSPQYSMAAAVTLIISIIVIS 413
Query: 267 LGALYVKFLKAEYLE 281
+ + K L A +E
Sbjct: 414 ISMIAFKKLHAFDME 428
>gi|10955068 agtC [Agrobacterium tumefaciens]
>gi|6689866|gb|AAF23879.1|AF117204_4 (AF242881) agtC
[Agrobacterium tumefaciens]
Length = 313
Score = 76.5 bits (185), Expect = 3e-13
Identities = 68/254 (26%), Positives = 117/254 (45%), Gaps = 10/254 (3%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVIV 71
LL P V LL PL+ L AF G ++ + + P + + + T+ ++L
Sbjct: 14 LLLPVFVVLLLAFFVPLLAILPQAF---GGDAVARFLKIFAGPVYLKIIWTTVRMSLEAT 70
Query: 72 PVQLILALVLALAVNRAFKGKDLTIYALV-IPLTISDVAAGLIWYTMLSDYGFINKLLLN 130
+ LI++ LA ++RA K L + LV +P S + W +L G +N LL+
Sbjct: 71 AITLIVSFPLAWLLSRATGIKALLLGLLVLVPFLTSVLVRTFAWIAILGQRGLVNGTLLS 130
Query: 131 LGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGAG 190
LG+IS P+ E A+V+A V + ++ ++ L+ I L AA GA
Sbjct: 131 LGLISEPLPLLFSE------PAVVLALVHSSIPMMVFSLVTVLRRIDGRILLAANTLGAN 184
Query: 191 YWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLTEIKDY 250
+VIP+ IQS +II LF + F +L + +LA ++ D+
Sbjct: 185 PLRAWLGVVIPLSIRGIQSGVIITFLFTIASFIAPALLGNQRQQMLAQVIQSEIETGADW 244
Query: 251 GVASIYALTIALLS 264
+A+ +T+A+++
Sbjct: 245 ALAAALGITLAVVA 258
>dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bacillus halodurans]
Length = 293
Score = 76.5 bits (185), Expect = 3e-13
Identities = 58/276 (21%), Positives = 122/276 (44%), Gaps = 15/276 (5%)
Query: 3 IKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTF 56
+ K + L + PA++ +L I P++ Y L+ + D F
Sbjct: 5 MSDKKVIALYVLPALLLILVLIYIPIVLTGYYGLMDWDGIGPMTFIGLENYANLLVDKMF 64
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
W + +++LLA+ V + L++ L ++L + KG DL +IP+ +S VA +W
Sbjct: 65 WSSAYHSLLLAIFSV-LSLVIYLAISLVLTGNIKGADLFRKIFLIPMLLSSVAIAQLWMR 123
Query: 117 MLSDY-GFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
+ G N+ L +LGI + P+ + AI I +W+ +I A L+
Sbjct: 124 IYHPTNGVFNRFLTSLGIENPPLWLSDTN---IVLFAIFIPILWQYAGFYILIYYAALRN 180
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA----GR 231
+ E +EAA++ GA ++ +P++ I+ +++ + +++ F +++++
Sbjct: 181 VPNELVEAAQIDGATPLQIAYKVKLPLIAGVIKVTVVLAVIGSLKYFDLIYVMTDGGPNG 240
Query: 232 DIPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFL 267
V+A + D+G S + +L + +
Sbjct: 241 ASEVMASYMYKLAFRTNDFGYGSAIGFFLLILILII 276
>gb|AAC12801.1| (U67851) ChtJ [Agrobacterium sp.] >gi|3153870|gb|AAC17433.1|
(AF065242) putative inner membrane protein ChtI
[Agrobacterium tumefaciens]
Length = 295
Score = 76.1 bits (184), Expect = 5e-13
Identities = 70/260 (26%), Positives = 115/260 (43%), Gaps = 10/260 (3%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVIV 71
LL P + LL PL+ L AF N A + P + + + T+ + L
Sbjct: 14 LLAPVFILLLVPFALPLLYILPSAFGGNAA---GRFLKIFESPVYLKIIWTTVRITLEAT 70
Query: 72 PVQLILALVLALAVNRAFKGKDLTIYALV-IPLTISDVAAGLIWYTMLSDYGFINKLLLN 130
+ L+++ LA ++RA K + + LV +P S + W +L G IN LL+
Sbjct: 71 AITLVVSFPLAWLLSRATGFKAMFLGLLVLVPFLSSVLVRTFAWLAILGQRGLINGTLLS 130
Query: 131 LGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGAG 190
LG+IS P+ E A+++A V + ++ ++ L+ I L AA GA
Sbjct: 131 LGLISEPLPLLFSE------PAVILALVHSSIPMMAFALVTVLRRIDGRVLLAANTLGAN 184
Query: 191 YWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLTEIKDY 250
IVIP+ IQS +II LF + F L + +LA ++ D+
Sbjct: 185 PLRAWFGIVIPLSISGIQSGVIIIFLFTIASFIAPAFLGNQRQQMLAQVIQSEIETGADW 244
Query: 251 GVASIYALTIALLSIFLGAL 270
A+ +T+AL++ + AL
Sbjct: 245 PFAAALGITLALIATIVVAL 264
>sp|P39128|LPLB_BACSU LPLB PROTEIN >gi|7475932|pir||A69653 transmembrane lipoprotein lplB
- Bacillus subtilis >gi|2633024|emb|CAB12530.1| (Z99107)
transmembrane lipoprotein [Bacillus subtilis]
Length = 318
Score = 75.7 bits (183), Expect = 6e-13
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQAL--------YLAFTKNGAFSLDTVRRAISDPTFWEALK 61
YLLL P ++Y L F P+ L YL F K+ D + +P F+ L+
Sbjct: 32 YLLLIPGLLYFLIFKYLPMWGVLIAFKDYSPYLGFWKSEWVGFDYFKDFFMNPDFFRLLR 91
Query: 62 YTILLA----LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
T++LA L P LILAL+L V +A + + + V + + +
Sbjct: 92 NTLMLASLDLLFAFPAPLILALLLN-EVRKAVYKRCIQTFIYVPHFVSWTIVVSITFVFF 150
Query: 118 LSDYGFINKLLLNLGIISSPIHFFGYE--YRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
D G INKL+++L I F +R M IV+ +W+ T ++ LA L
Sbjct: 151 TVDTGVINKLIMSL--TGEQISFLSDADWFRPM----IVMQSIWKETGWGTILFLAALAT 204
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPV 235
+ +E EAA + GAG + R+ I +P ++ +I LI+R +
Sbjct: 205 VDQEQYEAAIMDGAGRFRRMWHITLPAIRSTIIVLLILRIGSFLN--------------- 249
Query: 236 LAGEGFYQLTEIKDYGVASIYALTIALLSIFLGA 269
L E Y +T + VA I+ + ++ I GA
Sbjct: 250 LGFEQVYLMTNSLNRSVADIFDTYVYMMGITQGA 283
>dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus halodurans]
Length = 328
Score = 75.7 bits (183), Expect = 6e-13
Identities = 57/251 (22%), Positives = 113/251 (44%), Gaps = 31/251 (12%)
Query: 4 KSKYIPYLLLTPAV----VYLLFFIGYP----------LIQALYLAFTKNGAFSLDTVRR 49
K ++ L L P++ V++ FIG+ L+ A KN F R
Sbjct: 30 KDQWYAILFLAPSILLIGVFIYGFIGWTGYVSLSNWNSLVPDFSFAGLKNYLFLFQDFR- 88
Query: 50 AISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVA 109
F L+ T+ ++ + ++L +A+ +++ + + L P+ +S V
Sbjct: 89 ------FQADLRNTLFFTILFIGAVIVLGQGIAILLDQKIRQESLFRNIFFFPMALSFVV 142
Query: 110 AGLIWYTMLSDYGFINKLLLNLGI---------ISSPIHFFGYEYRM-MEFLAIVIAEVW 159
G++W +L+ +N L G+ I I E+ + + +A+VIA VW
Sbjct: 143 TGVVWQWLLNPSTGVNLFLERFGLDSRWYTDTTIVPAISLGKIEFGLPVAMIAVVIAAVW 202
Query: 160 RATAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAM 219
+ T + LAGL+ I + EAA + GA + ++++P+L+P S +II ++
Sbjct: 203 QMTGFAVAMYLAGLRGIPDDVREAARMDGANEFQVYWKVILPLLRPITMSVIIIMAHISL 262
Query: 220 QVFGVVWILAG 230
++F +++ + G
Sbjct: 263 KIFDLIFAMTG 273
>gb|AAA22575.1| (L19163) transmembrane protein [Bacillus subtilis]
Length = 318
Score = 75.3 bits (182), Expect = 8e-13
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQAL--------YLAFTKNGAFSLDTVRRAISDPTFWEALK 61
YLLL P ++Y L F P+ L YL F K+ D + +P F+ L+
Sbjct: 32 YLLLIPGLLYFLIFKYLPMWGVLIAFKDYSPYLGFWKSEWVGFDYFKDFFMNPDFFRLLR 91
Query: 62 YTILLA----LVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTM 117
T++LA L P LILAL+L V +A + + + V + + +
Sbjct: 92 NTLMLASLDLLFAFPAPLILALLLN-EVRKAVYKRCIQTFIYVPHFVSWTIVVSITFVFF 150
Query: 118 LSDYGFINKLLLNLGIISSPIHFFGYE--YRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
D G INKL+++L I F +R M IV+ +W+ T ++ LA L
Sbjct: 151 TVDTGVINKLIMSL--TGEQISFLSDADWFRPM----IVMQSIWKETGWGTILFLAALAT 204
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPV 235
+ +E EAA + GAG + R+ I +P ++ +I LI+R +
Sbjct: 205 VDQEQYEAAIMDGAGRFRRMWHITLPAIRSTIIVLLILRIGSFLN--------------- 249
Query: 236 LAGEGFYQLTEIKDYGVASIYALTIALLSIFLGA 269
L E Y +T + VA I+ + ++ I GA
Sbjct: 250 LRFEQVYLMTNSLNRSVADIFDTYVYMMGITQGA 283
>gb|AAB67295.1| (U59485) AttA2 [Agrobacterium tumefaciens]
Length = 300
Score = 75.3 bits (182), Expect = 8e-13
Identities = 69/262 (26%), Positives = 118/262 (44%), Gaps = 15/262 (5%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVI 70
LLL PA + LL YPL + + L+ SL+ R DP + L T ++AL +
Sbjct: 34 LLLLPAALMLLTGFVYPLARLVALSMPD---MSLELYIRIFRDPLYLNVLFSTTVVALAV 90
Query: 71 VPVQLILALVLALAVNRAFKGKDLTIYALV-IPLTISDVAAGLIWYTMLSDYGFINKLLL 129
+ L+L +A A+ R L + V IPL S + W +L G IN+ LL
Sbjct: 91 MCCCLLLGFPVANAMVRLKHPWTLILTGCVLIPLWTSVLVRSYAWIVLLQRTGIINQALL 150
Query: 130 NLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGA 189
+ +I P+ + A+++A + + I A L+ I EY++AA G+
Sbjct: 151 STKLIDEPLRMIYTQG------AVIVAMTHVLLPFMIMPIFAALRAIPPEYVQAAMNLGS 204
Query: 190 GYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLTEIKD 249
R I++P+ P I + +I + A+ + ++ G ++A Q T + D
Sbjct: 205 TRLHAFRAIIVPLSLPGIFAGCVISFVLALGFYVTPALVGGAGSLMVATLIGQQTTVLLD 264
Query: 250 YGVA-----SIYALTIALLSIF 266
+ A S+ +T+A++ IF
Sbjct: 265 WPFAAALSTSLLVVTLAVVIIF 286
>pir||H70033 maltodextrin transport system permease homolog yvdH - Bacillus
subtilis >gi|1945667|emb|CAB08037.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635973|emb|CAB15465.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 435
Score = 74.9 bits (181), Expect = 1e-12
Identities = 73/304 (24%), Positives = 129/304 (42%), Gaps = 35/304 (11%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRR---------------A 50
K PYL PA + ++F I +P++ L++A T + + R
Sbjct: 126 KGFPYLFTLPAYIMMVFVIIFPVLVTLFVALTNYDFYHIPPNRLIDWVGFKNFLNIFFLG 185
Query: 51 ISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVA 109
TF L +T++ + +Q+IL +V AL VN+ F KGK + + P +
Sbjct: 186 SYRETFVNVLGWTVIWTICATTLQIILGIVTALFVNQDFIKGKRIFRMIFLFPWAVPAFI 245
Query: 110 AGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEF---LAIVIAEVWRATAIV 165
+ + M +D G +N ++ L + ++ F A+++ + W +
Sbjct: 246 TIMSFSNMFNDSIGAVNAQVIPLFNHLPFVELPAIAWKTDPFWTKTALIMIQTWLGFPYI 305
Query: 166 FVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVV 225
+V++ LQ I E EAA++ GA + R R I PM+ + +I + F F ++
Sbjct: 306 YVMVTGVLQAIPGELYEAAKIDGATFIQRFRHITFPMILFATAPVMITQYTFNFNNFSII 365
Query: 226 WILAGRDIPVLAGEG----------FYQLT--EIKDYGVASIYALTIALLSIFLGALYVK 273
+ L P AG G Y+LT Y VA+ A+T+ + I +G +
Sbjct: 366 Y-LFNEGGPGSAGAGAGSTDILISWIYKLTTGTSPQYSVAA--AVTLLISFIVIGISLIA 422
Query: 274 FLKA 277
F K+
Sbjct: 423 FKKS 426
>pir||A72283 maltose ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981755|gb|AAD36278.1|AE001777_4
(AE001777) maltose ABC transporter, permease protein
[Thermotoga maritima]
Length = 577
Score = 74.9 bits (181), Expect = 1e-12
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 27/248 (10%)
Query: 49 RAISDPT----FWEALKYTILLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPL 103
R + DP F+ +T + A++ V + L + L AL +N KG++L L+IP
Sbjct: 324 RIVKDPKVSGPFFRIFLWTFVWAVLSVVLSLAVGLPFALVLNNPRLKGRNLYRTLLIIPW 383
Query: 104 TISDVAAGLIWYTML--SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRA 161
I + L+W L YG INK LL L + PI +F + + +++ VW
Sbjct: 384 AIPVFISALVWRNGLLNESYGVINKFLLPLFGLE-PIKWFNDPFWAR--VGVLLVNVWLT 440
Query: 162 TAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQV 221
+ I L LQ I E E A + GAG + R I P+L I L+ F+
Sbjct: 441 FPYMMTISLGALQSIPPELYEVAAIDGAGRFRRFVHITFPLLMTIIAPLLVSSFAFSFNN 500
Query: 222 FGVVWILAGRDIPVLAGEGFYQLTEI---------------KDYGVASIYALTIALLSIF 266
F +++++ G P+ T+I +D+G AS A++I + +
Sbjct: 501 FTIIYLITGGGPPIPNSTTPTGYTDILISYVYKLAFEGGQGQDFGFAS--AISILIFFLV 558
Query: 267 LGALYVKF 274
G +V F
Sbjct: 559 GGISFVNF 566
>pir||B82310 sulfate ABC transporter, permease protein VC0540 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654968|gb|AAF93708.1| (AE004140) sulfate ABC
transporter, permease protein [Vibrio cholerae]
Length = 287
Score = 74.9 bits (181), Expect = 1e-12
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 23/271 (8%)
Query: 7 YIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILL 66
++ + L+ A++ + + PL+ AF NG + +DP A+ T+++
Sbjct: 14 WVKWSLIALALLLVAVLLLIPLLSIFQQAFA-NG---ISAYFSYFNDPDTRHAIGLTLVV 69
Query: 67 ALVIVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFIN 125
AL+ VP+ L+ ++L+ V R F G+ I + IP +S V AGL++ + G++
Sbjct: 70 ALLTVPINLVFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLG 129
Query: 126 KLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAE 185
+ L + M + IV+ V+ V ++ +Q R EAA
Sbjct: 130 EWLYERDL-----------QIMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAV 178
Query: 186 VFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG------RDIPVLAGE 239
+ GA +W RR+ +P +K ++ +I+ A+ FG V +++G +P+
Sbjct: 179 ILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQL 238
Query: 240 GFYQLTEIKDYGVASIYALTIALLSIFLGAL 270
+ + AS+ A IALL++ L AL
Sbjct: 239 LYEDYQSQAAFASASLLAF-IALLTLLLKAL 268
>gb|AAB95373.1| (U75349) putative permease BitE [Brachyspira hyodysenteriae]
Length = 277
Score = 74.1 bits (179), Expect = 2e-12
Identities = 58/277 (20%), Positives = 122/277 (43%), Gaps = 28/277 (10%)
Query: 3 IKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFT--KNGAFSLDTVRRAISDPTFWEAL 60
+K + Y+ L AV++ LF + YPL +F + GA++LD R S +++AL
Sbjct: 5 LKIDFWTYITLIIAVIFALFLV-YPLFSLFISSFKDPETGAWTLDNFLRFFSRKYYYQAL 63
Query: 61 KYTILLALVIVPVQLILALVLALAVN-RAFKGKDLTIYALVIPLTISDVAAGLIWYTMLS 119
+ + + + + +++ +A ++ KGK ++I + W +L
Sbjct: 64 VNSFSVTICVTILAIVIGTPMAYFMSVYKIKGKTFLEILIIISMMSPAFIGAYSWILLLG 123
Query: 120 DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISRE 179
G + K GI + I+ FG I++ + +F+ + L I
Sbjct: 124 RSGVVTKFFAGFGISTPTIYGFG---------GILLVFTLKLYPFIFMYVSGALSKIDVS 174
Query: 180 YLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGE 239
+EAAE G + ++ I +P++ P+I + ++ + A+ FG P+L GE
Sbjct: 175 LMEAAESLGCSPFKKVVTIAMPLITPTILAGSLLVFMNALADFGT---------PMLIGE 225
Query: 240 GFYQLTE------IKDYGVASIYALTIALLSIFLGAL 270
G+ + + + G + ++ ++A + +F+ A+
Sbjct: 226 GYRTMPTMIYSEFVSEVGGNANFSASMASIMVFITAM 262
>emb|CAB91123.1| (AL355913) putative transport system integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 73.7 bits (178), Expect = 2e-12
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTK-------NGAFS--------LDTVRRAISDPT 55
L+ PAV+ +L F P++ + +AF + NG S L+ +R D
Sbjct: 54 LMTLPAVLLVLLFNYVPILGNV-VAFQEYDPYLSDNGIVSILHSPWVGLENFQRIFEDSA 112
Query: 56 FWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYA--LVIPLTISDVAAGLI 113
FW +++ T++L L+ + + + + LAL +N + + I L +P S V +
Sbjct: 113 FWNSVRNTLVLFLLQLVLYFPIPIALALLINSVVRPRVRAISQAILYLPHFFSWVLVIAV 172
Query: 114 WYTMLSDYGFINKLLLN-----LGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVI 168
+ +L G +++LL + LG+++ P F +FL + VW+ ++
Sbjct: 173 FQQLLGGAGLLSQLLRDHGYDGLGVMTDPDTF--------KFL-VTAQSVWKDAGWGIIV 223
Query: 169 ILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
LA L +S + EAA + GA W R+ + +P L+P I L++R A+ V G IL
Sbjct: 224 FLAALASVSPDLYEAAAMDGANRWRRMWHVTLPALRPVIALLLVLRVGDALTV-GFEQIL 282
Query: 229 AGRD------IPVLAGEGFYQLTEIKDYGVASIYALTIALLSIFL 267
RD VL ++ +D+G A+ L ++S+ L
Sbjct: 283 LQRDAVGPGAAEVLDTFVWWNGVRNQDFGYAAAAGLVKGVISLGL 327
>pir||T46951 probable membrane component of 2-aminoethylphosphonate transporter
phnU [imported] - Salmonella typhimurium
>gi|1763083|gb|AAB39646.1| (U69493) PhnU [Salmonella
typhimurium]
Length = 286
Score = 73.4 bits (177), Expect = 3e-12
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 10 YLLLTPAVVYLLFFIGYPLI--QALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLA 67
+LLL V+ LFF LI QAL A NG L+T R+ + F AL T+ +A
Sbjct: 19 WLLLPLLVLATLFFWPLSLIVEQALRGA---NGEIGLETFRQVVDSKRFVGALLNTLQIA 75
Query: 68 LVIVPVQLILALVLALA-VNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINK 126
L+L V++L V F G +L + + + L + + G +N
Sbjct: 76 FFATAGCLLLGSVMSLILVFIPFPGSELIGRVVDTFIALPTFLITLAFTFIYGSAGLLNG 135
Query: 127 LLLNLGIISSPIHFFGYEYRMMEFL----AIVIAEVWRATAIVFVIILAGLQMISREYLE 182
L++L F +E ++FL +++AE+ T +V ++A L+ I + LE
Sbjct: 136 TLMSL---------FAFELPPVDFLYSMQGVILAEITVFTPLVMRPLMAALRQIDKSQLE 186
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFY 242
AA + GA + +++ P P++ + + L FG+V + + + L +
Sbjct: 187 AASILGAHPLRVIGQVIFPAALPALMAGGSLCLLLTTNEFGIVLFIGAKGVNTLPMMVYS 246
Query: 243 QLTEIKDYGVASIYALTIALLSIFLGALY 271
+ DY VA + AL +LS+ L +LY
Sbjct: 247 KAILESDYTVACMIALINIVLSLGLFSLY 275
>sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|145660|gb|AAA23638.1| (M32101) sulfate permease
[Escherichia coli] >gi|1799842|dbj|BAA16297.1| (D90871)
sulfate/thiosulfate transport protein cysW [Escherichia
coli] >gi|1799852|dbj|BAA16306.1| (D90872)
sulfate/thiosulfate transport protein cysW [Escherichia
coli]
Length = 291
Score = 73.0 bits (176), Expect = 4e-12
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 28/279 (10%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALV 69
+ L+ ++ F + P+I AF+K L V + ++DP A+ T+++AL+
Sbjct: 20 WFLIGIGMLVSAFILLVPMIYIFVQAFSKG----LMPVLQNLADPDMLHAIWLTVMIALI 75
Query: 70 IVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL 128
VPV L+ ++LA V R F G+ L + L IP +S V AGL++ G + L
Sbjct: 76 AVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWL 135
Query: 129 --LNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEV 186
NL I+ + + M + I + + +V V++ G Q EAA +
Sbjct: 136 DEHNLQIM--------FSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQED-----EAAIL 182
Query: 187 FGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQLTE 246
GA W RR+ +P ++ ++ +++ A+ FG V +++G + GE +
Sbjct: 183 LGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGS----IRGETLSLPLQ 238
Query: 247 I----KDYGVASIYALTIALLSIFLGALYVKFLKAEYLE 281
I +DY + L + + L++K + LE
Sbjct: 239 IELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLE 277
>sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE
PROTEIN AMYD >gi|481065|pir||S37704 amyD protein -
Thermoanaerobacterium thermosulfurigenes
>gi|565383|gb|AAB00843.1| (M57692) membrane protein for
maltose transport [Thermoanaerobacterium
thermosulfurigenes] >gi|228282|prf||1802282A sugar
transport protein [Thermoanaerobacterium
thermosulfurigenes]
Length = 292
Score = 73.0 bits (176), Expect = 4e-12
Identities = 50/219 (22%), Positives = 95/219 (42%), Gaps = 11/219 (5%)
Query: 10 YLLLTPAVVYLLFFIGYPLIQALYLAFTK-NGA-----FSLDTVRRAISDPTFWEALKYT 63
+L + P ++ L+ + P I +Y +FT NG L D FW ++ +T
Sbjct: 15 WLFIAPTLLSLIIVVLIPFIIGIYYSFTDWNGINQPVFIGLKNFMTLRDDAEFWNSIIFT 74
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
A+ + + ++ L LA+ V R ++ A +P I + G IW + D
Sbjct: 75 AKFAVACIVIINVVGLSLAMLVTRKIFARNFMRTAFYLPNLIGGLILGFIWNFIFVDVFQ 134
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
++G + + F +VI W+ V VI +A ++ I + +EA
Sbjct: 135 TISDATHIGWLGGWLSTTN-----TGFWGLVIVTSWQMIGYVMVIYIAYIESIPTDLIEA 189
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVF 222
+++ GA W + R +V P++ P+ +L I + ++F
Sbjct: 190 SKIDGANSWQQFRNVVFPLIAPAFTVSLFITLSNSFKLF 228
>pir||H75503 maltose ABC transporter, permease protein - Deinococcus radiodurans
(strain R1) >gi|6458257|gb|AAF10142.1|AE001914_4
(AE001914) maltose ABC transporter, permease protein
[Deinococcus radiodurans]
Length = 468
Score = 73.0 bits (176), Expect = 4e-12
Identities = 53/234 (22%), Positives = 102/234 (42%), Gaps = 21/234 (8%)
Query: 57 WEALKYTILLALVIVPVQLILALVLALAV-NRAFKGKDLTIYALVIPLTISDVAAGLIWY 115
W +T+ A V + + L+L + + N+ KG+++ L +P I V + +W
Sbjct: 229 WPVFVWTVAFAFFTVILNALAGLILGILLYNKRLKGRNIYRTLLFLPWAIPAVISVQMWK 288
Query: 116 TMLS-DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQ 174
+L ++G +NK L LG+ + P + ++I+ +W + ++ L
Sbjct: 289 ALLDQNFGIVNKTLGLLGLFAVP----WLNDPLWAKISILFVNLWLGFPYMMTATISALA 344
Query: 175 MISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP 234
I+ + EAA + GA W ++ I +P+L+ S L+ F FG++++L
Sbjct: 345 TINEDLYEAASIDGASRWQQITNITLPLLRQSFTPILLSTFAFNFNNFGIIYLLTAGGPA 404
Query: 235 VLAGEGFYQLTEI---------------KDYGVASIYALTIALLSIFLGALYVK 273
E Q T+I ++Y +AS AL I L++ + + K
Sbjct: 405 QEGRESTAQSTDILLSWGYNTAFASSGGQNYALASAIALIIFFLTLAISLVNFK 458
>emb|CAC11828.1| (AL445065) probable sugar ABC transporter, permease protein
[Thermoplasma acidophilum]
Length = 311
Score = 73.0 bits (176), Expect = 4e-12
Identities = 56/226 (24%), Positives = 105/226 (45%), Gaps = 12/226 (5%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLD-------TVRRAISDPTFWEALKYT 63
+ + P +++++ F +P I + ++ F D I DP F ++L
Sbjct: 33 IFVIPLMIFVIVFTFFPAIYSFAISLFHYDPFFHDIHFVGFSNYLYVIRDPAFIKSLINV 92
Query: 64 ILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
++ V+V VQ LA AL N A K + + IP +S V+ +I+ + S+ G
Sbjct: 93 LIYTAVVVTVQTFLAFGYALLFNTASKISRVARAIVFIPAVVSPVSMSIIFIWVFSNTGL 152
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N L GI P H + + + F AI+ ++ ++ AGLQ I +E ++A
Sbjct: 153 VNYFLSFFGI---PPHNWLFS-TVYAFPAIMAMNIFTTAPYFMIVYSAGLQAIPQEVMDA 208
Query: 184 AEVFG-AGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
A++ G R R + P+++ S +I+ AMQ+F ++++
Sbjct: 209 AKIDGLKSGLRRFRYVYFPLMRFSTILVVILGLTGAMQLFDQIYVI 254
>pir||T35671 probable transmembrane transport protein - Streptomyces coelicolor
>gi|2661678|emb|CAA15783.1| (AL009199) probable
transmembrane transport protein [Streptomyces coelicolor
A3(2)]
Length = 353
Score = 72.6 bits (175), Expect = 5e-12
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 26/279 (9%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS-------LDTVRRAISDPTFWEALKYTILLA 67
P ++++F + P QA++ T FS D + D F +AL+ LLA
Sbjct: 44 PLAIFVIFVL-IPFGQAIFWGMTDWRGFSPDYNFVGFDNFTKMFQDDIFLKALRNVALLA 102
Query: 68 LVIVPVQLILALVLALAVN---------RAFKGKDLTIYALVIPLTISDVAAGLIWYTML 118
+ V L LAL +A+A+ R +G P + + GLIW M
Sbjct: 103 AFVPLVTLTLALGVAVAITLGGPSKGPVRGIRGASFYRIISFFPYVVPAIIVGLIWAQMY 162
Query: 119 S-DYGFINKLLLNLGIIS-SPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMI 176
+ G +N +L LG+ + G + M + VI VW V+ +A ++ +
Sbjct: 163 DPNAGLLNGVLTGLGLDQFDTFAWLGEKAAAMPAVMFVI--VWGLVGFYAVLFIAAIKGV 220
Query: 177 SREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP-- 234
E EAA++ GAG + I +P ++ S+Q+A I + A+ F V + P
Sbjct: 221 PGELYEAAKIDGAGRFRTTISITLPAIRDSVQTAYIYLGIAALDAFVYVQAMVPNGGPDN 280
Query: 235 ---VLAGEGFYQLTEIKDYGVASIYALTIALLSIFLGAL 270
++ F + +G A+ + +A +++ AL
Sbjct: 281 STLTISQRLFNVAFAKQQFGYATAMGVVLAAVTLVFAAL 319
>gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus solfataricus]
Length = 286
Score = 72.2 bits (174), Expect = 7e-12
Identities = 61/264 (23%), Positives = 119/264 (44%), Gaps = 9/264 (3%)
Query: 9 PYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLAL 68
P + + ++YL+ + L +K L+T I F +L ++I L++
Sbjct: 12 PTAIFSAILLYLVIWNAVMSFMNWSLLNSKPTFVGLETYSIVIRTFQFTNSLLHSIELSV 71
Query: 69 VIVPVQLILALVLA--LAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINK 126
++V + IL + +A L + K + + ++ PL+IS GLIW + + + ++
Sbjct: 72 ILVVIGNILGIFIAALLYFLNSNKARSTFLSIVIYPLSISMAVNGLIWLWLFNIHIGVDW 131
Query: 127 LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEV 186
LL+ +G+ P F ++V+ VW T I + LAG I + +EAA +
Sbjct: 132 LLVRIGLPQFP----WLSSTSTMFPSLVLVSVWAYTGIAALFYLAGFMNIDKTIVEAARL 187
Query: 187 FGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEG---FYQ 243
G + L +I+IP S A + LF+ ++F + ++L+G + Y
Sbjct: 188 DGTSAFKILYKILIPNSLNSFIIATALLFLFSFRIFDLPYVLSGGTTNIFLQTSELYMYY 247
Query: 244 LTEIKDYGVASIYALTIALLSIFL 267
L ++ + A+ A I L++ +
Sbjct: 248 LFTVEYFSQATAVATMITLIATII 271
>emb|CAB88162.1| (AL352956) possible binding-protein-dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 318
Score = 72.2 bits (174), Expect = 7e-12
Identities = 60/273 (21%), Positives = 114/273 (40%), Gaps = 23/273 (8%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALKYTILLAL 68
PA ++ F PLI L+F S D R DP +++ T+LL +
Sbjct: 40 PAALFFALFAIVPLIMVAVLSFMSWDGISSPEFVGTDNWSRLADDPVMLKSIWLTLLLTV 99
Query: 69 VIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL 128
+ V +Q L+++L + + + + IPL +S A ++W +L
Sbjct: 100 LGVVLQTPLSILLGVWAAGHQRNRAVLSVIYFIPLLLSATAVSVLWRALLDP-------- 151
Query: 129 LNLGIISSPIHFFG----YEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
N GI + FG + + + W+ T +I + + + +AA
Sbjct: 152 -NFGIPAEATWLFGDGNLFGEQTTAIGVLAFVSTWQFTPFHTLIYQGAARAVPQVLYQAA 210
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA----GRDIPVLAGEG 240
E+ GAG + + I +P L+ S+ +++I+ + + F V IL G D + A
Sbjct: 211 EIDGAGRYRQFFHITLPQLRTSMITSMILMIVGGLTTFETVLILTQGGPGTDTTISAYYM 270
Query: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
+ + + DYG+ S AL + + + + + V+
Sbjct: 271 YDKAFKSFDYGIGSAIALALVVAATIISLIVVR 303
>pir||E82201 spermidine/putrescine ABC transporter, permease protein VC1427
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655925|gb|AAF94584.1| (AE004221)
spermidine/putrescine ABC transporter, permease protein
[Vibrio cholerae]
Length = 286
Score = 72.2 bits (174), Expect = 7e-12
Identities = 58/270 (21%), Positives = 127/270 (46%), Gaps = 18/270 (6%)
Query: 12 LLTPAVVYLLFFIGYPLIQALYLAFTKNG-------AFSLDTVRRAISDPTFWEALKYTI 64
++T V +L+ F+ P + + +F AF+ + R + DP + + + ++
Sbjct: 12 IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLL-DPLYGKVMLHSF 70
Query: 65 LLALVIVPVQLILALVLALAVNRA-FKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGF 123
+A+V + L++ A V + K + ++ +++P + + +L G
Sbjct: 71 YMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGI 130
Query: 124 INKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEA 183
+N+ L++LG+I +P+ M A++I V+ + + + + ++ + Y+EA
Sbjct: 131 LNQALMSLGLIDAPLRI------MFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEA 184
Query: 184 AEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFYQ 243
A GA + L R+++P+ P I ++ L A+ +F + +L G ++ Q
Sbjct: 185 ARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQ 244
Query: 244 LTEIKD--YGVASIYALTIALLSIFLGALY 271
+ +D +G A+ ALT+A ++I L A Y
Sbjct: 245 VLNARDWPFGAATSIALTLA-MAIMLYAYY 273
>emb|CAB08006.1| (Z94043) hypothetical protein [Bacillus subtilis]
Length = 421
Score = 71.8 bits (173), Expect = 9e-12
Identities = 76/297 (25%), Positives = 138/297 (45%), Gaps = 41/297 (13%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRA----------- 50
+I S+ PY++ P++ L+F + +P++ + LAFT + +
Sbjct: 117 HIISEGYPYVVSGPSLFILIFAVIFPILFSFALAFTNYDLYHSPPAKLIDWVGFQTFANI 176
Query: 51 ----ISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRA---FKGKDLTIYALVIPL 103
I TF++ L +T++ L +Q+ L + LA+ VN+ FK TI L++P
Sbjct: 177 FTVDIWRSTFFDVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTI--LILPW 234
Query: 104 TISDVAAGLIWYTMLSD-YGFINK-LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRA 161
+ LI+ + +D +G +N +L GI P R LA+++ + W
Sbjct: 235 AVPGFVTILIFAGLFNDSFGAMNHDILAFFGIDPLPWMTDANWSR----LALILMQGWLG 290
Query: 162 TAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQV 221
+F++ LQ I + EAA + GA +++LR I +PM+ ++ +I + F
Sbjct: 291 FPYIFLVSTGVLQSIPDDLYEAATIDGASVFSKLRYITLPMVFIAMAPIIITQFTFNFNN 350
Query: 222 FGVVWILAGRDIPVLAG----------EGFYQLT-EIKDYGVASIYALTIALLSIFL 267
F ++++ G P + G Y+LT + Y +A+ ALTI LLS+F+
Sbjct: 351 FNIIYLFNGGG-PAVTGSTAGGTDILVSWIYKLTMQSSQYSLAA--ALTI-LLSVFV 403
>pir||D70038 maltodextrin transport system permease homolog yvfL - Bacillus
subtilis >gi|2635928|emb|CAB15420.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 418
Score = 71.8 bits (173), Expect = 9e-12
Identities = 76/297 (25%), Positives = 138/297 (45%), Gaps = 41/297 (13%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRA----------- 50
+I S+ PY++ P++ L+F + +P++ + LAFT + +
Sbjct: 114 HIISEGYPYVVSGPSLFILIFAVIFPILFSFALAFTNYDLYHSPPAKLIDWVGFQTFANI 173
Query: 51 ----ISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRA---FKGKDLTIYALVIPL 103
I TF++ L +T++ L +Q+ L + LA+ VN+ FK TI L++P
Sbjct: 174 FTVDIWRSTFFDVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTI--LILPW 231
Query: 104 TISDVAAGLIWYTMLSD-YGFINK-LLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRA 161
+ LI+ + +D +G +N +L GI P R LA+++ + W
Sbjct: 232 AVPGFVTILIFAGLFNDSFGAMNHDILAFFGIDPLPWMTDANWSR----LALILMQGWLG 287
Query: 162 TAIVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQV 221
+F++ LQ I + EAA + GA +++LR I +PM+ ++ +I + F
Sbjct: 288 FPYIFLVSTGVLQSIPDDLYEAATIDGASVFSKLRYITLPMVFIAMAPIIITQFTFNFNN 347
Query: 222 FGVVWILAGRDIPVLAG----------EGFYQLT-EIKDYGVASIYALTIALLSIFL 267
F ++++ G P + G Y+LT + Y +A+ ALTI LLS+F+
Sbjct: 348 FNIIYLFNGGG-PAVTGSTAGGTDILVSWIYKLTMQSSQYSLAA--ALTI-LLSVFV 400
>pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii
>gi|3256591|dbj|BAA29274.1| (AP000001) 312aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 312
Score = 71.4 bits (172), Expect = 1e-11
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 34/295 (11%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFT--KN-----------GAFSLDTVRRAIS-DPTFWE 58
L+P ++ + F PL+ +Y++FT +N GA++ + + DP+F
Sbjct: 13 LSPMLLMVALFYLIPLVLTVYISFTGMRNWNVERYLGDFVGAYNYERLFHMFKYDPSF-- 70
Query: 59 ALKYTILLALVIVPVQLILALV--LALAVNRAFKG-KDLTIYALV--IPLTISDVAAGLI 113
K +L +V V + LI+ ++ L LA+ F K TI+ L+ +P L+
Sbjct: 71 --KAVVLTTIVFVMITLIINVLGGLGLALGSFFMSEKPSTIFRLLWLLPRMSPIAVYSLV 128
Query: 114 WYTML--SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILA 171
WY S+ G +N +L+ LG I+ PI + G + I+ + ++ +
Sbjct: 129 WYYFFHGSEIGTLNAILMKLGFINEPIPW-GQIVPWGAWSIIIFVNGLVGVSFGMIVFTS 187
Query: 172 GLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG-----VVW 226
L I +E + AA V GA W +RI++P++K L + L + + V W
Sbjct: 188 ALNQIPKELVIAARVDGASAWQISKRILLPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEW 247
Query: 227 ILAGRDIPVLAGEGFYQLT---EIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
L RD + +D G+A+ A+ +++L I G + +K LK E
Sbjct: 248 DLVNRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIVGGMITLKVLKFE 302
>pir||T30266 suger transport protein protein - Streptomyces lividans
>gi|3342711|gb|AAC46448.1| (U22894) integral membrane
protein [Streptomyces lividans]
Length = 231
Score = 71.4 bits (172), Expect = 1e-11
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 2 NIKSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGA-----FSLDTVRRAISDPTF 56
++K + L AV+ FF YP+++ +LAF K L+ + +DP F
Sbjct: 34 SLKRNLTAHGFLIGAVLCFAFFSWYPMVREFFLAFQKTDQGEVSWVGLENLETVFNDPAF 93
Query: 57 WEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYT 116
W+A + T L ++ + + + V+A+ +N GK + +P+ + VA+ L+ +
Sbjct: 94 WQAWRNTALFTVLALVLGFAVPFVVAIVINELRHGKGYLRLLVYLPVMLPPVASVLL-FK 152
Query: 117 MLSDYGFINKLLLNLGIISSPIHFFGYEYRM------MEFLAIVIAEVWRATAIVFVIIL 170
L D G+ G+++ FFG + + L++VIA W +I L
Sbjct: 153 YLYDPGY--------GMLNEVFGFFGLPEQQWLQDPDLSMLSVVIASTWMNMGGAALIYL 204
Query: 171 AGLQMISREYLEAAE 185
A LQ I E EAA+
Sbjct: 205 AALQGIPGELYEAAD 219
>pir||C75208 sugar transport system permease protein PAB2230 - Pyrococcus abyssi
(strain Orsay) >gi|5457623|emb|CAB49114.1| (AJ248283)
sugar TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 313
Score = 71.4 bits (172), Expect = 1e-11
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 26/291 (8%)
Query: 13 LTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDT--------------VRRAISDPTFWE 58
L+P ++ + F PLI +Y++FT ++++ V DPTF
Sbjct: 14 LSPMIIMVALFYLIPLILTIYISFTGMRNWNVERYLHDFVGTYNYYRLVHMFKYDPTFKA 73
Query: 59 ALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAA-GLIWYTM 117
+ TI+ + + + ++ L LALA + L + +S +A L+WY
Sbjct: 74 VILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYYF 133
Query: 118 L--SDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQM 175
S G +N +L+ LG+I+ PI + G + I+ + ++ + L
Sbjct: 134 FHGSSIGTLNAILMRLGLINQPIPW-GQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192
Query: 176 ISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG-----VVWILAG 230
I +E + AA V GA W RRI+ P++K L + L + + V W L
Sbjct: 193 IPKELVIAARVDGASAWQISRRILFPLMKWHFLYVLTWQFLSLLTTYPHLFLLVEWDLVD 252
Query: 231 RDIPVLAGEGFYQLT---EIKDYGVASIYALTIALLSIFLGALYVKFLKAE 278
RD + +D G+A+ A+ +++L I G + +K LK E
Sbjct: 253 RDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFE 303
>gb|AAC27496.1| (AF077856) PotB [Actinobacillus actinomycetemcomitans]
Length = 286
Score = 70.6 bits (170), Expect = 2e-11
Identities = 55/271 (20%), Positives = 131/271 (48%), Gaps = 17/271 (6%)
Query: 13 LTPAVVY--LLFFIGYPLIQALYLAF-TKNGA------FSLDTVRRAISDPTFWEALKYT 63
+T A+++ L+FF+ P + L ++F T++G+ F+ + + +P + + + +
Sbjct: 11 ITVAIIFSWLIFFVLIPNLLVLVVSFLTRDGSNFYTLPFNFENYIN-LFNPLYAQVVWNS 69
Query: 64 ILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVAAGLIWYTMLSDYG 122
+ ++++ + L++ A V++ K + L ++ +V+P + + L G
Sbjct: 70 LYMSIIAAIICLLIGYPFAFMVSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKVFLGVKG 129
Query: 123 FINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLE 182
+N +LL +GI+S PI E +A++I V+ + + + + ++ + LE
Sbjct: 130 VLNTMLLEMGILSEPIRILNTE------VAVIIGLVYLLLPFMILPLYSAIEKLDGRLLE 183
Query: 183 AAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIPVLAGEGFY 242
AA+ GA + R R+++P+ P I + ++ L AM +F V +L G + ++
Sbjct: 184 AAKDLGANAFQRFFRVILPLTMPGIVAGCLLVLLPAMGMFYVADLLGGAKVLLVGNVIKS 243
Query: 243 QLTEIKDYGVASIYALTIALLSIFLGALYVK 273
+ +++ S ++ + +L L +Y +
Sbjct: 244 EFLISRNWAFGSAISIGLTILMALLIFVYYR 274
>gb|AAC99626.1| (AF043654) BxlF [Streptomyces lividans]
Length = 317
Score = 70.6 bits (170), Expect = 2e-11
Identities = 60/273 (21%), Positives = 113/273 (40%), Gaps = 23/273 (8%)
Query: 15 PAVVYLLFFIGYPLIQALYLAFTKNGAFS------LDTVRRAISDPTFWEALKYTILLAL 68
PA ++ F PLI L+F S D R DP +++ T+LL +
Sbjct: 40 PAALFFALFAIVPLIMVAVLSFMSWDGISSPEFVGTDNWSRLADDPVMLKSIWLTLLLTV 99
Query: 69 VIVPVQLILALVLALAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL 128
+ V +Q L+++L + + + + IPL +S A ++W +L
Sbjct: 100 LGVVLQTPLSILLGVWAAGHQRTRPVLSVIYFIPLLLSATAVSVLWRALLDP-------- 151
Query: 129 LNLGIISSPIHFFG----YEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
N GI + FG + + + W+ T +I + + +AA
Sbjct: 152 -NFGIPAEATWLFGDGNLFGEQTTAIGVLAFVSTWQFTPFHTLIYQGAAAPVPQVLYQAA 210
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILA----GRDIPVLAGEG 240
E+ GAG + + I +P L+ S+ +++I+ + + F V IL G D + A
Sbjct: 211 EIDGAGRYRQFFHITLPQLRTSMITSMILMIVGGLTTFETVLILTQGGPGTDTTISAYYM 270
Query: 241 FYQLTEIKDYGVASIYALTIALLSIFLGALYVK 273
+ + + DYG+ S AL + + + + + V+
Sbjct: 271 YDKAFKSFDYGIGSAIALALVVAATIISLIVVR 303
>gi|7524888 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023606|sp|P56343|CYST_CHLVU PROBABLE SULFATE
TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|7442819|pir||T07318 sulfate transport protein cysT -
Chlorella vulgaris chloroplast
>gi|2224482|dbj|BAA57966.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 266
Score = 70.2 bits (169), Expect = 3e-11
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 20/265 (7%)
Query: 6 KYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTIL 65
+Y ++ + + Y F + P++ L F N V R +DP A T+
Sbjct: 3 RYPTFIKNSILLFYFFFLLILPVVVLFLLIFQNNW----HEVLRKATDPIAVSAYLLTVQ 58
Query: 66 LALVIVPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFI 124
+A V I ++ + R F G++ A+ +P + AGL T+ D G+I
Sbjct: 59 MAFYAALVNSIFGFIITWVLTRYQFWGREFLDAAVDLPFALPTSVAGLTLATVYGDQGWI 118
Query: 125 NKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAA 184
L + FG++ + + +++A ++ + V + LQ + + EAA
Sbjct: 119 GSLF----------NLFGFQIVFTK-IGVLLAMIFVSFPFVIRTLQPVLQEMEKSLEEAA 167
Query: 185 EVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP---VLAGEGF 241
GA W R++++P L P++ + + A+ FG + ++ ++P ++A
Sbjct: 168 WSLGASSWETFRKVILPTLWPALFTGFTLSFSRALGEFGSI-VMISSNLPFKDLVASVLI 226
Query: 242 YQLTEIKDYGVASIYALTIALLSIF 266
YQ E DY AS+ + L+++F
Sbjct: 227 YQSLEQYDYLGASVIGAVVLLIALF 251
>pir||A72786 probable transport system permease protein APE0270 - Aeropyrum
pernix (strain K1) >gi|5103666|dbj|BAA79187.1|
(AP000058) 233aa long hypothetical transport system
permease protein [Aeropyrum pernix]
Length = 233
Score = 70.2 bits (169), Expect = 3e-11
Identities = 67/240 (27%), Positives = 108/240 (44%), Gaps = 26/240 (10%)
Query: 49 RAISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAFKGKDLTIYALV-----IPL 103
R + D E + +++L+L + +LA+ LA A A ++ + L+ + L
Sbjct: 5 RDLIDLFLEERFRRSLVLSLGSSTISSVLAVTLATAPAYAMARQEGRLTRLISQLHLLLL 64
Query: 104 TISDVAAGLIWYTMLSDYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATA 163
+I V G + + Y +N + LG+ SP A+++A++ T
Sbjct: 65 SIPPVGLGTAALILFTRYPPLNSISETLGLFFSP-------------KAVILAQLLVTTP 111
Query: 164 IVFVIILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFG 223
I ++ M+ RE EAAE +GAG L RIV+P+ P I SAL + A+ FG
Sbjct: 112 IAVSMLTGVFSMVPRELEEAAEAYGAGRLQILIRIVLPLSLPGILSALAVTFFRALGEFG 171
Query: 224 VVWILAGRDIPVLAGE---GFYQLTEIKDYGVAS-IYALTIALLSIFLGA---LYVKFLK 276
+LAG +IP Y + D AS IY L +A+ + LG LY + +K
Sbjct: 172 ATLVLAG-NIPGRTETLPLALYNAISLADVETASAIYTLVLAVGLVTLGVHTLLYTRLVK 230
>gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|CYST_MARPO
PROBABLE SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|81344|pir||A05062 probable mbpY protein - liverwort
(Marchantia polymorpha) chloroplast
>gi|11721|emb|CAA28132.1| (X04465) ORF288 [Marchantia
polymorpha]
Length = 288
Score = 69.5 bits (167), Expect = 5e-11
Identities = 67/260 (25%), Positives = 116/260 (43%), Gaps = 24/260 (9%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVI 70
L+L A+ Y F + P+ LY TK +++ + + +P A +T L AL+
Sbjct: 28 LVLACALHYGTFILALPIFFLLYK--TKQQPWNI--LLQTALEPVVLSAYGFTFLTALLA 83
Query: 71 VPVQLILALVLA-LAVNRAFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLL- 128
+ I L+LA + V F GK L + +P + GL T+ +D G+I +
Sbjct: 84 TIINAIFGLILAWVLVRYEFPGKKLLDATVDLPFALPTSVGGLTLMTVFNDKGWIKPICS 143
Query: 129 -LNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVF 187
LN+ I+ +PI +++A ++ + V I LQ + + EAA
Sbjct: 144 WLNIKIVFNPI-------------GVLLAMIFVSLPFVVRTIQPVLQNMEEDLEEAAWCL 190
Query: 188 GAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAGRDIP---VLAGEGFYQL 244
GA WT I+ P L PS+ + + A+ +G + +L +IP ++ +Q
Sbjct: 191 GASPWTTFWHILFPPLTPSLLTGTTLGFSRALGEYGSI-VLIASNIPMKDLVISVLLFQK 249
Query: 245 TEIKDYGVASIYALTIALLS 264
E DY A+I A + ++S
Sbjct: 250 LEQYDYKSATIIASFVLIIS 269
>emb|CAB51940.1| (AJ132472) Putative ABC-type Sugar Transporter [Ruminococcus
flavefaciens]
Length = 330
Score = 69.1 bits (166), Expect = 6e-11
Identities = 61/238 (25%), Positives = 108/238 (44%), Gaps = 18/238 (7%)
Query: 5 SKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFTK----NGAFS-------LDTVRRAISD 53
SKY YL P +V L F YP I L FT NG + + + + +
Sbjct: 11 SKY-GYLFSIPFIVAFLIFTLYPTIYTATLGFTDCKGVNGPENYHFLDKPFENFKSILEN 69
Query: 54 PTFWEALKYTILLALVIVPVQLILALVLAL---AVNRAFKGKDLTIYALVIPLTISDVAA 110
TF +LK TIL+ ++ Q+ +AL+L + + +GK +P I+
Sbjct: 70 DTFRISLKNTILIWIMNFIPQISIALLLTAWFTSHSNEIRGKGFFKVVFYMPNIITAATV 129
Query: 111 GLIWYTMLS-DYGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVII 169
++++T+ + G +N L + G+ SP +FF + +A + + W +++
Sbjct: 130 AILFHTLFNYPIGPVNDFLESTGLRESPYYFFTSKTACRIIVAFI--QFWTWYGNTMIVL 187
Query: 170 LAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWI 227
++G+ IS + EAAE+ GA RI IP LK + LI + + +F + ++
Sbjct: 188 ISGVLGISPDIYEAAEIDGANGVQTFFRITIPNLKTVLLYTLITSLVGGLNMFDIPFL 245
>pir||A83610 sulfate transport protein CysW PA0281 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946124|gb|AAG03670.1|AE004466_4 (AE004466) sulfate
transport protein CysW [Pseudomonas aeruginosa]
Length = 289
Score = 69.1 bits (166), Expect = 6e-11
Identities = 62/263 (23%), Positives = 117/263 (43%), Gaps = 26/263 (9%)
Query: 11 LLLTPAVVYLLFFIGYPLIQALYLAFTKNGAFSLDTVRRAISDPTFWEALKYTILLALVI 70
L++ +V+ LF L+ LY+ ++ T AI +P ALK T++ +
Sbjct: 25 LIVLAWLVFALF-----LLLPLYVVLSEALKQGFGTFFEAILEPDALAALKLTLIAVAIS 79
Query: 71 VPVQLILALVLALAVNR-AFKGKDLTIYALVIPLTISDVAAGLIWYTMLSDYGFINKLLL 129
VP+ L+ + A V++ F+GK + + + +P ++S V AGLI+ + G+ + L
Sbjct: 80 VPLNLLFGVAAAWCVSKFEFRGKSILVTLIDLPFSVSPVIAGLIYVLLFGAQGYFGEWLS 139
Query: 130 NLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVIILAGLQMISREYLEAAEVFGA 189
+ I + IV+A ++ V ++ +Q + EAA + GA
Sbjct: 140 DHDI-----------QIVFAVPGIVLATLFVTVPFVARELIPLMQEQGTQEEEAARLLGA 188
Query: 190 GYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWILAG------RDIPVLAGEGFYQ 243
W + +P +K + +++ T AM FG V +++G +P+ + +
Sbjct: 189 NGWQMFWHVTLPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNE 248
Query: 244 LTEIKDYGVAS---IYALTIALL 263
+ + VAS + AL I LL
Sbjct: 249 YNHVAAFSVASLLLLMALVILLL 271
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.331 0.146 0.429
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93559320
Number of Sequences: 2977
Number of extensions: 3529285
Number of successful extensions: 12225
Number of sequences better than 1.0e-10: 141
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 11957
Number of HSP's gapped (non-prelim): 151
length of query: 284
length of database: 189,106,746
effective HSP length: 52
effective length of query: 232
effective length of database: 157,985,422
effective search space: 36652617904
effective search space used: 36652617904
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.9 bits)
S2: 165 (68.7 bits)