BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2359 (korA-1) DE:2-ketoglutarate ferredoxin oxidoreductase,
subunit alpha (korA-1)
(408 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 837 0.0
pir||B71047 probable ferredoxin oxidoreductase alpha subunit - P... 790 0.0
pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 437 e-121
pir||F71046 probable ferredoxin oxidoreductase alpha subunit - P... 435 e-121
sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 373 e-102
pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 358 7e-98
sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 358 7e-98
pir||H72323 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 351 9e-96
pir||H81399 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 282 6e-75
gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit a... 279 4e-74
pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 268 1e-70
pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacte... 266 3e-70
gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:accepto... 257 2e-67
pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (s... 246 4e-64
dbj|BAB06093.1| (AP001515) pyruvate synthase alpha subunit [Baci... 204 1e-51
sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 202 5e-51
pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 202 5e-51
gb|AAG19013.1| (AE005001) pyruvate ferredoxin oxidoreductase, su... 200 2e-50
pir||F70864 probable oxidoreductase alpha subunit - Mycobacteriu... 190 3e-47
emb|CAB60189.1| (AL132824) putative oxidoreductase alpha-subunit... 186 3e-46
emb|CAC08296.1| (AL392148) putative oxidoreductase [Streptomyces... 186 3e-46
pir||A72519 probable 2-oxoacid--ferredoxin oxidoreductase alpha ... 180 3e-44
pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validate... 176 4e-43
gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin ox... 176 4e-43
emb|CAC11904.1| (AL445065) probable 2-oxoacid ferredoxin oxidore... 176 4e-43
emb|CAC11404.1| (AL445063) probable pyruvate ferredoxin oxidored... 168 1e-40
pir||A72627 probable 2-oxoacid--ferredoxin oxidoreductase, alpha... 167 2e-40
gb|AAK42926.1| 2-oxoacid--ferredoxin oxidoreductase, alpha chain... 162 5e-39
pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit -... 153 4e-36
pir||G69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 143 4e-33
pir||JC4919 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 141 2e-32
emb|CAA75641.1| (Y15464) ferredoxin oxidoreductase-like (gamma a... 138 2e-31
gi|11498355 2-oxoacid ferredoxin oxidoreductase, subunit alpha (... 123 3e-27
pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase... 113 4e-24
sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 109 7e-23
pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 -... 108 2e-22
pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit -... 107 2e-22
sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 106 4e-22
pir||A71114 probable ferredoxin oxidoreductase alpha subunit - P... 106 5e-22
sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 106 6e-22
dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase al... 106 6e-22
sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 104 3e-21
sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 103 3e-21
gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 100 4e-20
emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin ox... 99 1e-19
pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 98 2e-19
gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 97 4e-19
gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 96 6e-19
gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alph... 96 9e-19
pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 94 2e-18
pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicob... 94 3e-18
pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 93 5e-18
gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alp... 92 1e-17
emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin ox... 83 5e-15
sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 83 5e-15
gb|AAD28766.1| (AF132216) 2-oxoisovalerate oxidoreductase beta s... 77 4e-13
gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 76 9e-13
pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolo... 76 9e-13
pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alph... 71 3e-11
sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA ... 69 9e-11
>pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-1)
PAB2359 - Pyrococcus abyssi (strain Orsay)
>gi|5457936|emb|CAB49426.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-1)
[Pyrococcus abyssi]
Length = 408
Score = 837 bits (2138), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MPRFCHSCKVVGMIIRGDEPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPI 60
MPRFCHSCKVVGMIIRGDEPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPI
Sbjct: 1 MPRFCHSCKVVGMIIRGDEPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPI 60
Query: 61 TPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENL 120
TPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENL
Sbjct: 61 TPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENL 120
Query: 121 GYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWE 180
GYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWE
Sbjct: 121 GYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWE 180
Query: 181 TIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPH 240
TIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPH
Sbjct: 181 TIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPH 240
Query: 241 GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE 300
GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE
Sbjct: 241 GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE 300
Query: 301 YYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAI 360
YYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAI
Sbjct: 301 YYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAI 360
Query: 361 LVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGVA 408
LVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGVA
Sbjct: 361 LVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGVA 408
>pir||B71047 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258095|dbj|BAA30778.1| (AP000006) 408aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 408
Score = 790 bits (2018), Expect = 0.0
Identities = 376/408 (92%), Positives = 398/408 (97%)
Query: 1 MPRFCHSCKVVGMIIRGDEPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPI 60
M R C+S KVV MIIRGDEPEQK LLRKLY+PGNYFMMGDEA+AYGAIFAGCRFYAGYPI
Sbjct: 1 MSRLCNSRKVVVMIIRGDEPEQKALLRKLYRPGNYFMMGDEAIAYGAIFAGCRFYAGYPI 60
Query: 61 TPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENL 120
TPSSEIAETMARELPKVGGYYLQMEDEI SIAAM+GASWTGLK MTATSGPGFSLMQEN+
Sbjct: 61 TPSSEIAETMARELPKVGGYYLQMEDEIGSIAAMIGASWTGLKAMTATSGPGFSLMQENI 120
Query: 121 GYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWE 180
GYAVMTETP+V+V+VQRSGPSTGQATKGAQGDFFQARWGTHGDHP++A+SP+SVEDAFWE
Sbjct: 121 GYAVMTETPIVVVNVQRSGPSTGQATKGAQGDFFQARWGTHGDHPMIAVSPISVEDAFWE 180
Query: 181 TIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPH 240
TIRAFN+AE+LRTPV+VLFDGILGHTREQIRIPDPDEVEI YRKLP +EEEA+LPFGDPH
Sbjct: 181 TIRAFNIAEKLRTPVIVLFDGILGHTREQIRIPDPDEVEITYRKLPGSEEEAKLPFGDPH 240
Query: 241 GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE 300
GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNR+VYEKYEE
Sbjct: 241 GDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNRDVYEKYEE 300
Query: 301 YYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAI 360
YYTDDAEILVVSWGVSARPSLGAVLKAR+EGIK GLFVPKTVHPFPGERMRELGKKVRAI
Sbjct: 301 YYTDDAEILVVSWGVSARPSLGAVLKAREEGIKAGLFVPKTVHPFPGERMRELGKKVRAI 360
Query: 361 LVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGVA 408
LVPEMNLGQM+LEVQRFVNDDV+LKGVNKIGGVPLTVEEIL+EIRGVA
Sbjct: 361 LVPEMNLGQMVLEVQRFVNDDVILKGVNKIGGVPLTVEEILKEIRGVA 408
>pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-2)
PAB0346 - Pyrococcus abyssi (strain Orsay)
>gi|5457939|emb|CAB49429.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-2)
[Pyrococcus abyssi]
Length = 385
Score = 437 bits (1111), Expect = e-121
Identities = 217/370 (58%), Positives = 273/370 (73%)
Query: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMV 95
F+ GDEA+A AI AGCRFYAGYPITP+SEI E MA +P V G +QMEDEIASIAA++
Sbjct: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAII 71
Query: 96 GASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ 155
GASW G K MTATSGPGFSLMQEN+GYAVMTETP+V+VDVQR GPSTGQ T +QGD Q
Sbjct: 72 GASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIMQ 131
Query: 156 ARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDP 215
+ WGTHGDH ++ +SP +V++AF TIRAFN+AE+ RTPV++L D +GH RE++ IP+P
Sbjct: 132 SIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
Query: 216 DEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
DE+EIV RKLPQNEEEA+LPFGDPHGD VPPMP+FG GY T+VTG TH E G +E
Sbjct: 192 DEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGYRTYVTGLTHDERGRPRTVERE 251
Query: 276 VHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVG 335
VH++++RRI KIE+N++ YE DDAE+ +V+ G+ AR +L A+ + R+ GIK G
Sbjct: 252 VHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKELRELGIKAG 311
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
L T+ PF E + ++ KV I VPEMNLGQ+ V+ N +K ++KIGG
Sbjct: 312 LLKINTIWPFDFELIEKIAGKVERIYVPEMNLGQLYHLVREGANGKAEVKLISKIGGEVH 371
Query: 396 TVEEILREIR 405
T EI+ IR
Sbjct: 372 TPMEIVDFIR 381
>pir||F71046 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258091|dbj|BAA30774.1| (AP000006) 385aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 385
Score = 435 bits (1107), Expect = e-121
Identities = 215/370 (58%), Positives = 273/370 (73%)
Query: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMV 95
F+ GDEA+A AI AGCRFYAGYPITP+SEI E MA +P + G +QMEDEI SIAA++
Sbjct: 12 FIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLIDGVVIQMEDEIGSIAAVI 71
Query: 96 GASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ 155
GASW G+K MTATSGPGFSLMQEN+GYAVMTETP+V+V+VQR GPSTGQ T +QGD Q
Sbjct: 72 GASWAGVKAMTATSGPGFSLMQENIGYAVMTETPIVVVNVQRGGPSTGQPTLPSQGDIMQ 131
Query: 156 ARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDP 215
+ WGTHGDH ++ +SP +V++AF TIRAFN+AE+ RTPV++L D +GH RE++ IP+P
Sbjct: 132 SIWGTHGDHTLIVLSPSTVQEAFDFTIRAFNLAEKYRTPVILLSDAEVGHMRERVYIPEP 191
Query: 216 DEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
DE+EIV RKLP +EEEA+LPFGDPHGDGVPPMP+FG GY T+VTG TH E G +E
Sbjct: 192 DEIEIVNRKLPGSEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHDEKGRPRTVERE 251
Query: 276 VHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVG 335
VH++L+RRI KIE+N++ YE DDAEI +V+ G+ AR +L A+ + R GIK G
Sbjct: 252 VHERLIRRIFEKIEKNKKDIFDYEARELDDAEIAIVTTGIVARSALRAIKELRNLGIKAG 311
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
L T+ PF E + ++ +KV I VPEMNLGQ+ V+ N +K ++KIGG
Sbjct: 312 LLKINTIWPFDFELIEKVAEKVERIYVPEMNLGQLYHLVKEGANGKAEVKLISKIGGEVH 371
Query: 396 TVEEILREIR 405
T EI+ IR
Sbjct: 372 TPMEIIDFIR 381
>sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2127893|pir||E64334 2-oxoacid--ferredoxin
oxidoreductase (EC 1.2.7.-) alpha chain - Methanococcus
jannaschii >gi|1592279|gb|AAB98264.1| (U67483)
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha
(korA) [Methanococcus jannaschii]
Length = 366
Score = 373 bits (948), Expect = e-102
Identities = 200/373 (53%), Positives = 263/373 (69%), Gaps = 13/373 (3%)
Query: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMV 95
FM G++A A GAI AGCRF+AGYPITPS+EIAE MARELPKVGGYY+QMEDEI SIAA++
Sbjct: 5 FMQGNQACAKGAIKAGCRFFAGYPITPSTEIAEAMARELPKVGGYYIQMEDEIGSIAAVI 64
Query: 96 GASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ 155
GASW GLK MTATSGPGFSLMQEN+G+A MTETP V+VD+QR GPSTGQ T +QGD Q
Sbjct: 65 GASWGGLKAMTATSGPGFSLMQENIGFAYMTETPCVVVDIQRGGPSTGQPTMASQGDMMQ 124
Query: 156 ARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDP 215
RWG+HGD+ ++A++P SV++ + TI AFN AE+ R PV V+ D I+GH RE++ +
Sbjct: 125 CRWGSHGDYEVIALAPSSVQEMYDFTIMAFNYAEKYRIPVFVMADEIVGHMREKVIL--H 182
Query: 216 DEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
D +EI+ RK P+ E+ + P+ P +P MP+FG GY H+TG TH E G DV + E
Sbjct: 183 DNIEIINRKKPE-EKPCKKPY--PFDKLIPEMPVFGEGYNVHITGLTHDERGYPDV-SPE 238
Query: 276 VHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVG 335
HDKLVRRI KI +N++ K+E DAEI+ V +G +R AV R++G+ VG
Sbjct: 239 THDKLVRRIVNKIRKNKDEIIKWEGENL-DAEIVFVCYGSPSRTVKHAVRNLREKGLDVG 297
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVN--DDVLLKGVNKIGGV 393
TV+PFP + +++L K + ++VPEMNLGQ+ EV+R ++V+L V+KIGG
Sbjct: 298 YIRLITVYPFPDDLLKKL--KAKKVVVPEMNLGQIYYEVERVCKKAEEVIL--VDKIGGE 353
Query: 394 PLTVEEILREIRG 406
EE+ R + G
Sbjct: 354 LHRPEELERAVLG 366
>pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622136|gb|AAB85529.1| (AE000875) 2-oxoglutarate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 378
Score = 358 bits (909), Expect = 7e-98
Identities = 191/370 (51%), Positives = 247/370 (66%), Gaps = 3/370 (0%)
Query: 35 YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAM 94
YF+ G++A A GAI AGCRF+AGYPITPS+EIAE MA LP+ GG ++QMEDEI ++ A+
Sbjct: 7 YFIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIGALGAV 66
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
+GA W+G++ MTATSGPGFSLMQE++GYA MTETPLV+V+VQR PSTGQ T +Q D
Sbjct: 67 IGAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMM 126
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPD 214
QARWG+HGD+ I+A+SP SV++ F T+RAFN+AE R PV+V+ D I+GH RE+I I
Sbjct: 127 QARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI-- 184
Query: 215 PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQ 274
PD V+I R+ P E LPF P DGVP MP FG GY VTG TH E G D
Sbjct: 185 PDRVKIRKRRGPSVPPEEFLPFSAPE-DGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNP 243
Query: 275 EVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKV 334
E H +LV+R+ KI ++R+ +E T+DA I V+S+G +R AV AR++G++
Sbjct: 244 EGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVRA 303
Query: 335 GLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVP 394
G T PFP +R ++ +LV EMNLGQM EVQR ++ + KIGG
Sbjct: 304 GYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVAAGMAEVELLPKIGGEI 363
Query: 395 LTVEEILREI 404
EEIL I
Sbjct: 364 HRPEEILNMI 373
>sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 376
Score = 358 bits (909), Expect = 7e-98
Identities = 191/370 (51%), Positives = 247/370 (66%), Gaps = 3/370 (0%)
Query: 35 YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAM 94
YF+ G++A A GAI AGCRF+AGYPITPS+EIAE MA LP+ GG ++QMEDEI ++ A+
Sbjct: 5 YFIQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPREGGVFVQMEDEIGALGAV 64
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
+GA W+G++ MTATSGPGFSLMQE++GYA MTETPLV+V+VQR PSTGQ T +Q D
Sbjct: 65 IGAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMM 124
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPD 214
QARWG+HGD+ I+A+SP SV++ F T+RAFN+AE R PV+V+ D I+GH RE+I I
Sbjct: 125 QARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRVPVMVMGDEIVGHMREKITI-- 182
Query: 215 PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQ 274
PD V+I R+ P E LPF P DGVP MP FG GY VTG TH E G D
Sbjct: 183 PDRVKIRKRRGPSVPPEEFLPFSAPE-DGVPEMPAFGDGYRIPVTGLTHDEGGYPDASNP 241
Query: 275 EVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKV 334
E H +LV+R+ KI ++R+ +E T+DA I V+S+G +R AV AR++G++
Sbjct: 242 EGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVRA 301
Query: 335 GLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVP 394
G T PFP +R ++ +LV EMNLGQM EVQR ++ + KIGG
Sbjct: 302 GYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFYEVQRVAAGMAEVELLPKIGGEI 361
Query: 395 LTVEEILREI 404
EEIL I
Sbjct: 362 HRPEEILNMI 371
>pir||H72323 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
TM0878 [similarity] - Thermotoga maritima (strain MSB8)
>gi|4981412|gb|AAD35959.1|AE001753_15 (AE001753)
pyruvate:ferredoxin 2-oxidoreductase-related protein
[Thermotoga maritima]
Length = 386
Score = 351 bits (891), Expect = 9e-96
Identities = 191/374 (51%), Positives = 247/374 (65%), Gaps = 5/374 (1%)
Query: 32 PGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASI 91
P F+ G+EA A GAI AGCRF+AGYPITPS+EIAE MARELPKVGG ++QMEDEIAS
Sbjct: 4 PEMMFLQGNEACALGAIKAGCRFFAGYPITPSTEIAEVMARELPKVGGVFVQMEDEIASA 63
Query: 92 AAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQG 151
AA+VGAS G+K MTATSGPGFSL+QE +GYA+MTETP V +V R GPSTG TK AQG
Sbjct: 64 AAVVGASLAGVKSMTATSGPGFSLIQEVIGYAIMTETPCVFANVMRLGPSTGLPTKPAQG 123
Query: 152 DFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIR 211
D Q RWGTHGDH I+A+ P SV + + I AFN+AE RTPVV L D +LGH RE
Sbjct: 124 DIMQTRWGTHGDHAIIALYPSSVAEVYRYIITAFNLAEEYRTPVVFLMDAMLGHMRESFY 183
Query: 212 IPDPDEVEIVYRKLPQN--EEEARLPFGDPHGDGVPPMPLFGHGYFT-HVTGSTHKENGL 268
P +E+ I+ R + EE+ +PF + P P+ G HV+G H E+G
Sbjct: 184 PPKDEELFIIERLKDTSFGEEDLFVPFSESEYAEPTPFPMAEMGKTKFHVSGLVHDESGF 243
Query: 269 RDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKAR 328
+ + + +KL+RR+ KI + + YEEY T+DAEILVV++G+ AR ++ AV AR
Sbjct: 244 -PLSSPDAAEKLIRRLTNKIRLHADEIAFYEEYETEDAEILVVAYGIVARSAMKAVKIAR 302
Query: 329 KEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILE-VQRFVNDDVLLKGV 387
++ IKVGLF P T+ P P R R+L +KV I++ EMNLGQ E + +++ +
Sbjct: 303 RDRIKVGLFKPITIWPAPVSRFRKLAEKVNTIVIAEMNLGQYAKELISSIDRRSKVIRTI 362
Query: 388 NKIGGVPLTVEEIL 401
NK+ G + EEIL
Sbjct: 363 NKVNGELIKPEEIL 376
>pir||H81399 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
Cj0536 [similarity] - Campylobacter jejuni (strain NCTC
11168) >gi|6968004|emb|CAB75172.1| (AL139075) OORA
subunit of 2-oxoglutarate:acceptor oxidoreductase
[Campylobacter jejuni]
Length = 374
Score = 282 bits (713), Expect = 6e-75
Identities = 148/367 (40%), Positives = 230/367 (62%), Gaps = 3/367 (0%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+ +A AI GC+F+ GYPITPSSEIA ++ LP G ++QMEDEI+ I+ +GA+
Sbjct: 8 GNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLPANDGTFIQMEDEISGISVAIGAA 67
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+G+K MTA+SGPG SL E +G A + E PLV+V+V R GPSTG T+ AQGD FQA+
Sbjct: 68 MSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIVNVMRGGPSTGLPTRVAQGDLFQAKA 127
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
THGD +AI+P S+E+A+ ETIRAFN+AE+ TPV +L D +GH + +PD ++
Sbjct: 128 PTHGDFASIAIAPASLEEAYTETIRAFNLAEKYMTPVFLLMDETVGHMNGKAVLPDLKDI 187
Query: 219 EIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHD 278
++ RK + +++ P+ + P F GY HVTG H + G +
Sbjct: 188 KVYNRKKFEGDKKDYKPYAAGENEPATLNPFF-TGYRYHVTGLHHGDIGF-PTEDGVIVK 245
Query: 279 KLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFV 338
K + R+ KI+ N+E YEEY DDAE L++++G +R + A+ + R++GIKVGLF
Sbjct: 246 KNMERLIGKIKNNQEDICTYEEYMLDDAEFLIIAYGSVSRSAKEAIQRLREQGIKVGLFR 305
Query: 339 PKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVE 398
P T++P +++ E+ K + ++V E+N+GQ + E++R + + +++ G P+T
Sbjct: 306 PITLYPVAEKKIAEVVSKFKKVMVSELNMGQYLEEIERVTSRRDFI-SLHRANGRPITPS 364
Query: 399 EILREIR 405
EI+ +++
Sbjct: 365 EIIAKVK 371
>gi|11498080 2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
>gi|6685587|sp|O29781|KORA_ARCFU 2-OXOGLUTARATE SYNTHASE
SUBUNIT KORA (2-KETOGLUTARATE OXIDOREDUCTASE ALPHA
CHAIN) (KOR) (2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE
ALPHA SUBUNIT) >gi|7433685|pir||E69308
2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain korA - Archaeoglobus fulgidus
>gi|2650159|gb|AAB90768.1| (AE001072) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA)
[Archaeoglobus fulgidus]
Length = 346
Score = 279 bits (706), Expect = 4e-74
Identities = 157/370 (42%), Positives = 224/370 (60%), Gaps = 31/370 (8%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVG 96
+ G+EA GAI AGC F+AGYPITPSSEIA MA LPK GG ++QMEDEIASI+A++G
Sbjct: 6 IQGNEAAVRGAINAGCNFFAGYPITPSSEIAHGMAELLPKFGGVFIQMEDEIASISAVIG 65
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
AS G MTATSGPGFSLMQE +GYA +TE+P+V+ +V R+GPSTG T +QGD QA
Sbjct: 66 ASMAGAVAMTATSGPGFSLMQEGMGYAAITESPVVIFNVMRAGPSTGIPTAPSQGDAMQA 125
Query: 157 RWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPD 216
R+G+HGD+PIV ++P SV+D ++ T+ AF +A R TPV+VL D I+GH RE + +P
Sbjct: 126 RYGSHGDYPIVVLAPASVKDMYYLTVEAFKIAFRFSTPVIVLSDEIVGHMRESVALPPLG 185
Query: 217 EVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEV 276
E+E Y K +N + R H TG H ENGL +E
Sbjct: 186 EIE-SYEKRAKNLIDGRR---------------------RHRTGLVHTENGLPTTDLEE- 222
Query: 277 HDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGL 336
++KL+R + K + R + + + +L V++G S R + + ++G+ G+
Sbjct: 223 YEKLLRLLFAKFDDFRPMVR-----FEGEEGVLFVAYGSSYRLAKSSAKLLAEKGVSAGI 277
Query: 337 FVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLT 396
+++ PFP + +R KK ++VPEMN GQ++ EV+R V KGV+ G + L
Sbjct: 278 LKLESLFPFPEDAVRRYSKKADLVVVPEMNAGQVVKEVERVCCCRV--KGVSYFGSLILP 335
Query: 397 VEEILREIRG 406
E+++ + G
Sbjct: 336 -EKLVEIVEG 344
>pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Helicobacter pylori (strain 26695)
>gi|2313707|gb|AAD07654.1| (AE000572) ferredoxin
oxidoreductase, alpha subunit [Helicobacter pylori
26695]
Length = 375
Score = 268 bits (677), Expect = 1e-70
Identities = 152/370 (41%), Positives = 224/370 (60%), Gaps = 7/370 (1%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+E VA AI GCRF+ GYPITPSS+I M+ LPK GG+++QMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGAS 67
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+G K MTA+SGPG SL E +GY+ M E PLV+ DV RSGPSTG T+ AQGD R
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLRH 127
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
HGD VA++P ++E+A+ ET+RAFN+AE L TPV +L D +GH +++IPD +EV
Sbjct: 128 PIHGDFKAVALAPANLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 219 E--IVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEV 276
+ + RK +++ P+G + P F GY HV+G H G ++
Sbjct: 188 QKMTINRKEFLGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGF-PTEDAKI 245
Query: 277 HDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEG-IKVG 335
L+ R+ KIE +++ + EE + AEI+V+++G + A+ KE KVG
Sbjct: 246 GGDLIDRLFNKIESKQDIINENEEMDLEGAEIVVIAYGSVSLAVKEALKDYHKESKQKVG 305
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
F PKT+ P P +R++E+G K ILV E+N GQ + E++R + V G + G +
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFLG--QANGRTI 363
Query: 396 TVEEILREIR 405
+ ++I+ +++
Sbjct: 364 SPKQIIAKLK 373
>pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacter pylori
(strain J99) >gi|4155084|gb|AAD06119.1| (AE001486)
SUBUNIT OF 2-OXOGLUTARATE OXIDOREDUCTASE [Helicobacter
pylori J99]
Length = 375
Score = 266 bits (673), Expect = 3e-70
Identities = 150/370 (40%), Positives = 223/370 (59%), Gaps = 7/370 (1%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+E VA AI GCRF+ GYPITPSS+I M+ LPK GG+++QMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGAS 67
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+G K MTA+SGPG SL E +GY+ M E PLV+ DV RSGPSTG T+ AQGD R
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLRH 127
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
HGD VA++P ++E+A+ ET+RAFN+AE L TPV +L D +GH +++IPD +EV
Sbjct: 128 PIHGDFKAVALAPANLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 219 E--IVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEV 276
+ + RK +++ P+G + P F GY HV+G H G ++
Sbjct: 188 QKMTINRKEFAGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGF-PTEDAKI 245
Query: 277 HDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEG-IKVG 335
L+ R+ KIE +++ + EE + EI+++++G + A+ KE KVG
Sbjct: 246 GGDLIDRLFHKIESKQDIINENEEMDLEGTEIVIIAYGSVSLAVKEALKDYNKESKQKVG 305
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
F PKT+ P P +R++E+G K ILV E+N GQ + E++R + V G + G +
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERVMQRKVHFFG--QANGRTI 363
Query: 396 TVEEILREIR 405
+ ++I+ +++
Sbjct: 364 SPKQIIAKLK 373
>gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:acceptor oxidoreductase
[Helicobacter pylori]
Length = 371
Score = 257 bits (649), Expect = 2e-67
Identities = 144/340 (42%), Positives = 206/340 (60%), Gaps = 5/340 (1%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+E VA AI GCRF+ GYPITPSS+I M+ LP GG+++QMEDEI+ I+ +GAS
Sbjct: 8 GNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPNCGGHFIQMEDEISGISVSLGAS 67
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+G K MTA+SGPG SL E +GY+ M E PLV+ DV RSGPSTG T+ QGD R
Sbjct: 68 MSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVDQGDVNFLRH 127
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
HGD VA++P S+E+A+ ET RAFN+AE L TPV +L D +GH +++IPD +EV
Sbjct: 128 PIHGDFKAVALAPASLEEAYTETARAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEV 187
Query: 219 E--IVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEV 276
+ + RK +++ P+G + P F GY HV+G H G ++
Sbjct: 188 QKTTINRKEFVGDKKDYKPYGVAQDEPAVLNPFF-KGYRYHVSGLHHGPIGF-PTEDAKI 245
Query: 277 HDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE-GIKVG 335
L+ R+ KIE +++ + EE + AEI+++++G + A+ KE KVG
Sbjct: 246 GGDLIDRLFNKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESNQKVG 305
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQ 375
F PKT+ P P +R++E+G K ILV E+N GQ + +++
Sbjct: 306 FFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLKKLK 345
>pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (strain MSB8)
>gi|4982338|gb|AAD36824.1|AE001814_6 (AE001814)
2-oxoisovalerate oxidoreductase, beta subunit, putative
[Thermotoga maritima]
Length = 356
Score = 246 bits (621), Expect = 4e-64
Identities = 150/380 (39%), Positives = 209/380 (54%), Gaps = 46/380 (12%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVG 96
M G+EA+A AI AGCR Y YPITP SEIAE MAR LP+VGG +LQ E EIA++ + G
Sbjct: 9 MKGNEAIAESAIRAGCRLYFAYPITPQSEIAEYMARRLPEVGGVFLQTESEIATVNMVYG 68
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
A+ TG +VMT+TS PGFSLMQE + Y E P V VDV R GP G + +QGD+FQA
Sbjct: 69 AACTGKRVMTSTSSPGFSLMQEGISYIAGAELPCVFVDVVRGGPGLGN-IQPSQGDYFQA 127
Query: 157 -RWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPD- 214
+ G HGD+ ++ ++P ++++A T AF++A+R R PV++L DG++G E + +P+
Sbjct: 128 VKGGGHGDYRLIVLAPSTLQEAVDLTQLAFDLADRYRNPVLILADGMIGQMMEPVELPEM 187
Query: 215 ------PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGL 268
PD + R E F + P+ L
Sbjct: 188 RDLSTLPDHSDWALRGARNREPHRIAAF------NIDPVGL------------------- 222
Query: 269 RDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKAR 328
+K+ +R+ K +++EEY D AE L+V +G R V R
Sbjct: 223 ---------EKMNKRLQEKYRLIEASEQRWEEYRVDGAEYLMVGYGTMGRILKSVVDSLR 273
Query: 329 KEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVN 388
+EGI GLF P T+ PFP R++EL KKV+ I V EM+ GQM+ +VQ V V +
Sbjct: 274 EEGIPAGLFRPVTLWPFPKRRLKELAKKVQLIFVVEMSSGQMVEDVQISVEGKVPVHFYG 333
Query: 389 KIGGVPLTVEEIL---REIR 405
++GGV T EEIL +E+R
Sbjct: 334 RMGGVVPTPEEILFAFKEVR 353
>dbj|BAB06093.1| (AP001515) pyruvate synthase alpha subunit [Bacillus halodurans]
Length = 579
Score = 204 bits (514), Expect = 1e-51
Identities = 125/374 (33%), Positives = 199/374 (52%), Gaps = 10/374 (2%)
Query: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMV 95
FM+G++A+ GA+ AG RF A YPITP+SEI E + ++LP+ GG +Q EDEIA+ +
Sbjct: 199 FMIGNDAIGMGAVAAGSRFMAAYPITPASEIMEYLIKKLPEFGGAVIQTEDEIAACTMAI 258
Query: 96 GASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ 155
GA++ G++ TA++GPG SLM E +G + MTETPLV+VD QR GPS G TK Q D
Sbjct: 259 GANYAGVRSFTASAGPGLSLMAEAIGLSGMTETPLVIVDTQRGGPSIGLPTKQEQSDLMA 318
Query: 156 ARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDP 215
+ THGD P V ++P +VE+AF++T+ AFN+AE + PV+++ D L ++ + D
Sbjct: 319 MIYSTHGDIPKVVMAPSTVEEAFYDTVEAFNIAEEYQCPVILVTDLALSLGKQTVEPLDF 378
Query: 216 DEVEIVYRKLPQNEEEARLPFGDPH------GDGVPPMPLFGH-GYFTHVTGSTHKENGL 268
+VEI L ++ G+ + GV P L G HVTG H + G
Sbjct: 379 SKVEIRRGSLQNEDQLTEQEKGEYYKRYELTETGVSPRVLPGQKNGIHHVTGVEHDQTGK 438
Query: 269 RDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYT--DDAEILVVSWGVSARPSLGAVLK 326
+++ +R+ RK+E E + + ++ ++LV+ + A+ +
Sbjct: 439 PSESATNRIEQMEKRL-RKVEALPERFPTPVHIHAPHEEPDLLVIGINSTRGAIEEAIPR 497
Query: 327 ARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKG 386
+ I+V + VHPFP ++ K + ++V E N + + + D ++
Sbjct: 498 LEADSIRVNHAHIRLVHPFPKHELQPYLTKAKKVVVVEHNATAQLASLIKMNCDVKAIEN 557
Query: 387 VNKIGGVPLTVEEI 400
V + G P EI
Sbjct: 558 VLRYDGNPFLPGEI 571
>sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT)
Length = 352
Score = 202 bits (509), Expect = 5e-51
Identities = 134/371 (36%), Positives = 200/371 (53%), Gaps = 32/371 (8%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+ AV GA++AGC Y GYPITP+SEI +R P VG ++Q E E A+I + GA+
Sbjct: 8 GNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVYGAA 67
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ-AR 157
G +VMTA+SGPG SL QE + + E P V+VDV R+GP G QGD+ Q +
Sbjct: 68 AAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGP-EQGDYNQIVK 126
Query: 158 WGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDE 217
G HG++ + ++P SV++ T+ AF +A++ R PVVVL D +LG E +R P+ +
Sbjct: 127 GGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYRNPVVVLTDAVLGQMAEPLRFPE-EA 185
Query: 218 VEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVH 277
VE H ++ S + + + +
Sbjct: 186 VE--------------------HRPDTSWAVCGNRETMKNLVTSIFLDFDELEEFNFYLQ 225
Query: 278 DKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLF 337
+K R IE+N +YEEY DDAEI++V++G+S+R + AV AR EGI VGL
Sbjct: 226 EKYAR-----IEENE---VRYEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLL 277
Query: 338 VPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTV 397
P T+ PFP +R+REL + EM+ GQM ++ R + ++ VN++GG + +
Sbjct: 278 RPITLFPFPSDRIRELADGGCRFISVEMSSGQMREDI-RMASGCRDVELVNRMGGNLIEL 336
Query: 398 EEILREIRGVA 408
++L +IR VA
Sbjct: 337 RDVLEKIREVA 347
>pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621790|gb|AAB85209.1| (AE000849) 2-oxoisovalerate
oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 202 bits (509), Expect = 5e-51
Identities = 134/371 (36%), Positives = 200/371 (53%), Gaps = 32/371 (8%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G+ AV GA++AGC Y GYPITP+SEI +R P VG ++Q E E A+I + GA+
Sbjct: 4 GNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPMVGRKFVQAESEEAAINMVYGAA 63
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQ-AR 157
G +VMTA+SGPG SL QE + + E P V+VDV R+GP G QGD+ Q +
Sbjct: 64 AAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGP-EQGDYNQIVK 122
Query: 158 WGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDE 217
G HG++ + ++P SV++ T+ AF +A++ R PVVVL D +LG E +R P+ +
Sbjct: 123 GGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYRNPVVVLTDAVLGQMAEPLRFPE-EA 181
Query: 218 VEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVH 277
VE H ++ S + + + +
Sbjct: 182 VE--------------------HRPDTSWAVCGNRETMKNLVTSIFLDFDELEEFNFYLQ 221
Query: 278 DKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLF 337
+K R IE+N +YEEY DDAEI++V++G+S+R + AV AR EGI VGL
Sbjct: 222 EKYAR-----IEENE---VRYEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLL 273
Query: 338 VPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTV 397
P T+ PFP +R+REL + EM+ GQM ++ R + ++ VN++GG + +
Sbjct: 274 RPITLFPFPSDRIRELADGGCRFISVEMSSGQMREDI-RMASGCRDVELVNRMGGNLIEL 332
Query: 398 EEILREIRGVA 408
++L +IR VA
Sbjct: 333 RDVLEKIREVA 343
>gb|AAG19013.1| (AE005001) pyruvate ferredoxin oxidoreductase, subunit alpha; PorA
[Halobacterium sp. NRC-1]
Length = 582
Score = 200 bits (504), Expect = 2e-50
Identities = 140/381 (36%), Positives = 199/381 (51%), Gaps = 22/381 (5%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
GDEA+ GAI AGCRFYAGYPITP++++ E + + + GG+ +Q EDE+A+I +GA+
Sbjct: 204 GDEAIGMGAIAAGCRFYAGYPITPATDVMEYLTGRIEQFGGHVVQAEDELAAINLALGAA 263
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
G + MTATSGPG LM E G +ETPLV+ +V RSGPSTG TK QGD
Sbjct: 264 RAGARSMTATSGPGIDLMSETFGLVATSETPLVIANVMRSGPSTGMPTKQEQGDLNMMLK 323
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIP---DP 215
G HG+ P ++P SV + F +T+ AFN+AE+ + PV V D + T E+ P D
Sbjct: 324 GGHGEIPRFVVAPTSVAECFHKTVEAFNLAEKYQLPVYVTADLSMAVT-ERTYPPEEFDM 382
Query: 216 DEVEIVYRKLP--------QNEEEARLPFGDPHGDGVPPMPLFGHGYFTHV-TGSTHKEN 266
D VEI KL QN+ E P D DG+ P + G H+ TG H E
Sbjct: 383 DAVEIERGKLVDEDEISAWQNDTEQFRPHADT-ADGISPRAVPGTEGGVHMSTGLEHDEL 441
Query: 267 GLRDVYTQEVHDKLVRRIHRKIEQNREVYE-KYEEYYTDDAEILVVSWGVSARPSLGAVL 325
G R T D++ +R +RK++ RE + Y E+ DA+ LVVSWG S ++ L
Sbjct: 442 GRRTEDTDVRVDQVDKR-YRKVDTAREREQFDYREFGDSDADNLVVSWG-SNEGTIVEAL 499
Query: 326 KARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVL-- 383
+ + V + +P + + + ++V E N +V + DVL
Sbjct: 500 EYLDGDDDPDIRVVSVPYIYPRPDLTDEVEAADDVVVVEANATGQFADV---IEHDVLER 556
Query: 384 LKGVNKIGGVPLTVEEILREI 404
+ +N GV +E+ EI
Sbjct: 557 VTRINNYTGVDFKADELAAEI 577
>pir||F70864 probable oxidoreductase alpha subunit - Mycobacterium tuberculosis
(strain H37RV) >gi|2791495|emb|CAA16032.1| (AL021246)
hypothetical protein Rv2455c [Mycobacterium
tuberculosis]
Length = 653
Score = 190 bits (477), Expect = 3e-47
Identities = 131/381 (34%), Positives = 193/381 (50%), Gaps = 13/381 (3%)
Query: 32 PGNYFMM-GDEAVAYGAIFAGCR-----FYAGYPITPSSEIAETMARELPKVGGYYLQME 85
PG Y + G+ A+AYG + AG YPITP+S+I +++ Q E
Sbjct: 248 PGEYRQISGNTALAYGIVVAGQLAGLPVVLGSYPITPASDILHELSKH-KNFNVVTFQAE 306
Query: 86 DEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQA 145
DEI I A +GA++ G +T+TSGPG SL E LG VMTE PL+++DVQR GPSTG
Sbjct: 307 DEIGGICAALGAAYGGALGVTSTSGPGISLKSEALGLGVMTELPLLVIDVQRGGPSTGLP 366
Query: 146 TKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGH 205
TK Q D QA +G +G+ P+ ++P S D F + A +A TPV++L DG + +
Sbjct: 367 TKTEQADLLQALYGRNGESPVAVLAPRSPADCFETALEAVRIAVSYHTPVILLSDGAIAN 426
Query: 206 TREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKE 265
E RIPD + + + + E + P+ + G H G
Sbjct: 427 GSEPWRIPDVNALPPIKHTFAKPGEPFQ-PYARDRETLARQFAIPGTPGLEHRIGGLEAA 485
Query: 266 NGLRDV-YTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAV 324
NG D+ Y HD +VR KI+ V + + T DAE+L++ WG S P A
Sbjct: 486 NGSGDISYEPTNHDLMVRLRQAKID-GIHVPDLEVDDPTGDAELLLIGWGSSYGPIGEAC 544
Query: 325 LKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLL 384
+AR+ G KV + ++PFP + E+ ++ ++ PE+NLGQ+ ++ DV
Sbjct: 545 RRARRRGTKVAHAHLRYLNPFPA-NLGEVLRRYPKVVAPELNLGQLAQVLRGKYLVDV-- 601
Query: 385 KGVNKIGGVPLTVEEILREIR 405
+ V K+ GV +EI R IR
Sbjct: 602 QSVTKVKGVSFLADEIGRFIR 622
>emb|CAB60189.1| (AL132824) putative oxidoreductase alpha-subunit [Streptomyces
coelicolor]
Length = 630
Score = 186 bits (468), Expect = 3e-46
Identities = 130/387 (33%), Positives = 200/387 (51%), Gaps = 24/387 (6%)
Query: 30 YKPGNYF-MMGDEAVAYGAIFAGCR-----FYAGYPITPSSEIAETMARELPKVGGYYLQ 83
+ PG Y + G+ A+AYG I A R F YPITP+S+I +++ G Q
Sbjct: 242 FPPGTYRNISGNLALAYGLIAASRRADLPLFLGSYPITPASDILHELSKH-KNFGVRTFQ 300
Query: 84 MEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTG 143
EDEIA I A +GA++ G +T TSGPG +L E +G AV E PL++VD+QR GPSTG
Sbjct: 301 AEDEIAGIGAALGAAFGGALAVTTTSGPGVALKSETIGLAVSLELPLLVVDIQRGGPSTG 360
Query: 144 QATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGIL 203
TK Q D QA +G +G+ P+ ++P + D F + A +A RTPV +L DG L
Sbjct: 361 LPTKTEQADLLQAMFGRNGEAPVAVLAPQTAADCFDAALEAARIALAYRTPVFLLSDGYL 420
Query: 204 GHTREQIRIPDPDEVEIVYRKLPQ-------NEEEARLPF-GDPHGDGVPPMPLFGHGYF 255
+ E RIP+PDE+ + + Q + E P+ DPH P + G
Sbjct: 421 ANGSEPWRIPEPDELPDLTVQFAQGPNHTLDDGSEVFWPYKRDPH-TLARPWAVPGTPGL 479
Query: 256 THVTGSTHKENGLRDV-YTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWG 314
H G K++G ++ Y HD +VR KI+ ++ D A LV+ WG
Sbjct: 480 EHRIGGIEKQDGTGNISYDPANHDFMVRTRQAKIDGITVPDLAVDD--PDGARTLVLGWG 537
Query: 315 VSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEV 374
+ P AV + RKE ++ + ++PFP + + ++ ++VPEMNLGQ+ +
Sbjct: 538 STYGPITAAVRRIRKEVGQIAQAHLRHLNPFPA-NLGAVLERYDKVVVPEMNLGQLATLI 596
Query: 375 Q-RFVNDDVLLKGVNKIGGVPLTVEEI 400
+ +++ D + N++ G+P E++
Sbjct: 597 RAKYLVD---AQSYNQVNGMPFKAEQL 620
>emb|CAC08296.1| (AL392148) putative oxidoreductase [Streptomyces coelicolor]
Length = 645
Score = 186 bits (468), Expect = 3e-46
Identities = 130/387 (33%), Positives = 200/387 (51%), Gaps = 24/387 (6%)
Query: 30 YKPGNYF-MMGDEAVAYGAIFAGCR-----FYAGYPITPSSEIAETMARELPKVGGYYLQ 83
+ PG Y + G+ A+AYG I A R F YPITP+S+I +++ G Q
Sbjct: 257 FPPGTYRNISGNLALAYGLIAASRRADLPLFLGSYPITPASDILHELSKH-KNFGVRTFQ 315
Query: 84 MEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTG 143
EDEIA I A +GA++ G +T TSGPG +L E +G AV E PL++VD+QR GPSTG
Sbjct: 316 AEDEIAGIGAALGAAFGGALAVTTTSGPGVALKSETIGLAVSLELPLLVVDIQRGGPSTG 375
Query: 144 QATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGIL 203
TK Q D QA +G +G+ P+ ++P + D F + A +A RTPV +L DG L
Sbjct: 376 LPTKTEQADLLQAMFGRNGEAPVAVLAPQTAADCFDAALEAARIALAYRTPVFLLSDGYL 435
Query: 204 GHTREQIRIPDPDEVEIVYRKLPQ-------NEEEARLPF-GDPHGDGVPPMPLFGHGYF 255
+ E RIP+PDE+ + + Q + E P+ DPH P + G
Sbjct: 436 ANGSEPWRIPEPDELPDLTVQFAQGPNHTLDDGSEVFWPYKRDPH-TLARPWAVPGTPGL 494
Query: 256 THVTGSTHKENGLRDV-YTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWG 314
H G K++G ++ Y HD +VR KI+ ++ D A LV+ WG
Sbjct: 495 EHRIGGIEKQDGTGNISYDPANHDFMVRTRQAKIDGITVPDLAVDD--PDGARTLVLGWG 552
Query: 315 VSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEV 374
+ P AV + RKE ++ + ++PFP + + ++ ++VPEMNLGQ+ +
Sbjct: 553 STYGPITAAVRRIRKEVGQIAQAHLRHLNPFPA-NLGAVLERYDKVVVPEMNLGQLATLI 611
Query: 375 Q-RFVNDDVLLKGVNKIGGVPLTVEEI 400
+ +++ D + N++ G+P E++
Sbjct: 612 RAKYLVD---AQSYNQVNGMPFKAEQL 635
>pir||A72519 probable 2-oxoacid--ferredoxin oxidoreductase alpha chain APE2126 -
Aeropyrum pernix (strain K1) >gi|5105825|dbj|BAA81137.1|
(AP000063) 644aa long hypothetical 2-oxoacid--ferredoxin
oxidoreductase alpha chain [Aeropyrum pernix]
Length = 644
Score = 180 bits (452), Expect = 3e-44
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 31 KPGNYFMM-GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMAR-ELPKVGGY------YL 82
K G Y + G++ VA G + G R+ A YPITP+S+ + + E K+ G L
Sbjct: 243 KSGEYVVASGNDVVAMGKVVGGVRYQAYYPITPASDESVLLEEFEGLKIDGESLGSIAIL 302
Query: 83 QMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPST 142
Q EDEIA++++++GA+ TG + TATSGPGFSLM E LG+A + P+V+ QR GPST
Sbjct: 303 QTEDEIAAVSSVIGAALTGARASTATSGPGFSLMVEALGWAGKNDVPMVITYYQRGGPST 362
Query: 143 GQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGI 202
G T+G+Q D + + +HG+ P + +S +AF++ I A+N+AER + PV+ L D
Sbjct: 363 GLPTRGSQSDLLFSLFASHGEFPRIILSSGDHLEAFYDAIEAYNLAERFQMPVIHLLDKF 422
Query: 203 LGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGD----PHGDGVPPMPLFGHGYFTHV 258
L + + PD + K+ + + + P G P + P+ G G T
Sbjct: 423 LANMVASVPFPDWKAI-----KIDRGKTLFKAPTGPFKRFPRDQPLADRPVLGSGAITWY 477
Query: 259 TGSTHKENGLRDVYTQEVHDKLV--RRIHRKIE-QNREVYEKYE-EYYTD-DAEILVVSW 313
TG + E G D ++ ++LV R +K+E +RE+ E + +YY D DAE+L+V W
Sbjct: 478 TGDENDEYGHID---EDPVNRLVMYERRWKKMEIADREIPEDFRVKYYGDEDAEVLLVGW 534
Query: 314 GVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKV---RAILVPEMNLGQ 369
G P+L A+ + R+ G+ + + P P R+ E+ + R I V LGQ
Sbjct: 535 GSVKIPALEAIERLREMGVNAAYLHLRMLSPLPKRRVSEVLSRFDADRVIAVEANYLGQ 593
>pir||S22396 pyruvate synthase (EC 1.2.7.1) alpha chain [validated] -
Halobacterium salinarum >gi|43498|emb|CAA45825.1|
(X64521) pyruvate synthase [Halobacterium halobium]
Length = 628
Score = 176 bits (442), Expect = 4e-43
Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 45/398 (11%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVG 96
M G A+AYGAI AGCRF +GYP+TP ++ M + LP +GG Q+EDEIA+ A VG
Sbjct: 223 MSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVEDEIAAAAMAVG 282
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
AS G K M+ +SG GF+LM E LG A MTETPLVL++ QR+GPSTG TK Q D
Sbjct: 283 ASHAGAKAMSGSSGGGFALMSEPLGLAEMTETPLVLLEAQRAGPSTGMPTKPEQADLEHV 342
Query: 157 RWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFD---------------- 200
+ + GD VA P ++ + +T AF +A + PV++L+D
Sbjct: 343 LYTSQGDSHRVAFGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSGEYRNVDASFFD 402
Query: 201 ----GILGHTREQIRIPD-PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYF 255
LG T + +IPD P + Y + + E DGV P + G
Sbjct: 403 REPAADLGTTLSEDQIPDAPHDPTGKYHRYQHDVE-----------DGVSPRTIPGQSGG 451
Query: 256 THV-TGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE------YYTDDAEI 308
++ +G+ H NG + E D V ++ R++++ + + +E Y +DA+I
Sbjct: 452 RYLASGNEHWPNG----HISEDTDNRVAQVERRLQKLAAIRDDLDERDQQTHYGDEDADI 507
Query: 309 LVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLG 368
+++WG AV + +G V + PFP R V +V EM+
Sbjct: 508 GLIAWGSQEGTVEEAVHRLNDDGNSVKALGISDLAPFPVAETRAFVDSVDEAIVVEMSST 567
Query: 369 QMILE-VQRFVND-DVLLKGVNKIGGVPLTVEEILREI 404
+ +Q+ V D L + K G P EI+ +
Sbjct: 568 KQFRGLIQKEVGDIGGKLSSLLKYNGNPFEPAEIVEAV 605
>gb|AAG19514.1| (AE005043) putative 2-ketoglutarate ferredoxin oxidoreductase
(alpha); KorA [Halobacterium sp. NRC-1]
Length = 640
Score = 176 bits (442), Expect = 4e-43
Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 45/398 (11%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVG 96
M G A+AYGAI AGCRF +GYP+TP ++ M + LP +GG Q+EDEIA+ A VG
Sbjct: 235 MSGSHAIAYGAIDAGCRFISGYPMTPWTDAFTIMTQLLPDMGGVSEQVEDEIAAAAMAVG 294
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
AS G K M+ +SG GF+LM E LG A MTETPLVL++ QR+GPSTG TK Q D
Sbjct: 295 ASHAGAKAMSGSSGGGFALMSEPLGLAEMTETPLVLLEAQRAGPSTGMPTKPEQADLEHV 354
Query: 157 RWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFD---------------- 200
+ + GD VA P ++ + +T AF +A + PV++L+D
Sbjct: 355 LYTSQGDSHRVAFGPKDPKECYEQTRTAFEIAYDYQIPVILLYDQKLSGEYRNVDASFFD 414
Query: 201 ----GILGHTREQIRIPD-PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYF 255
LG T + +IPD P + Y + + E DGV P + G
Sbjct: 415 REPAADLGTTLSEDQIPDAPHDPTGKYHRYQHDVE-----------DGVSPRTIPGQSGG 463
Query: 256 THV-TGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEE------YYTDDAEI 308
++ +G+ H NG + E D V ++ R++++ + + +E Y +DA+I
Sbjct: 464 RYLASGNEHWPNG----HISEDTDNRVAQVERRLQKLAAIRDDLDERDQQTHYGDEDADI 519
Query: 309 LVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLG 368
+++WG AV + +G V + PFP R V +V EM+
Sbjct: 520 GLIAWGSQEGTVEEAVHRLNDDGNSVKALGISDLAPFPVAETRAFVDSVDEAIVVEMSST 579
Query: 369 QMILE-VQRFVND-DVLLKGVNKIGGVPLTVEEILREI 404
+ +Q+ V D L + K G P EI+ +
Sbjct: 580 KQFRGLIQKEVGDIGGKLSSLLKYNGNPFEPAEIVEAV 617
>emb|CAC11904.1| (AL445065) probable 2-oxoacid ferredoxin oxidoreductase, alpha
chain [Thermoplasma acidophilum]
Length = 629
Score = 176 bits (442), Expect = 4e-43
Identities = 118/397 (29%), Positives = 193/397 (47%), Gaps = 18/397 (4%)
Query: 26 LRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETM------------ARE 73
L L P + G++A A G + G RF YPITP+S+ + T+ A
Sbjct: 222 LPALPTPRKLLLTGNDASALGKLLGGLRFQTYYPITPASDESTTIEEHQNIKWLDKEAAN 281
Query: 74 LPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLV 133
L K G +Q EDE++++ +G + TG++ TATSGPGFSLM E L +A M E PLV+
Sbjct: 282 LKKGGVVIVQTEDELSAVNMAIGGALTGVRSATATSGPGFSLMAEGLSFAGMDEVPLVVT 341
Query: 134 DVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRT 193
+R GPSTG T+ Q D A HG++P + S +V++ ++ +A N A + +
Sbjct: 342 FYERGGPSTGLPTRNGQSDLLFALNAGHGEYPRIVFSSGTVDECIYDAAKALNYAAKYQM 401
Query: 194 PVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHG 253
PV+ L D L +T + I D D ++I KL + ++ + + +GV P G
Sbjct: 402 PVIHLIDKNLANTLDLISKVDLDRIKIETVKLAKEGDDVK-RYDLNTDNGVSPYTTMGRN 460
Query: 254 YFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIE-QNRE--VYEKYEEYYTDDAEILV 310
F +TG H E G ++ D+++ + +K+E +RE + EK +A+I
Sbjct: 461 IF-WMTGDEHDELG-HVTEDSDIRDRMMEKRFKKLETADREIPIDEKAVLIGEKEADITF 518
Query: 311 VSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQM 370
V+WG P L + ++EGI L K PFP E ++ + ++ E N
Sbjct: 519 VTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQ 578
Query: 371 ILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGV 407
++ + + + K G +T +EIL+ + +
Sbjct: 579 AAQMIKLYTGIDIKNKILKYNGRHMTEDEILKSAKEI 615
>emb|CAC11404.1| (AL445063) probable pyruvate ferredoxin oxidoreductase, alpha
subunit [Thermoplasma acidophilum]
Length = 588
Score = 168 bits (420), Expect = 1e-40
Identities = 116/371 (31%), Positives = 184/371 (49%), Gaps = 16/371 (4%)
Query: 26 LRKLYKPGN--YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQ 83
L K +K G Y + G AVA GA+ G + Y YP+TP+S +A+ K G +
Sbjct: 195 LGKKFKFGKKKYMISGGMAVALGAVAGGLKMYVAYPMTPASSALHFLAQHAKKYGVFVKI 254
Query: 84 MEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTG 143
EDEI++I ++GA++ G++ MT +SG GF+LM E +G + MTE PLV+ + QR GPSTG
Sbjct: 255 PEDEISAINTVIGANYAGVRAMTGSSGGGFALMTEAVGLSGMTEVPLVIYEAQRPGPSTG 314
Query: 144 QATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGIL 203
TK QGD Q + GD P + +P +E+AF+ T A N+AE+ +TPV V+ D L
Sbjct: 315 LPTKTEQGDLNQVLGASQGDFPRIVFAPGDIEEAFYLTREAMNIAEKYQTPVFVMSDLYL 374
Query: 204 GHTREQIRIPDPD-EVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGH-GYFTHVTGS 261
+ I D + ++ R ++ R + G+ P + G G +
Sbjct: 375 AEHYDTIDSFDLNFNIDHGLRAKDNEQDYKRYLITE---TGISPRAIPGQPGNMHNEDSD 431
Query: 262 THKENGLRDVYTQEVHD-----KLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVS 316
H E G DV + V + K++++ RK++ E + Y DAE +++ WG +
Sbjct: 432 EHNEYG--DVVSDAVTNPQDRIKMMQKRMRKLDTYIEEMKPTPTYRIQDAEYVIIQWGST 489
Query: 317 ARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQM--ILEV 374
A+ R +GIK+G K V P + L + + + V GQ+ +
Sbjct: 490 KGAVEEAIDILRAKGIKIGAIEVKNVFPLNPDIGTLLKNRKKILAVENNYSGQLSKYIAA 549
Query: 375 QRFVNDDVLLK 385
Q V +++ K
Sbjct: 550 QFLVKPELITK 560
>pir||A72627 probable 2-oxoacid--ferredoxin oxidoreductase, alpha chain APE1473
- Aeropyrum pernix (strain K1)
>gi|5105157|dbj|BAA80471.1| (AP000061) 616aa long
hypothetical 2-oxoacid--ferredoxin oxidoreductase ,
alpha chain [Aeropyrum pernix]
Length = 616
Score = 167 bits (419), Expect = 2e-40
Identities = 127/393 (32%), Positives = 192/393 (48%), Gaps = 32/393 (8%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSE------------IAETMAREL--PKVGGYYLQM 84
G++ VA G I G YPITPSS+ I +A +L K+ +QM
Sbjct: 218 GNDLVAMGKIVGGLGVITYYPITPSSDEALYVEKHSYISIDGPLAEKLGYDKIAVAIVQM 277
Query: 85 EDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQ 144
EDE+ASI A++GA+ G + T TSGPGFSLM E + AV E P+V+ R+GPSTG
Sbjct: 278 EDELASINAVLGAAAAGARASTTTSGPGFSLMNEAVSLAVEAEIPVVVTLWMRAGPSTGM 337
Query: 145 ATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILG 204
T+ Q D + + HGD P + ++ +AF++ I+AFN AE +TPV+ L D L
Sbjct: 338 PTRTGQQDLLHSIFSGHGDAPKIVLASGDHVEAFYDAIKAFNWAEEFQTPVIHLLDKYLA 397
Query: 205 HT-----REQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVT 259
+ RE + DP +V I KL N + + DG+ P G +T
Sbjct: 398 SSMVSLAREDL---DPSKVPITRGKLLDNPPADYRRY-EVVEDGISPRARLGSATMV-IT 452
Query: 260 GSTHKENG--LRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSA 317
G H E G D +E+ R + IE+ EK + +A + +VS+G +
Sbjct: 453 GLEHDEYGYATEDPVMREIMMFKRERKFKVIEERIPDEEKAVLHGDSEASVALVSFGSTK 512
Query: 318 RPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN-LGQ--MILEV 374
+P L A+ R EG++ + ++PFPG + E+ + V +++ E N LGQ M+L
Sbjct: 513 QPILEALEMLRDEGVRARFAQVRLLYPFPGRLVEEMLEGVEKVIMVEQNLLGQLAMLLRA 572
Query: 375 QRFVNDDVLLKGVNKIGGVPLTVEEILREIRGV 407
+ D + KI G PL E+ ++ +
Sbjct: 573 HTSIKPD---SSIVKINGRPLYSFEVAGAVKRI 602
>gb|AAK42926.1| 2-oxoacid--ferredoxin oxidoreductase, alpha chain [Sulfolobus
solfataricus]
Length = 632
Score = 162 bits (407), Expect = 5e-39
Identities = 120/385 (31%), Positives = 182/385 (47%), Gaps = 17/385 (4%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSS------EIAETMARELPKVGG------YYLQMED 86
G+ A A G I+ G RF + YPITP+S E +T+ PK G +Q ED
Sbjct: 235 GNTAAAIGKIYGGLRFQSYYPITPASDESVFIEAHQTVFTVDPKTGEKRKSTIVVVQAED 294
Query: 87 EIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQAT 146
E+A+I GA+ TG++ TATSGPGFSLM E +G+A M E P+V+ R GPSTGQ T
Sbjct: 295 ELAAINMASGAALTGVRAATATSGPGFSLMVEGMGWAGMNEVPVVITYYIRGGPSTGQPT 354
Query: 147 KGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHT 206
+ +Q D A HG+ P + I+ +AF + A N+A++ +TPV+ L D L ++
Sbjct: 355 RTSQADLMFALNAGHGEFPRIVIASGDHVEAFHDGTWALNLAQKYQTPVIHLVDKALANS 414
Query: 207 REQI--RIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHK 264
I + + + I K+ N L + DG+ P G H TG H
Sbjct: 415 YSIIPKKTLGMENIRIEKGKIVINTNTPELKRFEITEDGISPFAPLGTAR-VHYTGDEHD 473
Query: 265 ENGLRDVYTQEVHDKLVRRIHRKIEQNREVYE--KYEEYYTDDAEILVVSWGVSARPSLG 322
E G ++ +RI + + ++E+ E + Y D+++ +++WG L
Sbjct: 474 EYGFIAEASENREKMYEKRIKKLMTADKEIPEESRVNVYGNTDSKVAIITWGSPKGAILD 533
Query: 323 AVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDV 382
A+ + EGIK L + PFP MR+L I+ E N EV +
Sbjct: 534 AMEELENEGIKPMLIQIRMFSPFPKNLMRKLLNGKEFIIDVESNYFGQAGEVLKLNTGIE 593
Query: 383 LLKGVNKIGGVPLTVEEILREIRGV 407
+ K G P+ +E+ I+ V
Sbjct: 594 PTHYILKWNGRPMMRDEVKEGIKAV 618
>pir||B72288 2-oxoacid ferredoxin oxidoreductase, alpha subunit - Thermotoga
maritima (strain MSB8)
>gi|4981713|gb|AAD36240.1|AE001773_9 (AE001773)
2-oxoacid ferredoxin oxidoreductase, alpha subunit
[Thermotoga maritima]
Length = 558
Score = 153 bits (382), Expect = 4e-36
Identities = 115/372 (30%), Positives = 184/372 (48%), Gaps = 14/372 (3%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G EAV GAI GC F + YP++PS+ + +A+ G Q EDEIA++ ++GA
Sbjct: 197 GAEAVGLGAIAGGCNFVSSYPMSPSTSVLVFLAQHKNDFGIVVEQAEDEIAAMNMIIGAW 256
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+ G + + TSG GF+LM+E L A M E+P V+ QR GP+TG T+ QGD A +
Sbjct: 257 YAGARGLVTTSGGGFALMEEALSLAGMIESPAVIHLAQRPGPATGLPTRTEQGDLNLALY 316
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
HGD P V +P +VE+AF+ T +AFNVA++ + PV VL D L + + D +E+
Sbjct: 317 AGHGDFPRVIYAPGNVEEAFYLTQKAFNVADKYQVPVFVLTDQYLVDSYYNLPGFDLNEL 376
Query: 219 EIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGY-FTHVTGSTHKENG-LRDVYTQEV 276
++ + + R + DG+ P + G+G V H E G + + + V
Sbjct: 377 KVEKHFIKTTRDYIRYAITE---DGISPRGIPGYGEGLVRVDSDEHDEFGHITEDFNTRV 433
Query: 277 HDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIK-VG 335
++V + RK E ++ K + ++ +L+V+WG + P +K EG+ V
Sbjct: 434 --RMVNKRLRKGETLKKEIVKPKLIGDENYRVLLVAWGSTLEP-----IKEAIEGLDGVA 486
Query: 336 LFVPKTVHPFPGERMRELGKKVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPL 395
L V P E + +K ++ E N + R V + + K G+
Sbjct: 487 LLHFSQVWPI-DESVATYFEKAEKVVAVEGNATGQFANLIRQVTGFHIKDRILKYNGLQF 545
Query: 396 TVEEILREIRGV 407
+VEE+ +I V
Sbjct: 546 SVEELKEKIAEV 557
>pir||G69170 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621610|gb|AAB85042.1| (AE000836)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 512
Score = 143 bits (357), Expect = 4e-33
Identities = 113/365 (30%), Positives = 173/365 (46%), Gaps = 17/365 (4%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G EAV G I GCRF + YP+TPS+ + ++ + + Q EDEIA+I +GAS
Sbjct: 153 GTEAVGIGCIAGGCRFMSSYPMTPSTPLQVFISENAAEFDMVFEQAEDEIAAINMCLGAS 212
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+ G + + ATSG GF+LM+E +G A M ETP+V+ QR GP+ G T+ AQ D A +
Sbjct: 213 YAGARSLVATSGSGFALMEEAVGLAGMIETPVVIYIGQRPGPAVGLPTRTAQEDLNLALY 272
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPDPDEV 218
G+ P ++P +EDA AFN+A+R + PV +L D L + P E
Sbjct: 273 AGPGEFPRAILAPGKLEDAPEIAAHAFNLADRYQIPVFLLSDQYLADLYYDLPSPQIGE- 331
Query: 219 EIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFT-HVTGSTHKENGLRDVYTQEVH 277
E Y E R F DG+ P + G+G T V H E GL +V
Sbjct: 332 EPSYHITRTWEGYRRFEF---TADGISPRGIPGYGSGTVRVDSDEHDEEGL-ITEDLDVR 387
Query: 278 DKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLF 337
++V + + ++E ++ K E Y D ++ WG + A+ G V +
Sbjct: 388 RRMVEKRNLRLEMLKDDTLKPEVY--GDNSSALICWGSTYWLVREAI---ESSGADVSMV 442
Query: 338 VPKTVHPFPGERMRELGKKVRAILVPEMNLGQM--ILEVQRFVNDDVLLKGVNKIGGVPL 395
V+P P + + L R +V GQ +L+++ F D+ + G+P
Sbjct: 443 HFSQVYPLPHDTLELLESFDRTAVVENNYRGQFADLLKLEGFEADE----RFRRYDGMPF 498
Query: 396 TVEEI 400
+VE +
Sbjct: 499 SVEGV 503
>pir||JC4919 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
[validated] - Sulfolobus sp. (strain 7)
>gi|1565183|dbj|BAA10898.1| (D64024)
2-oxoacid:ferredoxin oxidoreductase subunit alpha
[Sulfolobus sp. 7]
Length = 632
Score = 141 bits (351), Expect = 2e-32
Identities = 121/403 (30%), Positives = 197/403 (48%), Gaps = 38/403 (9%)
Query: 19 EPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSS------EIAETMAR 72
+P KE R +++ G+ AVA G I+ G RF + YPITP+S E + +
Sbjct: 221 KPSSKERRR-------FWLDGNTAVAIGKIYGGVRFQSYYPITPASDESVYIEAHQDVLM 273
Query: 73 ELPKVGG------YYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMT 126
E P G +Q EDE+A+I +GA+ TG++ TATSGPGFSLM E LG+A M
Sbjct: 274 EDPITGDKKKGTIVVVQAEDELAAINMAIGAALTGVRAATATSGPGFSLMVEGLGWAGMN 333
Query: 127 ETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFN 186
E P+V+ R GPSTG T+ AQ D + HG+ P + ++ +AF + I A N
Sbjct: 334 EVPVVITYYIRGGPSTGLPTRTAQSDLIFPIFAGHGEFPKIVLASGDHAEAFKDAIWALN 393
Query: 187 VAERLRTPVVVLFDGILGHTREQIRIP--DPDEVEIVYRKLPQNEEEA--RLPFGDPHGD 242
+AE+ +TPV+ L + L ++ I + D+++ K+ ++ + + R F + D
Sbjct: 394 LAEKYQTPVIHLVEKTLANSYSTIPYEELELDKLKAERGKIVESGDISYKRFKFTE---D 450
Query: 243 GVPPMPLFGHGYFTHVTGSTHKENG--LRDVYTQE-VHDKLVRRIHRKIEQNREVYEKYE 299
G+ P G + TG H E G DV + +++K ++++ ++ E
Sbjct: 451 GISPRAFLGKATM-YYTGDEHNEEGHISEDVVNRTMMYEKRMKKL--EVADKEIPEESRV 507
Query: 300 EYYTD-DAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVR 358
+ Y D ++ L+++WG S L +L+ + L + PFP + +L +
Sbjct: 508 KIYGDLNSRNLIITWG-SPTGVLRDILE--ESNFDFTLLQIRMFSPFPKNLVSKLMEGRD 564
Query: 359 AILVPEMN-LGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEI 400
I+ E N L Q L V+ + DV + K G P +E+
Sbjct: 565 KIITVEGNYLAQTSLLVKMYTGKDV-TNSILKWNGRPFLRDEL 606
>emb|CAA75641.1| (Y15464) ferredoxin oxidoreductase-like (gamma and alpha subunit in
fusion) [Thermus thermophilus]
Length = 617
Score = 138 bits (343), Expect = 2e-31
Identities = 127/412 (30%), Positives = 188/412 (44%), Gaps = 27/412 (6%)
Query: 9 KVVGMIIRGDEPEQKELLRKLYK-PGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIA 67
KV + R + P L L PG ++ G +A A G + G RF YPI+P+++ +
Sbjct: 205 KVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAAALGKLAGGLRFQTYYPISPATDES 264
Query: 68 ETMARE--LPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVM 125
+ LP +Q EDEIA++ VGA+ G K TATSGPGFSLM E LG+A M
Sbjct: 265 VFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAGAKAATATSGPGFSLMAEGLGFAGM 324
Query: 126 TETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAF 185
E PLV+ QR T+ QGD A G HG++P + ++ + DAF + +A
Sbjct: 325 IEAPLVVTLYQRGRAQHRLPTRTEQGDLMFAIRGGHGEYPRLVLASGDILDAFLDAQKAL 384
Query: 186 NVAERLRTPVVVLFDGILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGD-----PH 240
A R +T VV L D L + + P E V + R FG P
Sbjct: 385 AWAWRYQTVVVHLLDKFLASLAQSL----PKEALKVLSLDGEKRLSPREGFGPYQRYAPG 440
Query: 241 GDGVPP-MPLFGHGYFTHVTGSTHKENG--LRDVYTQEVHDKLVRRIHRKIEQNREVYEK 297
DG+ P +P+ G F +T H G DV +E+ ++ +R+ + +E+
Sbjct: 441 EDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELREL--QMEKRMEKLELARKEI--P 496
Query: 298 YEEYYT--DDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGK 355
E+ YT D E+LV+ WG G +L+A VG + + PFP R+ L +
Sbjct: 497 LEDQYTLFRDGEVLVLGWGTVK----GTLLEALDHLEGVGYLHLRLLWPFP--RIAPLLE 550
Query: 356 KVRAILVPEMNLGQMILEVQRFVNDDVLLKGVNKIGGVPLTVEEILREIRGV 407
+ V GQ+ VQ+ V + V G P +EE + ++ V
Sbjct: 551 GKTLVTVEHNYSGQLADLVQQETLKRVHHRVVKYNGRAPSPLEEAVEALKVV 602
>gi|11498355 2-oxoacid ferredoxin oxidoreductase, subunit alpha (orA)
[Archaeoglobus fulgidus] >gi|7433693|pir||E69343
2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha
chain orA - Archaeoglobus fulgidus
>gi|2649863|gb|AAB90491.1| (AE001053) 2-oxoacid
ferredoxin oxidoreductase, subunit alpha (orA)
[Archaeoglobus fulgidus]
Length = 532
Score = 123 bits (306), Expect = 3e-27
Identities = 97/314 (30%), Positives = 151/314 (47%), Gaps = 29/314 (9%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIASIAAMVGAS 98
G A+A G + AG +FY YP+TP+S I +A + V LQ E+EIA+I +G++
Sbjct: 184 GARAIAEGMLAAGLKFYYAYPMTPASPILHILAADSRCVA---LQPENEIAAIMMAIGSA 240
Query: 99 WTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARW 158
+ G + TSG GF+LM E++ A M E P++++ QRSGPSTG AT AQ D + A
Sbjct: 241 FGGERAAVGTSGGGFALMSESISLAGMAEVPVLIILAQRSGPSTGMATYTAQQDLYFALN 300
Query: 159 GTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQIRIPD--PD 216
HG+ P++ SP+++ED++ N+A + +TP ++L + + + ++
Sbjct: 301 PAHGEFPLIVASPITIEDSYRLAGELLNLAWQFQTPAILLTEKHITESLATAKLEGVVKR 360
Query: 217 EVEIVYRKLPQNEEEARLPFG-DPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQE 275
EVEI K + A G P+ PP + H E G E
Sbjct: 361 EVEIFREKGELFKRYAITESGISPY--AAPPA-------IFKANSNEHDEYGFA-TDDAE 410
Query: 276 VHDKLVRRIHRKIEQNREVYEKYEEY-YTDDAEILVVSWGVSARPSLGAVLKARKE-GIK 333
K+ + RK E+ R V Y + + +V+WG + GAV + +E G
Sbjct: 411 TATKMYAKRMRKEEEIRRVVANLNPYVVVKNGKDWIVTWG----SNFGAVKEVAEELGFS 466
Query: 334 VG-------LFVPK 340
V LF+PK
Sbjct: 467 VAAIRYMRPLFLPK 480
>pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain PAB1472 [similarity] - Pyrococcus abyssi
(strain Orsay) >gi|5458784|emb|CAB50271.1| (AJ248287)
KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (EC 1.-.-.-)
(VOR) [Pyrococcus abyssi]
Length = 395
Score = 113 bits (280), Expect = 4e-24
Identities = 98/349 (28%), Positives = 155/349 (44%), Gaps = 39/349 (11%)
Query: 30 YKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDE 87
YKP + G+ A AY + A + A YPITP + I E +A + + Y+ +E E
Sbjct: 4 YKPIKKVVSGNYAAAYAVLHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESE 63
Query: 88 IASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATK 147
+++AA +GAS TG +V TATS G +LM E L +A P+V+VDV R+ + +
Sbjct: 64 HSAMAACIGASATGARVFTATSAQGLALMHEMLHWAAGARLPIVMVDVNRA-MAPPWSVW 122
Query: 148 GAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDG-ILGHT 206
Q D R D + + ++ + + AF VAE + P +V+ IL HT
Sbjct: 123 DDQTDSLSQR-----DTGWMQFYAENNQEVYDGVLMAFKVAETVNVPAMVVESAFILSHT 177
Query: 207 REQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTH-------VT 259
E + +PQ + LP P PL+ F + T
Sbjct: 178 YE------------IVNMIPQELVDEFLP---------PRKPLYSLADFENPIAVGALAT 216
Query: 260 GSTHKENGLRDVYTQEVHDKLVRRIHRKIEQ--NREVYEKYEEYYTDDAEILVVSWGVSA 317
+ + E + E K+++ + R+ + R+ E E+ Y DDA+ + + G
Sbjct: 217 PADYYEFRYKLARAHEEAKKVIKDVGREFGERFGRDYSEMIEKAYIDDADFVFMGMGSLM 276
Query: 318 RPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN 366
AV RK+G KVG + PFP E + E+ + V+ I V + N
Sbjct: 277 GTVKEAVELLRKQGYKVGYAKVRWFRPFPREELLEIAESVKGIAVLDRN 325
>sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT) >gi|11280154|pir||T45085
2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain vorA - Pyrococcus furiosus
>gi|1197360|emb|CAA59502.1| (X85250) 2-ketovalerate
ferredoxin oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 394
Score = 109 bits (269), Expect = 7e-23
Identities = 96/349 (27%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 30 YKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDE 87
YKP + G+ A AY A+ A + A YPITP + I E +A + + Y+ +E E
Sbjct: 3 YKPIRKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESE 62
Query: 88 IASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATK 147
+++AA +GAS TG + TATS G +LM E L +A P+V+VDV R+ + +
Sbjct: 63 HSAMAACIGASATGARTFTATSAQGLALMHEMLHWAAGARLPIVMVDVNRA-MAPPWSVW 121
Query: 148 GAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDG-ILGHT 206
Q D R D + + ++ + + A+ VAE + P +V+ IL HT
Sbjct: 122 DDQTDSLSQR-----DTGWMQFYAENNQEVYDGVLMAYKVAETVNVPAMVVESAFILSHT 176
Query: 207 REQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTH-------VT 259
+ V +PQ + LP P PL+ F T
Sbjct: 177 YD------------VVEMIPQELVDEFLP---------PRKPLYSLANFDEPIAVGALAT 215
Query: 260 GSTHKENGLRDVYTQEVHDKLVRRIHRKIEQ--NREVYEKYEEYYTDDAEILVVSWGVSA 317
+ + E + E K+++ + ++ + R+ + E Y DDA+ + + G
Sbjct: 216 PNDYYEFRYKLAKAHEEAKKVIKEVGKEFGERFGRDYSQMIETGYIDDADFVFMGMGSLM 275
Query: 318 RPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN 366
AV RKEG KVG + PFP E + E+ + V+ I V + N
Sbjct: 276 GTVKEAVDLLRKEGYKVGYAKVRWFRPFPKEELVEIAESVKGIAVLDRN 324
>pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 - Pyrococcus
abyssi (strain Orsay) >gi|5458781|emb|CAB50268.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORA (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE ALPHA CHAIN) (POR) [Pyrococcus
abyssi]
Length = 395
Score = 108 bits (266), Expect = 2e-22
Identities = 102/337 (30%), Positives = 155/337 (45%), Gaps = 26/337 (7%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M +EA A+ A A + A +PITPS+ + E ++ + ++ ++++E E ++I+A+
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
VGAS G++ TAT+ G +LM E L A P+V+ R+ + Q
Sbjct: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
Q G + + ++A + A+ VAE R+ P +V FD IL HT E +
Sbjct: 127 QRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 212 IPDPDEVEIVYRKLPQNE-EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRD 270
IPD E+V L + E + A L P G P H EN +
Sbjct: 181 IPDQ---EVVDEFLGEYEPKHAYLDPKRPITQGTLAFP--AHYMEARYLVWEAMENARKV 235
Query: 271 VYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE 330
+ E + ++ RK Y+K EEY TDDAEI+ V+ G A V K R+E
Sbjct: 236 I--DEAFAEFEKKFGRK-------YQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREE 286
Query: 331 GIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL 367
G KVG PFP E +REL KK + + E ++
Sbjct: 287 GYKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDI 323
>pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit - Pyrococcus
horikoshii >gi|3257092|dbj|BAA29775.1| (AP000003) 398aa
long hypothetical ferredoxin oxidoreductase alpha-2
subunit [Pyrococcus horikoshii]
Length = 398
Score = 107 bits (265), Expect = 2e-22
Identities = 103/337 (30%), Positives = 153/337 (44%), Gaps = 26/337 (7%)
Query: 30 YKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDE 87
+ P M +EA A+ A A + A +PITPS+ + E ++ + ++ ++++E E
Sbjct: 3 FMPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESE 62
Query: 88 IASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATK 147
++I+A+VGAS G++ TAT+ G +LM E L A P+V+ RS +
Sbjct: 63 HSAISAVVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRSLSAPINIWN 122
Query: 148 GAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILG 204
Q Q G + + ++A + A+ VAE R+ P +V FD IL
Sbjct: 123 DWQDSISQRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILT 176
Query: 205 HTREQIRIPDPDEVEIVYRKLPQNE-EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTH 263
HT E + IPD E+V L + E + A L P G P V +
Sbjct: 177 HTVEPVEIPDQ---EVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEAKYLVWDAME 233
Query: 264 KENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGA 323
K + D E + +R RK Y+K EEY TDDAEI+ V+ G A
Sbjct: 234 KARKVID----EAFAEFEKRFGRK-------YQKIEEYKTDDAEIIFVTMGSLAGTLKDW 282
Query: 324 VLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAI 360
V K R+EG KVG PFP E +R L KK + +
Sbjct: 283 VDKKREEGYKVGAAKMTVYRPFPVEEIRALAKKAKVL 319
>sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT)
Length = 395
Score = 106 bits (263), Expect = 4e-22
Identities = 102/330 (30%), Positives = 151/330 (44%), Gaps = 26/330 (7%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M +EA A+ A A + A +PITPS+ + E ++ + ++ ++++E E ++I+A+
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAV 66
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
VGAS G++ TAT+ G +LM E L A P+V+ RS + Q
Sbjct: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRSLSAPINIWNDWQDSIS 126
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
Q G + + ++A + A+ VAE R+ P +V FD IL HT E +
Sbjct: 127 QRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 212 IPDPDEVEIVYRKLPQNE-EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRD 270
IPD E+V L + E + A L P G P V + K + D
Sbjct: 181 IPDQ---EVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEAKYLVWDAMEKARKVID 237
Query: 271 VYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE 330
E + +R RK Y+K EEY TDDAEI+ V+ G A V K R+E
Sbjct: 238 ----EAFAEFEKRFGRK-------YQKIEEYKTDDAEIIFVTMGSLAGTLKDWVDKKREE 286
Query: 331 GIKVGLFVPKTVHPFPGERMRELGKKVRAI 360
G KVG PFP E +R L KK + +
Sbjct: 287 GYKVGAAKMTVYRPFPVEEIRALAKKAKVL 316
>pir||A71114 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257088|dbj|BAA29771.1| (AP000003) 397aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 397
Score = 106 bits (262), Expect = 5e-22
Identities = 97/347 (27%), Positives = 158/347 (44%), Gaps = 29/347 (8%)
Query: 27 RKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQM 84
R Y P + G+ A AY A+ A + A YPITP + I E +A + + Y+ +
Sbjct: 3 RMEYNPIKKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPV 62
Query: 85 EDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQ 144
E E +++AA +GAS TG +V TATS G +LM E L +A + P+V+V+V R+ +
Sbjct: 63 ESEHSAMAACIGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNRA-MAPPW 121
Query: 145 ATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDG-IL 203
+ Q D R D + + ++ + + A+ VAE + P +++ IL
Sbjct: 122 SVWDDQTDSLSQR-----DTGWMQFYAENNQEVYDGVLMAYKVAETVNIPTMIIESAFIL 176
Query: 204 GHTREQIR-IPDPDEVEIVYRKLPQNEEEARL-PFGDPHGDGVPPMPLFGHGYFTHVTGS 261
HT E + IP E+V LP + L F +P G P + F +
Sbjct: 177 SHTYEVVNMIPQ----ELVDEFLPPRKPLYTLTDFENPIAVGALATPA-DYYEFRYKIAK 231
Query: 262 THKENGLRDVYTQEVHDKLVRRIHRKIEQ--NREVYEKYEEYYTDDAEILVVSWGVSARP 319
H+E K+++ + ++ + R+ + E Y +DA+ + + G
Sbjct: 232 AHEE-----------AKKVIKSVGKEFGERFGRDYSKMIETGYIEDADFVFMGMGSLMGT 280
Query: 320 SLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN 366
AV RKEG KVG + PFP E + E+ + V+ I V + N
Sbjct: 281 VKEAVDLLRKEGYKVGYAKVRWFRPFPKEELLEIAESVKGIAVLDRN 327
>sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 394
Score = 106 bits (261), Expect = 6e-22
Identities = 96/344 (27%), Positives = 157/344 (44%), Gaps = 29/344 (8%)
Query: 30 YKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDE 87
Y P + G+ A AY A+ A + A YPITP + I E +A + + Y+ +E E
Sbjct: 3 YNPIKKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESE 62
Query: 88 IASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATK 147
+++AA +GAS TG +V TATS G +LM E L +A + P+V+V+V R+ + +
Sbjct: 63 HSAMAACIGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNRA-MAPPWSVW 121
Query: 148 GAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDG-ILGHT 206
Q D R D + + ++ + + A+ VAE + P +++ IL HT
Sbjct: 122 DDQTDSLSQR-----DTGWMQFYAENNQEVYDGVLMAYKVAETVNIPTMIIESAFILSHT 176
Query: 207 REQIR-IPDPDEVEIVYRKLPQNEEEARL-PFGDPHGDGVPPMPLFGHGYFTHVTGSTHK 264
E + IP E+V LP + L F +P G P + F + H+
Sbjct: 177 YEVVNMIPQ----ELVDEFLPPRKPLYTLTDFENPIAVGALATPA-DYYEFRYKIAKAHE 231
Query: 265 ENGLRDVYTQEVHDKLVRRIHRKIEQ--NREVYEKYEEYYTDDAEILVVSWGVSARPSLG 322
E K+++ + ++ + R+ + E Y +DA+ + + G
Sbjct: 232 E-----------AKKVIKSVGKEFGERFGRDYSKMIETGYIEDADFVFMGMGSLMGTVKE 280
Query: 323 AVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN 366
AV RKEG KVG + PFP E + E+ + V+ I V + N
Sbjct: 281 AVDLLRKEGYKVGYAKVRWFRPFPKEELLEIAESVKGIAVLDRN 324
>dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase alpha subunit
[Hydrogenobacter thermophilus]
Length = 400
Score = 106 bits (261), Expect = 6e-22
Identities = 110/391 (28%), Positives = 170/391 (43%), Gaps = 54/391 (13%)
Query: 35 YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVG--GYYLQMEDEIASIA 92
+FM G EAV A YPITP SE A + EL G G Y + E E ++
Sbjct: 31 HFMTGSEAVKEAVKRASVDASVSYPITPQSEAAHLIG-ELWVEGYVGVYFRGESEFGVMS 89
Query: 93 AMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGD 152
+ G + G + +T TSGPG EN T P+ LV + R A Q D
Sbjct: 90 EIAGCALAGARTITTTSGPGTLRAMENFPMWAGTRIPVQLVLMARGV----NAPLSIQPD 145
Query: 153 FFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAER--LRTPVVVLFDGI-LGHTREQ 209
+ + D + + +D F + F VAE+ + PV+ + DG + HTRE
Sbjct: 146 NLEVSFLL--DTGCMIWYAETAQDLFDMILAGFVVAEQPDVHVPVITVVDGFFVSHTRET 203
Query: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLR 269
+ +P PD++ + P N A +P D VPP G F LR
Sbjct: 204 VMLP-PDDIALP----PYNPYRAPMPVIDAE---VPP------GRF------------LR 237
Query: 270 DVYTQE-------VHDKLVRRIHRKIEQNREVYEKY-----EEYYTDDAEILVVSWGVSA 317
D + + H + IE++R + Y E + +A+++ V+ G ++
Sbjct: 238 DPFVMKSNYISYATHASWQWEVRAAIERSRPYAKHYLRGLIEHFGDPEADLVFVACGTAS 297
Query: 318 RPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN-LGQMILEVQR 376
+ AV EGI + KT+ PFP E +RE K + I VPE N +G + EV+R
Sbjct: 298 AQAKEAVRMLEDEGISARVVKLKTIRPFPIEELREATKGAKYIFVPEFNVVGWLEREVRR 357
Query: 377 FV--NDDVLLKGVNKI-GGVPLTVEEILREI 404
++ + + G ++ GG+ + E I+RE+
Sbjct: 358 YLYGHSSAEIIGAPRVAGGMTMPAEVIVREV 388
>sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449945|pir||E69099 pyruvate synthase (EC
1.2.7.1) alpha chain - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622870|gb|AAB86209.1| (AE000929) pyruvate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 383
Score = 104 bits (256), Expect = 3e-21
Identities = 102/378 (26%), Positives = 172/378 (44%), Gaps = 37/378 (9%)
Query: 40 DEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAMVGA 97
++AVA A A + YPITP + I+E +A+ + ++ Y+++E E ++++A VGA
Sbjct: 9 NQAVAEAAKLAKPKVIPVYPITPQTSISEYLAKFVADGELKAEYIRVESEHSAMSACVGA 68
Query: 98 SWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQAR 157
S G++V TATS G +LM E + A P+V+ + R+ S + Q D R
Sbjct: 69 SGAGVRVFTATSSQGLALMHEIVYAAAGLRNPIVMANANRA-LSAPLSIWNDQQDSIAER 127
Query: 158 WGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIRIPD 214
D + I S ++A + ++ V+E + P +V DG IL HT E + IP
Sbjct: 128 -----DSGWMQIYVESGQEALDSVLLSYRVSEDRDVLLPSMVCLDGFILTHTVEPVDIPS 182
Query: 215 PDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQ 274
++V+ LP+ + + L +P G P Y+ K
Sbjct: 183 QEDVDSF---LPEFQPQVMLDPDEPMSLGTFTDP----DYYMEARYEVEK--------AM 227
Query: 275 EVHDKLVRRIHRKIEQ--NREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGI 332
E K++ R R+ + RE Y EEY +DAEI++V+ G + + R +G
Sbjct: 228 ERSRKIIERACREFSEMFGRE-YGLVEEYRCEDAEIILVAMGSVCSTLREVIDELRDKGK 286
Query: 333 KVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL-----GQMILEVQRFVNDDVLLKGV 387
VGL + PFP E ++ + + V + N+ G + E+ + D + +
Sbjct: 287 AVGLLKVRVHRPFPAEEIKSAVRNASKVAVLDKNITFSVGGALYTEISALLRDREVYGFI 346
Query: 388 NKIGG---VPLTVEEILR 402
+GG P +EEI+R
Sbjct: 347 VGLGGRDITPAHIEEIVR 364
>sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|11280155|pir||T45088 pyruvate synthase (EC
1.2.7.1) alpha-2 chain [imported] - Pyrococcus furiosus
>gi|1197363|emb|CAA59505.1| (X85250) pyruvate ferredoxin
oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 396
Score = 103 bits (255), Expect = 3e-21
Identities = 96/336 (28%), Positives = 155/336 (45%), Gaps = 24/336 (7%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M +EA A+ A A + A +PITPS+ I E ++ + ++ ++++E E ++I+A
Sbjct: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISAC 66
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
VGA+ G++ TAT+ G +LM E L A P+V+ R+ + Q
Sbjct: 67 VGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
Q G + + ++A + A+ VAE R+ P +V FD IL HT E +
Sbjct: 127 QRDTGW------MQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDV 271
IPD + V+ E E + + DP P+ + H S + +
Sbjct: 181 IPDQEVVDEFL-----GEYEPKHAYIDP----ARPITQGSLAFPAHYMESRYTVWEAME- 230
Query: 272 YTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEG 331
++V D+ +K + Y+K EEY T+DA+I+ V+ G A + K R+EG
Sbjct: 231 RAKKVIDEAFAEFEKKFGRK---YQKIEEYKTEDADIIFVTMGSLAGTLNEWIDKKREEG 287
Query: 332 IKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL 367
KVG PFP E +REL KK + + E N+
Sbjct: 288 YKVGAAKITVYRPFPVEEIRELAKKAKVLAFLEKNI 323
>gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-2) [Sulfolobus solfataricus]
Length = 400
Score = 100 bits (246), Expect = 4e-20
Identities = 102/385 (26%), Positives = 182/385 (46%), Gaps = 48/385 (12%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMA--RELPKVGGYYLQMEDEIASIAAMVG 96
G+EAVA G A YPITP + I E +A R ++ +++E E +++AA G
Sbjct: 8 GNEAVALGVKLARVGVTGIYPITPQTTIIEKLAEMRAKGEIETEIVRVESEHSAMAATFG 67
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
A+ G++ TAT+ G M E + + + P+V+V G GA +
Sbjct: 68 AALGGVRAFTATASQGLLYMHEMVWWVAGSRVPVVMV--------VGTRAVGAPWNI--- 116
Query: 157 RWGTHGDHP-------IVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHT 206
W H D I+A + + ++A T++AF ++E R+ P+++ DG IL HT
Sbjct: 117 -WNEHTDFTSERDSGWIMAFAS-NPQEALDLTLQAFRISEDERVFLPMMIGMDGFILSHT 174
Query: 207 REQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDG--VPPMPLFGHGYFTHVTGSTHK 264
+ + IPD D+V+ LP + + DP G G PP GY +
Sbjct: 175 KTNVLIPDQDQVDDF---LPPRRQPYVIDPEDPVGMGNIFPP-----EGYMR-----LRE 221
Query: 265 ENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAV 324
L +++V ++ R ++KI + Y +DA+ VV G A ++ AV
Sbjct: 222 SIDLALRNSEDVIKEIGREYNKKINPLGDYSTLNVSYKLEDADYAVVLMGAWAGDAMEAV 281
Query: 325 LKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL------GQMILEVQRFV 378
R++GIK+G+ + + P+ + +R K +A+LV + + G + +E++ +
Sbjct: 282 DTLREKGIKIGMLRIRYLRPWSEKEIRNTLKDKKAVLVLDRSTSFGRGGGPLYVEIKSTI 341
Query: 379 NDDV-LLKG-VNKIGGVPLTVEEIL 401
++ V +KG V+ +GGV + +++
Sbjct: 342 SNVVPQIKGVVSGLGGVTVNKNDLV 366
>emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin oxidoreductase
alpha-2 chain [Thermoplasma acidophilum]
Length = 402
Score = 98.7 bits (242), Expect = 1e-19
Identities = 93/351 (26%), Positives = 155/351 (43%), Gaps = 32/351 (9%)
Query: 15 IRGDEPEQKELLRKLYKPGNYFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMAREL 74
IRGD + R + M G++AVAYGA A +F + YPITP + I E +A +
Sbjct: 6 IRGDRMKSVNEFRTI-------MTGNDAVAYGAKLARVKFISAYPITPQTTIVEKLASMI 58
Query: 75 --PKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVL 132
++ Y+++E E +++AA+ + TG++ TATS G M E L + P+V+
Sbjct: 59 ANDELDAKYVEVESEHSALAAVFASELTGVRSYTATSSHGLLYMHEMLHWVAGQRLPIVM 118
Query: 133 VDVQRS-GPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAER- 190
V R+ GP Q D R D + + S ++A I + +AE
Sbjct: 119 SVVNRAIGPPWN--IWADQSDTINQR-----DTGWMQVYSESNQEAMDTIIMGYKIAENS 171
Query: 191 -LRTPVVVLFDG-ILGHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMP 248
+ P++ + D IL HT E + + D D +V LP + + R+ +P G G P
Sbjct: 172 GVMLPLMSMEDAFILSHTSEPVTMRDQD---LVNEYLPDLDLKFRIDPENPMGYGSYDTP 228
Query: 249 LFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEI 308
+ N R V +E ++ + E N E Y DDA+
Sbjct: 229 --DGSFMEFKKDMIDSMNNARKVIKEE-----TQKFNEMFETNYGAL--IERYRMDDADY 279
Query: 309 LVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRA 359
+++ G A + + + R+ G+ +GL + PFP + + E K V++
Sbjct: 280 AIIAMGTVASTARFVIDRLRENGLNIGLIRIRYFRPFPYDEILEDLKNVKS 330
>pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983615|gb|AAC07184.1| (AE000726) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 389
Score = 97.9 bits (240), Expect = 2e-19
Identities = 105/381 (27%), Positives = 163/381 (42%), Gaps = 39/381 (10%)
Query: 36 FMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGY---YLQMEDEIASIA 92
F+ G +A A A YPITP SE + + GY Y + E+E +++
Sbjct: 22 FITGSQAFAEAVKRANVDVAIAYPITPQSETMHLVGDLYAQ--GYVKDYYRAEEEYGAMS 79
Query: 93 AMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGD 152
A+ GA G + TATSGPG E + P VL + R A Q D
Sbjct: 80 AIAGAVRGGARAFTATSGPGLLRGLEAIVSWPGHRIPAVLGVMTR----VVNAPLSIQPD 135
Query: 153 FFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRT--PVVVLFDGI-LGHTREQ 209
+ + + +V + + +D F T+ F ++E++ PVVV +G + H +
Sbjct: 136 NVEISYLLNSG--LVVLHAENQQDVFDFTLAGFVISEKVDVYLPVVVATEGFFVTHAKGY 193
Query: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPP----MPLFGHGYFTHVTGSTHKE 265
+ +P E+ +LP DP+ VPP +P V S
Sbjct: 194 VELPP---------------EDMKLPPRDPYKAPVPPTDCEIPPARIQRDAPVQKSNFMS 238
Query: 266 NGLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVL 325
+ V+ QEV R + + E DAE+ VV+ G +A A
Sbjct: 239 YLIHAVWQQEVWSAN----RRAAKWIKHYLGGLIEVVNPDAEVFVVASGCAAAQGREAQR 294
Query: 326 KARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL-GQMILEVQRFV-NDDVL 383
A EG+ VGL K++ PFP + +RE K +A++VPE N+ G + EV+ + N ++
Sbjct: 295 YATMEGLNVGLIKVKSLRPFPVDEIREALKNAKAVIVPEHNIVGWLAKEVKAAIPNSGIV 354
Query: 384 LKGVNKIGGVPLTVEEILREI 404
+ G GG+ L VE I+ EI
Sbjct: 355 VDGPRVYGGMTLPVELIMEEI 375
>gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-1) [Sulfolobus solfataricus]
Length = 385
Score = 96.7 bits (237), Expect = 4e-19
Identities = 88/331 (26%), Positives = 153/331 (45%), Gaps = 25/331 (7%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
++G+ AVAY A + A +PITP + + E ++ + ++ +++E E +++A++
Sbjct: 11 LVGNHAVAYAVKQAKPKVLAVFPITPQTTMLEKLSEYISSEELKAELIKVESEHSALASI 70
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
GA+ G +V TATS G M E + +A P+V R+ Q DF
Sbjct: 71 YGAALAGARVFTATSSQGLLYMTEMIYWAGGQRVPIVAAVATRAIAEPWSIWDDHQ-DFV 129
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
R D + I +V++A+ TI+AF ++E R+ PV++ FDG IL HT E+I
Sbjct: 130 SKR-----DAIWIQIMAENVQEAYDMTIQAFRISEDERVILPVMMGFDGFILTHTMERIE 184
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDV 271
+ + +EV+ LP + + F DP G P Y + + G+ +
Sbjct: 185 VLEDNEVD---NFLPPRQFNL-IDFSDPIAIGPIATPEEYIKYRYEAMKAMERAKGVIEE 240
Query: 272 YTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEG 331
E R+ H +E Y +DA+ + V+ G + AV + R G
Sbjct: 241 IMGEYERISGRKQHGLVEC----------YKCEDAKYVFVTMGAWSGDGKAAVDRLRDSG 290
Query: 332 IKVGLFVPKTVHPFPGERMRELGKKVRAILV 362
+K GL + PFP E++ E + ++ ++V
Sbjct: 291 VKTGLLKIRVFRPFPKEKVEEYLRSMKGVVV 321
>gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit alpha (vorA)
[Archaeoglobus fulgidus] >gi|7449955|pir||D69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) alpha chain AF2053 [similarity] - Archaeoglobus
fulgidus >gi|2648476|gb|AAB89196.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
alpha (vorA) [Archaeoglobus fulgidus]
Length = 366
Score = 96.3 bits (236), Expect = 6e-19
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 71/383 (18%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
+ +EA+A A A YPITP S I E ++ + ++ ++++E E +++ +
Sbjct: 17 LTSNEAIAEAVKLAKPDVIAAYPITPQSPIVEKLSEMVDSGELDSRFVRVESEHSAMGVV 76
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
+GA+ G +V TATS G + M E +A + P+V+ RS
Sbjct: 77 IGAATAGARVFTATSSHGLAYMYEMCWWAAGSRLPIVMALAARS---------------I 121
Query: 155 QARWGTHGDHP----------IVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGI-L 203
A W HGDH I++++ + ++AF T+ AF ++E + PV V DG +
Sbjct: 122 GAPWNIHGDHLDLMAMRDLGWIISVAE-NAQEAFDMTLNAFMLSEEVNIPVAVAIDGFTM 180
Query: 204 GHTREQIRIPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTH 263
HT E + + EVEI P ++ R+ +P M +
Sbjct: 181 SHTAEVVEV---REVEI-----PPRKQAYRI---------LPGMDV-------------- 209
Query: 264 KENGLRDVYTQEVHDKLVRRIHRKIEQNREVYEK-----YEEYYTDDAEILVVSWGVSAR 318
L V E + + +E + E+ EK E Y +DA+ VV G +
Sbjct: 210 ---ALNAVTFGEARMTARYDLAKDLENSAELIEKEYGGLVERYRLEDADYAVVVTGGLSG 266
Query: 319 PSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL-GQMILEVQRF 377
AV R+EG+K+G+ K + PFP + ++ L +V + +L G + +EV
Sbjct: 267 DVKDAVDMLREEGVKMGVLRLKFIRPFPKKAVKSLPSQVLVVDRANTDLRGTLSVEVAAC 326
Query: 378 VNDDVLLKGVNKIGGVPLTVEEI 400
++V + V IGG TVEE+
Sbjct: 327 GVENVNV--VAGIGGRYPTVEEL 347
>gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alpha subunit [Methanococcus
maripaludis]
Length = 387
Score = 95.6 bits (234), Expect = 9e-19
Identities = 93/381 (24%), Positives = 161/381 (41%), Gaps = 42/381 (11%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAMVG 96
G A A A A A YPITP + E +A + ++ Y+++E E ++++A +G
Sbjct: 9 GTSAAAEAAKLADVDVIAAYPITPQTTCVEKLADFVANGELNAEYIKVESEHSAMSASIG 68
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQA 156
AS G + TATS G +LM E L A P+V+++ R+ + Q Q
Sbjct: 69 ASAAGARAFTATSSQGLALMHEVLFAAAGMRVPVVMMNANRALSAPINIWNDQQDSLSQR 128
Query: 157 RWGTHGDHPIVAISPVSVEDAFWETIRAFNVA--ERLRTPVVVLFDG-ILGHTREQIRIP 213
G + + ++ I+AF +A E++ PV+V DG IL HT E + +P
Sbjct: 129 DTGW------IQLYAEDNQEVLDLVIQAFKIAEDEKVLLPVMVNLDGFILTHTVEPVTLP 182
Query: 214 DPDEV-------EIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKEN 266
+ V E + L + + GDP+ + T T EN
Sbjct: 183 KQENVLDFIGTYEPKHAYLDPKKPMTQGALGDPN-----------YYMETRYAIETAMEN 231
Query: 267 GLRDVYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLK 326
+ + +VHD + +R E Y + AE ++V+ G +
Sbjct: 232 AKKVI--ADVHDAFAEKFNRAYGNG-----LIESYNLEKAENVIVAMGSICGTIKDMIDL 284
Query: 327 ARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPE------MNLGQMILEVQRFVND 380
+KEG+++GL + P P E +++ K + + + + MN G + +V + D
Sbjct: 285 KKKEGVEIGLLKIRCYRPLPIEMIKDALKNAKNVAILDKSISLGMNKGAIYADVASHLKD 344
Query: 381 DVLLKGVNKIGGVPLTVEEIL 401
+ + +GG +T E+IL
Sbjct: 345 KKTVNYIVGLGGRDITPEDIL 365
>pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983644|gb|AAC07211.1| (AE000728) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 404
Score = 94.4 bits (231), Expect = 2e-18
Identities = 106/392 (27%), Positives = 166/392 (42%), Gaps = 51/392 (13%)
Query: 35 YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVG--GYYLQMEDEIASIA 92
+F+ G EAV A A YPITP SE A M EL + G G Y + E E ++
Sbjct: 34 HFITGSEAVKEAAKRASVDASISYPITPQSEAAH-MLGELWREGYIGVYFRGESEFGVMS 92
Query: 93 AMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGD 152
+ G + G + +T TSGPG E + P+ LV + R S
Sbjct: 93 EVAGCAMAGARTITTTSGPGTMRAMEVFPMWAGSRLPIQLVLMARGINSPLSIQPDNLEI 152
Query: 153 FFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAER--LRTPVVVLFDGI-LGHTREQ 209
F G H A ++ F I F VAE+ + P++ DG + HTRE
Sbjct: 153 SFLLDTGCMVWHAETA------QELFDMIIAGFVVAEQPDVHVPIITAIDGFFISHTREA 206
Query: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGD---PHGDGVPPMPLFGHGYFTHVTGSTHKEN 266
+ +P P+++ + P N +A +P D P G + + Y ++ T
Sbjct: 207 VYLP-PEDIALP----PYNPYKAPMPPIDMEMPPGRFMRDPFVMKSNYISYAT------- 254
Query: 267 GLRDVYTQEVHDKLVRRIHRKIEQNREVYEKY-----EEYYTDDAEILVVSWGVSARPSL 321
H + IE++R + Y E + + E+L ++ G +A +
Sbjct: 255 ----------HASWQFEVRAAIERSRPYAKHYLRGLVEHFGDPEGEVLFIASGTAAAQAK 304
Query: 322 GAV-LKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMN-LGQMILEVQR--F 377
A + +EGIK + KT+ PFP E +RE K + I +PE N +G + EV+R +
Sbjct: 305 EATQILIHEEGIKARVLRLKTLRPFPTEEVREAVKGAKYIFIPEFNVVGWLEREVKRALY 364
Query: 378 VNDDVLLKGVNKIGG-----VPLTVEEILREI 404
D+ + G ++GG V+E+LR I
Sbjct: 365 GYTDIPIFGTPRVGGGMTMPPEFIVQEVLRLI 396
>pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicobacter pylori
(strain 26695) >gi|2314261|gb|AAD08154.1| (AE000617)
pyruvate ferredoxin oxidoreductase, alpha subunit
[Helicobacter pylori 26695]
Length = 407
Score = 94.0 bits (230), Expect = 3e-18
Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 31/330 (9%)
Query: 56 AGYPITPSSEIAETMA--RELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGF 113
A YPITPS+ I + ++ V G ++ +E E A+++A VGA+ G +V TATS G
Sbjct: 32 AAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSACVGAAAAGGRVSTATSSQGL 91
Query: 114 SLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVS 173
+LM E L A P+VL V R+ + G D + +R D +++ +
Sbjct: 92 ALMVEVLYQASGMRLPIVLNLVNRA-LAAPLNIHGDHSDMYLSR-----DSGWISLCTCN 145
Query: 174 VEDAFWETIRAFNVAE--RLRTPVVVLFDGIL-GHTREQIRIPDPDEVEIVYRKLPQNE- 229
++A+ T+ AF +AE ++R P +V DG L HT + +R P + Y+ + + +
Sbjct: 146 PQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSHTVQNVR---PLSDAVAYQFVGEYQT 202
Query: 230 EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIE 289
+ + L F P G + ++ H H V +EV + + R+
Sbjct: 203 KHSLLDFDKPVSYGAQAEEEW---HYEHKAQLHHAIMSASSVI-EEVFNDFAKLTGRQ-- 256
Query: 290 QNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGER 349
Y + + +DAEI + + G + ++ A + RK+GIK G+ ++ PFP ER
Sbjct: 257 -----YHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYER 311
Query: 350 MRELGKKVRAILV-----PEMNLGQMILEV 374
+ + K ++A+ + P +G M EV
Sbjct: 312 LGQDLKNLKALAILDKSSPAGTMGAMFNEV 341
>pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|4155626|gb|AAD06616.1| (AE001531) Pyruvate
ferrodoxin oxidoreductase [Helicobacter pylori J99]
Length = 407
Score = 93.2 bits (228), Expect = 5e-18
Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 31/330 (9%)
Query: 56 AGYPITPSSEIAETMA--RELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGF 113
A YPITPS+ I + ++ V G ++ +E E A+++A VGA+ G +V TATS G
Sbjct: 32 AAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSACVGAAAAGGRVSTATSSQGL 91
Query: 114 SLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVS 173
+LM E L A P+VL V R+ + G D + +R D +++ +
Sbjct: 92 ALMVEVLYQASGMRLPIVLNLVNRA-LAAPLNIHGDHSDMYLSR-----DSGWISLCTCN 145
Query: 174 VEDAFWETIRAFNVAE--RLRTPVVVLFDGIL-GHTREQIRIPDPDEVEIVYRKLPQNE- 229
++A+ T+ AF +AE ++R P +V DG L HT + +R P + Y+ + + +
Sbjct: 146 PQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSHTVQNVR---PLSDAVAYQFVGEYQT 202
Query: 230 EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIE 289
+ + L F P G + ++ H H V +EV + + R+
Sbjct: 203 KHSLLDFDKPVSYGAQAEEEW---HYEHKAQLHHAIMSASSVI-EEVFNDFAKLTGRQ-- 256
Query: 290 QNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGER 349
Y + + +DAEI + + G + ++ A + RK+GIK G+ ++ PFP ER
Sbjct: 257 -----YHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYER 311
Query: 350 MRELGKKVRAILV-----PEMNLGQMILEV 374
+ + K ++A+ + P +G M EV
Sbjct: 312 LGQDLKNLKALAILDKSSPAGAMGAMFNEV 341
>gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alpha subunit
[Helicobacter pylori]
Length = 396
Score = 91.7 bits (224), Expect = 1e-17
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 56 AGYPITPSSEIAETMA--RELPKVGGYYLQMEDEIASIAAMVGASWTGLKVMTATSGPGF 113
A YPITPS+ I + ++ + G ++ +E E A+++A VGA+ G +V TATS G
Sbjct: 32 AAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGGRVSTATSSQGL 91
Query: 114 SLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFFQARWGTHGDHPIVAISPVS 173
+LM E L A P+VL V R+ + G D + +R D +++ +
Sbjct: 92 ALMVEVLYQASGMRLPIVLNLVNRA-LAAPLNIHGDHSDMYLSR-----DSGWISLCTCN 145
Query: 174 VEDAFWETIRAFNVAE--RLRTPVVVLFDGIL-GHTREQIRIPDPDEVEIVYRKLPQNE- 229
++A+ T+ AF +AE ++R P +V DG L HT + +R P + Y+ + + +
Sbjct: 146 PQEAYDFTLMAFKIAEHQKVRVPTIVNQDGFLCSHTVQNVR---PLSDAVAYQFVGEYQT 202
Query: 230 EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDVYTQEVHDKLVRRIHRKIE 289
+ + L F P G ++ H H V +EV + + R+
Sbjct: 203 KHSLLDFDKPVSYGAQAEE---EWHYEHKAQLHHAIMSASSV-IEEVFNDFAKLTGRQ-- 256
Query: 290 QNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGER 349
Y + + +DAEI + + G + ++ A + RK+GIK G+ ++ PFP E+
Sbjct: 257 -----YHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYEK 311
Query: 350 MRELGKKVRAILV-----PEMNLGQMILEV 374
+ + K ++A+ + P +G M EV
Sbjct: 312 LGQDLKNLKALAILDKSSPAGAMGAMFNEV 341
>emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin oxidoreductase
[Thermotoga maritima]
>gi|4980501|gb|AAD35111.1|AE001690_5 (AE001690) pyruvate
ferredoxin oxidoreductase, alpha subunit [Thermotoga
maritima]
Length = 394
Score = 83.1 bits (202), Expect = 5e-15
Identities = 101/340 (29%), Positives = 150/340 (43%), Gaps = 32/340 (9%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPK--VGGYYLQMEDEIASIAAMVG 96
G EAVA A YPITP + I E AR + V + +E E ++++A+VG
Sbjct: 14 GAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFVADGVVRTEMIPVESEHSAMSAVVG 73
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQR--SGPSTGQATKGAQGDFF 154
A+ G + MTATS G +LM E + A P+V+ V R SGP D
Sbjct: 74 AAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPINIHCD---HSDAM 130
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAER--LRTPVVVLFDG-ILGHTREQIR 211
R D + + + ++A+ TI A +AE +R PV+V DG IL H E +
Sbjct: 131 AER-----DSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGVEPVE 185
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGD-PHGDGVPPMPLFGHGYFTHVTGSTHKENGLRD 270
PDE+ K E + P D H P+ L+ + YF H ++
Sbjct: 186 F-YPDELV----KKFVGELKPMYPLLDTEHPVTWGPLDLYDY-YFEHKRQQIEAMENVKK 239
Query: 271 VYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE 330
V+ E+ + RK Y E Y +DAE ++V+ G + V + R+E
Sbjct: 240 VF-PEIAKEFEETFGRK-------YWFVEPYRMEDAEHVMVALGSTNSTIKYVVDELREE 291
Query: 331 GIKVGLFVPKTVHPFPGERMREL--GKKVRAILVPEMNLG 368
G KVG PFP E+++EL G+K +L ++ G
Sbjct: 292 GYKVGSLKIWMFRPFPKEQLQELLNGRKSVVVLDRAVSFG 331
>sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449946|pir||C72427 pyruvate synthase (EC
1.2.7.1) alpha chain - Thermotoga maritima (strain MSB8)
Length = 392
Score = 83.1 bits (202), Expect = 5e-15
Identities = 101/340 (29%), Positives = 150/340 (43%), Gaps = 32/340 (9%)
Query: 39 GDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPK--VGGYYLQMEDEIASIAAMVG 96
G EAVA A YPITP + I E AR + V + +E E ++++A+VG
Sbjct: 12 GAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFVADGVVRTEMIPVESEHSAMSAVVG 71
Query: 97 ASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQR--SGPSTGQATKGAQGDFF 154
A+ G + MTATS G +LM E + A P+V+ V R SGP D
Sbjct: 72 AAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPINIHCD---HSDAM 128
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAER--LRTPVVVLFDG-ILGHTREQIR 211
R D + + + ++A+ TI A +AE +R PV+V DG IL H E +
Sbjct: 129 AER-----DSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGVEPVE 183
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGD-PHGDGVPPMPLFGHGYFTHVTGSTHKENGLRD 270
PDE+ K E + P D H P+ L+ + YF H ++
Sbjct: 184 F-YPDELV----KKFVGELKPMYPLLDTEHPVTWGPLDLYDY-YFEHKRQQIEAMENVKK 237
Query: 271 VYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE 330
V+ E+ + RK Y E Y +DAE ++V+ G + V + R+E
Sbjct: 238 VF-PEIAKEFEETFGRK-------YWFVEPYRMEDAEHVMVALGSTNSTIKYVVDELREE 289
Query: 331 GIKVGLFVPKTVHPFPGERMREL--GKKVRAILVPEMNLG 368
G KVG PFP E+++EL G+K +L ++ G
Sbjct: 290 GYKVGSLKIWMFRPFPKEQLQELLNGRKSVVVLDRAVSFG 329
>gb|AAD28766.1| (AF132216) 2-oxoisovalerate oxidoreductase beta subunit [Prevotella
albensis]
Length = 104
Score = 76.9 bits (186), Expect = 4e-13
Identities = 41/88 (46%), Positives = 54/88 (60%), Gaps = 2/88 (2%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M G+EA+A+ AI G + GYPITP SEI ET+A P G LQ E E+ASI +
Sbjct: 8 MKGNEAIAHAAIRCGADGFFGYPITPQSEIIETLALLKPWETTGMVVLQAESEVASINML 67
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGY 122
G + G +V+T +S PG +LMQE + Y
Sbjct: 68 YGGAGAGKRVLTTSSSPGVALMQEGIAY 95
>gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-like) [Sulfolobus solfataricus]
Length = 415
Score = 75.7 bits (183), Expect = 9e-13
Identities = 87/408 (21%), Positives = 169/408 (41%), Gaps = 69/408 (16%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M G +AVA+ A++A A YPI P +E+ +T+++ + ++ ++ E E +
Sbjct: 14 MNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFETV 73
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
AS G + + +SG G+ E + P+V + R+ G A D
Sbjct: 74 KHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPG-AYGVEHNDAL 132
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
R D + + + ++AF + A+ +AE R+ P+ + DG L H+ + +R
Sbjct: 133 MVR-----DVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVR 187
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDV 271
+P R+L +N F P+ G Y H + +
Sbjct: 188 LPP--------RELVKN-------FLPPYNRGK---------YLVHPDNPITVAPQVNED 223
Query: 272 YTQEV---HDKLVRRIHRKI----EQNREVYEKY---------------EEYYTDDAEIL 309
+ E+ H++ + R I E+ ++V+ +Y E Y DDAE++
Sbjct: 224 WVMEIRRQHEEAMERARSVIVEAYEEFKKVFGRYPGSTSDLQMPENPFVEPYMIDDAEVV 283
Query: 310 VVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEM---- 365
++ G ++P A+ R++G KVG+ + PFP + + R + V +
Sbjct: 284 LIGMGTVSKPMKVAIKNMRRQGYKVGMLRIRWFRPFPTQDVIRYLANSRVVCVIDRDYSM 343
Query: 366 ---NLGQMILEVQRFVNDDV-----LLKGVNKIGGVPLTVEEILREIR 405
N G +I R D+ ++ + +GG +T++++ + I+
Sbjct: 344 GSPNRGGVIYHEVRSSLYDLDQRPRVMNFIGGLGGREITIQDVEKIIK 391
>pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolobus
solfataricus >gi|1707735|emb|CAA69455.1| (Y08256)
pyruvate-ferredoxin oxidoreductase alpha-2 [Sulfolobus
solfataricus]
Length = 415
Score = 75.7 bits (183), Expect = 9e-13
Identities = 87/408 (21%), Positives = 169/408 (41%), Gaps = 69/408 (16%)
Query: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
M G +AVA+ A++A A YPI P +E+ +T+++ + ++ ++ E E +
Sbjct: 14 MNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFETV 73
Query: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
AS G + + +SG G+ E + P+V + R+ G A D
Sbjct: 74 KHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPG-AYGVEHNDAL 132
Query: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
R D + + + ++AF + A+ +AE R+ P+ + DG L H+ + +R
Sbjct: 133 MVR-----DVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVR 187
Query: 212 IPDPDEVEIVYRKLPQNEEEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDV 271
+P R+L +N F P+ G Y H + +
Sbjct: 188 LPP--------RELVKN-------FLPPYNRGK---------YLVHPDNPITVAPQVNED 223
Query: 272 YTQEV---HDKLVRRIHRKI----EQNREVYEKY---------------EEYYTDDAEIL 309
+ E+ H++ + R I E+ ++V+ +Y E Y DDAE++
Sbjct: 224 WVMEIRRQHEEAMERARSVIVEAYEEFKKVFGRYPGSTSDLQMPENPFVEPYMIDDAEVV 283
Query: 310 VVSWGVSARPSLGAVLKARKEGIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEM---- 365
++ G ++P A+ R++G KVG+ + PFP + + R + V +
Sbjct: 284 LIGMGTVSKPMKVAIKNMRRQGYKVGMLRIRWFRPFPTQDVIRYLANSRVVCVIDRDYSM 343
Query: 366 ---NLGQMILEVQRFVNDDV-----LLKGVNKIGGVPLTVEEILREIR 405
N G +I R D+ ++ + +GG +T++++ + I+
Sbjct: 344 GSPNRGGVIYHEVRSSLYDLDQRPRVMNFIGGLGGREITIQDVEKIIK 391
>pir||E75038 indolepyruvate ferredoxin oxidoreductase, chain alpha (iora-1)
PAB0855 - Pyrococcus abyssi (strain Orsay)
>gi|5458715|emb|CAB50202.1| (AJ248287) indolepyruvate
ferredoxin oxidoreductase, subunit alpha (iorA-1)
[Pyrococcus abyssi]
Length = 648
Score = 70.6 bits (170), Expect = 3e-11
Identities = 58/209 (27%), Positives = 92/209 (43%), Gaps = 17/209 (8%)
Query: 31 KPGN-YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIA 89
KPG ++G++A+ GA+ YA YP TPSSEI +TMA + G Y +E
Sbjct: 12 KPGERVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAAVASRAGVYMEYSTNEKV 71
Query: 90 SIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGA 149
+ + ASW GL+ MTA G ++ ++ LV V PS +++
Sbjct: 72 AFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGVNGGLVVVVADDPSM-WSSQNE 130
Query: 150 QGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQ 209
Q A++ I + P SV++A AF ++E+ V++ H R
Sbjct: 131 QDTRAIAKFAN-----IPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG- 184
Query: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGD 238
++V +LPQ +E + FGD
Sbjct: 185 ---------DVVLGELPQEIKEGKRKFGD 204
>sp|O58495|IORA_PYRHO INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (IOR) (INDOLEPYRUVATE
FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|7450338|pir||F71124 probable indolepyruvate
ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257173|dbj|BAA29856.1| (AP000003) 648aa
long hypothetical indolepyruvate ferredoxin
oxidoreductase alpha subunit [Pyrococcus horikoshii]
Length = 648
Score = 69.1 bits (166), Expect = 9e-11
Identities = 57/209 (27%), Positives = 92/209 (43%), Gaps = 17/209 (8%)
Query: 31 KPGN-YFMMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELPKVGGYYLQMEDEIA 89
KPG ++G++A+ GA+ YA YP TPSSEI +TMA K G Y +E
Sbjct: 12 KPGEKVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAMVAKKAGVYMEYSTNEKV 71
Query: 90 SIAAMVGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGA 149
+ + ASW GL+ MTA G ++ ++ L+ V PS +++
Sbjct: 72 AFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGINGGLIVVVADDPSM-WSSQNE 130
Query: 150 QGDFFQARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAERLRTPVVVLFDGILGHTREQ 209
Q A++ I + P SV++A AF ++E+ V++ H R
Sbjct: 131 QDTRAIAKFAN-----IPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRG- 184
Query: 210 IRIPDPDEVEIVYRKLPQNEEEARLPFGD 238
++V +LPQ +E + FG+
Sbjct: 185 ---------DVVLGELPQEIKEGKRKFGN 204
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165402996
Number of Sequences: 2977
Number of extensions: 7505885
Number of successful extensions: 15791
Number of sequences better than 1.0e-10: 60
Number of HSP's better than 0.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 15648
Number of HSP's gapped (non-prelim): 64
length of query: 408
length of database: 189,106,746
effective HSP length: 54
effective length of query: 354
effective length of database: 156,788,448
effective search space: 55503110592
effective search space used: 55503110592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)