BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2356 (asnS-like) DE:asparaginyl-tRNA synthetase related
protein
(294 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75215 asparaginyl-tRNA synthetase related protein PAB2356 ... 604 e-172
pir||G71451 asparagine--tRNA ligase (EC 6.1.1.22) - Pyrococcus h... 521 e-147
emb|CAC11748.1| (AL445064) asparagine--tRNA ligase related prote... 216 2e-55
emb|CAC11659.1| (AL445064) probable asparaginyl--tRNA synthetase... 111 1e-23
pir||D75212 asparagine--tRNA ligase (EC 6.1.1.22) PAB2203 - Pyro... 105 8e-22
pir||B71248 asparagine--tRNA ligase (EC 6.1.1.22) - Pyrococcus h... 102 7e-21
sp|P54263|SYN_THETH ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 94 3e-18
sp|Q58950|SYD_METJA ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 90 2e-17
pir||S71074 asparagine--tRNA ligase (EC 6.1.1.22) asnS2 - Lactob... 90 3e-17
sp|P54262|SYN_LACDE ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 90 4e-17
pir||S71072 asparagine--tRNA ligase (EC 6.1.1.22) asnS1 - Lactob... 90 4e-17
gi|11498525 aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgi... 88 1e-16
sp|P39772|SYN_BACSU ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 86 4e-16
sp|P47359|SYN_MYCGE ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 84 2e-15
sp|O07683|SYD_HALSA ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 84 2e-15
gb|AAF61689.1| (AF219996) aspartyl-tRNA synthetase 2 [Thermus th... 82 1e-14
sp|P75521|SYN_MYCPN ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 81 2e-14
sp|O26328|SYD_METTH ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 81 2e-14
pir||C72527 probable aspartyl-tRNA synthetase APE2192 - Aeropyru... 80 2e-14
sp|Q9Y9U7|SYD_AERPE ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 80 2e-14
pir||E82217 asparaginyl-tRNA synthetase VC1297 [imported] - Vibr... 80 2e-14
dbj|BAB05415.1| (AP001512) asparaginyl-tRNA synthetase [Bacillus... 80 3e-14
sp|O51128|SYN_BORBU ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 79 6e-14
gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfa... 79 7e-14
sp|O24822|SYD_HALVO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 76 5e-13
pir||A75071 aspartyl-tRNA synthetase (asps) PAB0646 - Pyrococcus... 75 8e-13
sp|O58776|SYD_PYRHO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 75 1e-12
sp|O83618|SYN_TREPA ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRN... 73 3e-12
sp|Q52428|SYD_PYRKO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LI... 73 4e-12
pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase >gi|4388837|pdb|1B8... 73 4e-12
pir||S77842 probable asparagine--tRNA ligase (EC 6.1.1.22) - Myc... 72 9e-12
emb|CAC12075.1| (AL445066) aspartyl-tRNA synthetase related prot... 69 5e-11
>pir||C75215 asparaginyl-tRNA synthetase related protein PAB2356 - Pyrococcus
abyssi (strain Orsay) >gi|5457679|emb|CAB49170.1|
(AJ248283) asparaginyl-tRNA synthetase related protein
[Pyrococcus abyssi]
Length = 294
Score = 604 bits (1541), Expect = e-172
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MNAVEIISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRP 60
MNAVEIISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRP
Sbjct: 1 MNAVEIISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRP 60
Query: 61 AEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFE 120
AEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFE
Sbjct: 61 AEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFE 120
Query: 121 IEGAKMKDVMRLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEM 180
IEGAKMKDVMRLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEM
Sbjct: 121 IEGAKMKDVMRLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEM 180
Query: 181 EEPFWIVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKE 240
EEPFWIVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKE
Sbjct: 181 EEPFWIVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKE 240
Query: 241 DSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPGIPAVI 294
DSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPGIPAVI
Sbjct: 241 DSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPGIPAVI 294
>pir||G71451 asparagine--tRNA ligase (EC 6.1.1.22) - Pyrococcus horikoshii
>gi|3256659|dbj|BAA29342.1| (AP000001) 294aa long
hypothetical asparaginyl-tRNA synthetase [Pyrococcus
horikoshii]
Length = 294
Score = 521 bits (1327), Expect = e-147
Identities = 236/294 (80%), Positives = 276/294 (93%)
Query: 1 MNAVEIISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRP 60
M+ ++IISRDIYK IDIQT+ILDYMTK+F +GFKWLLP+MLSPITDPLWPDPA EG++P
Sbjct: 1 MSVIKIISRDIYKVIDIQTRILDYMTKYFLGKGFKWLLPVMLSPITDPLWPDPAEEGVKP 60
Query: 61 AEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFE 120
EV+VYG +MRLTHSMILHKQLAIAMGL+KIFVLSPNIR+E+R +DDG+H+YEFTQ DFE
Sbjct: 61 LEVEVYGKKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRIETRERDDGKHAYEFTQFDFE 120
Query: 121 IEGAKMKDVMRLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEM 180
+EGAKMKD++ L+EEL++GLFRKAEEWTGR+FP+ARHFKVY+YKDIL+EFGSDEKAS M
Sbjct: 121 VEGAKMKDIISLVEELMHGLFRKAEEWTGRDFPKARHFKVYEYKDILDEFGSDEKASQVM 180
Query: 181 EEPFWIVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKE 240
EEPFW++NIPREFYDREE+GVW+NYDLILPYGYGEV SGGEREWEY+KI+ KIRA+GL E
Sbjct: 181 EEPFWVINIPREFYDREEDGVWRNYDLILPYGYGEVLSGGEREWEYQKIIEKIRASGLSE 240
Query: 241 DSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPGIPAVI 294
+SF+PYLEIARAGKLKPSAGAGIGVERLVRFIV A H++EVQ FPR+PGIPA+I
Sbjct: 241 ESFKPYLEIARAGKLKPSAGAGIGVERLVRFIVSAHHVSEVQLFPRIPGIPAMI 294
>emb|CAC11748.1| (AL445064) asparagine--tRNA ligase related protein [Thermoplasma
acidophilum]
Length = 329
Score = 216 bits (545), Expect = 2e-55
Identities = 125/297 (42%), Positives = 180/297 (60%), Gaps = 24/297 (8%)
Query: 10 DIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVR 69
++Y A+ +Q+ I ++F +RGF + P+++S +TDPL + +D YG +
Sbjct: 36 ELYHALKVQSSIRSITSEFLKERGFIEVPPVIISVLTDPL-----NHPVFDPTIDYYGYK 90
Query: 70 MRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRK-DDGRHSYEFTQLDFEIEGAKMKD 128
LT SMI HK L + ++IF SPNIRLE K GRH EFTQLD E++GA +
Sbjct: 91 YSLTKSMIFHKHL-LTKHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDE 149
Query: 129 VMRLIEELIYGLFRKAE-------EWTGREFP-RARHFKVYDYKDILEEFGSDEK--ASM 178
VM L E++I LF+K + ++ GR+ ++ FK Y D +++G D + S
Sbjct: 150 VMSLGEDMIIDLFKKIKRSNEEDLKFFGRDLRIPSKPFKRIAYLDAYKQYGEDFEHILSS 209
Query: 179 EMEEPFWIVNIP---REFYDREEN---GVWKNYDLILPYGYGEVSSGGEREWEYEKIVAK 232
EM+EPFWI++IP REFYDRE+ G+ + DLI P G+GE SGGERE+E +I+ +
Sbjct: 210 EMKEPFWIIDIPLEKREFYDREDPSRPGILVDMDLIYPEGFGEALSGGEREYELSRIIDR 269
Query: 233 IRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRVPG 289
I G E+ F+ Y+E A+ G L PSAG GIG+ERL RFI G + I + PFP++PG
Sbjct: 270 IHRKGQTEEQFKWYIEFAKEG-LMPSAGFGIGIERLTRFICGLERIEDAHPFPKIPG 325
>emb|CAC11659.1| (AL445064) probable asparaginyl--tRNA synthetase [Thermoplasma
acidophilum]
Length = 429
Score = 111 bits (275), Expect = 1e-23
Identities = 81/312 (25%), Positives = 149/312 (46%), Gaps = 45/312 (14%)
Query: 8 SRDIYKAIDIQTKILDYMTKFFTDRGFKWL-LPIMLSPITDPLWPDPAGEGIRPAEVDVY 66
SR+ + I++ I FF + G+ + P M+S + G +VD +
Sbjct: 123 SREFTSVLKIRSTIFRSFADFFYENGYYQVQTPFMVSTAVEG--------GSTLFKVDFF 174
Query: 67 GVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM 126
G + L S + + I LEK+F ++P+ R E R RH E+ + E+
Sbjct: 175 GEPIYLNQSAQFYLETMI-YSLEKVFTIAPSFRAEKSRTR--RHLTEYWHAEAEVAWIDN 231
Query: 127 KDVMRLIEELIYGLFRKAEEWTGRE-----------------FPRARHFKVYDYKDIL-- 167
++M + E +IY + + E E FPR R+ ++ + +
Sbjct: 232 NEMMDIEERMIYYIVSRVTEDNEDELKMLNRDPEVLKAMKPPFPRIRYSEIIKVANSIGL 291
Query: 168 -----EEFGSDEKA--SMEMEEPFWIVNIPRE---FY---DREENGVWKNYDLILPYGYG 214
++ G+DE+ +M+ + P ++ N P++ FY D E G N+D++ P GYG
Sbjct: 292 PLKYGDDLGADEERQITMKYDRPIFVTNYPKDLKPFYMPVDPENPGEVLNHDMLAPEGYG 351
Query: 215 EVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVG 274
E+ G +R W Y++++ +IR A L E ++ Y+++ + G + P +G G+G++RL +I+
Sbjct: 352 EIIGGSQRIWNYDELMQRIREANLDESAYYWYVDLRKYGSV-PHSGFGLGLDRLAMWIMH 410
Query: 275 AKHIAEVQPFPR 286
+I E P+PR
Sbjct: 411 LDNIREAIPYPR 422
>pir||D75212 asparagine--tRNA ligase (EC 6.1.1.22) PAB2203 - Pyrococcus abyssi
(strain Orsay) >gi|5457656|emb|CAB49147.1| (AJ248283)
ASPARAGINYL-TRNA SYNTHETASE (EC 6.1.1.22)
(ASPARAGINE--TRNA LIGASE) (ASNRS) [Pyrococcus abyssi]
Length = 434
Score = 105 bits (259), Expect = 8e-22
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 36/249 (14%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMR 131
L+ S L+ + AI GLEK++ L+P+ R E R RH EF L+ E + D+M+
Sbjct: 185 LSQSAQLYLEAAI-FGLEKVWSLTPSFRAEKSRTR--RHLTEFWHLELEAAWMDLWDIMK 241
Query: 132 LIEELIYGLFRKAEEWTGRE-----------------FPRARH---FKVYDYKDILEEFG 171
+ EEL+ + ++ E +E FPR + ++ K + E+G
Sbjct: 242 VEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIEILQSKGVKIEWG 301
Query: 172 SDEKA------SMEMEEPFWIVNIPRE---FYDREENGVWKNY---DLILPYGYGEVSSG 219
D A + E + PF++ P+ FY +E+ + D++ P GYGE+ G
Sbjct: 302 DDMGADEERVLTQEFDRPFFVYGYPKHIKAFYMKEDPNDPRKVLAADMLAPEGYGEIIGG 361
Query: 220 GEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIA 279
ERE Y+K+V +I+ G+ + YL++ + G + P +G G+GVERLV +++ HI
Sbjct: 362 SEREDNYDKLVQRIKEEGMDPKDYEWYLDLRKYGSV-PHSGFGLGVERLVAWVLKLDHIR 420
Query: 280 EVQPFPRVP 288
FPR P
Sbjct: 421 WATLFPRTP 429
>pir||B71248 asparagine--tRNA ligase (EC 6.1.1.22) - Pyrococcus horikoshii
>gi|3256630|dbj|BAA29313.1| (AP000001) 434aa long
hypothetical asparaginyl-tRNA synthetase [Pyrococcus
horikoshii]
Length = 434
Score = 102 bits (251), Expect = 7e-21
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 36/249 (14%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMR 131
L+ S L+ + AI GLEK++ L+P+ R E R RH EF L+ E + D+M+
Sbjct: 185 LSQSAQLYLEAAI-FGLEKVWSLTPSFRAEKSRTR--RHLTEFWHLELEAAWMDLWDIMK 241
Query: 132 LIEELIYGLFRKAEEWTGRE-----------------FPRARHFKVYDY---KDILEEFG 171
+ EEL+ + ++ E +E FPR + + D K + E+G
Sbjct: 242 VEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIDILQSKGVNVEWG 301
Query: 172 SDEKA------SMEMEEPFWIVNIPRE---FYDREENGVWKNY---DLILPYGYGEVSSG 219
D A + E + PF++ P+ FY +E+ + D++ P GYGE+ G
Sbjct: 302 DDLGADEERVLTEEFDRPFFVYGYPKHIKAFYMKEDPNDPRKVLASDMLAPEGYGEIIGG 361
Query: 220 GEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIA 279
+RE +Y+K++ +I G+ + YL++ R G + P +G G+GVERLV +++ HI
Sbjct: 362 SQREDDYDKLLNRILEEGMDPKDYEWYLDLRRYGSV-PHSGFGLGVERLVAWVLKLDHIR 420
Query: 280 EVQPFPRVP 288
FPR P
Sbjct: 421 WAALFPRTP 429
>sp|P54263|SYN_THETH ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|1004327|emb|CAA62491.1| (X91009) asparaginyl-tRNA
synthetase [Thermus thermophilus]
Length = 438
Score = 93.6 bits (229), Expect = 3e-18
Identities = 87/302 (28%), Positives = 140/302 (45%), Gaps = 53/302 (17%)
Query: 27 KFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPA-EVDVY-GVRMRLTHSMILHKQLAI 84
+FF +RGF +L+P A EG EV+++ G + L+ S L+ + A
Sbjct: 143 EFFGERGFLRFDAPILTP--------SAVEGTTELFEVELFDGEKAYLSQSGQLYAE-AG 193
Query: 85 AMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMRLIEELIYGLFRKA 144
A+ K++ P R E R RH EF ++ E+ ++ M L EEL+ L +
Sbjct: 194 ALAFAKVYTFGPTFRAE--RSKTRRHLLEFWMVEPEVAFMTHEENMALQEELVSFLVARV 251
Query: 145 EEWTGREF------PRAR------HFKVYDYKDIL-------------------EEFGSD 173
E RE P+A H+ YK+ + E+FG+
Sbjct: 252 LERRSRELEMLGRDPKALEPAAEGHYPRLTYKEAVALVNRIAQEDPEVPPLPYGEDFGAP 311
Query: 174 EKASME--MEEPFWIVNIP---REFY---DREENGVWKNYDLILPYGYGEVSSGGEREWE 225
+A++ + P ++ P + FY D E+ + N DL+ P GYGE+ G +R +
Sbjct: 312 HEAALSRRFDRPVFVERYPARIKAFYMEPDPEDPELVLNDDLLRPEGYGEIIGGSQRIHD 371
Query: 226 YEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFP 285
E + KI+ GL E+ + YL++ R G + P +G G+G+ER V +I G H+ E PFP
Sbjct: 372 LELLRRKIQEFGLPEEVYDWYLDLRRFGSV-PHSGFGLGLERTVAWICGLAHVREAIPFP 430
Query: 286 RV 287
R+
Sbjct: 431 RM 432
>sp|Q58950|SYD_METJA ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|2127776|pir||B64494 aspartate--tRNA ligase (EC
6.1.1.12) - Methanococcus jannaschii
>gi|1592183|gb|AAB99575.1| (U67596) aspartyl-tRNA
synthetase (aspS) [Methanococcus jannaschii]
Length = 438
Score = 90.5 bits (221), Expect = 2e-17
Identities = 78/244 (31%), Positives = 118/244 (47%), Gaps = 34/244 (13%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMR 131
L S L+KQ+ +A GL+++F ++P R E + RH E T +D E+ A KD M
Sbjct: 193 LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEH--NTRRHLNEATSIDIEMAFADDKDAMD 250
Query: 132 LIEELIYGLF------RKAE--------EWTGREFPRARHFKVYDY---KDILEEFGSD- 173
++E+++Y F RK E E +F R + + D K + +G D
Sbjct: 251 ILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAIDIANAKGVEISWGEDL 310
Query: 174 ----EKA-SMEMEEPFWIVNIPRE---FY---DREENGVWKNYDLILPYGYGEVSSGGER 222
EKA EME ++I + P E FY D + + K +DL+ Y E+SSG +R
Sbjct: 311 SREAEKAIGEEMEGLYFITDWPSEIRPFYTMPDEKNPNICKAFDLM--YKDLEISSGAQR 368
Query: 223 EWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQ 282
Y+ +V I+ GL D F YLE + G + P AG G+G +R + ++I E
Sbjct: 369 IHLYDLLVENIKKKGLNPDGFTYYLEAFKYG-MPPHAGWGLGADRFTMVLTQQENIRECV 427
Query: 283 PFPR 286
FPR
Sbjct: 428 LFPR 431
>pir||S71074 asparagine--tRNA ligase (EC 6.1.1.22) asnS2 - Lactobacillus
delbrueckii subsp. bulgaricus
>gi|1495654|emb|CAA61604.1| (X89439) asparagine--tRNA
ligase [Lactobacillus delbrueckii]
Length = 432
Score = 90.1 bits (220), Expect = 3e-17
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 8 SRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPA-EVDVY 66
SR + + I+ +I FF + GF PL A EG +D +
Sbjct: 125 SRRPFAIMQIRNRIFKATVDFFENEGFV--------KFDAPLLMHSAPEGTTELFHIDYF 176
Query: 67 GVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM 126
L+ S L+ ++ A KIF P R E+ + RH EF ++ E+
Sbjct: 177 NHDAYLSQSGQLYGEVG-AEAFGKIFTFGPTFRAEASKTR--RHLTEFWMMEPEMAWMHQ 233
Query: 127 KDVMRLIEELIYGLFRKAEEWT-------GREFPRAR-----HFKVYDYKDIL------- 167
+ + L E + + + E GR+ + R ++ Y D +
Sbjct: 234 DESLDLQERFLSYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVKMLQEAG 293
Query: 168 ------EEFGSDEKA--SMEMEEPFWIVNIP---REFYDREENGVWKNY---DLILPYGY 213
++FG+ ++A S + + PF+IVN P + FY ++ Y D+ P GY
Sbjct: 294 KDFKWGDDFGAPDEAFLSEQFDRPFFIVNYPVAIKPFYMKKNPENPLTYLCADVEAPEGY 353
Query: 214 GEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIV 273
GE+ G ERE +Y+ + A+I AGL D + YL++ + G + P +G G+G ER++ +I
Sbjct: 354 GEIMGGSEREADYDTLKAQIEEAGLNLDDYSWYLDLRKYGSV-PHSGFGMGFERVIAWIC 412
Query: 274 GAKHIAEVQPFPRV 287
H+ E PFPR+
Sbjct: 413 KLDHVREAVPFPRM 426
>sp|P54262|SYN_LACDE ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|2145612|pir||S73326 asparagine--tRNA ligase (EC
6.1.1.22) asnS1 - Lactobacillus delbrueckii
>gi|1321875|emb|CAA61603.1| (X89438) asparagine--tRNA
ligase [Lactobacillus delbrueckii]
Length = 432
Score = 89.7 bits (219), Expect = 4e-17
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 8 SRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPA-EVDVY 66
SR + + I+ +I FF + GF PL A EG +D +
Sbjct: 125 SRRPFAIMQIRNRIFKATVDFFENEGFV--------KFDAPLLMHSAPEGTTELFHIDYF 176
Query: 67 GVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM 126
L+ S L+ ++ A KIF P R E+ + RH EF ++ E+
Sbjct: 177 NHDAYLSQSGQLYGEVG-AEAFGKIFTFGPTFRAEASKTR--RHLTEFWMMEPEMAWMHQ 233
Query: 127 KDVMRLIEELIYGLFRKAEEWT-------GREFPRAR-----HFKVYDYKDIL------- 167
+ + L E + + + E GR+ + R ++ Y D +
Sbjct: 234 DESLDLQERFLSYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVKMLQEAG 293
Query: 168 ------EEFGSDEKA--SMEMEEPFWIVNIP---REFYDREENGVWKNY---DLILPYGY 213
++FG+ ++A S + + PF+IVN P + FY ++ Y D+ P GY
Sbjct: 294 KDFKWGDDFGAPDEAFLSEQFDRPFFIVNYPVAIKPFYMKKNPENPLTYLCADVEAPEGY 353
Query: 214 GEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIV 273
GE+ G ERE +Y+ + A+I AGL D + YL++ + G + P +G G+G ER++ +I
Sbjct: 354 GEIMGGSEREADYDTLKAQIEEAGLNLDDYSWYLDLRKYGSV-PHSGFGMGFERVIAWIC 412
Query: 274 GAKHIAEVQPFPRV 287
H+ E PFPR+
Sbjct: 413 KLDHVREAVPFPRM 426
>pir||S71072 asparagine--tRNA ligase (EC 6.1.1.22) asnS1 - Lactobacillus
delbrueckii subsp. bulgaricus
Length = 432
Score = 89.7 bits (219), Expect = 4e-17
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 8 SRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPA-EVDVY 66
SR + + I+ +I FF + GF PL A EG +D +
Sbjct: 125 SRRPFAIMQIRNRIFKATVDFFENEGFV--------KFDAPLLMHSAPEGTTELFHIDYF 176
Query: 67 GVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM 126
L+ S L+ ++ A KIF P R E+ + RH EF ++ E+
Sbjct: 177 NHDAYLSQSGQLYGEVG-AEAFGKIFTFGPTFRAEASKTR--RHLTEFWMMEPEMAWMHQ 233
Query: 127 KDVMRLIEELIYGLFRKAEEWT-------GREFPRAR-----HFKVYDYKDIL------- 167
+ + L E + + + E GR+ + R ++ Y D +
Sbjct: 234 DESLDLQERFLSYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVKMLQEAG 293
Query: 168 ------EEFGSDEKA--SMEMEEPFWIVNIP---REFYDREENGVWKNY---DLILPYGY 213
++FG+ ++A S + + PF+IVN P + FY ++ Y D+ P GY
Sbjct: 294 KDFKWGDDFGAPDEAFLSEQFDRPFFIVNYPVAIKPFYMKKNPENPLTYLCADVEAPEGY 353
Query: 214 GEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIV 273
GE+ G ERE +Y+ + A+I AGL D + YL++ + G + P +G G+G ER++ +I
Sbjct: 354 GEIMGGSEREADYDTLKAQIEEAGLNLDDYSWYLDLRKYGSV-PHSGFGMGFERVIAWIC 412
Query: 274 GAKHIAEVQPFPRV 287
H+ E PFPR+
Sbjct: 413 KLDHVREAVPFPRM 426
>gi|11498525 aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus]
>gi|3122883|sp|O29342|SYD_ARCFU ASPARTYL-TRNA SYNTHETASE
(ASPARTATE--TRNA LIGASE) (ASPRS) >gi|7437591|pir||H69364
aspartyl-tRNA synthetase (aspS) homolog - Archaeoglobus
fulgidus >gi|2649677|gb|AAB90318.1| (AE001040)
aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus]
Length = 430
Score = 88.2 bits (215), Expect = 1e-16
Identities = 87/304 (28%), Positives = 143/304 (46%), Gaps = 51/304 (16%)
Query: 17 IQTKILDYMTKFFTDRGFKWL-LPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRMRLTHS 75
I+ +++ + +F ++ GF + P ++S T+ G + P + + L S
Sbjct: 137 IRHQVMQSVREFLSEEGFIEVHTPKIVSTATE------GGTELFP--ISYFEKEAFLNQS 188
Query: 76 MILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMRLIEE 135
L+KQ+ +A G EK+F + P R E RH E +D E+ VM ++E
Sbjct: 189 PQLYKQVLMAAGFEKVFEIGPIFRAEEHNTT--RHLNEAISIDIEMSFTDHNGVMDVLER 246
Query: 136 LIYGLFR----KAEEWTG----------REFPR-----ARHFKVYDYKDILEEFGSDEKA 176
L+ ++ K E + G FPR AR ++I +G D
Sbjct: 247 LVQRVYEDVAEKCERYLGWLEVSLEIPELPFPRITYDEAREIAARKGEEI--PWGEDLST 304
Query: 177 SM------EMEEPFWIVNIPRE---FY-----DREENGVWKNYDLILPYGYGEVSSGGER 222
+ EM ++I + P E FY DR E + K++DL+ +G+ E+SSG +R
Sbjct: 305 NALKLVGEEMGGLYFITDWPTESKPFYAMPYEDRPE--ISKSFDLM--HGWLELSSGAQR 360
Query: 223 EWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQ 282
Y+ +V I+A G++ +SF YLE R G + P AG G+G ERL+ ++G K++ E
Sbjct: 361 IHLYDMLVESIKAKGMEPESFGFYLEAFRYG-MPPHAGWGLGAERLIMSMLGLKNVREAV 419
Query: 283 PFPR 286
FPR
Sbjct: 420 LFPR 423
>sp|P39772|SYN_BACSU ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|7437578|pir||B69591 asparagine--tRNA ligase (EC
6.1.1.22) asnS - Bacillus subtilis
>gi|1146247|gb|AAB38455.1| (L47709) asparaginyl-tRNA
synthetase [Bacillus subtilis]
>gi|2634654|emb|CAB14152.1| (Z99115) asparaginyl-tRNA
synthetase [Bacillus subtilis]
Length = 430
Score = 86.2 bits (210), Expect = 4e-16
Identities = 88/317 (27%), Positives = 150/317 (46%), Gaps = 52/317 (16%)
Query: 8 SRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGE--GIRPAEVDV 65
S+ + + I+ +I+ +FF + GF + P PI P+ E + + D
Sbjct: 123 SKRQHAIMKIRNEIIRATYEFFNNEGFVKVDP----PILTGSAPEGTTELFATKYFDEDA 178
Query: 66 YGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK 125
Y L+ S L+ + A AM L K+F P R E + RH EF ++ E+ +
Sbjct: 179 Y-----LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTK--RHLIEFWMIEPEMAFVE 230
Query: 126 MKDVMRLIEELIYGLFR------KAEEWT-GRE----------FPRARH------FKVYD 162
++ +++ E + + + K E T GR+ FPR + K
Sbjct: 231 FEENLQVQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAIEFLKEKG 290
Query: 163 YKDIL--EEFGSDEKASM--EMEEPFWIVNIP---REFY-----DREENGVWKNYDLILP 210
+ DI ++FG+ + ++ ++P +I P + FY DRE+ V DLI P
Sbjct: 291 FDDIEWGDDFGAPHETAIAEHYDKPVFITRYPTSLKPFYMQPASDRED--VVLCADLIAP 348
Query: 211 YGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVR 270
GYGE+ G ER + E + ++++ GL D+++ Y E+ + G + P +G G+G+ER V
Sbjct: 349 EGYGEIIGGSERIHDMELLESRLKEHGLDSDAYKWYAELRKYGSV-PHSGFGLGLERTVA 407
Query: 271 FIVGAKHIAEVQPFPRV 287
+I GA H+ E PFPR+
Sbjct: 408 WISGAPHVRETIPFPRL 424
>sp|P47359|SYN_MYCGE ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|1361447|pir||E64212 asparagine--tRNA ligase (EC
6.1.1.22) - Mycoplasma genitalium
>gi|3844702|gb|AAC71331.1| (U39691) asparaginyl-tRNA
synthetase (asnS) [Mycoplasma genitalium]
Length = 456
Score = 84.3 bits (205), Expect = 2e-15
Identities = 69/256 (26%), Positives = 111/256 (42%), Gaps = 53/256 (20%)
Query: 83 AIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMRLIEELIYGLFR 142
A A +K+F P R E + RH EF ++ EI A +KD+M+LI+ LI L +
Sbjct: 201 AFAQAFKKVFTFGPTFRAE--KSHTNRHLSEFWMIEPEIAFANLKDLMQLIQNLIKFLIK 258
Query: 143 KAEEWTGREFP------------------RARHFKVYDYKD---ILEEFGSDEKASMEM- 180
K E E + F + +Y IL+E +K + E+
Sbjct: 259 KVMENASDELNVLAKQFSNDIISNLKTIISTKKFPIIEYSKALAILKESSDTKKTNFELN 318
Query: 181 ----------------------EEPFWIVNIPRE---FY--DREENGVWKNYDLILPYGY 213
+P +++N P+E FY +N DL+LP
Sbjct: 319 DFSFGIDLKTEHERFLCEQYFQNQPLFVINYPKELKAFYMKTNTDNKTVAAVDLLLP-KI 377
Query: 214 GEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIV 273
GE+ G ERE + ++ + ++ + S YL++ + G SAG G+G +RL+ +I
Sbjct: 378 GEICGGSERESDLNQLKNRCQSLNIDTKSLNWYLDMRKWGYF-ASAGFGLGFDRLLAYIC 436
Query: 274 GAKHIAEVQPFPRVPG 289
G ++I + PFPRV G
Sbjct: 437 GLENIRDAIPFPRVHG 452
>sp|O07683|SYD_HALSA ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|11271301|pir||T48900 aspartate--tRNA ligase (EC
6.1.1.12) [imported] - Halobacterium salinarum
>gi|2209068|dbj|BAA20527.1| (D82887) aspartyl-tRNA
synthetase [Halobacterium salinarum]
>gi|10580067|gb|AAG19001.1| (AE005000) aspartyl-tRNA
synthetase; AspS [Halobacterium sp. NRC-1]
Length = 436
Score = 84.3 bits (205), Expect = 2e-15
Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 46/306 (15%)
Query: 17 IQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRMRLTHSM 76
+++K + MT +F D F+ + T L A G V Y L+ S
Sbjct: 138 LRSKAMGAMTDWFYDNRFEEV-------DTPELSTAGAEGGADLFPVVYYDKEAYLSQSP 190
Query: 77 ILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK-MKDVMRLIEE 135
L+KQ+ +A G++++F + R E RH E D E+ + DVM + EE
Sbjct: 191 QLYKQILVASGVDRLFEVGHAFRAEDF--GTSRHVSEIAMFDVELGYVEDHHDVMDVQEE 248
Query: 136 LIYGLFRKAEEWTGRE--------------FPR-----ARHFKVYDYKDILEEFGS-DEK 175
+ R E RE FPR AR +Y + E+ D K
Sbjct: 249 SLRHTIRHVVEHAQRELDELGSDLSVPEADFPRITFEEAREILADEYDHVPEDDNDLDTK 308
Query: 176 ASMEMEEPF--------WIVNIPRE-FYDREE----NGVWKNYDLILPYGYGEVSSGGER 222
+ E F ++V P E FY R++ + + +DL+ Y E+SSGG+R
Sbjct: 309 GERLLGEYFEEQGHPAVFVVGYPDEKFYYRQDVDGDDVASRKFDLL--YRGQELSSGGQR 366
Query: 223 EWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQ 282
E + E++ AK+R G++ ++F YL+ R G + P G G+G++RL++ + G +I E
Sbjct: 367 EHDIERLTAKMREQGVEPENFEFYLDAFRYG-VPPHGGYGLGIDRLIQQLAGLDNIKEAI 425
Query: 283 PFPRVP 288
FPR P
Sbjct: 426 LFPRDP 431
>gb|AAF61689.1| (AF219996) aspartyl-tRNA synthetase 2 [Thermus thermophilus]
Length = 422
Score = 81.5 bits (198), Expect = 1e-14
Identities = 74/259 (28%), Positives = 123/259 (46%), Gaps = 44/259 (16%)
Query: 63 VDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIE 122
VD + R L S L+KQ+ + + E+++ ++P R+E RH E+ LD E+
Sbjct: 166 VDYFEKRAYLAQSPQLYKQIMVGV-FERVYEVAPVWRMEEHHTS--RHLNEYLSLDVEMG 222
Query: 123 G-AKMKDVMRLIEELIYGLFRKAEEWTGREF--------------PRARHFKVYDYKDIL 167
A +D+MRL E L+ + +A G E PR H + K IL
Sbjct: 223 FIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFPQDIPRLTHAEA---KRIL 279
Query: 168 EE-----FGSD-----EKASMEMEEPFW------IVNIPRE---FYDR-EENGVWKNYDL 207
+E G D E+ E + W + PR FY EE+G +++DL
Sbjct: 280 KEELGYPVGQDLSEEAERLLGEYAKERWGSDWLFVTRYPRSVRPFYTYPEEDGTTRSFDL 339
Query: 208 ILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVER 267
+ + E++SGG+R YE+++ ++A G+ ++F YLE+ + G + P G IG ER
Sbjct: 340 L--FRGLEITSGGQRIHRYEELLESLKAKGMDPEAFHGYLEVFKYG-MPPHGGFAIGAER 396
Query: 268 LVRFIVGAKHIAEVQPFPR 286
L + ++G ++ + FPR
Sbjct: 397 LTQKLLGLPNVRYARAFPR 415
>sp|P75521|SYN_MYCPN ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|2146064|pir||S73906 asparagine--tRNA ligase (EC
6.1.1.22) asnS - Mycoplasma pneumoniae (strain ATCC
29342) >gi|1674281|gb|AAB96228.1| (AE000057)
asparaginyl-tRNA synthetase [Mycoplasma pneumoniae]
Length = 455
Score = 80.8 bits (196), Expect = 2e-14
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 53/254 (20%)
Query: 85 AMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMRLIEELIYGLFRKA 144
A +K+F P R E + RH EF ++ E+ A +KD+++LIE + + ++
Sbjct: 202 AQAFKKVFTFGPTFRAE--KSHTSRHLSEFWMIEPEVAFANLKDLIKLIESTVKTVIKQV 259
Query: 145 EEWTGREFP------------------RARHFKVYDYKDILE------------------ 168
+ +E ++F V +Y LE
Sbjct: 260 MQKAKQELDFLEKQFDVKLMERLKQITSTKNFHVLEYTKALEILKTAQASGQANFEVQDF 319
Query: 169 EFGSDEKASMEM--------EEPFWIVNIPREF--YDREENGVWKNY---DLILPYGYGE 215
FG D K E +P +++N P++F + ++N + DL+ P GE
Sbjct: 320 NFGLDLKTEHERFLCEQHFHNQPVFVINYPKDFKAFYMKQNADGRTVGAVDLLFPQ-IGE 378
Query: 216 VSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGA 275
+ G ERE EK+V + +A + + YL++ + G SAG G+G +RL+ +I G
Sbjct: 379 ICGGSEREGNLEKLVERCQAMQIDTQTLNWYLDMRKWGYFA-SAGFGLGFDRLLAYICGL 437
Query: 276 KHIAEVQPFPRVPG 289
++I + PFPR G
Sbjct: 438 ENIRDAIPFPRAHG 451
>sp|O26328|SYD_METTH ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|7437592|pir||A69128 aspartate--tRNA ligase (EC
6.1.1.12) - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621273|gb|AAB84732.1| (AE000809)
aspartyl-tRNA synthetase [Methanobacterium
thermoautotrophicum]
Length = 437
Score = 80.8 bits (196), Expect = 2e-14
Identities = 71/243 (29%), Positives = 112/243 (45%), Gaps = 32/243 (13%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVMR 131
L S L+KQ+ ++ GL++++ ++P R E D RH E +D E +DVM+
Sbjct: 192 LGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEH--DTLRHLNEVISIDIEASFVDHEDVMK 249
Query: 132 LIEELIYGLFRK-------AEEWTGR--EFPRARHFKVYDYKDILE---------EFGSD 173
++E L+ + A E GR E P F+ +Y + +E + G D
Sbjct: 250 ILENLVVRVIEDVNEHCTDALETLGRTLEVPETP-FERLEYDEAVEMVNSKGVPMKHGED 308
Query: 174 -----EKASMEMEEPF-----WIVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGERE 223
EKA E+ + + W I + +E+ +++ L Y E+SSG R
Sbjct: 309 LPRAAEKALGEIMDGYYFITSWPTAIKPFYVMPDEDDPERSHAFDLMYRDLEISSGAMRV 368
Query: 224 WEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQP 283
+++ +V KI+ GL DSF YL G + P AG G+G ER + G K+I E
Sbjct: 369 HQHDLLVEKIKRQGLNPDSFESYLSAFEYG-MPPHAGWGLGAERFNMTLTGLKNIRETVL 427
Query: 284 FPR 286
FPR
Sbjct: 428 FPR 430
>pir||C72527 probable aspartyl-tRNA synthetase APE2192 - Aeropyrum pernix
(strain K1) >gi|5105891|dbj|BAA81203.1| (AP000063) 421aa
long hypothetical aspartyl-tRNA synthetase [Aeropyrum
pernix]
Length = 421
Score = 80.4 bits (195), Expect = 2e-14
Identities = 72/251 (28%), Positives = 112/251 (43%), Gaps = 40/251 (15%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM-KDVM 130
L S +KQ A+ GLE++F + P R E RH E+ LD E+ + DVM
Sbjct: 168 LAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTS--RHLNEYHSLDIEVGFIESYNDVM 225
Query: 131 RLIEELIYGLFRKAEE-------WTGREFPRA-------------------RHFKVYDYK 164
+E + + R EE G E PR ++ K +Y
Sbjct: 226 NYVEGFMRAIVRMLEEDGRRVLELYGVELPRIPASGIPKIPLRKAYEILEEKYGKKVEYG 285
Query: 165 DILEEFGS---DEKASMEMEEPF-WIVNIP---REFYD--REENGVWKNYDLILPYGYGE 215
+ L+ G A E++ F +IV P R FY +++ W Y L Y E
Sbjct: 286 EDLDSEGERLMGAYAGEELDSDFVFIVEYPWKVRPFYTMRKDDEPSW-TYSFDLLYRGLE 344
Query: 216 VSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGA 275
+ +GG+RE Y +++ +R GL +SF+ YL+ + G P GAG+G+ER+V +
Sbjct: 345 IVTGGQREHRYHRLLENLRDKGLDAESFQFYLDFFKHG-APPHGGAGMGLERIVMQTLKL 403
Query: 276 KHIAEVQPFPR 286
++I E + PR
Sbjct: 404 ENIREARMLPR 414
>sp|Q9Y9U7|SYD_AERPE ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
Length = 442
Score = 80.4 bits (195), Expect = 2e-14
Identities = 72/251 (28%), Positives = 112/251 (43%), Gaps = 40/251 (15%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKM-KDVM 130
L S +KQ A+ GLE++F + P R E RH E+ LD E+ + DVM
Sbjct: 189 LAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTS--RHLNEYHSLDIEVGFIESYNDVM 246
Query: 131 RLIEELIYGLFRKAEE-------WTGREFPRA-------------------RHFKVYDYK 164
+E + + R EE G E PR ++ K +Y
Sbjct: 247 NYVEGFMRAIVRMLEEDGRRVLELYGVELPRIPASGIPKIPLRKAYEILEEKYGKKVEYG 306
Query: 165 DILEEFGS---DEKASMEMEEPF-WIVNIP---REFYD--REENGVWKNYDLILPYGYGE 215
+ L+ G A E++ F +IV P R FY +++ W Y L Y E
Sbjct: 307 EDLDSEGERLMGAYAGEELDSDFVFIVEYPWKVRPFYTMRKDDEPSW-TYSFDLLYRGLE 365
Query: 216 VSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGA 275
+ +GG+RE Y +++ +R GL +SF+ YL+ + G P GAG+G+ER+V +
Sbjct: 366 IVTGGQREHRYHRLLENLRDKGLDAESFQFYLDFFKHG-APPHGGAGMGLERIVMQTLKL 424
Query: 276 KHIAEVQPFPR 286
++I E + PR
Sbjct: 425 ENIREARMLPR 435
>pir||E82217 asparaginyl-tRNA synthetase VC1297 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9655785|gb|AAF94456.1|
(AE004209) asparaginyl-tRNA synthetase [Vibrio cholerae]
Length = 481
Score = 80.4 bits (195), Expect = 2e-14
Identities = 81/321 (25%), Positives = 138/321 (42%), Gaps = 68/321 (21%)
Query: 27 KFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDV-----------------YGVR 69
+F+ ++G+ W+ +P+ + AGE R + +D+ +G
Sbjct: 165 RFYHEQGYFWVS----APLITASDAEGAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKE 220
Query: 70 MRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDV 129
LT S L+ + A A + K++ P R E+ + RH EF ++ E+ A + V
Sbjct: 221 TFLTVSGQLNAE-AYACAISKVYTFGPTFRAEN--SNTSRHLAEFWMVEPEVAFADLNTV 277
Query: 130 MRLIEELIYGLFRK--AEEWTGREFPRAR---------------HFKVYDYKDILE---- 168
+L E+++ +F+ AE EF R F DY D +E
Sbjct: 278 AKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQVDYTDAIEILKN 337
Query: 169 ---------EFGSDEKASME-------MEEPFWIVNIPRE---FYDR--EENGVWKNYDL 207
E+G D + E + P + N P++ FY R E+ D+
Sbjct: 338 CGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDIKAFYMRMNEDGKTVAAMDV 397
Query: 208 ILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVER 267
+ P G GE+ G +RE + + A++R G+ + Y ++ R G + P AG G+G ER
Sbjct: 398 LAP-GIGEIIGGSQREERLDILDARMREFGIDPEHMDWYRDLRRYGTV-PHAGFGLGFER 455
Query: 268 LVRFIVGAKHIAEVQPFPRVP 288
LV ++ G ++ +V PFPR P
Sbjct: 456 LVSYVTGMGNVRDVIPFPRTP 476
>dbj|BAB05415.1| (AP001512) asparaginyl-tRNA synthetase [Bacillus halodurans]
Length = 430
Score = 80.0 bits (194), Expect = 3e-14
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 46/316 (14%)
Query: 6 IISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPA-EVD 64
I SR + + I+ +I+ +FF + GF + P P+ A EG
Sbjct: 121 IRSRKQHAVLRIRNEIIRATYEFFHENGFVKVDP--------PILTGSAPEGTTELFHTK 172
Query: 65 VYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGA 124
+ L+ S L+ + A A+ ++F P R E + RH EF ++ E+
Sbjct: 173 YFDEDAFLSQSGQLYMEAA-ALAFGRVFSFGPTFRAEKSKTR--RHLIEFWMIEPEMAFV 229
Query: 125 KMKDVMRLIEELIYGLFRKAEEWTGRE-----------------FPRAR--------HFK 159
+ ++ + + E + + + + E FPR H K
Sbjct: 230 EFEESLEIQENYVAYIVQSVLKHCAIELKTLGRDTSVLESIQAPFPRISYDDAIKFLHEK 289
Query: 160 VYDYKDILEEFGSDEKASM--EMEEPFWIVNIP---REFY---DREENGVWKNYDLILPY 211
+D + ++FG+ + ++ ++P +I + P + FY D + V DLI P
Sbjct: 290 GFDDIEWGDDFGAPHETAIAEHFDKPVFITHYPTSLKPFYMEPDPNRDDVVLCADLIAPE 349
Query: 212 GYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRF 271
GYGE+ G +R +Y+ + ++ L D++ YL++ + G + P +G G+G+ER V +
Sbjct: 350 GYGEIIGGSQRISDYDLLKKRLEEHDLSLDAYAWYLDLRKYGSV-PHSGFGLGLERTVGW 408
Query: 272 IVGAKHIAEVQPFPRV 287
I GA H+ E PFPR+
Sbjct: 409 ISGAGHVRETIPFPRL 424
>sp|O51128|SYN_BORBU ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|7437580|pir||E70112 asparagine--tRNA ligase (EC
6.1.1.22) asnS - Lyme disease spirochete
>gi|2687998|gb|AAC66501.1| (AE001123) asparaginyl-tRNA
synthetase (asnS) [Borrelia burgdorferi]
Length = 466
Score = 79.2 bits (192), Expect = 6e-14
Identities = 69/267 (25%), Positives = 117/267 (42%), Gaps = 47/267 (17%)
Query: 64 DVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEG 123
D +G L+ + LH + A AM L KI+ P R E+ + RH+ EF ++ E+
Sbjct: 200 DFFGKEAFLSVTGQLHGE-AYAMALSKIYTFGPTFRAEN--SNTTRHASEFWMIEPEMAF 256
Query: 124 AKMKDVMRLIEELIY-----------------------GLFRKAEEWTGREFPRARHFKV 160
K+ D + L E+L+ GL +K E F + K
Sbjct: 257 YKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKA 316
Query: 161 YDYKD-------ILEEFGSDEKASME-------MEEPFWIVNIPREFYD-----REENGV 201
+ + I +G D + E ++P +++ P+ F ++N
Sbjct: 317 IEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMKANKDNKT 376
Query: 202 WKNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGA 261
K D+++P GE+ G ERE + +K+ +I+ L + YL++ R G P +G
Sbjct: 377 VKGMDILVPK-IGEIIGGSEREDDLQKLENRIKELNLNIEHLNWYLDLRRFGSA-PHSGF 434
Query: 262 GIGVERLVRFIVGAKHIAEVQPFPRVP 288
G+G+ERLV++ G +I + PFPR P
Sbjct: 435 GLGLERLVQYSTGISNIRDSIPFPRTP 461
>gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfataricus]
Length = 429
Score = 78.8 bits (191), Expect = 7e-14
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 36/251 (14%)
Query: 66 YGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK 125
+G L S L+K+L +A +E++F ++P R E D H EF +D E+ A
Sbjct: 178 FGKEAFLAQSPQLYKEL-LAGAIERVFEIAPAWRAEE--SDTPYHLSEFISMDVEMAFAD 234
Query: 126 MKDVMRLIEELIYGLFRKAEEWTGREF-------PRAR-HFKVYDYKDILE--------- 168
D+M LIE++IY + + E P R K Y D +E
Sbjct: 235 YNDIMALIEQIIYNMINDVKRECENELKILNYTPPNVRIPIKKVSYSDAIELLKSKGVNI 294
Query: 169 EFGSD------EKASMEMEEPFWIVN----IPREFYDREENG---VWKNYDLILPYGYGE 215
+FG D E++E + V + R FY +++ + +++DLI + + E
Sbjct: 295 KFGDDIGTPELRVLYNELKEDLYFVTDWPWLSRPFYTKQKKDNPQLSESFDLI--FRWLE 352
Query: 216 VSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGA 275
+ SG R E + ++ GL +SF +L+ G + P AG G+G+ R++ + G
Sbjct: 353 IVSGSSRNHVKEVLENSLKVRGLNPESFEFFLKWFDYG-MPPHAGFGMGLARVMLMLTGL 411
Query: 276 KHIAEVQPFPR 286
+ + EV PFPR
Sbjct: 412 QSVKEVVPFPR 422
>sp|O24822|SYD_HALVO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|3298338|dbj|BAA31457.1| (AB010464) aspartyl tRNA
synthetase [Haloferax volcanii]
Length = 433
Score = 76.1 bits (184), Expect = 5e-13
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 38/257 (14%)
Query: 63 VDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIE 122
+ +G + S L KQL + GLE++F + P R E RH E T +DFE
Sbjct: 175 ITYFGQEAFMNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTP--RHLNEATSIDFESA 232
Query: 123 GAKMKDVMRLIEELIYGLFRKAEE---------WTGREFPR-----ARHFK----VYDYK 164
+ M + E ++ + EE EF R A H + +
Sbjct: 233 FIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFERRPRVPAAHLRGGHRAHQRT 292
Query: 165 DILEE---FGSD-----EKASME-MEEPFWIVNIPRE---FYDREENG---VWKNYDLIL 209
L+E +G D EKA E + E ++I + P E FY ++ + + +D++
Sbjct: 293 GELDEQLVWGDDLPTEGEKALGEDVGEHYFITDWPSEIKPFYIKDHDDDETLSTGFDMMH 352
Query: 210 PYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLV 269
P E+ SGG+RE ++ +VA GL D+F Y ++ + G + P AG G+G ERL+
Sbjct: 353 PNM--ELVSGGQREHRFDHLVAGFEQQGLDPDAFEYYTKMFKYG-MPPHAGFGLGGERLI 409
Query: 270 RFIVGAKHIAEVQPFPR 286
++G ++I E FPR
Sbjct: 410 MTMLGLENIREAVLFPR 426
>pir||A75071 aspartyl-tRNA synthetase (asps) PAB0646 - Pyrococcus abyssi
(strain Orsay) >gi|5458382|emb|CAB49870.1| (AJ248286)
aspartyl-tRNA synthetase (aspS) [Pyrococcus abyssi]
Length = 438
Score = 75.3 bits (182), Expect = 8e-13
Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 44/252 (17%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKD-VM 130
L S L+KQ+ ++ GL+K+F + P R E RH E +D E+ + ++ VM
Sbjct: 187 LAQSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTT--RHLNEAWSIDAEMAFIESEEEVM 244
Query: 131 RLIEELIYGLFRKAEEWTGRE--------------FPRARHFKVYDY-KDILEEFGSDEK 175
L+E LI + E +E FPR + + + D+ +E E
Sbjct: 245 DLLERLILYVINYVRENNEKELKILEFELNEPKKPFPRITYDEALEILSDLGKEIPWGED 304
Query: 176 ASMEME-------------EPFWIVNIPRE---FY-----DREENGVWKNYDLILPYGYG 214
E E E ++I P E FY D+ E V K +DL Y
Sbjct: 305 IDTEGEKLLGKYMLENEGAELYFIYRYPSEAKPFYIMKYEDKPE--VCKAFDL--EYRGV 360
Query: 215 EVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVG 274
E+SSGG+RE ++ +V +IR GL +SF YL G + P G G+G ERL+ ++
Sbjct: 361 EISSGGQREHRHDILVEQIREKGLNPESFEFYLRAFEYG-MPPHGGFGLGAERLIMRMLD 419
Query: 275 AKHIAEVQPFPR 286
+I EV FPR
Sbjct: 420 IGNIREVILFPR 431
>sp|O58776|SYD_PYRHO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|7437590|pir||G71094 aspartate--tRNA ligase (EC
6.1.1.12) - Pyrococcus horikoshii
>gi|3257434|dbj|BAA30117.1| (AP000004) 438aa long
hypothetical aspartyl-tRNA synthetase [Pyrococcus
horikoshii]
Length = 438
Score = 74.5 bits (180), Expect = 1e-12
Identities = 75/254 (29%), Positives = 115/254 (44%), Gaps = 48/254 (18%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMK-DVM 130
L S L+KQ+ +A GL+K+F ++P R E RH E +D E+ + + +VM
Sbjct: 187 LAQSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTT--RHLNEAWSIDAEMAFIENEGEVM 244
Query: 131 RLIEELIYGLFRKAEEWTGRE--------------FPRARHFKVYDYKDILEEFGSD--- 173
L+E LI + E +E FPR + K + IL + G +
Sbjct: 245 DLLERLISYVINYVREHNEKELKTLEFELNEPKRPFPRITYDKALE---ILSDLGKEIPW 301
Query: 174 --------EK------ASMEMEEPFWIVNIPREF-------YDREENGVWKNYDLILPYG 212
EK A E + ++I P E YD E+ V + +DL Y
Sbjct: 302 GEDIDTEGEKLLGKYMAENEGADLYFIYRYPSEAKPFYIMKYD-EKPEVCRAFDL--EYR 358
Query: 213 YGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFI 272
E+SSGG+RE ++ ++ +I+ GL SF YL+ G + P G G+G ERL+ +
Sbjct: 359 GVEISSGGQREHRHDVLLEQIKEKGLNPKSFEFYLKAFEYG-MPPHGGFGLGAERLIMRM 417
Query: 273 VGAKHIAEVQPFPR 286
+ +I EV FPR
Sbjct: 418 LDIGNIREVILFPR 431
>sp|O83618|SYN_TREPA ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
>gi|7437574|pir||F71302 asparagine--tRNA ligase (EC
6.1.1.22) (asnS) - syphilis spirochete
>gi|3322907|gb|AAC65585.1| (AE001236) asparaginyl-tRNA
synthetase (asnS) [Treponema pallidum]
Length = 523
Score = 73.4 bits (177), Expect = 3e-12
Identities = 36/86 (41%), Positives = 56/86 (64%), Gaps = 2/86 (2%)
Query: 203 KNYDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAG 262
++ DL++P G GE+ G ERE ++E + A+IRA+G +R Y ++ R G P AG G
Sbjct: 435 RSMDLLVP-GLGEIMGGSEREEQFEVLCARIRASGFDPHDYRWYTDLRRFG-TAPHAGFG 492
Query: 263 IGVERLVRFIVGAKHIAEVQPFPRVP 288
+G ERL++++ G +I +V PFPR P
Sbjct: 493 LGFERLLQYVTGLGNIRDVIPFPRTP 518
>sp|Q52428|SYD_PYRKO ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
>gi|2129413|pir||JC4352 aspartate--tRNA ligase (EC
6.1.1.12) - Pyrococcus sp >gi|1136773|dbj|BAA08115.1|
(D45167) aspartyl-tRNA synthetase [Pyrococcus sp.]
Length = 438
Score = 73.0 bits (176), Expect = 4e-12
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 48/254 (18%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK-MKDVM 130
L S L+KQ+ +A GL++++ ++P R E RH E +D E+ + ++VM
Sbjct: 187 LAQSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTT--RHLNEAWSIDSEMAFIEDEEEVM 244
Query: 131 RLIEELIYGLFRKAEEWTGRE--------------FPRARHFKVYDYKDILEEFGSD--- 173
+E L+ E +E FPR + K + IL + G +
Sbjct: 245 SFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALE---ILGDLGKEIPW 301
Query: 174 ------------EKASMEMEEP--FWIVNIPREF-------YDREENGVWKNYDLILPYG 212
K ME E +++ P E YD + + + +DL Y
Sbjct: 302 GEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPE-ICRAFDL--EYR 358
Query: 213 YGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFI 272
E+SSGG+RE ++ +V +I+ GL +SF YL+ R G + P G G+G ER+++ +
Sbjct: 359 GVEISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRYG-MPPHGGFGLGAERVIKQM 417
Query: 273 VGAKHIAEVQPFPR 286
+ +I EV FPR
Sbjct: 418 LDLPNIREVILFPR 431
>pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase >gi|4388837|pdb|1B8A|B Chain B,
Aspartyl-Trna Synthetase
Length = 438
Score = 73.0 bits (176), Expect = 4e-12
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 48/254 (18%)
Query: 72 LTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK-MKDVM 130
L S L+K++ +A GL++++ ++P R E RH E +D E+ + ++VM
Sbjct: 187 LAESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTT--RHLNEAWSIDSEMAFIEDEEEVM 244
Query: 131 RLIEELIYGLFRKAEEWTGRE--------------FPRARHFKVYDYKDILEEFGSD--- 173
+E L+ E +E FPR + K + IL + G +
Sbjct: 245 SFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALE---ILGDLGKEIPW 301
Query: 174 ------------EKASMEMEEP--FWIVNIPREF-------YDREENGVWKNYDLILPYG 212
K ME E +++ P E YD + + + +DL Y
Sbjct: 302 GEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPE-ICRAFDL--EYR 358
Query: 213 YGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERLVRFI 272
E+SSGG+RE ++ +V +I+ GL +SF YL+ R G + P G G+G ERL++ +
Sbjct: 359 GVEISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRYG-MPPHGGFGLGAERLIKQM 417
Query: 273 VGAKHIAEVQPFPR 286
+ +I EV FPR
Sbjct: 418 LDLPNIREVILFPR 431
>pir||S77842 probable asparagine--tRNA ligase (EC 6.1.1.22) - Mycoplasma
capricolum (fragment) >gi|530408|emb|CAA83705.1|
(Z33026) Asn-tRNA synthetase [Mycoplasma capricolum]
Length = 172
Score = 71.8 bits (173), Expect = 9e-12
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 16/140 (11%)
Query: 161 YDYKDILEEFGSDEKASMEM-------EEPFWIVNIPRE---FY--DREENGVWKNYDLI 208
++ DI EFG D E + P ++ N P+E FY E+N DL+
Sbjct: 32 FEVSDI--EFGLDLGTEHERYICEQVNKAPTFVTNYPKEIKAFYMKQNEDNKTVAAVDLL 89
Query: 209 LPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERL 268
+P G GE+ G +RE YEK++ + + + D Y + G K SAG G+G ERL
Sbjct: 90 VP-GIGELVGGSQREDNYEKLIKRCKEVNIDIDQLEWYNNLRLYGYYK-SAGFGLGFERL 147
Query: 269 VRFIVGAKHIAEVQPFPRVP 288
+ +I GA +I +V PFPR P
Sbjct: 148 IMYITGASNIRDVIPFPRTP 167
>emb|CAC12075.1| (AL445066) aspartyl-tRNA synthetase related protein [Thermoplasma
acidophilum]
Length = 428
Score = 69.5 bits (167), Expect = 5e-11
Identities = 67/258 (25%), Positives = 113/258 (42%), Gaps = 39/258 (15%)
Query: 58 IRPAEVDVYGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQL 117
+R E D Y L S L+K++ ++ G +++F + P R E RH EFT +
Sbjct: 174 VRYFEKDAY-----LNQSPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTT--RHLNEFTSI 226
Query: 118 DFEIEGAKMKDVMRLIEELIYGLFRKAEEWTGREF--------------PRARHFKVYDY 163
D E+ A D M ++E I A +F PR + + D
Sbjct: 227 DIEMSFADHNDAMAMLENAIRSGIENAVRENAEDFESLGISISVPETPFPRITYEQCIDL 286
Query: 164 --KDILE-----EFGSDEKASM--EMEEPFWIVNIP---REFYDR---EENGVWKNYDLI 208
KD ++ +F D+ ++ ++I P R FY E+ + ++DL
Sbjct: 287 LQKDGIDFTFGDDFSPDQLRTIGSRFSGFYFITEWPSSVRPFYTMPKSEDPRLTNSFDL- 345
Query: 209 LPYGYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRPYLEIARAGKLKPSAGAGIGVERL 268
Y EV+SG +R + + ++ + L SF+ Y++ + G + P AG G+G+ERL
Sbjct: 346 -QYREIEVTSGAQRVHDPKMLIQRFNEKKLDVKSFQFYVDAFKYG-MPPHAGWGLGLERL 403
Query: 269 VRFIVGAKHIAEVQPFPR 286
++G +I E FPR
Sbjct: 404 TMILLGLNNIRETTLFPR 421
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.428
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117077076
Number of Sequences: 2977
Number of extensions: 5227738
Number of successful extensions: 11063
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 11000
Number of HSP's gapped (non-prelim): 33
length of query: 294
length of database: 189,106,746
effective HSP length: 52
effective length of query: 242
effective length of database: 157,985,422
effective search space: 38232472124
effective search space used: 38232472124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)