BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2374 (gdh-like) DE:GLYCERATE DEHYDROGENASE
(335 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75057 glycerate dehydrogenase PAB2374 - Pyrococcus abyssi ... 670 0.0
pir||A71175 probable dehydrogenase - Pyrococcus horikoshii >gi|3... 610 e-174
pir||E72568 probable D-3-phosphoglycerate dehydrogenase APE1831 ... 385 e-106
dbj|BAB07033.1| (AP001518) glycerate dehydrogenase [Bacillus hal... 305 6e-82
pir||H70032 glycerate dehydrogenase homolog yvcT - Bacillus subt... 300 2e-80
emb|CAB08066.1| (Z94043) hypothetical protein [Bacillus subtilis] 276 3e-73
pir||B75120 phosphoglycerate dehydrogenase truncated homolog PAB... 268 6e-71
gb|AAD21956.1| (AF101234) unknown [Staphylococcus aureus] 266 2e-70
pir||D75067 probable dehydrogenase PAB1008 - Pyrococcus abyssi (... 265 4e-70
pir||E71011 probable phosphoglycerate dehydrogenase - Pyrococcus... 265 4e-70
pir||C83158 probable 2-hydroxyacid dehydrogenase PA3896 [importe... 261 1e-68
pir||C71165 probable dehydrogenase - Pyrococcus horikoshii >gi|3... 254 1e-66
gb|AAF51963.1| (AE003602) CG1236 gene product [Drosophila melano... 250 2e-65
sp|O27051|SERA_METTH D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 249 3e-65
sp|Q58424|SERA_METJA D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 246 3e-64
pir||F83362 probable 2-hydroxyacid dehydrogenase PA2263 [importe... 241 8e-63
gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo ... 233 3e-60
pir||S47774 hypothetical protein o365 - Escherichia coli >gi|466... 231 9e-60
pir||C65154 probable 2-hydroxyacid dehydrogenase in bisC-cspA in... 231 9e-60
sp|P37666|YIAE_ECOLI PROBABLE 2-HYDROXYACID DEHYDROGENASE IN BIS... 231 9e-60
pir||S48189 hydroxypyruvate reductase (EC 1.1.1.81) - Hyphomicro... 227 2e-58
gb|AAF09059.1|AC011717_26 (AC011717) putative D-isomer specific ... 218 7e-56
gb|AAF53930.1| (AE003668) CG9332 gene product [Drosophila melano... 217 2e-55
pir||B72257 D-3-phosphoglycerate dehydrogenase - Thermotoga mari... 215 4e-55
pir||T35831 probable D-3-phosphoglycerate dehydrogenase - Strept... 215 4e-55
sp|P36234|DHGY_HYPME GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYD... 211 8e-54
pir||A70464 D-3-phosphoglycerate dehydrogenase - Aquifex aeolicu... 210 2e-53
gi|11498419 phosphoglycerate dehydrogenase (serA) [Archaeoglobus... 209 3e-53
pdb|1GDH|A Chain A, D-Glycerate Dehydrogenase (Apo Form) (E.C.1.... 208 1e-52
pir||S68164 glycerate dehydrogenase (EC 1.1.1.29) splice form HP... 207 2e-52
pir||S68165 glycerate dehydrogenase (EC 1.1.1.29) splice form HP... 207 2e-52
pir||C72483 probable formate dehydrogenase APE2507 - Aeropyrum p... 206 3e-52
sp|O04130|SERA_ARATH D-3-PHOSPHOGLYCERATE DEHYDROGENASE PRECURSO... 206 3e-52
sp|P13443|DHGY_CUCSA GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYD... 205 5e-52
gb|AAF16561.1|AC012563_14 (AC012563) hydroxypyruvate reductase (... 205 6e-52
dbj|BAA19751.1| (D85339) hydroxypyruvate reductase [Arabidopsis ... 203 2e-51
sp|O33116|SERA_MYCLE D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 201 7e-51
sp|O53243|SERA_MYCTU D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 201 9e-51
pir||T05416 probable phosphoglycerate dehydrogenase (EC 1.1.1.95... 200 2e-50
dbj|BAA99698.1| (AB025624) phosphoglycerate dehydrogenase [Arabi... 200 2e-50
pir||A72390 hypothetical protein TM0327 - Thermotoga maritima (s... 199 3e-50
dbj|BAB05321.1| (AP001512) D-3-phosphoglycerate dehydrogenase [B... 198 8e-50
gi|11499368 2-hydroxyacid dehydrogenase, putative [Archaeoglobus... 198 1e-49
gb|AAC71709.1| (AF061070) PtxD [Pseudomonas stutzeri] 197 2e-49
sp|P73821|SERA_SYNY3 D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 196 4e-49
gb|AAF53929.1| (AE003668) CG9331 gene product [Drosophila melano... 193 3e-48
pir||C81362 phosphoglycerate dehydrogenase (EC 1.1.1.95) Cj0891c... 192 6e-48
pir||A75414 D-3-phosphoglycerate dehydrogenase - Deinococcus rad... 189 5e-47
sp|P35136|SERA_BACSU D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 188 9e-47
gb|AAF79644.1|AC025416_18 (AC025416) F5O11.29 [Arabidopsis thali... 185 5e-46
pir||T42743 hypothetical protein - fission yeast (Schizosaccharo... 181 9e-45
pir||T41705 probable 2-hydroxyacid dehydrogenase - fission yeast... 181 9e-45
emb|CAA21970.1| (AL033497) YNL274C homologue [Candida albicans] 181 9e-45
gb|AAF19554.1|AC005761_2 (AC005761) D-3-phosphoglycerate dehydro... 181 1e-44
gi|6324055 Ynl274cp [Saccharomyces cerevisiae] >gi|1730640|sp|P5... 179 5e-44
gb|AAB00105.1| (U01067) NADH-dependent hydroxypyruvate reductase... 178 6e-44
gi|5729974 phosphoglycerate dehydrogenase; 3-phosphoglycerate de... 178 6e-44
gi|11422415 phosphoglycerate dehydrogenase [Homo sapiens] 178 1e-43
sp|O08651|SERA_RAT D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi... 176 2e-43
pir||T19602 hypothetical protein C31C9.2 - Caenorhabditis elegan... 176 4e-43
emb|CAB61802.1| (AL133236) putative dehydrogenase [Streptomyces ... 170 2e-41
gb|AAG20511.1| (AE005123) phosphoglycerate dehydrogenase; SerA1 ... 169 3e-41
pir||G70363 D-lactate dehydrogenase - Aquifex aeolicus >gi|29833... 169 4e-41
pir||T00876 hypothetical protein F17K2.16 - Arabidopsis thaliana... 169 4e-41
pir||C70645 hypothetical protein Rv0728c - Mycobacterium tubercu... 169 5e-41
gi|6320925 3-phosphoglycerate dehydrogenase; Ser3p [Saccharomyce... 166 3e-40
pir||JC7190 D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) - human... 165 6e-40
emb|CAC11910.1| (AL445065) 2-hydroxyacid dehydrogenase related p... 165 6e-40
sp|Q61753|SERA_MOUSE D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) (... 165 8e-40
pir||E64569 phosphoglycerate dehydrogenase - Helicobacter pylori... 165 8e-40
pir||C71864 d-3-phosphoglycerate dehydrogenase - Helicobacter py... 165 8e-40
dbj|BAA13058.1| (D86240) unknown [Staphylococcus aureus] 162 4e-39
dbj|BAB12215.1| (AB032549) d-3-phosphoglycerate dehydrogenase [M... 162 5e-39
gb|AAF00955.1|AF183408_3 (AF183408) McyI [Microcystis aeruginosa] 162 7e-39
gb|AAG39286.1|AF113215_1 (AF113215) MSTP035 [Homo sapiens] 161 1e-38
gb|AAC46259.1| (AF006000) D-3-phosphoglycerate dehydrogenase hom... 160 2e-38
gb|AAF53080.1| (AE003631) CG6287 gene product [Drosophila melano... 159 6e-38
gb|AAK41187.1| D-3-phosphoglycerate dehydrogenase (serA-1) [Sulf... 157 1e-37
sp|Q59516|DHGY_METEX GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYD... 156 3e-37
gi|6322116 3-phosphoglycerate dehydrogenase; Ser33p [Saccharomyc... 155 7e-37
sp|P87228|SERA_SCHPO PUTATIVE D-3-PHOSPHOGLYCERATE DEHYDROGENASE... 153 3e-36
gb|AAD41370.1|AF152006_1 (AF152006) Tcf-3 co-repressor CtBP [Xen... 151 1e-35
sp|P43885|SERA_HAEIN D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 150 2e-35
dbj|BAA77337.1| (AB019533) Nad-dependent formate dehydrogenase [... 150 2e-35
pir||F69895 phosphoglycerate dehydrogenase homolog yoaD - Bacill... 150 3e-35
sp|P30799|DDH_ZYMMO 2-HYDROXYACID DEHYDROGENASE HOMOLOG >gi|5387... 149 4e-35
sp|P44501|DDH_HAEIN 2-HYDROXYACID DEHYDROGENASE HOMOLOG >gi|1073... 148 8e-35
pir||D83529 D-lactate dehydrogenase (fermentative) PA0927 [impor... 148 8e-35
gi|4557497 C-terminal binding protein 1 [Homo sapiens] >gi|11436... 148 1e-34
gi|4557499 C-terminal binding protein 2 [Homo sapiens] >gi|11432... 147 1e-34
sp|O88712|CTB1_MOUSE C-TERMINAL BINDING PROTEIN 1 >gi|3452507|em... 147 1e-34
gi|7304989 C-terminal binding protein 1 [Mus musculus] >gi|60154... 147 1e-34
gi|6753548 C-terminal binding protein 2 [Mus musculus] >gi|35135... 147 2e-34
pir||C82072 D-3-phosphoglycerate dehydrogenase VC2481 [imported]... 147 2e-34
gi|9506527 C-terminal binding protein 1 [Rattus norvegicus] >gi|... 146 2e-34
gi|9631622 contains D-isomer specific 2-hydroxyacid dehydrogenas... 145 6e-34
dbj|BAA36181.1| (D88272) formate dehydrogenase [Hordeum vulgare] 145 6e-34
gb|AAD14596.1| (AF091554) C-terminal binding protein [Xenopus la... 145 7e-34
sp|P56546|CTB2_MOUSE C-TERMINAL BINDING PROTEIN 2 >gi|2909779|gb... 145 1e-33
pir||S75499 D-isomer specific 2-hydroxyacid dehydrogenase family... 144 2e-33
pir||T51423 formate dehydrogenase (FDH) - Arabidopsis thaliana >... 143 4e-33
pir||F82068 2-hydroxyacid dehydrogenase family protein VC2504 [i... 143 4e-33
pir||C83607 D-3-phosphoglycerate dehydrogenase PA0316 [imported]... 143 4e-33
pir||T35499 probable D-lactate dehydrogenase - Streptomyces coel... 141 1e-32
dbj|BAA25287.1| (AB011840) CtBP [Drosophila melanogaster] 140 2e-32
sp|P08328|SERA_ECOLI D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >... 139 3e-32
pdb|1PSD|A Chain A, D-3-Phosphoglycerate Dehydrogenase (Phosphog... 139 3e-32
pir||C81380 probable D-2-hydroxyacid dehydrogenase Cj0373 [impor... 139 3e-32
emb|CAA12074.1| (AJ224690) C-terminal binding protein [Drosophil... 139 5e-32
gb|AAF54891.1| (AE003698) CtBP gene product [alt 2] [Drosophila ... 139 5e-32
sp|Q07511|FDH_SOLTU MITOCHONDRIAL FORMATE DEHYDROGENASE PRECURSO... 138 7e-32
pir||F82022 probable glycerate dehydrogenase (EC 1.1.1.29) NMA02... 138 7e-32
pir||H81245 glycerate dehydrogenase NMB0029 [imported] - Neisser... 138 1e-31
pir||B82587 D-3-phosphoglycerate dehydrogenase XF2206 [imported]... 138 1e-31
dbj|BAB04668.1| (AP001510) D-3-phosphoglycerate dehydrogenase [B... 138 1e-31
sp|P45250|YF56_HAEIN PUTATIVE 2-HYDROXYACID DEHYDROGENASE HI1556... 137 2e-31
pir||S45534 phosphoglycerate dehydrogenase (EC 1.1.1.95) - Bacil... 136 5e-31
gb|AAD19834.1| (AF060799) D-lactate dehydrogenase [Amycolatopsis... 135 6e-31
pir||F83066 glycerate dehydrogenase PA4626 [imported] - Pseudomo... 135 6e-31
sp|Q05709|VANH_ENTFC D-SPECIFIC ALPHA-KETO ACID DEHYDROGENASE (V... 134 2e-30
sp|Q59642|LDHD_PEDAC D-LACTATE DEHYDROGENASE (D-LDH) >gi|897794|... 134 2e-30
sp|P52643|LDHD_ECOLI D-LACTATE DEHYDROGENASE (D-LDH) >gi|7431359... 134 2e-30
pir||S76782 D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) - Synec... 134 2e-30
pir||T50134 2-hydroxyacid dehydrogenase [imported] - fission yea... 133 2e-30
pir||A82490 D-lactate dehydrogenase VCA0192 [imported] - Vibrio ... 133 3e-30
emb|CAA73696.1| (Y13245) NAD-dependent formate dehydrogenase [Mo... 132 5e-30
gb|AAB36206.1| NAD(+)-dependent formate dehydrogenase, McFDH {EC... 131 1e-29
gb|AAC28494.1| (AF079881) D-3-phosphoglycerate dehydrogenase [En... 130 3e-29
pdb|2NAD|A Chain A, Nad-Dependent Formate Dehydrogenase (E.C.1.2... 129 4e-29
sp|P33160|FDH_PSESR FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE... 129 4e-29
gb|AAF36802.1|AF155139_1 (AF155139) putative lactate dehydrogena... 129 4e-29
pir||DELBC D-2-hydroxyisocaproate dehydrogenase (EC 1.1.1.-) - L... 128 8e-29
sp|P17584|DHD2_LACCA D-2-HYDROXYISOCAPROATE DEHYDROGENASE (D-HIC... 128 8e-29
pir||D71373 probable D-specific D-2-hydroxyacid dehydrogenase - ... 128 8e-29
gb|AAC23583.1| (U82965) D-lactate dehydrogenase [Streptomyces to... 127 1e-28
pir||JU0334 formate dehydrogenase (EC 1.2.1.2) - Pseudomonas sp 127 2e-28
gb|AAD51414.1|AF171236_1 (AF171236) 3-phosphoglycerate dehydroge... 127 2e-28
pir||H64531 phosphoglycerate dehydrogenase - Helicobacter pylori... 126 3e-28
gb|AAG21503.1|AC067754_18 (AC067754) phosphoglycerate dehydrogen... 126 4e-28
pir||S51787 D-2-hydroxyisocaproate dehydrogenase (EC 1.1.1.-) - ... 124 1e-27
gb|AAC99363.1| (AF071558) D-lactate dehydrogenase [Lactobacillus... 124 1e-27
pir||G71974 probable keto-acid dehydrogenase - Helicobacter pylo... 123 2e-27
pir||S48145 D-hydroxyisocaproate dehydrogenase - Lactobacillus d... 123 3e-27
gb|AAB17663.1| (U31175) D-specific D-2-hydroxyacid dehydrogenase... 123 4e-27
emb|CAA42781.1| (X60220) D-lactate dehydrogenase [Lactobacillus... 122 6e-27
emb|CAB92262.1| (AL356595) putative 2-hydroxyacid dehydrogenase ... 121 1e-26
emb|CAC11987.1| (AL445065) glycerate dehydrogenase related prote... 120 2e-26
sp|P30901|LDHD_LACHE D-LACTATE DEHYDROGENASE (D-LDH) >gi|478777|... 120 2e-26
prf||2124425A CtBP protein [Rattus norvegicus] 120 2e-26
sp|P26297|LDHD_LACDE D-LACTATE DEHYDROGENASE (D-LDH) >gi|538959|... 118 9e-26
gi|6324964 similar to formate dehydrogenases; Fdh1p [Saccharomyc... 115 6e-25
pir||C82118 erythronate-4-phosphate dehydrogenase VC2108 [import... 115 6e-25
dbj|BAA14985.1| (D90775) D-lactate dehydrogenase (EC 1.1.1.28) (... 115 1e-24
pir||T39682 probable glycerate-and formate-dehydrogenase - fissi... 114 2e-24
emb|CAA21922.2| (AL033389) putative glycerate-and formate-dehydr... 114 2e-24
pir||D82435 D-3-phosphoglycerate dehydrogenase-related protein V... 112 5e-24
sp|P45637|YPRA_CORGL HYPOTHETICAL 33.0 KD PROTEIN IN PROB-PROA I... 111 1e-23
gb|AAD23831.1|AF123482_1 (AF123482) NAD-dependent formate dehydr... 111 1e-23
gb|AAG18731.1| (AE004977) phosphoglycerate dehydrogenase; SerA3 ... 110 3e-23
pir||T34290 hypothetical protein F49E10.5 - Caenorhabditis elega... 109 4e-23
sp|P51011|LDHD_LEUMC D-LACTATE DEHYDROGENASE (D-LDH) >gi|508506|... 109 6e-23
sp|Q07103|FDH_NEUCR FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE... 108 8e-23
emb|CAC04225.1| (AL391515) putative dehydrogenase [Streptomyces ... 103 3e-21
sp|Q03134|FDH_EMENI PROBABLE FORMATE DEHYDROGENASE (NAD-DEPENDEN... 102 4e-21
pdb|1QP8|A Chain A, Crystal Structure Of A Putative Formate Dehy... 102 4e-21
emb|CAA09466.2| (AJ011046) formate dehydrogenase [Candida boidinii] 102 8e-21
pir||C83473 erythronate-4-phosphate dehydrogenase PA1375 [import... 100 3e-20
sp|P33677|FDH_PICAN FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE... 99 5e-20
pir||T35826 probable dehydrogenase - Streptomyces coelicolor >gi... 98 2e-19
pir||D75365 probable 2-hydroxyacid dehydrogenase - Deinococcus r... 87 2e-16
gb|AAF27940.1|AC005767_1 (AC005767) D-3-phosphoglycerate dehydro... 82 9e-15
>pir||B75057 glycerate dehydrogenase PAB2374 - Pyrococcus abyssi (strain Orsay)
>gi|5458864|emb|CAB50351.1| (AJ248287) GLYCERATE
DEHYDROGENASE [Pyrococcus abyssi]
Length = 335
Score = 670 bits (1711), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR
Sbjct: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL
Sbjct: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY
Sbjct: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV
Sbjct: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG
Sbjct: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGFQ 335
MAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGFQ
Sbjct: 301 MAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGFQ 335
>pir||A71175 probable dehydrogenase - Pyrococcus horikoshii
>gi|3257003|dbj|BAA29686.1| (AP000002) 376aa long
hypothetical dehydrogenase [Pyrococcus horikoshii]
Length = 376
Score = 610 bits (1556), Expect = e-174
Identities = 293/333 (87%), Positives = 323/333 (96%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KP+VFITREIPEVGI+MLE EFEVEVW DE+EIPREILL+KVK+VDALVTMLSERID+EV
Sbjct: 44 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEV 103
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
FE AP+LRIVANYAVGYDNID+EEATKRGIYVTNTP VLTDATADLAFALLLATARH+VK
Sbjct: 104 FENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVK 163
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSR 182
GD+F RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIG GRIGQAIAKRA+GF+MRILYYSR
Sbjct: 164 GDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSR 223
Query: 183 TRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVAR 242
TRK EVE+ELNAEFKPL++LLRESDFVVLAVPL +ETYH+INEERLK+MK+TAILIN+AR
Sbjct: 224 TRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR 283
Query: 243 GKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMA 302
GKV+DT AL+KALKEGWIAGAGLDV+EEEPYYNEELF LDNVVLTPHIGSA+FGAREGMA
Sbjct: 284 GKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMA 343
Query: 303 KLVAENLIAFKRGEVPPTLVNREVLKVRKPGFQ 335
+LVA+NLIAFKRGE+PPTLVNREV+K+RKPGF+
Sbjct: 344 ELVAKNLIAFKRGEIPPTLVNREVIKIRKPGFE 376
>pir||E72568 probable D-3-phosphoglycerate dehydrogenase APE1831 - Aeropyrum
pernix (strain K1) >gi|5105521|dbj|BAA80834.1|
(AP000062) 347aa long hypothetical D-3-phosphoglycerate
dehydrogenase [Aeropyrum pernix]
Length = 347
Score = 385 bits (979), Expect = e-106
Identities = 188/335 (56%), Positives = 248/335 (73%), Gaps = 1/335 (0%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M +PRVF+TRE+ +E+L K ++VEVW+ + P E LL K ++ DAL T+L++RID
Sbjct: 13 MKRPRVFVTREVFPEALELLSKYYDVEVWDKYQPPPYETLLSKAREADALYTLLTDRIDC 72
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
++ +APRLRIVA AVG+DNIDVE AT+ GIYVTNTPGVLT+ATA+ +AL+LA AR +
Sbjct: 73 DLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRV 132
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
V+ D F R GEW + WHP LG ++ GKT+GI+G GRIG +A+ + F MRI+Y+
Sbjct: 133 VEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYH 192
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
SR+RK E+EKEL AE++ L++LLRESD + + +PL ET H+I E LK+MK+TAIL+N
Sbjct: 193 SRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNT 252
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY-NEELFSLDNVVLTPHIGSATFGARE 299
RG ++DT AL+KAL+EGWIA A LDV+EEEP N L + NVVL PH SAT R
Sbjct: 253 GRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPHAASATRETRL 312
Query: 300 GMAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGF 334
MA + AENL+AF +G+VPP LVNREV+KVR+PGF
Sbjct: 313 RMAMMAAENLVAFAQGKVPPNLVNREVVKVRQPGF 347
>dbj|BAB07033.1| (AP001518) glycerate dehydrogenase [Bacillus halodurans]
Length = 324
Score = 305 bits (772), Expect = 6e-82
Identities = 159/326 (48%), Positives = 217/326 (65%), Gaps = 6/326 (1%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDER-EIPREILLEKVKDVDALVTMLSERIDREVF 63
R+ TR + IE L+ E ++ +W +E +PRE+ L+++++ D + T L++R D E F
Sbjct: 2 RLLFTRALDPEWIEPLKDEHDIRMWTEENIPMPRELFLKELEEADGVFTNLTDRFDVEAF 61
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
ERA RL++V+ AVGYDNID++EATKRG+ V +TPGVLT+ATADL FALL+AT R L +
Sbjct: 62 ERAKRLKVVSTMAVGYDNIDIKEATKRGVSVGHTPGVLTEATADLTFALLMATGRRLRES 121
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+ R+ +WK +W P G +YG T+GIIG GRIGQA+AKRA+GF+M +LY++R+
Sbjct: 122 IDYVRNDQWK----SWGPFMLTGQAIYGTTLGIIGMGRIGQAVAKRAKGFNMTLLYHNRS 177
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
R + EKEL A + LD LL SD+VVL P ET M+ + + MK TA IN +RG
Sbjct: 178 RNEQAEKELGATYCSLDHLLARSDYVVLLAPSTDETRKMMGPAQFQKMKSTAHFINTSRG 237
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMA 302
+D +AL +AL EGWIAGAGLDVYE+EP + L L NVV PHIGSA G R M
Sbjct: 238 TNVDEQALYRALTEGWIAGAGLDVYEKEPISADHPLVQLPNVVALPHIGSAEVGTRREMV 297
Query: 303 KLVAENLIAFKRGEVPPTLVNREVLK 328
+L ENL+ +G+ + N EVL+
Sbjct: 298 RLAIENLLLGIKGKSLTHIANPEVLE 323
>pir||H70032 glycerate dehydrogenase homolog yvcT - Bacillus subtilis
>gi|2635981|emb|CAB15473.1| (Z99121) similar to
glycerate dehydrogenase [Bacillus subtilis]
Length = 325
Score = 300 bits (759), Expect = 2e-80
Identities = 155/325 (47%), Positives = 218/325 (66%), Gaps = 9/325 (2%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSE--RI 58
M KP VFIT+ IPE + + EVW+++ +P ++L EK+K+ + L+T + I
Sbjct: 1 MLKPFVFITKPIPEEIEAFIGEHCRYEVWQEDT-LPSDVLFEKLKEAEGLLTSGTSGPSI 59
Query: 59 DREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATAR 118
+RE+ E AP+L++V+N +VGYDN D+E +RG+ T+TP L D ADLAF+L+L++AR
Sbjct: 60 NRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVVGTHTPYTLDDTVADLAFSLILSSAR 119
Query: 119 HLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRI 177
+ + D+F R+G+W G F G DV+ +T+GIIG GRIG+ A+RA+ GFDM +
Sbjct: 120 RVAELDRFVRAGKW---GTVEEEALF-GIDVHHQTLGIIGMGRIGEQAARRAKFGFDMEV 175
Query: 178 LYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
LY++R RK E E + ++ LD LL +SDF++L PL ETYHMI E K+MK +AI
Sbjct: 176 LYHNRHRKQETEDSIGVKYAELDTLLEQSDFILLITPLTDETYHMIGEREFKLMKNSAIF 235
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE-LFSLDNVVLTPHIGSATFG 296
+N++RGK +D KALI+AL+EGWI GAGLDVYE+EP + L LDNV L PHIGSAT
Sbjct: 236 VNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQDNPLLQLDNVTLLPHIGSATAK 295
Query: 297 AREGMAKLVAENLIAFKRGEVPPTL 321
R M K AEN++A +G+ P L
Sbjct: 296 VRFNMCKQAAENMLAAIQGQTPKNL 320
>emb|CAB08066.1| (Z94043) hypothetical protein [Bacillus subtilis]
Length = 288
Score = 276 bits (698), Expect = 3e-73
Identities = 141/287 (49%), Positives = 196/287 (68%), Gaps = 8/287 (2%)
Query: 39 ILLEKVKDVDALVTMLSE--RIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTN 96
+L EK+K+ + L+T + I+RE+ E AP+L++V+N +VGYDN D+E +RG+ T+
Sbjct: 1 MLFEKLKEAEGLLTSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVVGTH 60
Query: 97 TPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 156
TP L D ADLAF+L+L++AR + + D+F R+G+W G F G DV+ +T+GI
Sbjct: 61 TPYTLDDTVADLAFSLILSSARRVAELDRFVRAGKW---GTVEEEALF-GIDVHHQTLGI 116
Query: 157 IGFGRIGQAIAKRAR-GFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPL 215
IG GRIG+ A+RA+ GFDM +LY++R RK E E + ++ LD LL +SDF++L PL
Sbjct: 117 IGMGRIGEQAARRAKFGFDMEVLYHNRHRKQETEDSIGVKYAELDTLLEQSDFILLITPL 176
Query: 216 NKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYN 275
ETYHMI E K+MK +AI +N++RGK +D KALI+AL+EGWI GAGLDVYE+EP
Sbjct: 177 TDETYHMIGEREFKLMKNSAIFVNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQ 236
Query: 276 EE-LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTL 321
+ L LDNV L PHIGSAT R M K AEN++A +G+ P L
Sbjct: 237 DNPLLQLDNVTLLPHIGSATAKVRFNMCKQAAENMLAAIQGQTPKNL 283
>pir||B75120 phosphoglycerate dehydrogenase truncated homolog PAB0514 [imported]
- Pyrococcus abyssi (strain Orsay)
>gi|5458186|emb|CAB49675.1| (AJ248285) phosphoglycerate
dehydrogenase (serA), Nter fragment [Pyrococcus abyssi]
Length = 307
Score = 268 bits (678), Expect = 6e-71
Identities = 147/316 (46%), Positives = 201/316 (63%), Gaps = 10/316 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M + +V + + E I++L+ ++E+ E R L+E VKDV+A++ ++ R
Sbjct: 1 MIEVKVLVAAPLHEKAIQILKDAGLEVIYEEYPEEDR--LVELVKDVEAIIVRSKPKVTR 58
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
+V E AP+L+++A VG DNIDVE A +RGI V N P + + A+LA AL+ A AR +
Sbjct: 59 KVIESAPKLKVIARAGVGLDNIDVEAAKERGIEVVNAPAASSRSVAELAVALMFAVARKI 118
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
D+ R G W K K +G ++ GKT+GIIGFGRIG +AK AR M +L Y
Sbjct: 119 AFADRKMREGVWAK-------KQAMGIELEGKTLGIIGFGRIGYQVAKIARALGMNLLLY 171
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
E KE+ +F L+ LLRESD V + VPL + TYH+INEERLK+MK++AILIN
Sbjct: 172 DPYPNEERAKEVGGKFVDLETLLRESDIVTIHVPLLESTYHLINEERLKLMKKSAILINT 231
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE-LFSLDNVVLTPHIGSATFGARE 299
+RG V+DT AL+KAL+EGWIAGAGLDVYEEEP + L DNVVLTPHIG++T A+E
Sbjct: 232 SRGAVVDTNALVKALEEGWIAGAGLDVYEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQE 291
Query: 300 GMAKLVAENLIAFKRG 315
VAE ++ +G
Sbjct: 292 RAGVEVAEKVVKILKG 307
>gb|AAD21956.1| (AF101234) unknown [Staphylococcus aureus]
Length = 319
Score = 266 bits (674), Expect = 2e-70
Identities = 135/321 (42%), Positives = 197/321 (61%), Gaps = 6/321 (1%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDER-EIPREILLEKVKDVDALVTMLSERIDREVF 63
++ ++R+IP+ + L K +V +W+ +P++ + ++D DA LSE+ID E+
Sbjct: 3 KIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAEIL 62
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
++P L+++AN AVGYDNIDVE AT + VTNTP VLT+ TA+L F L+LA AR +V+
Sbjct: 63 AQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIVEA 122
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+K+ + W+ +W P G DV+ TIGI G G IG+A A+R +GF+ ILY++R+
Sbjct: 123 EKYVEADAWQ----SWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRS 178
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
R + E + NA + + LL ESDF++ PL KET+H N E + MK AI IN+ RG
Sbjct: 179 RHKDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRG 238
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMA 302
+++D ALI AL I GLDV EP + L DNV++TPHIGSA+ R+ M
Sbjct: 239 QIVDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMI 298
Query: 303 KLVAENLIAFKRGEVPPTLVN 323
+L N+ A +VP T VN
Sbjct: 299 QLCINNIEAVMTNQVPHTPVN 319
>pir||D75067 probable dehydrogenase PAB1008 - Pyrococcus abyssi (strain Orsay)
>gi|5458946|emb|CAB50433.1| (AJ248287) hypothetical
DEHYDROGENASE [Pyrococcus abyssi]
Length = 333
Score = 265 bits (671), Expect = 4e-70
Identities = 143/329 (43%), Positives = 206/329 (62%), Gaps = 6/329 (1%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KPR+ + ++ +E L+K +V + E E L E + ++D ++ RI +++
Sbjct: 2 KPRIGVLFKMKSKPLEELKKYTDVVLKPYPSE---EELKEIIPELDGIIIAPVTRITKDI 58
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
ERA RL++++ + GYD++DVEEATKRGIYVT G+L++A A+ A LL++ R +
Sbjct: 59 LERAERLKVISCQSAGYDHVDVEEATKRGIYVTKVSGLLSEAVAEFALGLLISLMRKIHY 118
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSR 182
D F R G+W+ W ++ +YGK +GI+G G IG+AIA+R + F I Y+SR
Sbjct: 119 ADSFIREGKWESHTFVWR-EFKEVETLYGKEVGIVGMGAIGKAIARRLKPFGCEIYYWSR 177
Query: 183 TRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVAR 242
RK ++E+E+NA++ LDELL E D V+LA+PL KETYH+INEER+K ++ L+N+ R
Sbjct: 178 HRKEDIEREVNAKYLDLDELLEEVDIVILALPLTKETYHIINEERVKKLE-GKYLVNIGR 236
Query: 243 GKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLD-NVVLTPHIGSATFGAREGM 301
G +ID KAL+KA+KEG + G DV+EEEP ELF VLTPH E M
Sbjct: 237 GALIDEKALVKAIKEGKLKGFATDVFEEEPVKEHELFRFKWETVLTPHYAGLGKDVLEDM 296
Query: 302 AKLVAENLIAFKRGEVPPTLVNREVLKVR 330
ENL+ RGE+P LVN+EVLKVR
Sbjct: 297 GFRAVENLLKVLRGEIPEDLVNKEVLKVR 325
>pir||E71011 probable phosphoglycerate dehydrogenase - Pyrococcus horikoshii
>gi|3257810|dbj|BAA30493.1| (AP000006) 307aa long
hypothetical phosphoglycerate dehydrogenase [Pyrococcus
horikoshii]
Length = 307
Score = 265 bits (671), Expect = 4e-70
Identities = 144/316 (45%), Positives = 199/316 (62%), Gaps = 10/316 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M + +V + + E I++L+ ++E+ + R L+E VKDV+A++ ++ R
Sbjct: 1 MKRMKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDR--LVELVKDVEAIIVRSKPKVTR 58
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
V E AP+L+++A VG DNIDVE A ++GI V N P + + A+LA L+ + AR +
Sbjct: 59 RVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKI 118
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
D+ R G W K+ +G ++ GKTIGIIGFGRIG +AK A M IL Y
Sbjct: 119 AFADRKMREGVWAKKEA-------MGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLY 171
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
E KE+N +F L+ LL+ESD V + VPL + TYH+INEERLK+MK+TAILIN
Sbjct: 172 DPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINT 231
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE-LFSLDNVVLTPHIGSATFGARE 299
+RG V+DT AL+KALKEGWIAGAGLDV+EEEP + L DNVVLTPHIG++T A+E
Sbjct: 232 SRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQE 291
Query: 300 GMAKLVAENLIAFKRG 315
VAE ++ +G
Sbjct: 292 RAGVEVAEKVVKILKG 307
>pir||C83158 probable 2-hydroxyacid dehydrogenase PA3896 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9950078|gb|AAG07283.1|AE004807_2 (AE004807) probable
2-hydroxyacid dehydrogenase [Pseudomonas aeruginosa]
Length = 325
Score = 261 bits (659), Expect = 1e-68
Identities = 145/325 (44%), Positives = 204/325 (62%), Gaps = 6/325 (1%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
K VF+ + +E L+ +F V V E ++ + D ++ + +
Sbjct: 2 KKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGMIGV-GRPLGARQ 60
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
E+A +L ++++ +VGYDN D++ +RGI +TNTP VLT+ TADL FALL++ AR + +
Sbjct: 61 LEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAE 120
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYS 181
D + ++G WK+ A P++ G DV+GK +GI+G GRIG AIA+R R GF M++LY+
Sbjct: 121 LDAWVKAGNWKRTVDA--PQF--GTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYHG 176
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
RKPE+E+EL A F DELL E+DFV + VPL +T +I L +MK +AIL+NVA
Sbjct: 177 NNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVA 236
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGM 301
RG+V+D AL+ AL+E I GAGLDVYE+EP LF+LDNVV PHIGSAT R M
Sbjct: 237 RGQVVDEAALVAALREKRILGAGLDVYEKEPLAESPLFALDNVVTLPHIGSATHETRRAM 296
Query: 302 AKLVAENLIAFKRGEVPPTLVNREV 326
A+ +N A RGE P LVN +V
Sbjct: 297 AERALQNFEAALRGERPLDLVNPQV 321
>pir||C71165 probable dehydrogenase - Pyrococcus horikoshii
>gi|3256925|dbj|BAA29608.1| (AP000002) 333aa long
hypothetical dehydrogenase [Pyrococcus horikoshii]
Length = 333
Score = 254 bits (641), Expect = 1e-66
Identities = 140/331 (42%), Positives = 208/331 (62%), Gaps = 21/331 (6%)
Query: 13 PEVGIEMLEKEFEVEVWEDEREIPREILL----EKVKDV----DALVTMLSERIDREVFE 64
P+VG+ + K +E + ++ EI+L E++K V D ++ + +I REV E
Sbjct: 3 PKVGVLLKMKREALEELKKYADV--EIILYPSGEELKGVIGRFDGIIVSPTTKITREVLE 60
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
A RL++++ ++ GYDNID+EEATKRGIYVT G+L++A A+ L++ R + D
Sbjct: 61 NAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYAD 120
Query: 125 KFTRSGEWKKRGVAWHPKWFLGY----DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
KF R GEW+ H K + G+ +YGK +GI+G G IG+AIA+R F +++ Y+
Sbjct: 121 KFIRRGEWES-----HAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYW 175
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
SR RK VEKEL A + +DELL +SD V+LA+PL ++TYH+INEER+K ++ L+N+
Sbjct: 176 SRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLE-GKYLVNI 234
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLD-NVVLTPHIGSATFGARE 299
RG ++D KA+ +A+K+G + G DV+E+EP ELF + VLTPH A+E
Sbjct: 235 GRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQE 294
Query: 300 GMAKLVAENLIAFKRGEVPPTLVNREVLKVR 330
+ ENL+ RGEVP LVN+EVL+VR
Sbjct: 295 DVGFRAVENLLKVLRGEVPEDLVNKEVLEVR 325
>gb|AAF51963.1| (AE003602) CG1236 gene product [Drosophila melanogaster]
Length = 325
Score = 250 bits (631), Expect = 2e-65
Identities = 140/319 (43%), Positives = 194/319 (59%), Gaps = 8/319 (2%)
Query: 2 SKPRVFITR-EIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
S+ +V++TR ++ + G+E+L K +V W + +PR L+ V DAL L++++D+
Sbjct: 3 SQHKVYVTRPDVDDSGLELLRKSCQVSTWHETNPVPRSELIRVVAGKDALYCALTDKVDK 62
Query: 61 EVFERA-PRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
EV + A P+L+ VA +VGYD+IDVEE KRGI V TP VLTDATA+L ALLLAT R
Sbjct: 63 EVLDAAGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRR 122
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGF-DMRIL 178
L + +K +G WK +W P W G + G +G++GFGRIGQ IA R F I
Sbjct: 123 LFEANKQVYNGGWK----SWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARIVPFKPTEIT 178
Query: 179 YYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILI 238
Y +R+ +P+ +NA DE+LRESD +V+ L ET + N + MK ILI
Sbjct: 179 YTTRSLRPKEAAAVNARHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILI 238
Query: 239 NVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGA 297
N ARG V+D KAL +ALK I AGLDV EP ++ L LDNVV+ PHIGSA
Sbjct: 239 NTARGGVVDQKALYEALKTKRILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIET 298
Query: 298 REGMAKLVAENLIAFKRGE 316
R+ M+++ A N++A G+
Sbjct: 299 RKEMSRITARNILAALAGD 317
>sp|O27051|SERA_METTH D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|7431368|pir||H69229
phosphoglycerate dehydrogenase - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622068|gb|AAB85466.1| (AE000870) phosphoglycerate
dehydrogenase [Methanobacterium thermoautotrophicum]
Length = 525
Score = 249 bits (630), Expect = 3e-65
Identities = 140/327 (42%), Positives = 192/327 (57%), Gaps = 10/327 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
MS+ +V I I E GI LE+ EV V I E LL+ +KD DA+V ++ R
Sbjct: 1 MSRMKVLIADSINEKGISELEEVAEVVV---NTTITPEELLDAIKDFDAIVVRSRTKVTR 57
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
EV E APRL+I+A VG DN+DV+ AT RGI V N P + A+ + L+LA AR +
Sbjct: 58 EVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKI 117
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
D+ + G+W+K F+G ++ GKT+GIIG GRIG + R + F M I+ Y
Sbjct: 118 AIADRSVKEGKWEKNR-------FMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVY 170
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
E +E+ L+ LLRESD V + VPL ET H+I+E+ K+MK TA ++N
Sbjct: 171 DPYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISEDEFKLMKDTAFIVNC 230
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
ARG +ID AL +ALK+G IAGA LDV+EEEP L L+NVVLTPHIG++T A+
Sbjct: 231 ARGGIIDEDALYRALKDGEIAGAALDVFEEEPPEGSPLLELENVVLTPHIGASTSEAQRD 290
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREVL 327
A +VA + +G P ++N V+
Sbjct: 291 AAIIVANEIKTVFQGGAPRNVLNMPVM 317
>sp|Q58424|SERA_METJA D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|2129189|pir||A64427
phosphoglycerate dehydrogenase (EC 1.1.1.95) -
Methanococcus jannaschii >gi|1591676|gb|AAB99020.1|
(U67544) phosphoglycerate dehydrogenase (serA)
[Methanococcus jannaschii]
Length = 524
Score = 246 bits (621), Expect = 3e-64
Identities = 134/330 (40%), Positives = 200/330 (60%), Gaps = 11/330 (3%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
++ +T + E I++LE+ EVEV + +E LLEK+KD D LV ++ R+V E
Sbjct: 3 KILVTDPLHEDAIKILEEVGEVEV---ATGLTKEELLEKIKDADVLVVRSGTKVTRDVIE 59
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
+A +L+++ VG DNIDVE AT++GI V N P + + A+L L+LA AR++ +
Sbjct: 60 KAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQAT 119
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR 184
+ GEW + K F G ++YGKT+G+IG GRIGQ + KRA+ F M I+ Y
Sbjct: 120 ASLKRGEWDR-------KRFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPYI 172
Query: 185 KPEVEKELNAEF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
EV + + E ++EL + +DF+ L VPL +T H+I E++ +MK+ AI++N ARG
Sbjct: 173 PKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARG 232
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAK 303
+ID KAL +ALKEG I A LDV+EEEP + L +LDNV+ TPH G++T A++
Sbjct: 233 GLIDEKALYEALKEGKIRAAALDVFEEEPPKDNPLLTLDNVIGTPHQGASTEEAQKAAGT 292
Query: 304 LVAENLIAFKRGEVPPTLVNREVLKVRKPG 333
+VAE + RGE+ +VN + K G
Sbjct: 293 IVAEQIKKVLRGELAENVVNMPNIPQEKLG 322
>pir||F83362 probable 2-hydroxyacid dehydrogenase PA2263 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9948291|gb|AAG05651.1|AE004652_4 (AE004652) probable
2-hydroxyacid dehydrogenase [Pseudomonas aeruginosa]
Length = 328
Score = 241 bits (609), Expect = 8e-63
Identities = 140/321 (43%), Positives = 196/321 (60%), Gaps = 7/321 (2%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V + + + +E L + EV + E+ L + + + L+ S R+D + +
Sbjct: 3 KVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPEAHGLLGA-SLRLDAGLLD 61
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
APRL +A+ +VG DN D++ +RGI ++NTP VLT+ TAD FAL+LATAR +V+
Sbjct: 62 LAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELA 121
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYSRT 183
+ R+GEWKK A G DV+GKT+GI+G GRIG+A+A+R GF MR+LY+S +
Sbjct: 122 GWVRAGEWKKSVGAAQ----FGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYHSHS 177
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
KP VE+ A ++PLD LL ESDFV L +PL T +I + M+ AI IN++RG
Sbjct: 178 PKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRG 237
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYY-NEELFSLDNVVLTPHIGSATFGAREGMA 302
+V+D ALI+AL + I AGLDV+E EP + L L NVV TPHIGSAT RE MA
Sbjct: 238 RVVDEAALIEALAQRRIRAAGLDVFEREPLSPDSPLLRLPNVVATPHIGSATEETREAMA 297
Query: 303 KLVAENLIAFKRGEVPPTLVN 323
+ +NL+A G P LVN
Sbjct: 298 RCAVDNLLAALAGARPLNLVN 318
>gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo sapiens]
>gi|11428924|ref|XP_005487.1| glyoxylate
reductase/hydroxypyruvate reductase [Homo sapiens]
>gi|5639830|gb|AAD45886.1|AF146018_1 (AF146018)
hydroxypyruvate reductase [Homo sapiens]
>gi|5669919|gb|AAD46517.1|AF146689_1 (AF146689)
hydroxypyruvate reductase [Homo sapiens]
>gi|6002730|gb|AAF00111.1|AF134895_1 (AF134895)
glyoxylate reductase [Homo sapiens]
Length = 328
Score = 233 bits (587), Expect = 3e-60
Identities = 134/321 (41%), Positives = 188/321 (57%), Gaps = 9/321 (2%)
Query: 5 RVFITREIPEVGIEMLEK--EFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
+VF+TR IP G L + + EVE W+ + IP + L V L+ +LS+ +D+ +
Sbjct: 8 KVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRI 67
Query: 63 FERA-PRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLV 121
+ A L++++ +VG D++ ++E KRGI V TP VLTD TA+LA +LLL T R L
Sbjct: 68 LDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLP 127
Query: 122 KGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYY 180
+ + ++G W +W P W GY + T+GIIG GRIGQAIA+R + F + R LY
Sbjct: 128 EAIEEVKNGGW----TSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYT 183
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
R +PE E AEF EL +SDF+V+A L T + N++ + MK TA+ IN+
Sbjct: 184 GRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINI 243
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGARE 299
+RG V++ L +AL G IA AGLDV EP N L +L N V+ PHIGSAT R
Sbjct: 244 SRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRN 303
Query: 300 GMAKLVAENLIAFKRGEVPPT 320
M+ L A NL+A RGE P+
Sbjct: 304 TMSLLAANNLLAGLRGEPMPS 324
>pir||S47774 hypothetical protein o365 - Escherichia coli
>gi|466691|gb|AAB18530.1| (U00039) No definition line
found [Escherichia coli]
Length = 365
Score = 231 bits (583), Expect = 9e-60
Identities = 135/326 (41%), Positives = 193/326 (58%), Gaps = 7/326 (2%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KP V + + +P+ ++ L++ F V + E + + L+ +E ++ +
Sbjct: 6 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGS-NENVNAAL 64
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
E+ P+LR + +VGYDN DV+ T R I + +TP VLT+ AD AL+L+TAR +V+
Sbjct: 65 LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE 124
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYS 181
+ ++GEW + P W+ G DV+ KT+GI+G GRIG A+A+RA GF+M ILY +
Sbjct: 125 VAERVKAGEWT---ASIGPDWY-GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNA 180
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
R E E+ NA + LD LL+ESDFV L +PL ET+H+ E+ MK +AI IN
Sbjct: 181 RRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAG 240
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREG 300
RG V+D ALI AL++G I AGLDV+E+EP + L S+ NVV PHIGSAT R G
Sbjct: 241 RGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYG 300
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREV 326
MA +NLI +G+V VN V
Sbjct: 301 MAACAVDNLIDALQGKVEKNCVNPHV 326
>pir||C65154 probable 2-hydroxyacid dehydrogenase in bisC-cspA intergenic region
- Escherichia coli (strain K-12)
>gi|2367243|gb|AAC76577.1| (AE000432) putative
dehydrogenase [Escherichia coli K12]
Length = 328
Score = 231 bits (583), Expect = 9e-60
Identities = 135/326 (41%), Positives = 193/326 (58%), Gaps = 7/326 (2%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KP V + + +P+ ++ L++ F V + E + + L+ +E ++ +
Sbjct: 6 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGS-NENVNAAL 64
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
E+ P+LR + +VGYDN DV+ T R I + +TP VLT+ AD AL+L+TAR +V+
Sbjct: 65 LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE 124
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYS 181
+ ++GEW + P W+ G DV+ KT+GI+G GRIG A+A+RA GF+M ILY +
Sbjct: 125 VAERVKAGEWT---ASIGPDWY-GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNA 180
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
R E E+ NA + LD LL+ESDFV L +PL ET+H+ E+ MK +AI IN
Sbjct: 181 RRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAG 240
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREG 300
RG V+D ALI AL++G I AGLDV+E+EP + L S+ NVV PHIGSAT R G
Sbjct: 241 RGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYG 300
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREV 326
MA +NLI +G+V VN V
Sbjct: 301 MAACAVDNLIDALQGKVEKNCVNPHV 326
>sp|P37666|YIAE_ECOLI PROBABLE 2-HYDROXYACID DEHYDROGENASE IN BISC-CSPA INTERGENIC REGION
Length = 324
Score = 231 bits (583), Expect = 9e-60
Identities = 135/326 (41%), Positives = 193/326 (58%), Gaps = 7/326 (2%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KP V + + +P+ ++ L++ F V + E + + L+ +E ++ +
Sbjct: 2 KPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGS-NENVNAAL 60
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
E+ P+LR + +VGYDN DV+ T R I + +TP VLT+ AD AL+L+TAR +V+
Sbjct: 61 LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE 120
Query: 123 GDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYS 181
+ ++GEW + P W+ G DV+ KT+GI+G GRIG A+A+RA GF+M ILY +
Sbjct: 121 VAERVKAGEWT---ASIGPDWY-GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNA 176
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
R E E+ NA + LD LL+ESDFV L +PL ET+H+ E+ MK +AI IN
Sbjct: 177 RRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAG 236
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREG 300
RG V+D ALI AL++G I AGLDV+E+EP + L S+ NVV PHIGSAT R G
Sbjct: 237 RGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYG 296
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREV 326
MA +NLI +G+V VN V
Sbjct: 297 MAACAVDNLIDALQGKVEKNCVNPHV 322
>pir||S48189 hydroxypyruvate reductase (EC 1.1.1.81) - Hyphomicrobium
methylovorum >gi|1304133|dbj|BAA06662.1| (D31857)
hydroxypyruvate reductase [Hyphomicrobium methylovorum]
Length = 322
Score = 227 bits (572), Expect = 2e-58
Identities = 126/322 (39%), Positives = 189/322 (58%), Gaps = 7/322 (2%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
MSK ++ IT +PE + + ++V D+ +I + ++E K VDAL+ L+E+ +
Sbjct: 1 MSKKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRK 60
Query: 61 EVFERAPR-LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
EV +R P ++ ++ Y++G+D+ID++ RGI V N P +T ATA++A LLL +AR
Sbjct: 61 EVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARR 120
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILY 179
+G+K R+ W W P +G + KT+GI GFG+IGQA+A+RARGFDM + Y
Sbjct: 121 AGEGEKMIRTRSWP----GWQPLQLVGQRLDNKTLGIYGFGKIGQALAQRARGFDMNVHY 176
Query: 180 YSRTR-KPEVEKELNAEFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
Y R KPEVE + NA + LD LL+ S F + P ET + N+E ++ + + AI+
Sbjct: 177 YDIYRAKPEVEAKYNATYHDSLDSLLKVSQFFSINAPSTPETRYFFNKETIEKLPQGAIV 236
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
+N ARG ++ +I ALK G +A AG DV+ EP NE + L N L PH+GSA A
Sbjct: 237 VNTARGDLVKDDDVIAALKSGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHLGSAAIEA 296
Query: 298 REGMAKLVAENLIAFKRGEVPP 319
R M +N+ AF G+ P
Sbjct: 297 RNQMGFEALDNIDAFFAGKDMP 318
>gb|AAF09059.1|AC011717_26 (AC011717) putative D-isomer specific 2-hydroxyacid dehydrogenase;
59386-58329 [Arabidopsis thaliana]
Length = 313
Score = 218 bits (550), Expect = 7e-56
Identities = 126/299 (42%), Positives = 180/299 (60%), Gaps = 14/299 (4%)
Query: 20 LEKEFEV-EVWEDEREIPREILLEKVKD-VDALVTMLSERIDREVFERAPRLRIVANYAV 77
LEK F + W + +LLE ++ + A+V S D ++ P L IV++++V
Sbjct: 20 LEKRFNLLRFWTSPE---KSVLLETHRNSIRAVVGNASAGADAQLISDLPNLEIVSSFSV 76
Query: 78 GYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGV 137
G D ID+ + ++GI VTNTP VLT+ ADLA L+LA R L + D++ RSG+WK+
Sbjct: 77 GLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLCECDRYVRSGKWKQGEF 136
Query: 138 AWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFK 197
K+ GK++GIIG GRIG AIAKRA F I YYSRT KP+V + +
Sbjct: 137 QLTTKFS------GKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTIKPDVAYKY---YP 187
Query: 198 PLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKE 257
+ +L + SD +V+A PL ++T H+++ + + + +LIN+ RG +D + LIKAL E
Sbjct: 188 TVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQELIKALTE 247
Query: 258 GWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGE 316
G + GA LDV+E+EP+ EELF L+NVVL PH+GS T R MA LV NL A G+
Sbjct: 248 GRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNLEAHFSGK 306
>gb|AAF53930.1| (AE003668) CG9332 gene product [Drosophila melanogaster]
Length = 598
Score = 217 bits (546), Expect = 2e-55
Identities = 125/310 (40%), Positives = 186/310 (59%), Gaps = 8/310 (2%)
Query: 11 EIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERA-PRL 69
++P GIE+L+++ E+ +E R +LEK++ A++ + ++ E+ + A P+L
Sbjct: 286 DVPPEGIEILKEQCEILQVINEPPKNRPEILEKIRGAHAVIWGGRDILNAEILDAAGPQL 345
Query: 70 RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRS 129
+ V+ + G +N+DV E KRGI + +TP +LT A ADL LL+A AR +G + S
Sbjct: 346 KAVSTMSSGINNVDVPELKKRGIPLGSTPAMLTVAVADLTVGLLIAAARRFQEGRRKIDS 405
Query: 130 GEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYYSRTR-KPE 187
+W K H W LG D+ T+G GFG IGQA+AKR GFD+ R+LY +R R +
Sbjct: 406 DKWDKD----HLNWMLGQDIRDSTVGFYGFGGIGQAVAKRLMGFDIKRMLYTTRNRVSQD 461
Query: 188 VEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
+E+ NA+ + LL ESDF+++A PL KET + N MK TA+L+NV RGK+++
Sbjct: 462 IEERFNAKKVDFETLLAESDFLIIASPLTKETLGLFNATVFNKMKETAVLVNVGRGKIVN 521
Query: 248 TKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMAKLVA 306
L +ALK I AGLDV + EP N++L +LDNVV+TPH+G AT R A L +
Sbjct: 522 QDDLYEALKSNRIFAAGLDVMDPEPLPSNDKLLTLDNVVVTPHVGYATRRTRVDAANLAS 581
Query: 307 ENLIAFKRGE 316
N++ GE
Sbjct: 582 RNVLKGLAGE 591
Score = 141 bits (352), Expect = 1e-32
Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 6/184 (3%)
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
E+ ++ P LR V+ + G D +D+ E KRGI + +TPGV+ +A ADLA L++A RH
Sbjct: 67 EILQKVPGLRCVSTMSSGIDFVDIPEFQKRGIPLGHTPGVVKNAVADLAIGLMIAAGRHF 126
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILY 179
G +WK + W +G ++ IG GFG I QAIAKR + +D+ +I+Y
Sbjct: 127 HAGRTEIERSQWKIEQI----NWMMGQEIRDSVIGFFGFGGISQAIAKRLQCWDVAKIIY 182
Query: 180 YSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILIN 239
++RTRK E + + AE ++LL+ESDF+V+A PL ET N + +MKR+++ +N
Sbjct: 183 HTRTRK-ENDGDFKAEHVSFEQLLQESDFLVVAAPLTNETREKFNGKAFNLMKRSSVFVN 241
Query: 240 VARG 243
VARG
Sbjct: 242 VARG 245
>pir||B72257 D-3-phosphoglycerate dehydrogenase - Thermotoga maritima (strain
MSB8) >gi|4981965|gb|AAD36472.1|AE001793_2 (AE001793)
D-3-phosphoglycerate dehydrogenase [Thermotoga maritima]
Length = 306
Score = 215 bits (543), Expect = 4e-55
Identities = 120/312 (38%), Positives = 187/312 (59%), Gaps = 15/312 (4%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M++ RV + + + ++L + E+EV + E ++ L++ + +VD LV + ++
Sbjct: 1 MARYRVHVNDPLDKEATQLLMNKEELEVTSEHLE--KDELMKIIPEVDVLVVRSATKVTA 58
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
++ E L+I+A +G DNIDV++A ++GI V NTPG + A+LA L+LA ARH+
Sbjct: 59 DIIEAGKNLKIIARAGIGLDNIDVQKAKEKGIKVLNTPGASAPSVAELAMGLMLACARHI 118
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
+ + G+W+K+ + G ++ GKT+G+IGFG IGQ +AKRA F M+I+ Y
Sbjct: 119 ARATVSLKEGKWEKKALK-------GKELLGKTLGLIGFGNIGQEVAKRALAFGMKIIAY 171
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
KPE +L E+ LD L +ESDF+ L VPL + T H+IN E + MK I++N
Sbjct: 172 D-PAKPET--DLPVEYVDLDTLFKESDFISLHVPLTESTRHIINRESIAKMKDGVIIVNT 228
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNE---ELFSLDNVVLTPHIGSATFGA 297
ARG ID +AL + + G + AGLDV+E EP +E +L SLDNVV TPHIG++T A
Sbjct: 229 ARGGTIDEEALYEEVVSGKVYAAGLDVFEVEPPTDEIRRKLLSLDNVVATPHIGASTAEA 288
Query: 298 REGMAKLVAENL 309
+ + + E +
Sbjct: 289 QRRVGIELVEKI 300
>pir||T35831 probable D-3-phosphoglycerate dehydrogenase - Streptomyces
coelicolor >gi|4467266|emb|CAB37591.1| (AL035569)
probable D-3-phosphoglycerate dehydrogenase
[Streptomyces coelicolor A3(2)]
Length = 529
Score = 215 bits (543), Expect = 4e-55
Identities = 118/322 (36%), Positives = 183/322 (56%), Gaps = 10/322 (3%)
Query: 2 SKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDRE 61
SKP V I E+ ++ L +FE+ R LL + DVDA++ + ++D E
Sbjct: 3 SKPVVLIAEELSPATVDALGPDFEIRHCNGA---DRAELLPAIADVDAILVRSATKVDAE 59
Query: 62 VFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLV 121
A +L++VA VG DN+DV ATK G+ V N P A+LA L++ATAR++
Sbjct: 60 AVAAAKKLKVVARAGVGLDNVDVSAATKAGVMVVNAPTSNIVTAAELACGLIVATARNIP 119
Query: 122 KGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYS 181
+ + ++GEWK+ + G ++ KT+G++G GRIG +A+R F M+++ Y
Sbjct: 120 QANAALKNGEWKRSK-------YTGVELAEKTLGVVGLGRIGALVAQRMSAFGMKVVAYD 172
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
+P ++ + LDELL SDF+ + +P ET +I +E L+ +K + ++N A
Sbjct: 173 PYVQPARAAQMGVKVLSLDELLEVSDFITVHLPKTPETLGLIGDEALRKVKPSVRIVNAA 232
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGM 301
RG ++D +AL ALKEG +AGAGLDVY +EP + LF D VV TPH+G++T A+E
Sbjct: 233 RGGIVDEEALYSALKEGRVAGAGLDVYAKEPCTDSPLFEFDQVVATPHLGASTDEAQEKA 292
Query: 302 AKLVAENLIAFKRGEVPPTLVN 323
VA+++ GE+ P VN
Sbjct: 293 GIAVAKSVRLALAGELVPDAVN 314
>sp|P36234|DHGY_HYPME GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYDROXYPYRUVATE REDUCTASE)
(HPR) (GDH) (HYDROXYPYRUVATE DEHYDROGENASE) (GLYOXYLATE
REDUCTASE)
Length = 322
Score = 211 bits (532), Expect = 8e-54
Identities = 120/305 (39%), Positives = 176/305 (57%), Gaps = 7/305 (2%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
MSK ++ IT +PE + + ++V D+ +I + ++E K VDAL+ L+E+ +
Sbjct: 1 MSKKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRK 60
Query: 61 EVFERAPR-LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
EV +R P ++ ++ Y++G+D+ID++ RGI V N P +T ATA++A LLL +AR
Sbjct: 61 EVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARR 120
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILY 179
+G+K R+ W W P +G + KT+GI GFG IGQA+AKRA+GFDM I Y
Sbjct: 121 AGEGEKMIRTRSWP----GWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDY 176
Query: 180 YSRTRKPEV-EKELNAEFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
+ R E A F LD LL S F L P ET + N+ +K + + AI+
Sbjct: 177 FDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIV 236
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
+N ARG ++D + ++ AL+ G +A AG DV+ EP NE + L N L PHIGSA A
Sbjct: 237 VNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQA 296
Query: 298 REGMA 302
RE MA
Sbjct: 297 REDMA 301
>pir||A70464 D-3-phosphoglycerate dehydrogenase - Aquifex aeolicus
>gi|2984165|gb|AAC07698.1| (AE000762)
D-3-phosphoglycerate dehydrogenase [Aquifex aeolicus]
Length = 533
Score = 210 bits (528), Expect = 2e-53
Identities = 122/326 (37%), Positives = 190/326 (57%), Gaps = 15/326 (4%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V IT I GIE+L+K+ EVEV+ +E +I E LLE +KD DA++T + +E+ E
Sbjct: 3 KVLITDPIAPEGIELLQKDPEVEVY-NEPDISYEELLEIIKDFDAIITRSRTPVTKELLE 61
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
RA +L++V VG DN+D+EEATKRGI V NTPG T +L +L R+ K
Sbjct: 62 RAEKLKVVGRAGVGVDNVDIEEATKRGILVVNTPGANTIGATELTMMHMLTIMRNGHKAH 121
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR 184
+ + +W + K F+G ++YG+ +GIIG G IG +A RA+ F M+++ Y
Sbjct: 122 ESMLNYKWDR-------KKFMGEELYGRILGIIGLGNIGSQVAIRAKAFGMKVMAYDPYI 174
Query: 185 KPEVEKELNAEF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
E ++L + L ++LRE D + + PL ET +MI+E+ ++MK ++N ARG
Sbjct: 175 PREKAEKLGVKLVDNLHDMLREIDVLTIHAPLTHETKNMIDEKEFEIMKDGVYIVNCARG 234
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLD------NVVLTPHIGSATFGA 297
+I+ KALIK ++ G I G LDVY +EP E + L N+ L+PHIG+ T+ +
Sbjct: 235 GIINEKALIKYMESGKIKGVALDVYSKEPPPPEFIDELKRLADKVNISLSPHIGANTYES 294
Query: 298 REGMAKLVAENLIAFKRGEVPPTLVN 323
+ +A +VA+ ++ +G+ VN
Sbjct: 295 QRNVAVIVAQQVLKALKGQTVEYAVN 320
>gi|11498419 phosphoglycerate dehydrogenase (serA) [Archaeoglobus fulgidus]
>gi|3122861|sp|O29445|SERA_ARCFU D-3-PHOSPHOGLYCERATE
DEHYDROGENASE (PGDH) >gi|7431372|pir||E69351
phosphoglycerate dehydrogenase (serA) homolog -
Archaeoglobus fulgidus >gi|2649798|gb|AAB90429.1|
(AE001048) phosphoglycerate dehydrogenase (serA)
[Archaeoglobus fulgidus]
Length = 527
Score = 209 bits (527), Expect = 3e-53
Identities = 116/313 (37%), Positives = 181/313 (57%), Gaps = 12/313 (3%)
Query: 5 RVFITREIPEVGIEMLEKE-FEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
+V + I E I+ + K EVEV + + RE L+ +V +A+V ++D EV
Sbjct: 2 KVLVAEPISEEAIDYMRKNGLEVEV---KTGMSREELIREVPKYEAIVVRSQTKVDAEVI 58
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
+ A L+I+ VG DNID+ AT+RGI V N PG T +TA+ A AL+LA AR + +
Sbjct: 59 QAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQA 118
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
D+ + G+W++ K F+G ++ GKT G+IG GR+G +AKR + +M +L Y
Sbjct: 119 DRSVKEGKWER-------KKFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF 171
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
E +++ + D LL SD + + VP KET +I + + + MK I++N ARG
Sbjct: 172 VSKERAEQIGVKLVDFDTLLASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARG 231
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEE-PYYNEELFSLDNVVLTPHIGSATFGAREGMA 302
++D AL +A+K G +A A LDVYE+E P + L LDNVV TPHI ++T A+ +
Sbjct: 232 GIVDEAALYEAIKAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAASTREAQLNVG 291
Query: 303 KLVAENLIAFKRG 315
++AE+++ +G
Sbjct: 292 MIIAEDIVNMAKG 304
>pdb|1GDH|A Chain A, D-Glycerate Dehydrogenase (Apo Form) (E.C.1.1.1.29)
>gi|494036|pdb|1GDH|B Chain B, D-Glycerate Dehydrogenase
(Apo Form) (E.C.1.1.1.29)
Length = 320
Score = 208 bits (523), Expect = 1e-52
Identities = 118/303 (38%), Positives = 174/303 (56%), Gaps = 7/303 (2%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
K ++ IT +PE + + ++V D+ +I + ++E K VDAL+ L+E+ +EV
Sbjct: 1 KKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEV 60
Query: 63 FERAPR-LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLV 121
+R P ++ ++ Y++G+D+ID++ RGI V N P +T ATA++A LLL +AR
Sbjct: 61 IDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAG 120
Query: 122 KGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYS 181
+G+K R+ W W P +G + KT+GI GFG IGQA+AKRA+GFDM I Y+
Sbjct: 121 EGEKMIRTRSWP----GWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFD 176
Query: 182 RTRKPEV-EKELNAEFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILIN 239
R E A F LD LL S F L P ET + N+ +K + + AI++N
Sbjct: 177 THRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVN 236
Query: 240 VARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGARE 299
ARG ++D + ++ AL+ G +A AG DV+ EP NE + L N L PHIGSA ARE
Sbjct: 237 TARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQARE 296
Query: 300 GMA 302
MA
Sbjct: 297 DMA 299
>pir||S68164 glycerate dehydrogenase (EC 1.1.1.29) splice form HPR1, microbody -
cucurbit >gi|1304042|dbj|BAA08410.1| (D49432)
hydroxypyruvate reductase [Cucurbita sp.]
Length = 386
Score = 207 bits (521), Expect = 2e-52
Identities = 124/313 (39%), Positives = 185/313 (58%), Gaps = 25/313 (7%)
Query: 19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVAN 74
++E++ VE+ +++ I E ++ + D D ++ L+E +F R + +N
Sbjct: 33 LIEQDCRVEICTEKKTILSVEDIVALIGDKCDGVIGQLTEDWGEVLFSALSRAGCKAFSN 92
Query: 75 YAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKK 134
AVGY+N+DV A K GI V NTPGVLT+ TA+LA +L LA AR +V+ D+F R+G +
Sbjct: 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGHYD- 151
Query: 135 RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKR-ARGFDMRILYYSRTRKPEVEKELN 193
W P F+G + G+T+G+IG GRIG A A+ GF M ++Y+ + +EK +
Sbjct: 152 ---GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVT 208
Query: 194 A--EF--------------KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
A EF +DE+LRE+D + L L+K T+H++N+E LK MK+ AIL
Sbjct: 209 AYGEFLKANGEVPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAIL 268
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
IN +RG VID AL++ LKE + GLDV+E+EPY L + N ++ PHI SA+
Sbjct: 269 INCSRGPVIDEAALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWT 328
Query: 298 REGMAKLVAENLI 310
REGMA L A N++
Sbjct: 329 REGMATLAALNVL 341
>pir||S68165 glycerate dehydrogenase (EC 1.1.1.29) splice form HPR2 - cucurbit
>gi|1304044|dbj|BAA08411.1| (D49433) hydroxypyruvate
reductase [Cucurbita sp.]
Length = 381
Score = 207 bits (521), Expect = 2e-52
Identities = 124/313 (39%), Positives = 185/313 (58%), Gaps = 25/313 (7%)
Query: 19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVAN 74
++E++ VE+ +++ I E ++ + D D ++ L+E +F R + +N
Sbjct: 33 LIEQDCRVEICTEKKTILSVEDIVALIGDKCDGVIGQLTEDWGEVLFSALSRAGCKAFSN 92
Query: 75 YAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKK 134
AVGY+N+DV A K GI V NTPGVLT+ TA+LA +L LA AR +V+ D+F R+G +
Sbjct: 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGHYD- 151
Query: 135 RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKR-ARGFDMRILYYSRTRKPEVEKELN 193
W P F+G + G+T+G+IG GRIG A A+ GF M ++Y+ + +EK +
Sbjct: 152 ---GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVT 208
Query: 194 A--EF--------------KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
A EF +DE+LRE+D + L L+K T+H++N+E LK MK+ AIL
Sbjct: 209 AYGEFLKANGEVPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAIL 268
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
IN +RG VID AL++ LKE + GLDV+E+EPY L + N ++ PHI SA+
Sbjct: 269 INCSRGPVIDEAALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWT 328
Query: 298 REGMAKLVAENLI 310
REGMA L A N++
Sbjct: 329 REGMATLAALNVL 341
>pir||C72483 probable formate dehydrogenase APE2507 - Aeropyrum pernix (strain
K1) >gi|5106212|dbj|BAA81523.1| (AP000064) 326aa long
hypothetical formate dehydrogenase [Aeropyrum pernix]
Length = 326
Score = 206 bits (519), Expect = 3e-52
Identities = 116/301 (38%), Positives = 172/301 (56%), Gaps = 20/301 (6%)
Query: 35 IPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGI 92
+PRE +LE+++D D ++ RID E+ R+R+V + GYD+IDVE + G+
Sbjct: 31 LPRERVLEELRDADVVIGDYTFQMRIDAEMCAAMERVRLVQQPSTGYDHIDVEACARHGV 90
Query: 93 YVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFL----GYD 148
V N G + A+ LA + L+ + T +G W P+W L +D
Sbjct: 91 PVANAGGANAVSVAEYTIMAALALLKRLLYAHRETVAGGW--------PQWRLMEMGTFD 142
Query: 149 VYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDF 208
+ GKT GIIG GRIG+ +AKR R F++R +Y+ + R + E+EL E++ L LLRESD
Sbjct: 143 LQGKTWGIIGLGRIGREVAKRLRPFEVRTVYFDKVRMEDAERELGVEYRSLSRLLRESDV 202
Query: 209 VVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVY 268
V + VPL ET MI E L+MMK TA+LIN +RG+++D +AL +A++E WIAGA +DVY
Sbjct: 203 VSIHVPLTSETRGMIGEGELRMMKPTAVLINPSRGEIVDEEALARAVRERWIAGAAVDVY 262
Query: 269 EEEPYYNEELF------SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLV 322
EP + + N++LTPHI A AR + + EN++ +G P +V
Sbjct: 263 SREPPPPDHPLIRAAGEADVNLILTPHIAGANTDARSRIIQFSIENIVRVLKGGKPEAVV 322
Query: 323 N 323
N
Sbjct: 323 N 323
>sp|O04130|SERA_ARATH D-3-PHOSPHOGLYCERATE DEHYDROGENASE PRECURSOR (PGDH)
>gi|2189964|dbj|BAA20405.1| (AB003280) Phosphoglycerate
dehydrogenase [Arabidopsis thaliana]
>gi|2804258|dbj|BAA24440.1| (AB010407) phosphoglycerate
dehydrogenase [Arabidopsis thaliana]
>gi|9802747|gb|AAF99816.1|AC034257_8 (AC034257)
D-3-phosphoglycerate dehydrogenase [Arabidopsis
thaliana]
Length = 624
Score = 206 bits (519), Expect = 3e-52
Identities = 115/325 (35%), Positives = 187/325 (57%), Gaps = 12/325 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
+ KPR+ +T ++ E G+ +L + +V+ D + E L +KV + DAL+ ++ R
Sbjct: 80 LPKPRILVTEKLGEAGVNLLREFGDVDCSYD---LSPEDLKKKVAESDALIVRSGTKVTR 136
Query: 61 EVFERAP-RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
EVFE A RL++V VG DN+D++ AT+ G V N P T A A+ ALL + AR+
Sbjct: 137 EVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARN 196
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILY 179
+ + D ++G+W++ ++G + GKT+ ++GFG++G +A+RA+G M ++
Sbjct: 197 VAQADASIKAGKWERSK-------YVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVIS 249
Query: 180 YSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILIN 239
+ + + L + D+ + +DFV L +PL T + N+E MK+ LIN
Sbjct: 250 HDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSKMKKGVRLIN 309
Query: 240 VARGKVIDTKALIKALKEGWIAGAGLDVY-EEEPYYNEELFSLDNVVLTPHIGSATFGAR 298
VARG VID AL++AL G +A A LDV+ EE P + L +NV +TPH+G++T A+
Sbjct: 310 VARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHLGASTKEAQ 369
Query: 299 EGMAKLVAENLIAFKRGEVPPTLVN 323
EG+A +AE + +GE+ T VN
Sbjct: 370 EGVAIEIAEAVAGALKGELSATAVN 394
>sp|P13443|DHGY_CUCSA GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYDROXYPYRUVATE REDUCTASE)
(HPR) (GDH) >gi|65955|pir||DEKVG glycerate dehydrogenase
(EC 1.1.1.29) - cucumber >gi|18264|emb|CAA41434.1|
(X58542) NADH-dependent hydroxypyruvate reductase
[Cucumis sativus] >gi|18275|emb|CAA32764.1| (X14609)
NAPH-dependent hydroxypyruvate reductase (AA 1 - 382)
[Cucumis sativus]
Length = 382
Score = 205 bits (517), Expect = 5e-52
Identities = 123/318 (38%), Positives = 186/318 (57%), Gaps = 25/318 (7%)
Query: 19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVAN 74
++E++ VE+ +++ I E +L + D D ++ L+E +F R + +N
Sbjct: 33 LIEQDCRVEICTEKKTILSVEDILALIGDKCDGVIGQLTEDWGEVLFSALSRAGGKAFSN 92
Query: 75 YAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKK 134
AVGY+N+DV A K G+ V NTPGVLT+ TA+LA +L LA AR +V+ D+F R+G +
Sbjct: 93 MAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYD- 151
Query: 135 RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKR-ARGFDMRILYYSRTRKPEVEKELN 193
W P F+G + G+T+G+IG GRIG A A+ GF M ++Y+ + +EK +
Sbjct: 152 ---GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVT 208
Query: 194 A--EF--------------KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
A EF +DE+LRE+D + L L+K T+H++N+E LK MK+ AIL
Sbjct: 209 AYGEFLKANGEAPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAIL 268
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
IN +RG VID AL+ L++ + GLDV+E+EPY L + N ++ PHI SA+
Sbjct: 269 INCSRGPVIDEAALVDHLRDNPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWT 328
Query: 298 REGMAKLVAENLIAFKRG 315
REGMA L A N++ +G
Sbjct: 329 REGMATLAALNVLGKIKG 346
>gb|AAF16561.1|AC012563_14 (AC012563) hydroxypyruvate reductase (HPR); 50972-48670
[Arabidopsis thaliana]
Length = 386
Score = 205 bits (516), Expect = 6e-52
Identities = 117/287 (40%), Positives = 169/287 (58%), Gaps = 23/287 (8%)
Query: 48 DALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDAT 105
D ++ L+E +F + + +N AVGY+N+DVE A K GI V NTPGVLT+ T
Sbjct: 64 DGVIGQLTEDWGETLFSALSKAGGKAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETT 123
Query: 106 ADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQA 165
A+LA +L LA AR +V+ D+F R G ++ W P F+G + G+T+G+IG GRIG A
Sbjct: 124 AELAASLSLAAARRIVEADEFMRGGLYE----GWLPHLFVGNLLKGQTVGVIGAGRIGSA 179
Query: 166 IAKR-ARGFDMRILYYSRTRKPEVEKELNA----------------EFKPLDELLRESDF 208
A+ GF M ++Y+ + +EK + A ++E+LRE+D
Sbjct: 180 YARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADL 239
Query: 209 VVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVY 268
+ L L+K TYH++N+ERL MMK+ AIL+N +RG VID AL++ LKE + GLDV+
Sbjct: 240 ISLHPVLDKTTYHLVNKERLAMMKKEAILVNCSRGPVIDEAALVEHLKENPMFRVGLDVF 299
Query: 269 EEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315
EEEP+ L N ++ PHI SA+ REGMA L A N++ +G
Sbjct: 300 EEEPFMKPGLADTKNAIVVPHIASASKWTREGMATLAALNVLGRVKG 346
>dbj|BAA19751.1| (D85339) hydroxypyruvate reductase [Arabidopsis thaliana]
Length = 386
Score = 203 bits (512), Expect = 2e-51
Identities = 116/287 (40%), Positives = 169/287 (58%), Gaps = 23/287 (8%)
Query: 48 DALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDAT 105
D ++ L+E +F + + +N AVGY+N+DVE A K GI V NTPGVLT+ T
Sbjct: 64 DGVIGQLTEDWGETLFSALSKAGGKAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETT 123
Query: 106 ADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQA 165
A+LA +L LA AR +V+ D+F R G ++ W P F+G + G+T+G+IG GRIG A
Sbjct: 124 AELAASLSLAAARRIVEADEFMRGGLYE----GWLPHLFVGNLLKGQTVGVIGAGRIGSA 179
Query: 166 IAKR-ARGFDMRILYYSRTRKPEVEKELNA----------------EFKPLDELLRESDF 208
A+ GF M ++Y+ + +EK + A ++E+LRE+D
Sbjct: 180 YARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADL 239
Query: 209 VVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVY 268
+ L L+K TYH++N+ERL MMK+ AIL+N +RG VI AL++ LKE + GLDV+
Sbjct: 240 ISLHPVLDKTTYHLVNKERLAMMKKEAILVNCSRGPVIHEAALVEHLKENPMFRVGLDVF 299
Query: 269 EEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315
EEEP+ L + N ++ PHI SA+ REGMA L A N++ +G
Sbjct: 300 EEEPFMKPGLADMKNAIVVPHIASASKWTREGMATLAALNVLGRVKG 346
>sp|O33116|SERA_MYCLE D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|11251649|pir||T45418
phosphoglycerate dehydrogenase [imported] -
Mycobacterium leprae >gi|2414551|emb|CAB16440.1|
(Z99263) phosphoglycerate dehydrogenase [Mycobacterium
leprae]
Length = 528
Score = 201 bits (507), Expect = 7e-51
Identities = 117/323 (36%), Positives = 174/323 (53%), Gaps = 10/323 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M P V I ++ + + L + EV W D + R LL V + DAL+ + +D
Sbjct: 1 MDLPVVLIADKLAQSTVAALGDQVEVR-WVDGPD--RTKLLAAVPEADALLVRSATTVDA 57
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
EV AP+L+IVA VG DN+DV+ AT RG+ V N P + A+ A ALLLA +R +
Sbjct: 58 EVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQI 117
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
+ D R+ WK+ F G +++GKT+G++G GRIGQ +A R F ++ Y
Sbjct: 118 AEADASLRAHIWKRSS-------FSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAY 170
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
P +L E D+LL +DF+ + +P ET +I++E L K I++N
Sbjct: 171 DPYVAPARAAQLGIELMSFDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNA 230
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
ARG ++D AL A++ G + AGLDV+ EP + LF L VV+TPH+G++T A++
Sbjct: 231 ARGGLVDEVALADAVRSGHVRAAGLDVFATEPCTDSPLFELSQVVVTPHLGASTAEAQDR 290
Query: 301 MAKLVAENLIAFKRGEVPPTLVN 323
VAE++ GE P VN
Sbjct: 291 AGTDVAESVRLALAGEFVPDAVN 313
>sp|O53243|SERA_MYCTU D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|7431374|pir||G70854
probable serA protein - Mycobacterium tuberculosis
(strain H37RV) >gi|2791593|emb|CAA16081.1| (AL021287)
serA [Mycobacterium tuberculosis]
Length = 528
Score = 201 bits (506), Expect = 9e-51
Identities = 119/323 (36%), Positives = 174/323 (53%), Gaps = 10/323 (3%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
MS P V I ++ + L + EV W D + R+ LL V + DAL+ + +D
Sbjct: 1 MSLPVVLIADKLAPSTVAALGDQVEVR-WVDGPD--RDKLLAAVPEADALLVRSATTVDA 57
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
EV AP+L+IVA VG DN+DV+ AT RG+ V N P + A+ A ALLLA +R +
Sbjct: 58 EVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQI 117
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
D R WK+ F G +++GKT+G++G GRIGQ +A+R F ++ Y
Sbjct: 118 PAADASLREHTWKRSS-------FSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAY 170
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
P +L E LD+LL +DF+ + +P ET +I++E L K I++N
Sbjct: 171 DPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNA 230
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
ARG ++D AL A+ G + AGLDV+ EP + LF L VV+TPH+G++T A++
Sbjct: 231 ARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDR 290
Query: 301 MAKLVAENLIAFKRGEVPPTLVN 323
VAE++ GE P VN
Sbjct: 291 AGTDVAESVRLALAGEFVPDAVN 313
>pir||T05416 probable phosphoglycerate dehydrogenase (EC 1.1.1.95) - Arabidopsis
thaliana >gi|2911042|emb|CAA17552.1| (AL021961)
Phosphoglycerate dehydrogenase-like protein [Arabidopsis
thaliana] >gi|7270370|emb|CAB80137.1| (AL161585)
Phosphoglycerate dehydrogenase-like protein [Arabidopsis
thaliana]
Length = 603
Score = 200 bits (504), Expect = 2e-50
Identities = 116/338 (34%), Positives = 188/338 (55%), Gaps = 17/338 (5%)
Query: 2 SKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDRE 61
SKP + + ++ + GI++LE V+ P E+ + K+ DAL+ ++ RE
Sbjct: 60 SKPTILVAEKLGDAGIKLLEDVANVDC--SYNMTPEELNI-KISLCDALIVRSGTKVGRE 116
Query: 62 VFERAP-RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
VFE + RL++V VG DN+D+ AT+ G V N P T A A+ AL+ A AR++
Sbjct: 117 VFESSHGRLKVVGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNV 176
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
+ D ++GEWK+ ++G + GKT+ ++GFG++G +A+RA+G MR++ +
Sbjct: 177 AQADASVKAGEWKRNK-------YVGVSLVGKTLAVLGFGKVGTEVARRAKGLGMRVIAH 229
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
+ + + DE L +DF+ L +PL T ++N+E MK+ ++NV
Sbjct: 230 DPYAPADRAHAIGVDLVSFDEALATADFISLHMPLTPTTSKILNDETFAKMKKGVRIVNV 289
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVY-EEEPYYNEELFSLDNVVLTPHIGSATFGARE 299
ARG VID AL++AL G +A A LDV+ +E P + +L + V +TPH+G++T A+E
Sbjct: 290 ARGGVIDEDALVRALDAGIVAQAALDVFTKEPPAKDSKLVQHERVTVTPHLGASTMEAQE 349
Query: 300 GMAKLVAENLIAFKRGEVPPTLVN-----REVLKVRKP 332
G+A +AE ++ GE+ T VN EVL KP
Sbjct: 350 GVAIEIAEAVVGALNGELAATAVNAPMVSAEVLTELKP 387
>dbj|BAA99698.1| (AB025624) phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 588
Score = 200 bits (503), Expect = 2e-50
Identities = 116/337 (34%), Positives = 189/337 (55%), Gaps = 17/337 (5%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
KP + +T ++ + GI++L+K V+ D + E L K+ DAL+ ++ R+V
Sbjct: 46 KPTILVTEKLGQAGIDLLKKYANVDCSYD---LSLEELCTKISLCDALIVRSGTKVGRDV 102
Query: 63 FERAP-RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLV 121
FE + RL++V VG DN+D+ AT+ G V N P T A A+ ALL A AR++
Sbjct: 103 FESSRGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIA 162
Query: 122 KGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYS 181
+ D ++G+W + ++G + GKT+ ++GFG++G +A+RARG M ++ +
Sbjct: 163 QADASIKAGKWTRNK-------YVGVSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHD 215
Query: 182 RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVA 241
+ + + E + + +DF+ L +PL T M+N+ MMK+ ++NVA
Sbjct: 216 PYAPADRARAIGVELVSFEVAISTADFISLHLPLTAATSKMMNDVTFAMMKKGVRIVNVA 275
Query: 242 RGKVIDTKALIKALKEGWIAGAGLDVYE-EEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
RG VID +AL++AL G +A A LDV+ E P + +L ++V TPH+G++T A+EG
Sbjct: 276 RGGVIDEEALLRALDSGIVAQAALDVFTVEPPVKDNKLVLHESVTATPHLGASTMEAQEG 335
Query: 301 MAKLVAENLIAFKRGEVPPTLVNR-----EVLKVRKP 332
++ VAE +I RGE+ T VN EVL+ KP
Sbjct: 336 VSIEVAEAVIGALRGELAATAVNAPMVPLEVLRELKP 372
>pir||A72390 hypothetical protein TM0327 - Thermotoga maritima (strain MSB8)
>gi|4980828|gb|AAD35414.1|AE001714_5 (AE001714)
phosphoglycerate dehydrogenase, putative [Thermotoga
maritima]
Length = 327
Score = 199 bits (502), Expect = 3e-50
Identities = 119/297 (40%), Positives = 182/297 (61%), Gaps = 17/297 (5%)
Query: 44 VKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTD 103
+K+VDAL+ + + E+ E + L+I+A + VG DNID+E ATK+GI VT T G +
Sbjct: 40 LKEVDALIVG-THPVTAEMVENSS-LKIIAKHGVGVDNIDLEAATKKGIPVTITAGANSL 97
Query: 104 ATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKW--FLGYDVYGKTIGIIGFGR 161
+ A+L A + A +R LV W + +W +G +V GKT+G++GFG
Sbjct: 98 SVAELTIAFIFALSRGLV----------WAHNKLFLERRWEGTVGQEVSGKTLGVVGFGS 147
Query: 162 IGQAIAKRARGFDMRILYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETY 220
IG+ + K+A M +L Y + + L A L++LL+ESDFV L VPLN+ T
Sbjct: 148 IGREVVKKAVCLGMNVLVYDPYVSKDSVRLLEATPVDDLEQLLKESDFVSLHVPLNESTK 207
Query: 221 HMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEE-PYYNEELF 279
+MI E L +MK++A LIN +RG+++D +AL+KALKEG IAGA LDV+ EE P N LF
Sbjct: 208 NMIGERELSLMKKSAFLINTSRGELVDEEALVKALKEGRIAGAALDVFSEEPPDANSPLF 267
Query: 280 SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKV-RKPGFQ 335
N++ T HIG+ T A M + A++++ F +G +P +VN+EV+++ ++ G+Q
Sbjct: 268 ECPNLITTAHIGAHTKEAIFRMNMMAAQSIVDFFKGRIPRYVVNKEVIRILKEKGYQ 324
>dbj|BAB05321.1| (AP001512) D-3-phosphoglycerate dehydrogenase [Bacillus halodurans]
Length = 540
Score = 198 bits (498), Expect = 8e-50
Identities = 109/299 (36%), Positives = 173/299 (57%), Gaps = 12/299 (4%)
Query: 42 EKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVL 101
+ + + DAL+ + + E+ E+ L+I+A VG DNID++ ATK GI V N P
Sbjct: 51 DDLHEYDALLVRSATTVTEELMEKMSSLKIIARAGVGVDNIDIDAATKHGIVVVNAPDGN 110
Query: 102 TDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGR 161
T +TA+ FA++ + R + + + ++GEWK++ F G ++ GKT+GIIGFGR
Sbjct: 111 TISTAEHTFAMICSLLRKIPQANASIKAGEWKRKA-------FQGTELRGKTLGIIGFGR 163
Query: 162 IGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYH 221
IG IAKRA+ F+M + ++L LD++L+ +D + + PL KET
Sbjct: 164 IGSQIAKRAKAFEMTPYVFDPFLTKARAEKLGVTVASLDDVLQVADIITVHTPLTKETKG 223
Query: 222 MINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSL 281
++ + + K+ LIN ARG +ID +AL L+EG IAGA LDV+EEEP +EEL +
Sbjct: 224 LLGMKNIGKTKKGVFLINCARGGIIDEEALKHYLREGHIAGAALDVFEEEPVADEELLAF 283
Query: 282 DNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN-----REVLKVRKPGFQ 335
DNV+ TPHI ++T A+ +A+ V++ ++ F G +N +EV + KP ++
Sbjct: 284 DNVIATPHIAASTKEAQLNVAEQVSQEVLHFLEGNPVSNSINLPTLSKEVYEKVKPYYE 342
>gi|11499368 2-hydroxyacid dehydrogenase, putative [Archaeoglobus fulgidus]
>gi|7431350|pir||B69472 2-hydroxyacid dehydrogenase
homolog - Archaeoglobus fulgidus
>gi|2648765|gb|AAB89467.1| (AE000979) 2-hydroxyacid
dehydrogenase, putative [Archaeoglobus fulgidus]
Length = 323
Score = 198 bits (497), Expect = 1e-49
Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 16/299 (5%)
Query: 31 DEREIPREILLEKVKDVDALVTMLSERID--REVFERAPRLRIVANYAVGYDNIDVEEAT 88
DER I LE V+D D ++ + +I E+ +++++ + GY+NIDVE A
Sbjct: 36 DERRI-----LEAVRDADIVIGDYTFKIPITEEMMRAMEKVKLIQQPSTGYNNIDVEAAK 90
Query: 89 KRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLG-Y 147
K I V N GV + A+ LA R L+ SG W++ +A LG Y
Sbjct: 91 KLSITVANVGGVNALSVAEHTVMFALALLRRLIYAHNSVLSGRWEQDEMA-----NLGVY 145
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESD 207
+++GKT GIIG G G+ + KR +G+ ++I+Y+ R ++E E EF+ D LLRE+D
Sbjct: 146 ELHGKTWGIIGMGAQGREVTKRLQGWGVKIIYHDVRRAEDIE-EYGVEFRDFDALLREAD 204
Query: 208 FVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDV 267
V L VPL +ET MI E LKMMK +AILINVARG+V+D AL++A+KE WIAGA LDV
Sbjct: 205 IVSLHVPLTEETRGMIGERELKMMKNSAILINVARGEVVDENALVRAIKERWIAGAALDV 264
Query: 268 YEEEPYYNEELFSL--DNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNR 324
+ +EP EL L NV+ TPHI AT AR + + EN+ RGE +V+R
Sbjct: 265 FAKEPPEGSELLELKSHNVIFTPHIAGATNEARLRIIREAMENIGRALRGEEVKHVVSR 323
>gb|AAC71709.1| (AF061070) PtxD [Pseudomonas stutzeri]
Length = 336
Score = 197 bits (495), Expect = 2e-49
Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 14/330 (4%)
Query: 4 PRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
P++ IT + + +++L E+ + + + RE +L + +D A++ + +R+D +
Sbjct: 3 PKLVITHRVHDEILQLLAPHCELMTNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFL 62
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
+ P LR+V G+DN DV+ T RG+++T P +LT TA+LA L + RHL
Sbjct: 63 QACPELRVVGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAA 122
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY-SR 182
D F RSGE++ W P+ F G + T+GI+G G IG A+A R +G+ + Y+ ++
Sbjct: 123 DAFVRSGEFQ----GWQPQ-FYGTGLDNATVGILGMGAIGLAMADRLQGWGATLQYHEAK 177
Query: 183 TRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVAR 242
+ E+ L EL SDF++LA+PLN +T H++N E L +++ A+L+N R
Sbjct: 178 ALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTQHLVNAELLALVRPGALLVNPCR 237
Query: 243 GKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--------LFSLDNVVLTPHIGSAT 294
G V+D A++ AL+ G + G DV+E E + + L + N + TPHIGSA
Sbjct: 238 GSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPRLIDPALLAHPNTLFTPHIGSAV 297
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVNR 324
R + + A+N+I G P NR
Sbjct: 298 RAVRLEIERCAAQNIIQVLAGARPINAANR 327
>sp|P73821|SERA_SYNY3 D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|7431369|pir||S75016
phosphoglycerate dehydrogenase - Synechocystis sp.
(strain PCC 6803) >gi|1652961|dbj|BAA17878.1| (D90910)
phosphoglycerate dehydrogenase [Synechocystis sp.]
Length = 554
Score = 196 bits (492), Expect = 4e-49
Identities = 105/305 (34%), Positives = 178/305 (57%), Gaps = 10/305 (3%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V ++ I +VGI++L++ +V+V + + +++ V + DA++ + ++ ++ +
Sbjct: 31 KVLVSDSIDQVGIDILKQVAQVDV---KTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQ 87
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
+L+I+ VG DNIDV AT++GI V N+P T A A+ A A+++A ARH+ +
Sbjct: 88 AGSQLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDAN 147
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR 184
K + +W++ K F+G +VY KT+G++G G+IG +A A+ M++L Y
Sbjct: 148 KSVKESKWER-------KQFIGTEVYKKTLGVVGLGKIGSHVAGVAKAMGMKLLAYDPFI 200
Query: 185 KPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGK 244
E ++ LD L E+DF+ L +P ET ++IN E L MK TA +IN +RG
Sbjct: 201 SQERADQIGCTLVDLDLLFSEADFITLHIPKTPETANLINAETLAKMKPTARIINCSRGG 260
Query: 245 VIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKL 304
+ID +AL+ A++ I GA LDV+ +EP L NV+LTPH+G++T A+ +A
Sbjct: 261 IIDEEALVTAIETAQIGGAALDVFAQEPLGESRLREFSNVILTPHLGASTEEAQVNVAVD 320
Query: 305 VAENL 309
VAE +
Sbjct: 321 VAEQI 325
>gb|AAF53929.1| (AE003668) CG9331 gene product [Drosophila melanogaster]
Length = 248
Score = 193 bits (485), Expect = 3e-48
Identities = 109/244 (44%), Positives = 150/244 (60%), Gaps = 7/244 (2%)
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
+ G D +DV E +R I + +TP VL A ADLA LL+A +R +G K + +W+
Sbjct: 2 SAGIDYVDVPEVKRRKIPLGHTPTVLNTAVADLAVGLLIAASRRFHEGRKTIDNDKWEN- 60
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYYSRTR-KPEVEKELN 193
+H W LG D+ T+G GFG IGQAIAKR GFD+ ++LY +R R E+E+E N
Sbjct: 61 ---YHLNWLLGQDIRDSTVGFYGFGGIGQAIAKRLSGFDIDKVLYTTRRRVHKEIEEEFN 117
Query: 194 AEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
A+ D LL ESDFVV+A PL K+T + N MK+TA+L+N+ARGK+++ L +
Sbjct: 118 AKKVDFDTLLAESDFVVIASPLTKDTQGVFNATAFNKMKQTAVLVNIARGKIVNQDDLYE 177
Query: 254 ALKEGWIAGAGLDVYEEEPYY-NEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
ALK I AGLDV + EP ++L +LDNVV+ PHIGSAT R M+ + A N++
Sbjct: 178 ALKANRIFSAGLDVTDPEPLSPKDKLLTLDNVVVLPHIGSATKRTRADMSTIAAHNVLRG 237
Query: 313 KRGE 316
GE
Sbjct: 238 LAGE 241
>pir||C81362 phosphoglycerate dehydrogenase (EC 1.1.1.95) Cj0891c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968329|emb|CAB73149.1| (AL139076)
D-3-phosphoglycerate dehydrogenase [Campylobacter
jejuni]
Length = 527
Score = 192 bits (482), Expect = 6e-48
Identities = 109/334 (32%), Positives = 180/334 (53%), Gaps = 10/334 (2%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
K ++ + I + G+++L K ++E+ E + P++ L++ + D++ +T S +D
Sbjct: 2 KKKIIVCDAILDKGVDILRKAEDIELIEAAK-FPKDELMQMLSDIEVAITRSSTDVDVNF 60
Query: 63 FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK 122
A +L+ + VG DN+D+ E +KRG+ V N P T A +L A LL +AR V
Sbjct: 61 LNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIAAVELTMAHLLTSARSFVN 120
Query: 123 GDKFTR-SGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYS 181
F + +W++ KW+ G ++ KT+G+IGFG IG +A RA+ F M+IL Y
Sbjct: 121 AHNFLKIERKWERE------KWY-GIELMNKTLGVIGFGNIGSRVAIRAKAFGMKILAYD 173
Query: 182 RTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
+L+ E K LDE+L +SDF+ + P KET MI ++ + MK LIN
Sbjct: 174 PYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGKQEIAKMKDGIRLINC 233
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREG 300
ARG + +AL + LK G IA G+DV+++EP N L +N+ +T H+G+ T +++
Sbjct: 234 ARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFENISVTSHLGANTLESQDN 293
Query: 301 MAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGF 334
+A+ E ++ RG P +N + P F
Sbjct: 294 IAREACEQALSAARGVAYPNALNLPIKTEDLPPF 327
>pir||A75414 D-3-phosphoglycerate dehydrogenase - Deinococcus radiodurans
(strain R1) >gi|6459038|gb|AAF10861.1|AE001976_4
(AE001976) D-3-phosphoglycerate dehydrogenase
[Deinococcus radiodurans]
Length = 544
Score = 189 bits (474), Expect = 5e-47
Identities = 109/299 (36%), Positives = 169/299 (56%), Gaps = 11/299 (3%)
Query: 35 IPREILLEKVKDVDALVTMLSERIDREVFERA-PRLRIVANYAVGYDNIDVEEATKRGIY 93
+ RE L ++ D DAL+T ++DRE+ + A PRL+++ VG DNID+E A++RG+
Sbjct: 46 LEREETLRRLPDYDALITRSRTKVDRELLDAAGPRLKVIGRGGVGVDNIDLEYASRRGLL 105
Query: 94 VTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKT 153
V N P + A+LA L+A AR L + D+ TR+GEW ++ FLG ++ KT
Sbjct: 106 VLNAPESNNVSAAELAVMHLMAAARGLTRSDRKTRAGEWDRK--------FLGLELTDKT 157
Query: 154 IGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLA 212
+GI+G GRIG +A RA+G M ++ Y + L + LDELL + D + +
Sbjct: 158 LGIVGLGRIGSIVADRAQGLHMNVVAYDPYVPENKFERLGVQRAASLDELLGQVDALTVH 217
Query: 213 VPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272
PL ET MI E L ++KR AI++N ARG +I+ +AL+ AL G + AG+DV+ +EP
Sbjct: 218 TPLTDETRGMIGERELALLKRDAIVVNAARGGIIEEQALVNALHAGHLFAAGVDVFVDEP 277
Query: 273 YYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKVR 330
E +F N+ +T H+G+ T A+E + + ++ G+V VN L +
Sbjct: 278 PTAEHIFLGAPNLGITAHLGANTREAQERVGAEIVSRVLDALHGDVSKGAVNAPALDAK 336
>sp|P35136|SERA_BACSU D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|7427681|pir||C69705
phosphoglycerate dehydrogenase (EC 1.1.1.95) serA -
Bacillus subtilis >gi|1146196|gb|AAC83943.1| (L47648)
phosphoglycerate dehydrogenase [Bacillus subtilis]
>gi|2634742|emb|CAB14239.1| (Z99116) phosphoglycerate
dehydrogenase [Bacillus subtilis]
Length = 525
Score = 188 bits (472), Expect = 9e-47
Identities = 103/312 (33%), Positives = 177/312 (56%), Gaps = 13/312 (4%)
Query: 5 RVFITREIPEVGIE-MLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
RV ++ ++ G++ ++E +F V ++ + E+ DAL+ + ++ ++F
Sbjct: 3 RVLVSDKMSNDGLQPLIESDFIEIVQKNVADAEDEL-----HTFDALLVRSATKVTEDLF 57
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
+ L+IV VG DNID++EATK G+ V N P T +TA+ FA++ + RH+ +
Sbjct: 58 NKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQA 117
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+ +S EW + ++G ++YGKT+GI+G GRIG IA+R F M + +
Sbjct: 118 NISVKSREWNRTA-------YVGSELYGKTLGIVGLGRIGSEIAQRRGAFGMTVHVFDPF 170
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
E K++ + +E+L +D + + PL KET ++N+E + K+ LIN ARG
Sbjct: 171 LTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARG 230
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAK 303
+ID AL++AL+ G +AGA LDV+E EP + +L V+ TPH+G++T A+ +A
Sbjct: 231 GIIDEAALLEALENGHVAGAALDVFEVEPPVDNKLVDHPLVIATPHLGASTKEAQLNVAA 290
Query: 304 LVAENLIAFKRG 315
V+E ++ F +G
Sbjct: 291 QVSEEVLQFAKG 302
>gb|AAF79644.1|AC025416_18 (AC025416) F5O11.29 [Arabidopsis thaliana]
>gi|9502370|gb|AAF88077.1|AC025417_5 (AC025417) T12C24.9
[Arabidopsis thaliana]
Length = 323
Score = 185 bits (466), Expect = 5e-46
Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 11/314 (3%)
Query: 2 SKPRVFITREIPEVGI--EMLEKEFEVEVWE-DEREIPREILLEKVKDVDALVTMLSERI 58
S+P V + P + E+L +EF + + E A V +
Sbjct: 5 SEPPVVLLHRPPSLTFMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVISGRLPV 64
Query: 59 DREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATAR 118
E+ P L+I+ +VG D+ID+ +RGI +TN +D AD A LL++ R
Sbjct: 65 TDELLSHLPSLQILVCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLR 124
Query: 119 HLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRIL 178
+ D++ RSG W K G + LG V GK +GI+G G IG +AKR F I
Sbjct: 125 RIPAADRYVRSGNWAKFG-----DFQLGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVIS 179
Query: 179 YYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILI 238
Y SR++K ++ L E +D +VL L ET+H++N E ++++ + ++I
Sbjct: 180 YNSRSQKQSSPYRYYSDILSLAE---NNDVLVLCCSLTDETHHIVNREVMELLGKDGVVI 236
Query: 239 NVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAR 298
NV RGK+ID K ++K L +G I GAGLDV+E EP +ELF LDNVVL+PH AT G+
Sbjct: 237 NVGRGKLIDEKEMVKCLVDGVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFAVATPGSL 296
Query: 299 EGMAKLVAENLIAF 312
+ +A++ NL AF
Sbjct: 297 DNVAQIALANLKAF 310
>pir||T42743 hypothetical protein - fission yeast (Schizosaccharomyces pombe)
>gi|1749578|dbj|BAA13847.1| (D89185) similar to
Saccharomyces cerevisiae ORF YNL274C, EMBL Accession
Number Z71550 [Schizosaccharomyces pombe]
Length = 334
Score = 181 bits (455), Expect = 9e-45
Identities = 115/316 (36%), Positives = 169/316 (53%), Gaps = 24/316 (7%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVK----DVDALVTMLSERI-----DREVFERAP- 67
E L K E++ + D RE L K K +V A+ + + D+E+ + P
Sbjct: 23 EALGKYAELKTYSDGT---REDFLAKCKTEFQNVKAICRTYNSKFYMGIWDKEIIDNLPP 79
Query: 68 RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFT 127
++ + + GY+ +DV T RGI V++ P + DATAD+ L+L R +G
Sbjct: 80 SVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALRGFNQGIFEL 139
Query: 128 RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE 187
W H D GKT+GI+G G IG+ +AKRAR FDM+I+Y++RT PE
Sbjct: 140 HKNNWNANCKPSH-------DPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPE 192
Query: 188 VEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
E E AEF D+LL +SD + L +PLN T H+I + + MKR +++N ARG V+D
Sbjct: 193 EEAE-GAEFVSFDDLLAKSDVLSLNLPLNAHTRHIIGKPEFQKMKRGIVIVNTARGAVMD 251
Query: 248 TKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAE 307
AL++AL EG + AGLDV+EEEP + L + V+L PH+G+ + E K+
Sbjct: 252 EAALVEALDEGIVYSAGLDVFEEEPKIHPGLLENEKVILLPHLGT---NSLETQYKMECA 308
Query: 308 NLIAFKRGEVPPTLVN 323
L+ K G V +L N
Sbjct: 309 VLMNVKNGIVNDSLPN 324
>pir||T41705 probable 2-hydroxyacid dehydrogenase - fission yeast
(Schizosaccharomyces pombe) >gi|3395556|emb|CAA20140.1|
(AL031180) putative 2-hydroxyacid dehydrogenase
[Schizosaccharomyces pombe]
Length = 334
Score = 181 bits (455), Expect = 9e-45
Identities = 114/316 (36%), Positives = 168/316 (53%), Gaps = 24/316 (7%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVK----DVDALVTMLSERIDREVFERA------P 67
E L K E++ + D RE L K K +V A+ + + +F++ P
Sbjct: 23 EALGKYAELKTYSDGT---REDFLAKCKTEFQNVKAICRTYNSKFYMGIFDKEIIDNLPP 79
Query: 68 RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFT 127
++ + + GY+ +DV T RGI V++ P + DATAD+ L+L R +G
Sbjct: 80 SVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALRGFNQGIFEL 139
Query: 128 RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE 187
W H D GKT+GI+G G IG+ +AKRAR FDM+I+Y++RT PE
Sbjct: 140 HKNNWNANCKPSH-------DPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPE 192
Query: 188 VEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
E E AEF D+LL +SD + L +PLN T H+I + + MKR +++N ARG V+D
Sbjct: 193 EEAE-GAEFVSFDDLLAKSDVLSLNLPLNAHTRHIIGKPEFQKMKRGIVIVNTARGAVMD 251
Query: 248 TKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAE 307
AL++AL EG + AGLDV+EEEP + L + V+L PH+G+ + E K+
Sbjct: 252 EAALVEALDEGIVYSAGLDVFEEEPKIHPGLLENEKVILLPHLGT---NSLETQYKMECA 308
Query: 308 NLIAFKRGEVPPTLVN 323
L+ K G V +L N
Sbjct: 309 VLMNVKNGIVNDSLPN 324
>emb|CAA21970.1| (AL033497) YNL274C homologue [Candida albicans]
Length = 342
Score = 181 bits (455), Expect = 9e-45
Identities = 115/322 (35%), Positives = 178/322 (54%), Gaps = 13/322 (4%)
Query: 2 SKPRVFITREIPEVGIEMLEKEFEVEVWEDE---REIPREILLEKVKDVDALVTML---- 54
SKP+V + E + E E EV + E RE + L K D+ +
Sbjct: 6 SKPKVLLVGEFIYSKQKWSELEEIAEVIQSESTTREQFIQDLKTKYNDITCIARTFYSIN 65
Query: 55 -SERIDREVFERAPR-LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFAL 112
+ R D ++ + P+ L+ V++ GYD +DVE T+ G+ V+N + TAD+A L
Sbjct: 66 ETGRFDADLAQHMPKTLKSVSHCGAGYDQVDVEPFTRLGVQVSNVTEPVERPTADVAVFL 125
Query: 113 LLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR- 171
+LA R+ ++G + +GEW G LG+ GK +GI+G G IG+AI R +
Sbjct: 126 VLACMRNFLQGRQILMNGEWPSNGDKEAAGAPLGHTPQGKVVGILGMGGIGRAIRDRLKP 185
Query: 172 -GFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKM 230
GFD RI+YY+R ++ E E AE+ +DEL ++SD +++ VPLN +T H+I++E ++
Sbjct: 186 FGFD-RIVYYNR-KQLSSELEKGAEYVTMDELFKQSDVIIIGVPLNAKTRHLIDKEAIQK 243
Query: 231 MKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHI 290
MK +L+N+ARG +ID K L + +K G I G DV+E EP + EL +L NVV PH+
Sbjct: 244 MKDGVVLVNIARGAIIDEKHLPELIKSGKIGAFGADVFEHEPEVSPELVNLPNVVALPHM 303
Query: 291 GSATFGAREGMAKLVAENLIAF 312
G+ + A M + V N+ F
Sbjct: 304 GTHSVEALTNMEEWVVCNVETF 325
>gb|AAF19554.1|AC005761_2 (AC005761) D-3-phosphoglycerate dehydrogenase [Leishmania major]
Length = 407
Score = 181 bits (454), Expect = 1e-44
Identities = 105/303 (34%), Positives = 167/303 (54%), Gaps = 15/303 (4%)
Query: 35 IPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYV 94
+PR+ LLEK++DV L ++ + + + AP+L + + +G + +D++ AT RG+ V
Sbjct: 39 LPRDTLLEKIRDVHFLGIRSKTQVTQAILDAAPKLLGIGCFCIGTNQVDLDYATTRGVAV 98
Query: 95 TNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTI 154
N+P T + A+L +++ +R + + + G W K V Y+V GKT+
Sbjct: 99 FNSPFANTRSVAELVIGEIISLSRKMTQRSEEVHRGVWNKTHVGC-------YEVRGKTV 151
Query: 155 GIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVP 214
GI+G+G IG + A M +++Y P + +F +++LL SDFV + VP
Sbjct: 152 GIVGYGHIGSQVGVLAEALGMNVVFYDVL--PTLAIGNATKFTHINDLLTFSDFVTIHVP 209
Query: 215 LNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY 274
T MI EE++++MK+ + LIN +RG V+D +AL KAL+EG +AGA +DVY EEP
Sbjct: 210 ETDVTKGMIGEEQIRLMKKGSYLINASRGTVVDLEALAKALREGHLAGAAIDVYPEEPGS 269
Query: 275 NEELF-----SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKV 329
N+EL + NV+LTPH+G +T A+E + V L F + VN L V
Sbjct: 270 NKELHRTPLQGISNVILTPHVGGSTCEAQEAIGVEVGTALAKFVTSGITAGAVNFPEL-V 328
Query: 330 RKP 332
R P
Sbjct: 329 RPP 331
>gi|6324055 Ynl274cp [Saccharomyces cerevisiae]
>gi|1730640|sp|P53839|YN14_YEAST HYPOTHETICAL 38.8 KD
PROTEIN IN MET2-SEC2 INTERGENIC REGION
>gi|2131951|pir||S63248 hypothetical protein YNL274c -
yeast (Saccharomyces cerevisiae)
>gi|1302340|emb|CAA96182.1| (Z71550) ORF YNL274c
[Saccharomyces cerevisiae]
Length = 350
Score = 179 bits (449), Expect = 5e-44
Identities = 119/330 (36%), Positives = 175/330 (52%), Gaps = 25/330 (7%)
Query: 25 EVEVWEDEREIP----REILLEKVKDVDALVTML------------SERIDREVFERAPR 68
E+E D IP RE L +VKD ++ + + R D E+ P
Sbjct: 22 ELEKIADVITIPESTTREQFLREVKDPQNKLSQVQVITRTARSVKNTGRFDEELALALPS 81
Query: 69 LRI-VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFT 127
+ V + GYD IDVE KR I V N P ++++ATAD LLL R+ G++
Sbjct: 82 SVVAVCHTGAGYDQIDVEPFKKRHIQVANVPDLVSNATADTHVFLLLGALRNFGIGNRRL 141
Query: 128 RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYYSRTRKP 186
G W + G A + GYD GKT+GI+G GRIG+ I +R + F +Y++R + P
Sbjct: 142 IEGNWPEAGPACGSPF--GYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLP 199
Query: 187 EVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVI 246
E+E E+ +E L+ SD V + VPLN T+H+IN E ++ MK +++N ARG VI
Sbjct: 200 S-EEEHGCEYVGFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVI 258
Query: 247 DTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVA 306
D +A+ AL+ G I AGLDV+E EP ++EL S+ V+ PH+G+ + R+ M +LV
Sbjct: 259 DEQAMTDALRSGKIRSAGLDVFEYEPKISKELLSMSQVLGLPHMGTHSVETRKKMEELVV 318
Query: 307 EN----LIAFKRGEVPPTLVNREVLKVRKP 332
EN ++ K + P L N + KP
Sbjct: 319 ENAKNVILTGKVLTIVPELQNEDWPNESKP 348
>gb|AAB00105.1| (U01067) NADH-dependent hydroxypyruvate reductase [Cucurbita pepo]
Length = 271
Score = 178 bits (448), Expect = 6e-44
Identities = 109/275 (39%), Positives = 163/275 (58%), Gaps = 25/275 (9%)
Query: 20 LEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVANY 75
+E++ VE+ +++ I E ++ + D D ++ L+E +F R + +N
Sbjct: 1 IEQDCRVEICTEKKTILSVEDIVALIGDKCDGVIGQLTEDWGEVLFSALSRAGRKAFSNM 60
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
AVGY+N+DV A K GI V NTPGVLT+ TA+LA +L LA AR +V+ D+F R+G +
Sbjct: 61 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYD-- 118
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKR-ARGFDMRILYYSRTRKPEVEKELNA 194
W P F+G + G+T+G+IG GRIG A A+ GF M ++Y+ + +EK + A
Sbjct: 119 --GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTA 176
Query: 195 --EF--------------KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILI 238
EF +DE+LRE+D + L L+K T+H++N+E LK MK+ AILI
Sbjct: 177 YGEFLKANGEVPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAILI 236
Query: 239 NVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY 273
N +RG VID AL++ LKE + GLDV+E+EPY
Sbjct: 237 NCSRGPVIDEAALVEHLKENPMFRVGLDVFEDEPY 271
>gi|5729974 phosphoglycerate dehydrogenase; 3-phosphoglycerate dehydrogenase
[Homo sapiens] >gi|6094272|sp|O43175|SERA_HUMAN
D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)
>gi|2674062|gb|AAB88664.1| (AF006043) 3-phosphoglycerate
dehydrogenase [Homo sapiens]
>gi|5771523|gb|AAD51415.1|AF171237_1 (AF171237)
3-phosphoglycerate dehydrogenase [Homo sapiens]
Length = 533
Score = 178 bits (448), Expect = 6e-44
Identities = 94/316 (29%), Positives = 172/316 (53%), Gaps = 17/316 (5%)
Query: 12 IPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRI 71
+ E G++++EK+ + +E L+ +++D + L+ + ++ +V A +L++
Sbjct: 23 LQEGGLQVVEKQ----------NLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQV 72
Query: 72 VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGE 131
V G DN+D+E AT++GI V NTP + + A+L +++ AR + + + G+
Sbjct: 73 VGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGK 132
Query: 132 WKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKE 191
W++ K F+G ++ GKT+GI+G GRIG+ +A R + F M+ + Y PEV
Sbjct: 133 WER-------KKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSAS 185
Query: 192 LNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKAL 251
+ PL+E+ DF+ + PL T ++N+ K+ ++N ARG ++D AL
Sbjct: 186 FGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGAL 245
Query: 252 IKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIA 311
++AL+ G AGA LDV+ EEP + L +NV+ PH+G++T A+ + +A +
Sbjct: 246 LRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVD 305
Query: 312 FKRGEVPPTLVNREVL 327
+G+ +VN + L
Sbjct: 306 MVKGKSLTGVVNAQAL 321
>gi|11422415 phosphoglycerate dehydrogenase [Homo sapiens]
Length = 569
Score = 178 bits (446), Expect = 1e-43
Identities = 90/297 (30%), Positives = 165/297 (55%), Gaps = 7/297 (2%)
Query: 31 DEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKR 90
+++ + +E L+ +++D + L+ + ++ +V A +L++V G DN+D+E AT++
Sbjct: 68 EKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRK 127
Query: 91 GIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVY 150
GI V NTP + + A+L +++ AR + + + G+W++ K F+G ++
Sbjct: 128 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER-------KKFMGTELN 180
Query: 151 GKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVV 210
GKT+GI+G GRIG+ +A R + F M+ + Y PEV + PL+E+ DF+
Sbjct: 181 GKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFIT 240
Query: 211 LAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEE 270
+ PL T ++N+ K+ ++N ARG ++D AL++AL+ G AGA LDV+ E
Sbjct: 241 VHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTE 300
Query: 271 EPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVL 327
EP + L +NV+ PH+G++T A+ + +A + +G+ +VN + L
Sbjct: 301 EPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQAL 357
>sp|O08651|SERA_RAT D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)
>gi|1944614|emb|CAA66374.1| (X97772)
D-3-phosphoglycerate dehydrogenase [Rattus norvegicus]
>gi|7688285|emb|CAB89828.1| (AJ271975)
3-phosphoglycerate dehydrogenase [Rattus norvegicus]
Length = 533
Score = 176 bits (443), Expect = 2e-43
Identities = 90/297 (30%), Positives = 164/297 (54%), Gaps = 7/297 (2%)
Query: 31 DEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKR 90
+++ + +E L+ +++D + L+ + ++ +V A +L++V G DN+D+E AT++
Sbjct: 32 EKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRK 91
Query: 91 GIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVY 150
G+ V NTP + + A+L +L+ AR + + + G+W + K F+G ++
Sbjct: 92 GVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDR-------KKFMGTELN 144
Query: 151 GKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVV 210
GKT+GI+G GRIG+ +A R + F M+ + Y PEV + PL+E+ DF+
Sbjct: 145 GKTLGILGLGRIGREVAARMQAFGMKTVGYDPIISPEVAASFGVQQLPLEEIWPLCDFIT 204
Query: 211 LAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEE 270
+ PL T ++N+ K+ ++N ARG ++D AL++AL+ G AGA LDV+ E
Sbjct: 205 VHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTE 264
Query: 271 EPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVL 327
EP + L +NV+ PH+G++T A+ + +A + +G+ +VN + L
Sbjct: 265 EPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQAL 321
>pir||T19602 hypothetical protein C31C9.2 - Caenorhabditis elegans
>gi|3874647|emb|CAB05694.1| (Z83219) contains similarity
to Pfam domain: PF00389 (D-isomer specific 2-hydroxyacid
dehydrogenases), Score=247.0, E-value=2.5e-101, N=1~cDNA
EST EMBL:T00729 comes from this gene~cDNA EST yk636a9.3
comes from this gene~cDNA EST yk636a9.5 comes from th>
Length = 322
Score = 176 bits (441), Expect = 4e-43
Identities = 103/330 (31%), Positives = 186/330 (56%), Gaps = 12/330 (3%)
Query: 1 MSKP--RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERI 58
MS P +V I +I + +++L K+ +EV ++ E+L+ + DA++ + +I
Sbjct: 1 MSAPINKVLIADDIEQECVDIL-KQNGIEVTVKTKQTKDELLVT-LPQHDAVIVRSATKI 58
Query: 59 DREVFER-APRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
E+ A +L++V G DNIDV A+ I V NTP + + A+L L+L+ +
Sbjct: 59 TAELLAASAGKLKLVGRAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLS 118
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
RH+ + ++G+W ++ F+G +VYG+T+ ++G GRIG +A R + F M++
Sbjct: 119 RHVPQAAASMKAGKWARKD-------FMGEEVYGRTLAVLGLGRIGSEVAVRLQAFGMKV 171
Query: 178 LYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
+ + E + N E L+++ ++D++ + VPL K+T ++IN+E L K+ +
Sbjct: 172 IGFDPMVTKEQAEAKNIELLSLEQIWPQADYITVHVPLIKQTENLINKETLAKCKKGVRI 231
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
INVARG +++ L+++L G GA DV+E+EP EL V+ TPH+G++T A
Sbjct: 232 INVARGGIVNEVDLVESLNAGHAKGAAFDVFEQEPPTFRELIDHPLVIATPHLGASTIDA 291
Query: 298 REGMAKLVAENLIAFKRGEVPPTLVNREVL 327
+ +A +A+N++ + +G + L REVL
Sbjct: 292 QLRVASEIADNIVQYNKGTMLGVLNAREVL 321
>emb|CAB61802.1| (AL133236) putative dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 344
Score = 170 bits (426), Expect = 2e-41
Identities = 101/281 (35%), Positives = 154/281 (53%), Gaps = 8/281 (2%)
Query: 48 DALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATAD 107
DA+V + I +V +R PRL+++ Y VG D++DVE AT+RGI V N P T+A +D
Sbjct: 60 DAIVVQYAA-ITEQVMDRLPRLKVIGRYGVGVDSVDVEAATRRGILVCNVPDYGTEAVSD 118
Query: 108 LAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIA 167
A L L+ AR + + D+ R+G + V P + +G V+G ++G G IG A A
Sbjct: 119 HAIGLALSVARGIPRLDRGVRAGSFDLPAV--RPLYQVGQRVFG----VVGMGLIGAATA 172
Query: 168 KRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEER 227
++A G ++ Y P+ + L ELL + V + PL ++T ++ +
Sbjct: 173 RKAAGLGYDVIAYDSAADPDAQTFRGFRSVGLHELLERAQVVSVHTPLTEQTRGLLGADA 232
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE-LFSLDNVVL 286
M+ AI++N +RG VIDT AL+ ALK G +AGAG+DV+E EP + L S DNVVL
Sbjct: 233 FARMRPDAIVVNTSRGGVIDTGALVDALKRGAVAGAGIDVHEIEPLPRDHPLTSFDNVVL 292
Query: 287 TPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVL 327
TPH+ + + + + EN++ G P +VN E L
Sbjct: 293 TPHLAWYSEESYAELKRRTVENVVDACAGRTPRNVVNPEAL 333
>gb|AAG20511.1| (AE005123) phosphoglycerate dehydrogenase; SerA1 [Halobacterium sp.
NRC-1]
Length = 527
Score = 169 bits (425), Expect = 3e-41
Identities = 108/314 (34%), Positives = 161/314 (50%), Gaps = 13/314 (4%)
Query: 5 RVFITREIPEVGIEML-EKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
RV +T I + G++ L + EV D + LL+ V D AL+ + VF
Sbjct: 2 RVLVTDPIADAGLDRLRDAGHEVTTAYDATG---DALLDAVSDAHALIVRSGTAVTDAVF 58
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
E AP L IVA +G DNID++ AT G+ V N P A A+ AL A AR + +
Sbjct: 59 EAAPDLVIVARAGIGVDNIDIDAATDHGVMVANAPAGNVRAAAEHTVALAFAAARSIPQA 118
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+G W K +LG ++ GKT+G++G GR+GQ +A R M ++ Y
Sbjct: 119 HARLDAGSWAKDD-------YLGTELSGKTLGVVGLGRVGQEVATRLDSLGMDLVAYDPY 171
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
+ +L AE ++ + +DF+ + VPL ET +I E L M +INVARG
Sbjct: 172 IGEDRAAQLGAELVDIETCVARADFLTIHVPLTDETDGLIGEAELARMD-GGYVINVARG 230
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMA 302
V+D AL A ++G IAGA LDV+ EP L D+++ TPH+G++T A+E +A
Sbjct: 231 GVVDEDALADAAQDGVIAGAALDVFRTEPLPAASPLHDADSIITTPHLGASTKAAQENVA 290
Query: 303 KLVAENLIAFKRGE 316
A+ ++A G+
Sbjct: 291 TDTADQVVAALAGD 304
>pir||G70363 D-lactate dehydrogenase - Aquifex aeolicus
>gi|2983307|gb|AAC06898.1| (AE000704) D-lactate
dehydrogenase [Aquifex aeolicus]
Length = 334
Score = 169 bits (424), Expect = 4e-41
Identities = 101/297 (34%), Positives = 162/297 (54%), Gaps = 35/297 (11%)
Query: 43 KVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLT 102
++K + + + +++ E+ + PRL+++ +VG+D+ID++ K+GI VT+ P
Sbjct: 39 ELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSP 98
Query: 103 DATADLAFALLLATARHL------VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 156
++ A+ FA++L + L VK F++ E L ++ T+G+
Sbjct: 99 ESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSE------------ILARELNRLTLGV 146
Query: 157 IGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLN 216
IG GRIG +A F M++L Y ++ ++ KE + LDELL+ESD + L VP
Sbjct: 147 IGTGRIGSRVAMYGLAFGMKVLCYDVVKREDL-KEKGCVYTSLDELLKESDVISLHVPYT 205
Query: 217 KETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY--- 273
KET+HMINEER+ +MK LIN ARGKV+DT AL +A + G +G GLDV+E+E
Sbjct: 206 KETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILIL 265
Query: 274 --YNE-----------ELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEV 317
Y E EL DNV++TPHI T + E + + + + AF +G++
Sbjct: 266 KKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDL 322
>pir||T00876 hypothetical protein F17K2.16 - Arabidopsis thaliana
>gi|2979553|gb|AAC06162.1| (AC003680) putative glycerate
dehydrogenase [Arabidopsis thaliana]
Length = 327
Score = 169 bits (424), Expect = 4e-41
Identities = 100/315 (31%), Positives = 167/315 (52%), Gaps = 15/315 (4%)
Query: 4 PRVFITREIPEVGIE----MLEKEFEV-EVWEDEREIPREILLEKVKDVDALVTMLSERI 58
PRV I + + + + +FE+ + +E +P E L + A++ ++ +
Sbjct: 11 PRVLIVKRPDAMAVLGDGFVASTKFEILKAFESPLPLP-EFLAYHSDSISAIIAPVAAPV 69
Query: 59 DREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATAR 118
++ P LR+V + G D++D+ E +RGI V N ++ AD A LL+ R
Sbjct: 70 TADLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSEDVADTAVGLLIDVFR 129
Query: 119 HLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRIL 178
+ ++F + W +G + LG + K IGI+G G IG +A R F +I
Sbjct: 130 RISAANRFVKQRFWPLKG-----DYPLGSKLGRKRIGIVGLGSIGSKVATRLDAFGCQIS 184
Query: 179 YYSRTRKP-EVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
Y SR RKP +V + ++E+ SD +++ LN++T +IN++ L + + ++
Sbjct: 185 YSSRNRKPYDVPYHY---YMDIEEMAANSDALIICCELNEKTLRLINKDVLSALGKRGVI 241
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
+NVARG +ID + +++ L+EG I GAGLDV+E+EP +ELF LDNVV +PH T
Sbjct: 242 VNVARGAIIDEEEMVRCLREGEIGGAGLDVFEDEPNVPKELFELDNVVFSPHSAFMTLEG 301
Query: 298 REGMAKLVAENLIAF 312
E + K+V N+ AF
Sbjct: 302 LEELGKVVVGNIEAF 316
>pir||C70645 hypothetical protein Rv0728c - Mycobacterium tuberculosis (strain
H37RV) >gi|3261700|emb|CAB06474.1| (Z84395) hypothetical
protein Rv0728c [Mycobacterium tuberculosis]
Length = 326
Score = 169 bits (423), Expect = 5e-41
Identities = 116/332 (34%), Positives = 175/332 (51%), Gaps = 18/332 (5%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEV--EVWEDEREI---PREILLEKVKDVDALVTML-SE 56
+PR +T + G L + +V + W D+R + E L +++ V A V ++ S+
Sbjct: 4 RPRALVTAPLRGPGFAQLRRLADVVYDPWIDQRPLRIYSAEQLADRITAVAADVLVVESD 63
Query: 57 RIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLAT 116
+ VFER LR+VA N+D+ AT GI V +TP DA A++ ALLLA
Sbjct: 64 SVGGPVFERG--LRVVAATRGDPSNVDIPGATAAGIPVLHTPARNADAVAEMTVALLLAV 121
Query: 117 ARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMR 176
ARHL+ D RSG + G + + F G ++ G T G++G G +G+A+ R G +R
Sbjct: 122 ARHLIPADADVRSGNIFRDGTIPYQR-FRGAEIAGLTAGLVGLGAVGRAVRWRLSGLGLR 180
Query: 177 ILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
++ + R LDELL E+D V + + +T MI ++ M+ A+
Sbjct: 181 VIAHDPYRDDAGHS--------LDELLAEADIVSMHAAVTDDTIGMIGAQQFAAMRDGAV 232
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE-LFSLDNVVLTPHIGSATF 295
+N AR ++ DT AL+ AL+ G +A AGLD + E + L S+ NVVLTPHIG AT+
Sbjct: 233 FLNTARSQLRDTDALVDALRGGKLAAAGLDHFTGEWLPTDHPLVSMPNVVLTPHIGGATW 292
Query: 296 GAREGMAKLVAENLIAFKRGEVPPTLVNREVL 327
A++VA++L A G P +VN EVL
Sbjct: 293 NTEARQARMVADDLGALLSGNRPAHVVNPEVL 324
>gi|6320925 3-phosphoglycerate dehydrogenase; Ser3p [Saccharomyces cerevisiae]
>gi|731484|sp|P40054|SERA_YEAST D-3-PHOSPHOGLYCERATE
DEHYDROGENASE 1 (PGDH) >gi|1077676|pir||S50584 probable
phosphoglycerate dehydrogenase (EC 1.1.1.95) YER081w -
yeast (Saccharomyces cerevisiae)
>gi|603319|gb|AAB64636.1| (U18839) Yer081wp
[Saccharomyces cerevisiae]
Length = 469
Score = 166 bits (416), Expect = 3e-40
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 5 RVFITREIPEVGIEMLEKE-FEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
++ + + + I + E++ ++VE ++ +P E L+EK+KDV A+ R+ V
Sbjct: 60 KILLLENVNQTAITIFEEQGYQVEFYKSS--LPEEELIEKIKDVHAIGIRSKTRLTSNVL 117
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
+ A L + + +G + +D++ AT RGI V N+P + + A+L A +++ AR L
Sbjct: 118 QHAKNLVCIGCFCIGTNQVDLDYATSRGIAVFNSPFSNSRSVAELVIAEIISLARQLGDR 177
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+G W K ++V GKT+GIIG+G IG ++ A + +LYY
Sbjct: 178 SIELHTGTWNKVAARC-------WEVRGKTLGIIGYGHIGSQLSVLAEAMGLHVLYYDIV 230
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
+ + LDELL +SDFV L VP ET M++ + MK A +IN +RG
Sbjct: 231 TIMALGTA--RQVSTLDELLNKSDFVTLHVPATPETEKMLSAPQFAAMKDGAYVINASRG 288
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYN-------------EELFSLDNVVLTPHI 290
V+D +LI+A+K IAGA LDVY EP N EL SL N++LTPHI
Sbjct: 289 TVVDIPSLIQAVKANKIAGAALDVYPHEPAKNGEGSFNDELNSWTSELVSLPNIILTPHI 348
Query: 291 GSATFGAREGMAKLVAENL 309
G +T A+ + VA L
Sbjct: 349 GGSTEEAQSSIGIEVATAL 367
>pir||JC7190 D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) - human
>gi|5852418|gb|AAD54066.1|AF113251_1 (AF113251) putative
2-hydroxyacid dehydrogenase [Homo sapiens]
Length = 248
Score = 165 bits (414), Expect = 6e-40
Identities = 106/250 (42%), Positives = 137/250 (54%), Gaps = 12/250 (4%)
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTD---ATADLAFALLLATARHLVKGDKFTRSGEW 132
+VG D++ ++E KRGI V TP VLT T L L +G S EW
Sbjct: 2 SVGIDHLALDEIKKRGIRVGYTPDVLTRYHRRTRSLPATYHLPPVAGGHRG-----SEEW 56
Query: 133 KKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYYSRTRKPEVEKE 191
+W P W GY + T+GIIG GRIGQAIA+R + F + R LY R +PE E
Sbjct: 57 W--WTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE 114
Query: 192 LNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKAL 251
AEF EL +SDF+V+A L T + N++ + MK TA+ IN++RG V++ L
Sbjct: 115 FQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDL 174
Query: 252 IKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLI 310
+AL G IA AGLDV EP N L +L N V+ PHIGSAT R M+ L A NL+
Sbjct: 175 YQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLL 234
Query: 311 AFKRGEVPPT 320
A RGE P+
Sbjct: 235 AGLRGEPMPS 244
>emb|CAC11910.1| (AL445065) 2-hydroxyacid dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 309
Score = 165 bits (414), Expect = 6e-40
Identities = 99/275 (36%), Positives = 150/275 (54%), Gaps = 11/275 (4%)
Query: 46 DVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDAT 105
D + L+ ++ ++ ++ PRLR V ++GYDN+D+ K GI V+N P D+
Sbjct: 39 DAEILIVTTFTPVNGDLLKKMPRLRFVQVASIGYDNVDMNAMKKNGIMVSNIPTASADSV 98
Query: 106 ADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQA 165
A+ A +++L+ + D RSG W P+ D+ GKT GI+G G IG+A
Sbjct: 99 AEHALSMVLSLIKDQRFLDAEIRSGRW--------PRITRSSDLMGKTFGIVGMGSIGRA 150
Query: 166 IAKRARGFDMRILYYSRTRKPEVEKE-LNAEFKPLDELLRESDFVVLAVPLNKETYHMIN 224
+A R F + I+Y R E E+E A F LD LL +SD + + VPLN+ T HM N
Sbjct: 151 LAARLLPFKVAIIYNDTKRMSEAEEEEYGATFVSLDRLLSDSDVISVHVPLNETTRHMFN 210
Query: 225 EERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEE-PYYNEELFSLDN 283
R +MK AI IN +RG+V+ K LI+A+++ I AGLDV+E E P N LF L+N
Sbjct: 211 SSRFGLMKDGAIFINTSRGEVVVEKDLIEAIQKKGIR-AGLDVFEHEPPDPNSPLFRLEN 269
Query: 284 VVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVP 318
+ +PHI T ++ + N++ + +G P
Sbjct: 270 TLFSPHIAGVTAESQMRFFRETIANVMRYMQGYDP 304
>sp|Q61753|SERA_MOUSE D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) (A10)
>gi|986918|gb|AAB67986.1| (L21027) A10 [Mus musculus]
Length = 485
Score = 165 bits (413), Expect = 8e-40
Identities = 86/280 (30%), Positives = 151/280 (53%), Gaps = 7/280 (2%)
Query: 48 DALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATAD 107
+ L+ + ++ +V A +L++V G DN+D+E T++GI V NTP + + A+
Sbjct: 1 EGLIVRSATKVTADVINAAEKLQVVGRAVTGVDNVDLEPPTRKGILVMNTPNGNSLSAAE 60
Query: 108 LAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIA 167
L +++ AR + + + G+W + K F+G ++ GKT+GI+G GRIG+ +A
Sbjct: 61 LTCGMIMCLARQIPQTTASMKDGKWDR-------KKFMGTELNGKTLGILGLGRIGREVA 113
Query: 168 KRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEER 227
R + F M+ + Y PEV + PL+E+ DF+ + PL T ++N+
Sbjct: 114 TRMQSFGMKTVGYDPIISPEVAASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDST 173
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLT 287
K+ ++N ARG ++D AL++AL+ G AGA LDV+ EEP + L +NV+
Sbjct: 174 FAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISC 233
Query: 288 PHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVL 327
PH+G++T A+ + +A + +G+ +VN + L
Sbjct: 234 PHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQAL 273
>pir||E64569 phosphoglycerate dehydrogenase - Helicobacter pylori (strain 26695)
>gi|2313497|gb|AAD07461.1| (AE000555) phosphoglycerate
dehydrogenase (serA) [Helicobacter pylori 26695]
Length = 524
Score = 165 bits (413), Expect = 8e-40
Identities = 102/320 (31%), Positives = 165/320 (50%), Gaps = 9/320 (2%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V I I GI++LE + ++ V D + P++ LLEK+ +DAL+T I + +
Sbjct: 3 QVAICDPIHAKGIQILEAQKDI-VLHDYSKCPKKELLEKLTPMDALITRSMTPITSDFLK 61
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL-VKG 123
L+ + VG DNID+E +++GI V N P T A +L A L+ R
Sbjct: 62 PLTHLKSIVRAGVGVDNIDLESCSQKGIVVMNIPTANTIAAVELTMAHLINAVRSFPCAN 121
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
D+ WK+ W+ G ++ K +GIIGFG IG + RA+ F+M +L Y
Sbjct: 122 DQIKHQRLWKRED------WY-GTELKNKKLGIIGFGNIGSRVGIRAKAFEMEVLAYDPY 174
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
+L + E + + D + + P NKET +MI + ++ MK+ IL+N ARG
Sbjct: 175 IPSSKATDLGVIYTKNFEDILQCDMITIHTPKNKETINMIGAKEIERMKKGVILLNCARG 234
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAK 303
+ + AL +AL+ + G+DV+ +EP + +L L NV TPHIG+ T ++E ++K
Sbjct: 235 GLYNEDALYEALETKKVRWLGIDVFSKEPGIHNKLLDLPNVYATPHIGANTLESQEEISK 294
Query: 304 LVAENLIAFKRGEVPPTLVN 323
A+ ++ RG P +N
Sbjct: 295 QAAQGVMESLRGSSHPHALN 314
>pir||C71864 d-3-phosphoglycerate dehydrogenase - Helicobacter pylori (strain
J99) >gi|4155559|gb|AAD06553.1| (AE001527)
D-3-PHOSPHOGLYCERATE DEHYDROGENASE [Helicobacter pylori
J99]
Length = 524
Score = 165 bits (413), Expect = 8e-40
Identities = 103/320 (32%), Positives = 165/320 (51%), Gaps = 9/320 (2%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V I I GI++LE + ++ V D + P++ LLEK+ +DAL+T I + +
Sbjct: 3 QVAICDPIHAKGIQILEAQKDI-VLHDYSKCPKKELLEKLIPMDALITRSMTPITSDFLK 61
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL-VKG 123
L+ + VG DNID+E +++GI V N P T A +L A L+ R
Sbjct: 62 PLTHLKSIVRAGVGVDNIDLESCSQKGIVVMNIPTANTIAAVELTMAHLINAVRSFPCAN 121
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
D+ WK+ W+ G ++ K +GIIGFG IG + RA+ F+M +L Y
Sbjct: 122 DQIKHQRLWKRED------WY-GTELKNKKLGIIGFGNIGSRVGIRAKAFEMEVLAYDPY 174
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
+L + E + + D + + P NKET +MI + ++ MK+ ILIN ARG
Sbjct: 175 IPSSKATDLGVIYTKNFEDILQCDMITIHTPKNKETINMIGAKEIERMKKGVILINCARG 234
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAK 303
+ + AL +AL+ + G+DV+ +EP + +L L NV TPHIG+ T ++E ++K
Sbjct: 235 GLYNEDALYEALETKKVRWLGIDVFSKEPGIHNKLLDLPNVYATPHIGANTLESQEEISK 294
Query: 304 LVAENLIAFKRGEVPPTLVN 323
A+ ++ RG P +N
Sbjct: 295 QAAQGVMESLRGSSHPHALN 314
>dbj|BAA13058.1| (D86240) unknown [Staphylococcus aureus]
Length = 200
Score = 162 bits (407), Expect = 4e-39
Identities = 81/190 (42%), Positives = 122/190 (63%), Gaps = 6/190 (3%)
Query: 35 IPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYV 94
+P++ + ++D DA LSE+ID E+ ++P L+++AN AVGYDNIDVE AT + V
Sbjct: 9 MPKDQFVTALRDADACFITLSEQIDAEILAQSPNLKVIANMAVGYDNIDVESATANNVVV 68
Query: 95 TNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTI 154
TNTP VLT+ TA+L F L+LA AR +V+ +K+ + W+ +W P G DV+ TI
Sbjct: 69 TNTPNVLTETTAELGFTLMLAIARRIVEAEKYVEADAWQ----SWGPYLLSGKDVFNSTI 124
Query: 155 GIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVP 214
GI G G IG+A A+R +GF+ ILY++R+R + E + NA + + LL ES V+ +V
Sbjct: 125 GIYGMGDIGKAFARRLQGFNTNILYHNRSRHKDAEADFNATYVSFETLLAES--VLSSVQ 182
Query: 215 LNKETYHMIN 224
+ + H+IN
Sbjct: 183 RHLQKKHIIN 192
>dbj|BAB12215.1| (AB032549) d-3-phosphoglycerate dehydrogenase [Microcystis
aeruginosa]
Length = 337
Score = 162 bits (406), Expect = 5e-39
Identities = 107/330 (32%), Positives = 169/330 (50%), Gaps = 13/330 (3%)
Query: 1 MSKPRVFITREI-PEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERID 59
+ KPRV + ++ E G ++LE+ +E+ + E + E +++V + +++
Sbjct: 13 IQKPRVLLIGKMYDEAGQKLLEESTNIEILSNPT---LEEINEAIQEVSGVFVRYPNKLE 69
Query: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
A +L++++ G D+ID+ AT++G+ V N PG+ T + A+ +++LA A+
Sbjct: 70 ASSIRLAKQLKVISTSGFGTDSIDIMAATEQGVIVVNNPGMSTTSVAEHTLSMILALAKK 129
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRIL 178
L D + G + R + KT+GI+G GRIG +A + MR+L
Sbjct: 130 LPFLDHCVKKGNYLIRNQ------MQPIQLENKTLGIVGLGRIGTLVAHKCNLALGMRVL 183
Query: 179 YYSRTRKPEVEKELNAEF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
Y + + A + K LD LL ESDFV L L ET M N K MK TA L
Sbjct: 184 AYDPYVPASKAETVGATWVKDLDVLLAESDFVSLHTELTSETREMFNISVFKKMKPTAFL 243
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYE-EEPYYNEELFSLDNVVLTPHIGSATFG 296
IN +RGKV+ K L AL + IAG LDV+E E P + L++ +NV+L+PH+ T
Sbjct: 244 INTSRGKVVCEKDLGIALNQKLIAGCALDVFEPEPPALDNPLYNFENVILSPHLAGVTPE 303
Query: 297 AREGMAKLVAENLIAFKRGEVPPTLVNREV 326
A A A ++ +GE PP ++N EV
Sbjct: 304 ASLAAAVSAANQILQVLQGEKPPYMINPEV 333
>gb|AAF00955.1|AF183408_3 (AF183408) McyI [Microcystis aeruginosa]
Length = 337
Score = 162 bits (405), Expect = 7e-39
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 13/329 (3%)
Query: 1 MSKPRVFITREI-PEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERID 59
+ KPRV + ++ E G ++LE+ +E+ + P EI E +++V + ++
Sbjct: 13 IQKPRVLLIGKMYDEAGQKLLEESTNIEILSNPT--PEEIN-EAIQEVSGVFVRYPNNLE 69
Query: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
A L++++ G D+ID+ AT++G+ V N PG+ T A A+ +++LA A+
Sbjct: 70 ASSIRLAKHLKVISTSGFGTDSIDIMAATEQGVIVVNNPGMSTTAVAEHTLSMILALAKK 129
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRIL 178
L D + G + R + KT+GI+G GRIG +A + MR+L
Sbjct: 130 LPFLDHCVKKGNYLIRNQ------MQPIQLENKTLGIVGLGRIGTLVAHKCNLALGMRVL 183
Query: 179 YYSRTRKPEVEKELNAEF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
Y + + A K LD LL ESDFV L L ET M N K MK TA L
Sbjct: 184 AYDPYVPASKAETVGATLLKDLDVLLAESDFVSLHTELTSETREMFNISVFKKMKPTAFL 243
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYE-EEPYYNEELFSLDNVVLTPHIGSATFG 296
IN +RGKV+ K L AL + I+G LDV+E E P + L++ +NV+L+PH+ T
Sbjct: 244 INTSRGKVVCEKDLGIALNQKLISGCALDVFEPEPPALDNPLYNFENVILSPHLAGVTPE 303
Query: 297 AREGMAKLVAENLIAFKRGEVPPTLVNRE 325
A A A ++ RGE PP ++N E
Sbjct: 304 ASLAAAVSAANQILQVLRGEKPPYMINPE 332
>gb|AAG39286.1|AF113215_1 (AF113215) MSTP035 [Homo sapiens]
Length = 248
Score = 161 bits (403), Expect = 1e-38
Identities = 91/232 (39%), Positives = 134/232 (57%), Gaps = 8/232 (3%)
Query: 5 RVFITREIPEVGIEMLEK--EFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
+VF+TR IP G L + + EVE W+ + IP + L V L+ +LS+ +D+ +
Sbjct: 8 KVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRI 67
Query: 63 FERA-PRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLV 121
+ A L++++ +VG D++ ++E KRGI V TP VLTD TA+LA +LLL T R L
Sbjct: 68 LDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLP 127
Query: 122 KGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDM-RILYY 180
+ + ++G W +W P W GY + T+GIIG GRIGQAIA+R + F + R LY
Sbjct: 128 EAIEEVKNGGW----TSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYT 183
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMK 232
R +PE E AEF EL +SDF+V+A L T + N++ + MK
Sbjct: 184 GRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMK 235
>gb|AAC46259.1| (AF006000) D-3-phosphoglycerate dehydrogenase homolog [Bordetella
pertussis]
Length = 399
Score = 160 bits (401), Expect = 2e-38
Identities = 99/303 (32%), Positives = 153/303 (49%), Gaps = 14/303 (4%)
Query: 35 IPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYV 94
+P L E ++ + + +D ++ P LR+V + +G + +D++ A RG+ V
Sbjct: 33 LPSGELREALRGAEVVGIRSRTHLDADLLAANPDLRVVGCFCIGTNQVDLDAAMMRGVPV 92
Query: 95 TNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTI 154
N P T + A+L + R + + + G W K Y+ GKT+
Sbjct: 93 FNAPFSNTRSVAELVLGETILLLRRIPEKNARVHLGHWDKSAAG-------AYEARGKTL 145
Query: 155 GIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVP 214
GI+G+G IG I+ A MR++++ K + A L ELL ++D V L VP
Sbjct: 146 GIVGYGNIGSQISTLAEAIGMRVVFFDVEAKLPLGNARAAG--SLAELLEQADVVTLHVP 203
Query: 215 LNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY 274
K T +++N + L MKR AILIN +RG V+D +AL AL G +AGA LDV+ EP
Sbjct: 204 GGKSTQNIVNADTLARMKRGAILINASRGTVVDIQALHDALASGHLAGAALDVFPTEPKS 263
Query: 275 NEE-----LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKV 329
+E L + NVVLTPHIG +T ++E + + VAE L+ F + + VN L
Sbjct: 264 ADEPLASPLIGMPNVVLTPHIGGSTQESQENIGREVAEKLVRFLQAGTTKSAVNFPELSY 323
Query: 330 RKP 332
+ P
Sbjct: 324 QAP 326
>gb|AAF53080.1| (AE003631) CG6287 gene product [Drosophila melanogaster]
Length = 332
Score = 159 bits (397), Expect = 6e-38
Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 17/331 (5%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V + + + +E+LE+ ++ ++P E L ++VK+ DA + +I EV
Sbjct: 7 KVLVCDAVDKSCVELLEQHGIKVTYK--LKLPVEELCQEVKNFDAAIVRSDTKITAEVLA 64
Query: 65 RAP-RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
L++V G DNIDV AT + + V NTPG + + +L L+ + AR +V
Sbjct: 65 AGSGSLKVVGRAGAGVDNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPA 124
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
+ + G W + K + G ++YGKT+ ++G GRIG+ +A R + + MRI+ Y
Sbjct: 125 GQSMKEGRWDR-------KLYAGTELYGKTLAVLGLGRIGREVAIRMKTWGMRIIGYDPI 177
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
K E L+E+ +D++ + PL T ++I+ E L K+ ++NVARG
Sbjct: 178 TTEAEAKAAGIEKMTLEEIWPLADYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARG 237
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEP---YYNEELFSLDNVVLTPHIGSATFGAREG 300
+ID +A++ L+ G +AGA DVY EEP + L S VV TPH+G++T A+
Sbjct: 238 GIIDEQAVLDGLESGKVAGAAFDVYPEEPPKSAVTKALISHPKVVATPHLGASTSEAQVR 297
Query: 301 MAKLVAENLIAFKRGEVPPT----LVNREVL 327
+A VAE IA T ++N+E L
Sbjct: 298 VAVEVAEQFIALNGTSPKYTSYAGVINKEAL 328
>gb|AAK41187.1| D-3-phosphoglycerate dehydrogenase (serA-1) [Sulfolobus
solfataricus]
Length = 326
Score = 157 bits (394), Expect = 1e-37
Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 14/309 (4%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
+V IT + + I L+ + ++ E I RE LL+ + L+ ++D+E+
Sbjct: 19 KVLITDPVDQYMIRTLQNNGLIVDYKPE--ITREELLKIIDQYQVLIVRSRTKVDKEIIR 76
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
L+I+A +G DNID EEA+KR I + PG TD+ A+L LL+A AR L
Sbjct: 77 YGVNLKIIARAGIGLDNIDTEEASKRNIKIVYAPGASTDSAAELTIGLLIAAARKLYDSM 136
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR 184
+ G +KK G ++ GKTIGI+GFGRIG +AK + DM ++ Y
Sbjct: 137 NMAKGGIFKK---------IEGIELAGKTIGIVGFGRIGTKVAKVCKALDMNVIAYDVIN 187
Query: 185 KPEVEKELNAEF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
E + + L+ELL+ SD + V + K+ ++N++ +K AI+IN +R
Sbjct: 188 IKEKANIVGVRVAESLEELLKNSDVITFHVTVGKDAKPILNKDTFNYIKDNAIIINTSRA 247
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSL--DNVVLTPHIGSATFGAREGM 301
VID KAL++ + + + A ++ E P + E+ L + V++T HIG+ T A+ +
Sbjct: 248 VVIDGKALLEYIDKKHLTYATDVLWNEPPKEDWEIKLLRHERVIVTTHIGAQTKEAQHRV 307
Query: 302 AKLVAENLI 310
A + +NLI
Sbjct: 308 AVVTTDNLI 316
>sp|Q59516|DHGY_METEX GLYCERATE DEHYDROGENASE (NADH-DEPENDENT HYDROXYPYRUVATE REDUCTASE)
(HPR) (GDH) (HYDROXYPYRUVATE DEHYDROGENASE) (GLYOXYLATE
REDUCTASE) (HPR-A)
Length = 314
Score = 156 bits (391), Expect = 3e-37
Identities = 105/320 (32%), Positives = 171/320 (52%), Gaps = 17/320 (5%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVD-ALVTMLSERID 59
M+K VF+ RE + + E F E E E E ++E+++ + A++ + R D
Sbjct: 1 MTKKVVFLDRESLDATVR--EFNFPHEYKEYESTWTPEEIVERLQGAEIAMINKVPMRAD 58
Query: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
++ P L+++A A G D +D A +GI V N + + L+ A R
Sbjct: 59 --TLKQLPDLKLIAVAATGTDVVDKAAAKAQGITVVNIRNYAFNTVPEHVVGLMFALRRA 116
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILY 179
+V R G+W K + + + YD+ G T+GIIG+G +G++IAKRA M++L
Sbjct: 117 IVPYANSVRRGDWNKSKQFCYFDYPI-YDIAGSTLGIIGYGALGKSIAKRAEALGMKVLA 175
Query: 180 YSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILIN 239
+ + + L+ +L +SD + L VPL +T +MI E+LK MKR+AILIN
Sbjct: 176 FDVFPQDGLVD--------LETILTQSDVITLHVPLTPDTKNMIGAEQLKKMKRSAILIN 227
Query: 240 VARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF---SLDNVVLTPHIGSATFG 296
ARG ++D AL++ALK+G I GAG DV +EP + + L N+++TPH+ A+
Sbjct: 228 TARGGLVDEAALLQALKDGTIGGAGFDVVAQEPPKDGNILCDADLPNLIVTPHVAWASKE 287
Query: 297 AREGMAKLVAENLIAFKRGE 316
A + +A + +N+ AF G+
Sbjct: 288 AMQILADQLVDNVEAFVAGK 307
>gi|6322116 3-phosphoglycerate dehydrogenase; Ser33p [Saccharomyces cerevisiae]
>gi|731830|sp|P40510|SE33_YEAST D-3-PHOSPHOGLYCERATE
DEHYDROGENASE 2 (PGDH) >gi|626300|pir||S48370 probable
phosphoglycerate dehydrogenase (EC 1.1.1.95) YIL074c -
yeast (Saccharomyces cerevisiae)
>gi|556873|emb|CAA86096.1| (Z37997) orf, len: 469, CAI:
0.23, similar to SERA_ECOLI P08328 D-3-PHOSPHOGLYCERATE
DEHYDROGENASE [Saccharomyces cerevisiae]
Length = 469
Score = 155 bits (388), Expect = 7e-37
Identities = 97/288 (33%), Positives = 147/288 (50%), Gaps = 22/288 (7%)
Query: 35 IPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYV 94
+P + L+EK+KDV A+ R+ ++ + A L + + +G + +D++ A +GI V
Sbjct: 89 LPEDELIEKIKDVHAIGIRSKTRLTEKILQHARNLVCIGCFCIGTNQVDLKYAASKGIAV 148
Query: 95 TNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTI 154
N+P + + A+L +++ AR L +G W K ++V GKT+
Sbjct: 149 FNSPFSNSRSVAELVIGEIISLARQLGDRSIELHTGTWNKVAARC-------WEVRGKTL 201
Query: 155 GIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVP 214
GIIG+G IG ++ A + +LYY + + LDELL +SDFV L VP
Sbjct: 202 GIIGYGHIGSQLSVLAEAMGLHVLYYDIVTIMALGTA--RQVSTLDELLNKSDFVTLHVP 259
Query: 215 LNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY 274
ET M++ + MK A +IN +RG V+D +LI+A+K IAGA LDVY EP
Sbjct: 260 ATPETEKMLSAPQFAAMKDGAYVINASRGTVVDIPSLIQAVKANKIAGAALDVYPHEPAK 319
Query: 275 N-------------EELFSLDNVVLTPHIGSATFGAREGMAKLVAENL 309
N EL SL N++LTPHIG +T A+ + VA L
Sbjct: 320 NGEGSFNDELNSWTSELVSLPNIILTPHIGGSTEEAQSSIGIEVATAL 367
>sp|P87228|SERA_SCHPO PUTATIVE D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)
>gi|7492817|pir||T41375 probable phosphoglycerate
dehydrogenase - fission yeast (Schizosaccharomyces
pombe) >gi|2213544|emb|CAB09778.1| (Z97052) putative
phosphoglycerate dehydrogenase [Schizosaccharomyces
pombe]
Length = 466
Score = 153 bits (383), Expect = 3e-36
Identities = 99/322 (30%), Positives = 161/322 (49%), Gaps = 25/322 (7%)
Query: 5 RVFITREIPEVGIEMLEKE-FEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVF 63
++ + + + + L+ E ++VE + + + L+EK+K V A+ R+ R V
Sbjct: 57 KILLLENVNQSALSNLKDEGYQVEFLKTS--MSEDDLVEKIKGVHAIGIRSKTRLTRRVL 114
Query: 64 ERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKG 123
E A L ++ + +G + +D++ A +RGI V N+P + + A+L +++ AR +
Sbjct: 115 EAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAELVIGYIISLARQVGDR 174
Query: 124 DKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRT 183
GEW K +++ GKT+GIIG+G IG ++ A + ++YY
Sbjct: 175 SLELHRGEWNKVSSGC-------WEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDIL 227
Query: 184 RKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARG 243
P + + L ELL +DFV L VP + ET +MI+ + MK + LIN +RG
Sbjct: 228 --PIMPLGSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAAMKEGSYLINASRG 285
Query: 244 KVIDTKALIKALKEGWIAGAGLDVYEEEPYYN-------------EELFSLDNVVLTPHI 290
V+D AL+ A K G IAGA +DVY EP N EL N++LTPHI
Sbjct: 286 TVVDIPALVDASKSGKIAGAAIDVYPSEPAGNGKDKFVDSLNSWTSELTHCKNIILTPHI 345
Query: 291 GSATFGAREGMAKLVAENLIAF 312
G +T A+ + V+E L +
Sbjct: 346 GGSTEEAQYNIGIEVSEALTRY 367
>gb|AAD41370.1|AF152006_1 (AF152006) Tcf-3 co-repressor CtBP [Xenopus laevis]
Length = 437
Score = 151 bits (377), Expect = 1e-35
Identities = 103/301 (34%), Positives = 151/301 (49%), Gaps = 15/301 (4%)
Query: 30 EDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATK 89
+ +EI ++L E V + LS RE E+ LRI+ GYDNID++ A +
Sbjct: 60 QSTQEIHEKVLSEAVGALMYHTITLS----REDLEKFKALRIIIKIGSGYDNIDIKSAAE 115
Query: 90 RGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDV 149
GI V N P + TAD +L R + + R G +
Sbjct: 116 LGIAVCNIPSASVEETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARI 175
Query: 150 YGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAE-FKPLDELLRESDF 208
G+T+GIIG GRIGQA+A RA+ F+ +++Y VE+ L + L ELL SD
Sbjct: 176 RGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADGVERSLGLQRMATLQELLMHSDC 235
Query: 209 VVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVY 268
+ L LN+ +H+IN+ +K M++ L+N ARG ++D KAL +ALK+G I GA LDV+
Sbjct: 236 ITLHCNLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKDGRIRGAALDVH 295
Query: 269 EEEPYYNEE--LFSLDNVVLTPHIG----SATFGAREGMAKLVAENLIAFKRGEVPPTLV 322
E EP+ + L N++ TPH A+ ARE AK + + G +P +L
Sbjct: 296 ESEPFSFSQGPLKDAPNLICTPHTAWYSEHASIEAREEAAKEIRRAI----AGPIPDSLR 351
Query: 323 N 323
N
Sbjct: 352 N 352
>sp|P43885|SERA_HAEIN D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|1075144|pir||C64070
phosphoglycerate dehydrogenase (EC 1.1.1.95) -
Haemophilus influenzae (strain Rd KW20)
>gi|1573443|gb|AAC22124.1| (U32729) D-3-phosphoglycerate
dehydrogenase (serA) [Haemophilus influenzae Rd]
Length = 410
Score = 150 bits (375), Expect = 2e-35
Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 22/282 (7%)
Query: 40 LLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
L E +KDV + + E+ E AP+L V + +G + +D+ A RGI V N P
Sbjct: 48 LKEAIKDVHFIGLRSRTHLTAEMIEAAPKLIAVGCFCIGTNQVDLNAAKARGIPVFNAPF 107
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
T + A+L +L R++ + + G W K H +V GK +GIIG+
Sbjct: 108 SNTRSVAELVLGEILLLMRNVPQANAEVHRGVWNKSATGSH-------EVRGKKLGIIGY 160
Query: 160 GRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL---NA-EFKPLDELLRESDFVVLAVPL 215
G IG ++ A M + +Y ++E +L NA + + L+ELL D V L VP
Sbjct: 161 GHIGSQLSIIAESLGMDVYFY------DIENKLPLGNAKQVRSLEELLSSCDVVSLHVPE 214
Query: 216 NKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP-YY 274
T +++N R+ +K+ AILIN ARG V+D AL +ALK+G + GA +DV+ EP
Sbjct: 215 LPSTKNLMNVARIAQLKQGAILINAARGTVVDIDALAQALKDGKLQGAAIDVFPVEPASI 274
Query: 275 NEELFS----LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
NEE S DNV+LTPHIG +T A+E + VA + +
Sbjct: 275 NEEFISPLREFDNVILTPHIGGSTAEAQENIGFEVAGKFVKY 316
>dbj|BAA77337.1| (AB019533) Nad-dependent formate dehydrogenase [Oryza sativa]
Length = 376
Score = 150 bits (375), Expect = 2e-35
Identities = 94/304 (30%), Positives = 161/304 (52%), Gaps = 10/304 (3%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANY 75
E LE + + D++E L + ++D+ L+T + E ++A L ++
Sbjct: 59 EWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTA 118
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
+G D+ID+ A G+ V G T + A+ +L R+ + G + GEW
Sbjct: 119 GIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVA 178
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR-KPEVEKELNA 194
G+A+ YD+ GKT+G +G GRIG+ + +R + F+ +LY+ R + PE+EKE+ A
Sbjct: 179 GIAYR-----AYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKIDPELEKEIGA 233
Query: 195 EFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
+++ LD +L + D +V+ PL ++T M N+ER+ MK+ I++N ARG ++DT+A+
Sbjct: 234 KYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMDTQAVAD 293
Query: 254 ALKEGWIAGAGLDVYEEEPYYNEELFS-LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
A G +AG G DV+ +P + + N +TPHI T A+ A V + L +
Sbjct: 294 ACSSGQVAGYGGDVWFPQPAPKGPPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRY 353
Query: 313 KRGE 316
+GE
Sbjct: 354 FKGE 357
>pir||F69895 phosphoglycerate dehydrogenase homolog yoaD - Bacillus subtilis
>gi|2619022|gb|AAB84446.1| (AF027868) YoaD [Bacillus
subtilis] >gi|2634250|emb|CAB13749.1| (Z99114) similar
to phosphoglycerate dehydrogenase [Bacillus subtilis]
Length = 344
Score = 150 bits (374), Expect = 3e-35
Identities = 111/335 (33%), Positives = 171/335 (50%), Gaps = 19/335 (5%)
Query: 6 VFITREIPEVGIEMLEKEF---EVEVWEDEREIPRE---ILLEKVKDVDALVTMLSERID 59
V +T E G + LE F + W+++ RE I L K + L+T L + D
Sbjct: 14 VLVTAPYNEEGRKELENLFGSVAYQSWKEQGRAYREDELIQLLKATNATGLITELDQVTD 73
Query: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
VF P L V N+DV A+KRGI V TPG A A++ +++ RH
Sbjct: 74 -SVFASVPELSFVGVCRGMPSNVDVAAASKRGIPVFYTPGRNAQAVAEMFIGNVISFLRH 132
Query: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILY 179
+++ + GEW + + K F G ++ GKT+G+IGFG +GQ IAK FD +I Y
Sbjct: 133 TSASNQWLKDGEWDSDYLQAYVK-FKGNELTGKTVGMIGFGAVGQRIAKLLTAFDCKIKY 191
Query: 180 YSRTRKPEVEKELNA-EFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILI 238
Y P ++ + E L + +SD V + +P +ET +I+ + +MK +AI +
Sbjct: 192 YD----PYIQDDHPLYEKASLKTVFSDSDIVSVHLPRTEETLGLIDRQYFDLMKESAIFV 247
Query: 239 NVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNEELFSLDNVVLTPHIGSATFG 296
N +R V++ + L+ LKE I+GA LDV+ EP + EL SL NV+ TPH+ ATF
Sbjct: 248 NTSRAVVVNREDLLFVLKEHKISGAILDVFYHEPPEESDYELISLPNVLATPHLAGATFE 307
Query: 297 AREGMAKLVAENLIAFKRGEVP---PTLVNREVLK 328
+ ++ + L +K GE T+ N++ LK
Sbjct: 308 VEDHHVTILNKALKKWK-GEKTLNIQTMYNKDALK 341
>sp|P30799|DDH_ZYMMO 2-HYDROXYACID DEHYDROGENASE HOMOLOG >gi|538722|pir||D40649
D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) - Zymomonas
mobilis >gi|155574|gb|AAA71934.1| (L09650) Shows
homology to D-isomer specific
2-hydroxyaciddehydrogenases, including Lactobacillus
plantarum lactatedehydrogenase [Zymomonas mobilis]
Length = 331
Score = 149 bits (373), Expect = 4e-35
Identities = 99/299 (33%), Positives = 148/299 (49%), Gaps = 25/299 (8%)
Query: 42 EKVKDVDALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
EK KD +A+ +++ + EV E L ++VA GY+N+D++ A K I V P
Sbjct: 40 EKAKDAEAVCIFVNDEANAEVLEILAGLGIKLVALRCAGYNNVDLDAAKKLNIKVVRVPA 99
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
+ A+ A +LL R + +G K R + G+ +G DV+ KT+GIIG
Sbjct: 100 YSPYSVAEYAVGMLLTLNRQISRGLKRVRENNFSLEGL-------IGLDVHDKTVGIIGV 152
Query: 160 GRIGQAIAK-RARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKE 218
G IG A GF ++ Y PE+ +++ F LDE++ SD + L PL E
Sbjct: 153 GHIGSVFAHIMTHGFGANVIAYKPHPDPELAEKVGFRFTSLDEVIETSDIISLHCPLTPE 212
Query: 219 TYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEE-PYY--- 274
+HMIN E L K+ L+N +RG ++DTKA+IK+LK + G DVYEEE P +
Sbjct: 213 NHHMINGETLARAKKGFYLVNTSRGGLVDTKAVIKSLKAKHLGGYAADVYEEEGPLFFEN 272
Query: 275 ----------NEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG-EVPPTLV 322
E L + NVV T H T A +A + +++ + G E+P LV
Sbjct: 273 HADDIIEDDILERLIAFPNVVFTGHQAFLTKEALSNIAHSILQDISDAEAGKEMPDALV 331
>sp|P44501|DDH_HAEIN 2-HYDROXYACID DEHYDROGENASE HOMOLOG >gi|1073777|pir||F64047
D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) -
Haemophilus influenzae (strain Rd KW20)
>gi|1573036|gb|AAC21763.1| (U32694) D-lactate
dehydrogenase, fermentative (ldhA) [Haemophilus
influenzae Rd]
Length = 331
Score = 148 bits (370), Expect = 8e-35
Identities = 97/336 (28%), Positives = 168/336 (49%), Gaps = 25/336 (7%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREV 62
K ++ T+ IE++ ++ ++ E + E + + + + +++ R+V
Sbjct: 2 KIAIYSTKSYDRKYIELINAKYNFDL-EFFDFMLNESTVRLAEHCEVVCIFVNDNGSRKV 60
Query: 63 FERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHL 120
E+ L +IVA G++N+D++ A + GI V P +A A+ L++ R +
Sbjct: 61 LEKLAALGVKIVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRI 120
Query: 121 VKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYY 180
+ + TR + G+ +G+++YG+T+G+IG G+IG A+ + +GF M IL Y
Sbjct: 121 HRAYQRTREANFSLEGL-------IGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAY 173
Query: 181 SRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINV 240
+ P VE EL ++ LDEL +S + L P E YH++N E MK +++N
Sbjct: 174 DPFKNPVVE-ELGGQYVELDELYAKSHVITLHCPATPENYHLLNCEAFAKMKDGVMIVNT 232
Query: 241 ARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNEE------------LFSLDNVVL 286
+RG +IDT+A I ALK+ I G+DVYE E ++ ++ L S NV+L
Sbjct: 233 SRGSLIDTQAAIDALKQRKIGALGMDVYENERDLFFEDKSNEVIQDDIFRRLSSCHNVLL 292
Query: 287 TPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLV 322
T H T A +A + N+ K G+V +V
Sbjct: 293 TGHQAFLTEEALTNIADVTLSNIYKLKSGKVCENIV 328
>pir||D83529 D-lactate dehydrogenase (fermentative) PA0927 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946831|gb|AAG04316.1|AE004527_3 (AE004527)
D-lactate dehydrogenase (fermentative) [Pseudomonas
aeruginosa]
Length = 329
Score = 148 bits (370), Expect = 8e-35
Identities = 96/284 (33%), Positives = 146/284 (50%), Gaps = 24/284 (8%)
Query: 48 DALVTMLSERIDREVFER--APRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDAT 105
+ + +++ + R V ER A R+VA + GY+++D+ A G+ V + P A
Sbjct: 46 EVVCAFVNDDLSRPVLERLAAGGTRLVALRSAGYNHVDLAAAEALGLPVVHVPAYSPHAV 105
Query: 106 ADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQA 165
A+ A L+L R L + TR G++ G+ G+D++GK +G+IG G+IG+
Sbjct: 106 AEHAVGLILTLNRRLHRAYNRTREGDFSLHGLT-------GFDLHGKRVGVIGTGQIGET 158
Query: 166 IAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINE 225
A+ GF +L Y P ++ L + LD LL ESD V L PL +T H+I+
Sbjct: 159 FARIMAGFGCELLAYDPYPNPRIQA-LGGRYLALDALLAESDIVSLHCPLTADTRHLIDA 217
Query: 226 ERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEE-----------PYY 274
+RL MK A+LIN RG +++ ALI+ALK G + GLDVYEEE P
Sbjct: 218 QRLATMKPGAMLINTGRGALVNAAALIEALKSGQLGYLGLDVYEEEADIFFEDRSDQPLQ 277
Query: 275 NE---ELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315
++ L S NVV+T H T A +A +N+ A++ G
Sbjct: 278 DDVLARLLSFPNVVVTAHQAFLTREALAAIADTTLDNIAAWQDG 321
>gi|4557497 C-terminal binding protein 1 [Homo sapiens]
>gi|11436083|ref|XP_003445.1| C-terminal binding protein
1 [Homo sapiens] >gi|6014741|sp|Q13363|CTB1_HUMAN
C-TERMINAL BINDING PROTEIN 1 (CTBP1)
>gi|3702075|gb|AAC62822.1| (U37408) phosphoprotein CtBP
[Homo sapiens] >gi|4262370|gb|AAD14597.1| (AF091555)
C-terminal binding protein [Homo sapiens]
Length = 440
Score = 148 bits (369), Expect = 1e-34
Identities = 94/269 (34%), Positives = 136/269 (49%), Gaps = 3/269 (1%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 81 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLY 140
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+GIIG GR+GQA+A RA+ F +
Sbjct: 141 RRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNV 200
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
L+Y VE+ L + L +LL SD V L LN+ +H+IN+ +K M++ A
Sbjct: 201 LFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 260
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 261 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYS 320
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVN 323
A M + A + G +P +L N
Sbjct: 321 EQASIEMREEAAREIRRAITGRIPDSLKN 349
>gi|4557499 C-terminal binding protein 2 [Homo sapiens]
>gi|11432544|ref|XP_005960.1| similar to C-terminal
binding protein 2 (H. sapiens) [Homo sapiens]
>gi|3182976|sp|P56545|CTB2_HUMAN C-TERMINAL BINDING
PROTEIN 2 >gi|2909777|gb|AAC39603.1| (AF016507)
C-terminal binding protein 2 [Homo sapiens]
Length = 445
Score = 147 bits (368), Expect = 1e-34
Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LR++ GYDN+D++ A + GI V N P + TAD +L
Sbjct: 87 LTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLY 146
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+G+IGFGR GQA+A RA+ F +
Sbjct: 147 RRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSV 206
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
++Y + +E+ L + L +LL +SD V L LN+ +H+IN+ +K M++ A
Sbjct: 207 IFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAF 266
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 267 LVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYS 326
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTL---VNREVLKVRKP 332
A M + A + G +P +L VN+E P
Sbjct: 327 EQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAP 367
>sp|O88712|CTB1_MOUSE C-TERMINAL BINDING PROTEIN 1 >gi|3452507|emb|CAA09219.1| (AJ010483)
CtBP1 protein [Mus musculus]
Length = 440
Score = 147 bits (368), Expect = 1e-34
Identities = 93/269 (34%), Positives = 136/269 (49%), Gaps = 3/269 (1%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 81 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLY 140
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+GIIG GR+GQA+A RA+ F +
Sbjct: 141 RRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNV 200
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
L+Y +E+ L + L +LL SD V L LN+ +H+IN+ +K M++ A
Sbjct: 201 LFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 260
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 261 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYS 320
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVN 323
A M + A + G +P +L N
Sbjct: 321 EQASIEMREEAAREIRRAITGRIPDSLKN 349
>gi|7304989 C-terminal binding protein 1 [Mus musculus]
>gi|6015474|dbj|BAA85180.1| (AB033122) C-terminal
binding protein 1 [Mus musculus]
Length = 441
Score = 147 bits (368), Expect = 1e-34
Identities = 93/269 (34%), Positives = 136/269 (49%), Gaps = 3/269 (1%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 81 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLY 140
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+GIIG GR+GQA+A RA+ F +
Sbjct: 141 RRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNV 200
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
L+Y +E+ L + L +LL SD V L LN+ +H+IN+ +K M++ A
Sbjct: 201 LFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 260
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 261 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYS 320
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVN 323
A M + A + G +P +L N
Sbjct: 321 EQASIEMREEAAREIRRAITGRIPDSLKN 349
>gi|6753548 C-terminal binding protein 2 [Mus musculus]
>gi|3513571|gb|AAC33873.1| (AF059735) C-terminal binding
protein 2 CtBP2 [Mus musculus]
>gi|6015476|dbj|BAA85181.1| (AB033123) C-terminal
binding protein 2 [Mus musculus]
Length = 445
Score = 147 bits (367), Expect = 2e-34
Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LR++ GYDN+D++ A + GI V N P + TAD +L
Sbjct: 87 LTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHILNLY 146
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+G+IGFGR GQA+A RA+ F +
Sbjct: 147 RRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSV 206
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
++Y + +E+ L + L +LL +SD V L LN+ +H+IN+ +K M++ A
Sbjct: 207 IFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAF 266
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 267 LVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYS 326
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTL---VNREVLKVRKP 332
A M + A + G +P +L VN+E P
Sbjct: 327 EQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAP 367
>pir||C82072 D-3-phosphoglycerate dehydrogenase VC2481 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657060|gb|AAF95623.1| (AE004317)
D-3-phosphoglycerate dehydrogenase [Vibrio cholerae]
Length = 409
Score = 147 bits (367), Expect = 2e-34
Identities = 94/282 (33%), Positives = 139/282 (48%), Gaps = 22/282 (7%)
Query: 40 LLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
L++ +KDV + + +V A +L + + +G + +D+ A KRGI V N P
Sbjct: 47 LIKAIKDVHFVGIRSRSNLTEKVINAAEKLVAIGCFCIGTNQVDLNAAAKRGIPVFNAPF 106
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
T + A+L +L R + + + G WKK Y+ GK +GIIG+
Sbjct: 107 SNTRSVAELVLGEILLLLRGIPEKNALAHRGIWKKSADN-------SYEARGKRLGIIGY 159
Query: 160 GRIGQAIAKRARGFDMRILYYSRTRKPEVEKELN----AEFKPLDELLRESDFVVLAVPL 215
G IG + A M + +Y ++E +L+ + L ELL + D + L VP
Sbjct: 160 GHIGTQLGIIAENLGMHVYFY------DIESKLSLGNATQVHTLSELLNKCDVISLHVPE 213
Query: 216 NKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYN 275
T +M+ E MK AI IN ARG V+D AL AL+ G IAGA +DV+ EEP N
Sbjct: 214 TAGTKNMMGAEEFARMKPGAIFINAARGTVVDIPALCNALESGHIAGAAIDVFPEEPASN 273
Query: 276 EE-----LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
+E L DNV+LTPH+G +T A+E + VA L +
Sbjct: 274 KEPFESPLMKFDNVILTPHVGGSTQEAQENIGIEVAGKLAKY 315
>gi|9506527 C-terminal binding protein 1 [Rattus norvegicus]
>gi|3925357|gb|AAC79427.1| (AF067795) BFA-dependent
ADP-ribosylation substrate BARS50 [Rattus norvegicus]
Length = 430
Score = 146 bits (366), Expect = 2e-34
Identities = 93/269 (34%), Positives = 136/269 (49%), Gaps = 3/269 (1%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 70 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLY 129
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+GIIG GR+GQA+A RA+ F +
Sbjct: 130 RRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNV 189
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
L+Y +E+ L + L +LL SD V L LN+ +H+IN+ +K M++ A
Sbjct: 190 LFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 249
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 250 LVNTARGGLMDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYS 309
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVN 323
A M + A + G +P +L N
Sbjct: 310 EQASIEMREEAAREIRRAITGRIPDSLKN 338
>gi|9631622 contains D-isomer specific 2-hydroxyacid dehydrogenase signature;
similar to E. coli D-lactate dehydrogenase, corresponds
to Swiss-Prot Accession Number P52643 [Paramecium
bursaria Chlorella virus 1] >gi|7461865|pir||T17543
probable D-lactate dehydrogenase (EC 1.1.1.28) -
Chlorella virus PBCV-1 >gi|624075|gb|AAC96421.1|
(U42580) contains D-isomer specific 2-hydroxyacid
dehydrogenase signature; similar to E. coli D-lactate
dehydrogenase, corresponds to Swiss-Prot Accession
Number P52643 [Paramecium bursaria Chlorella virus 1]
Length = 363
Score = 145 bits (363), Expect = 6e-34
Identities = 93/279 (33%), Positives = 147/279 (52%), Gaps = 36/279 (12%)
Query: 66 APRLRIVANYAV--------GYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
AP L I+ N V G+D +D+E A + G V P + A+LA ++A +
Sbjct: 85 APVLDILKNCGVSSITLRCAGFDRLDIEYAKELGFNVYRVPAYSPRSVAELALTHMMALS 144
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R++ ++G + G+ +G ++ KTIGIIG G+I Q K + RI
Sbjct: 145 RNIQLVLPRVKTGNYTMEGL-------VGREITDKTIGIIGTGKIAQEFIKLVKPMAGRI 197
Query: 178 LYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
+ Y + ++ KE+ E+ L ++++ESD + L PL K T+HMINE+ LK MK+TA++
Sbjct: 198 IAYD-VYENDIVKEMGVEYMSLPDVIKESDVLSLHCPLMKSTFHMINEDTLKTMKKTAVI 256
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNE------------------E 277
IN ARG +IDT+ALI AL+ G I+G +DVYE E ++ +
Sbjct: 257 INTARGGLIDTEALIDALESGVISGCAMDVYEHESGLFFTDRAVLPIEDRMKFWDKKFAR 316
Query: 278 LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGE 316
L +L N +++PH+ T A + +A ENL + +GE
Sbjct: 317 LANLPNAIVSPHVAFLTKEALKNIADTTIENLTSAFKGE 355
>dbj|BAA36181.1| (D88272) formate dehydrogenase [Hordeum vulgare]
Length = 377
Score = 145 bits (363), Expect = 6e-34
Identities = 94/307 (30%), Positives = 160/307 (51%), Gaps = 10/307 (3%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANY 75
+ LE + + D++E L + ++D+ L+T + E ++A ++
Sbjct: 60 DWLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTAEKIKKAKTPELLLTA 119
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
+G D+ID+ A G+ V G T + A+ +L R+ + G + GEW
Sbjct: 120 GIGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVA 179
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR-KPEVEKELNA 194
G+A YD+ GKT+G +G GR G+ + +R + F+ +LY+ R + PE+EKE+ A
Sbjct: 180 GIAHR-----AYDLEGKTVGTVGAGRYGRLLLQRLKPFNCNLLYHDRLQINPELEKEIGA 234
Query: 195 EFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
+F+ LD +L + D VV+ PL ++T M N+E++ MK+ I++N ARG ++DT+A+
Sbjct: 235 KFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVAD 294
Query: 254 ALKEGWIAGAGLDVYEEEPYYNEELFS-LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
A G IAG G DV+ +P + + + N +TPHI T A+ A V + L +
Sbjct: 295 ACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRY 354
Query: 313 KRGEVPP 319
+GE P
Sbjct: 355 FKGEEFP 361
>gb|AAD14596.1| (AF091554) C-terminal binding protein [Xenopus laevis]
Length = 440
Score = 145 bits (362), Expect = 7e-34
Identities = 92/269 (34%), Positives = 135/269 (49%), Gaps = 3/269 (1%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 81 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTMCHILNLY 140
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+GIIG GR+GQA+A RA+ F +
Sbjct: 141 RRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKTFGFNV 200
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
+Y +E+ L + L +LL SD V L LN+ +H+IN+ +K M++ A
Sbjct: 201 FFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTIKQMRQGAF 260
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L N++ TPH +
Sbjct: 261 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHAAWYS 320
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTLVN 323
A M + A + G +P +L N
Sbjct: 321 EQASIEMREEAAREIRRAITGRIPDSLKN 349
>sp|P56546|CTB2_MOUSE C-TERMINAL BINDING PROTEIN 2 >gi|2909779|gb|AAC40043.1| (AF016508)
C-terminal binding protein 2 [Mus musculus]
Length = 420
Score = 145 bits (361), Expect = 1e-33
Identities = 93/281 (33%), Positives = 142/281 (50%), Gaps = 6/281 (2%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LR++ GYDN+D++ A + GI V N P + TAD +L
Sbjct: 62 LTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHILNLY 121
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R + R G + + G+T+G+IGFGR GQA+A RA+ F +
Sbjct: 122 RRNTWLYQALREGTRVQSVEQIRDVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSV 181
Query: 178 LYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
++Y + +E+ L + L +LL +SD V L LN+ +H+IN+ +K M++ A
Sbjct: 182 IFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAF 241
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--LFSLDNVVLTPHIGSAT 294
L+N ARG ++D KAL +ALKE I GA LDV+E EP+ + L N++ TPH +
Sbjct: 242 LVNAARGGLVDEKALAQALKEARIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYS 301
Query: 295 FGAREGMAKLVAENLIAFKRGEVPPTL---VNREVLKVRKP 332
A M + A + G +P +L VN+E P
Sbjct: 302 EQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAP 342
>pir||S75499 D-isomer specific 2-hydroxyacid dehydrogenase family -
Synechocystis sp. (strain PCC 6803)
>gi|1653144|dbj|BAA18060.1| (D90911) D-isomer specific
2-hydroxyacid dehydrogenase family [Synechocystis sp.]
Length = 318
Score = 144 bits (359), Expect = 2e-33
Identities = 94/274 (34%), Positives = 144/274 (52%), Gaps = 12/274 (4%)
Query: 40 LLEKVKDVDALVTMLSERIDREV-FERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTP 98
L E++ D D ++ R + + +L+ +A + +G D ID+ A + GI +NTP
Sbjct: 44 LCEQIADFDGVIAGDDPFTARVLTIGKQGKLKALAKWGIGVDAIDLAAAKQLGILTSNTP 103
Query: 99 GVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIG 158
V D AD+A L+ AR L D+ R GEW K G+ + GKT GIIG
Sbjct: 104 NVFGDEVADVAIGYLILLARELHCIDQAVRQGEWLK---------IRGHSLRGKTAGIIG 154
Query: 159 FGRIGQAIAKRARGFDMRILYYS-RTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNK 217
G IGQAIA R + +++L Y + ++ PL ++L+++D + LA L
Sbjct: 155 VGSIGQAIAVRLQSMGLKLLGYDPHPISADFCEQTGLHPVPLQDVLQQADCLFLACNLTP 214
Query: 218 ETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNE 276
+ +H++N + MK LINVARG ++D ALI+ L+ G +A A LDV+E+EP +
Sbjct: 215 DNFHLLNADTFDQMKPGVWLINVARGGLVDQAALIETLQTGKVAKAALDVFEQEPLAADS 274
Query: 277 ELFSLDNVVLTPHIGSATFGAREGMAKLVAENLI 310
L L V+L H GS T A + +L +NL+
Sbjct: 275 PLTQLPQVILGSHNGSNTREAVLKVNQLAIDNLV 308
>pir||T51423 formate dehydrogenase (FDH) - Arabidopsis thaliana
>gi|6625953|gb|AAF19435.1|AF208028_1 (AF208028)
NAD-dependent formate dehydrogenase 1A [Arabidopsis
thaliana] >gi|6625955|gb|AAF19436.1|AF208029_1
(AF208029) NAD-dependent formate dehydrogenase 1B
[Arabidopsis thaliana] >gi|6681408|dbj|BAA88683.1|
(AB023897) formate dehydrogenase [Arabidopsis thaliana]
>gi|7677266|gb|AAF67100.1|AF217195_1 (AF217195) formate
dehydrogenase [Arabidopsis thaliana]
>gi|9755746|emb|CAC01877.1| (AL391149) formate
dehydrogenase (FDH) [Arabidopsis thaliana]
Length = 384
Score = 143 bits (356), Expect = 4e-33
Identities = 89/308 (28%), Positives = 162/308 (51%), Gaps = 10/308 (3%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANY 75
+ LE + + D++E P L + + D+ L++ + E ++A L+++
Sbjct: 67 DWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTA 126
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
+G D+ID++ A G+ V G + A+ +L R+ V G GEW
Sbjct: 127 GIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA 186
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRK-PEVEKELNA 194
G+A+ YD+ GKTIG +G GRIG+ + +R + F +LY+ R + PE+EKE A
Sbjct: 187 GIAYR-----AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGA 241
Query: 195 EF-KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
+F + L+E+L + D +V+ +PL ++T M N+E + +K+ +++N ARG +++ +A++
Sbjct: 242 KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVD 301
Query: 254 ALKEGWIAGAGLDVYEEEPYYNEELFS-LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
A++ G I G DV++ +P + + + N +TPH T A+ A + L +
Sbjct: 302 AVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERY 361
Query: 313 KRGEVPPT 320
+GE PT
Sbjct: 362 FKGEDFPT 369
>pir||F82068 2-hydroxyacid dehydrogenase family protein VC2504 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657086|gb|AAF95646.1| (AE004320) 2-hydroxyacid
dehydrogenase family protein [Vibrio cholerae]
Length = 325
Score = 143 bits (356), Expect = 4e-33
Identities = 98/321 (30%), Positives = 164/321 (50%), Gaps = 11/321 (3%)
Query: 6 VFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFER 65
VF+ R I + FE E + P++++ E++ D ++T + RE+ +
Sbjct: 12 VFLDRATIPRHISLPALPFEHHWLEYDACEPQQVV-ERLLAADIVITN-KVVLTREMLIQ 69
Query: 66 APRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDK 125
P+L+++A A G +N+D+ I V N G T + + A++ A R+L+
Sbjct: 70 LPKLKLIAISATGTNNVDLPACRDLNIAVCNVQGYATRSVPEHVVAMMFALRRNLIGYHN 129
Query: 126 FTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRK 185
+GEW++ +G D+ G T+GIIG G +GQA A AR M +L R
Sbjct: 130 DIAAGEWQRHKQFCFFTHPIG-DIAGSTMGIIGSGALGQATANLARALGMHVLLAER--- 185
Query: 186 PEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKV 245
+ + E + +++L +SD + L PL ET ++I+E L M A+LIN RG +
Sbjct: 186 -KGQVECRDGYTSFEQVLAQSDVLSLHCPLTDETRNIISEAELAQMNPNALLINTGRGGL 244
Query: 246 IDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF----SLDNVVLTPHIGSATFGAREGM 301
+D +AL+ ALK IAGAG+DV+ EP + L N++LTPH+ + + + +
Sbjct: 245 VDEQALVDALKRRQIAGAGVDVFSAEPADMDNPLIANRDLPNLLLTPHVAWGSDSSIQQL 304
Query: 302 AKLVAENLIAFKRGEVPPTLV 322
A ++ +N+ AF RGE +V
Sbjct: 305 ATILIDNISAFMRGEAKNRVV 325
>pir||C83607 D-3-phosphoglycerate dehydrogenase PA0316 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946162|gb|AAG03705.1|AE004469_10 (AE004469)
D-3-phosphoglycerate dehydrogenase [Pseudomonas
aeruginosa]
Length = 409
Score = 143 bits (356), Expect = 4e-33
Identities = 95/300 (31%), Positives = 148/300 (48%), Gaps = 15/300 (5%)
Query: 40 LLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
L E++ D + ++ EVF+ A +L V + +G + +D+ A +RGI V N P
Sbjct: 47 LKERIADAHFIGIRSRTQLTEEVFDCAKKLIAVGCFCIGTNQVDLNAARERGIAVFNAPY 106
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
T + A+L A + R + + + G W K +++ GK +GI+G+
Sbjct: 107 SNTRSVAELVLAEAILLLRGIPEKNASCHRGGWIKSAAN-------SFEIRGKKLGIVGY 159
Query: 160 GRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKET 219
G IG ++ A M++ +Y K + + + L ELL SD V L VP T
Sbjct: 160 GSIGTQLSVLAEALGMQVFFYDTVTKLPLGNAV--QIGSLHELLGMSDIVSLHVPELPST 217
Query: 220 YHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF 279
MI E+ ++ MK+ ILIN ARG V++ L A+K+ + GA +DV+ EP N+E F
Sbjct: 218 QWMIGEKEIRAMKKGGILINAARGTVVELDHLAAAIKDEHLIGAAIDVFPVEPKSNDEEF 277
Query: 280 S-----LDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN-REVLKVRKPG 333
+ LD V+LTPHIG +T A+ + VAE L+ + + VN EV PG
Sbjct: 278 ASPLRGLDRVILTPHIGGSTAEAQANIGLEVAEKLVKYSDNGTSVSSVNFPEVALPSHPG 337
>pir||T35499 probable D-lactate dehydrogenase - Streptomyces coelicolor
>gi|5689928|emb|CAB51966.1| (AL109661) putative
D-lactate dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 331
Score = 141 bits (351), Expect = 1e-32
Identities = 88/260 (33%), Positives = 139/260 (52%), Gaps = 22/260 (8%)
Query: 70 RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRS 129
R+VA + G++N+D++ A + G+ V + A+ A+AL +A R +V+ TR
Sbjct: 69 RMVAQRSTGFNNVDLDTADRLGMTVARVSYYSPHSVAEFAWALAMAVNRRIVRASIRTRD 128
Query: 130 GEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVE 189
+++ G+ +G D++G+T G++G G+IG+A A+ A GF MR+L + P
Sbjct: 129 FDFRLDGL-------MGRDLHGRTAGVLGTGKIGEAFARIAHGFGMRLLGWDVAENPACA 181
Query: 190 KELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTK 249
EL + DELL SD + L VPL ET H+I+ LK M+ AILIN +RG +IDT
Sbjct: 182 -ELGMRYVAKDELLARSDLITLHVPLMAETRHLIDATALKAMRDDAILINSSRGGLIDTA 240
Query: 250 ALIKALKEGWIAGAGLDVYEEEP--YYNEE------------LFSLDNVVLTPHIGSATF 295
AL+ L+ G AG GLDVYE E ++ ++ L + NV++T H T
Sbjct: 241 ALVGELRAGRFAGVGLDVYEAEAGLFFLDKSLEAVEDDTLARLVTFPNVLVTSHQAYYTE 300
Query: 296 GAREGMAKLVAENLIAFKRG 315
A + N++ ++ G
Sbjct: 301 DAVGQIVGTTVRNVLDYREG 320
>dbj|BAA25287.1| (AB011840) CtBP [Drosophila melanogaster]
Length = 383
Score = 140 bits (350), Expect = 2e-32
Identities = 92/276 (33%), Positives = 137/276 (49%), Gaps = 20/276 (7%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ +E E+ LRI+ G DNIDV+ A + GI V N PG + AD L+L
Sbjct: 81 LTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLY 140
Query: 118 RHLV-------KGDKFTRSGEWKK--RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK 168
R +G KFT + ++ G A + G T+G++G GRIG A+A
Sbjct: 141 RRTYWLANMVREGKKFTGPEQVREAAHGCA---------RIRGDTLGLVGLGRIGSAVAL 191
Query: 169 RARGFDMRILYYSRTRKPEVEKELN-AEFKPLDELLRESDFVVLAVPLNKETYHMINEER 227
RA+ F +++Y ++K L L +LL +SD V L LN+ +H+INE
Sbjct: 192 RAKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFT 251
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLT 287
+K M+ A L+N ARG ++D + L ALK+G I A LDV+E EP YN L N++ T
Sbjct: 252 IKQMRPGAFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEP-YNGALKDAPNLICT 310
Query: 288 PHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
PH + + + ++ A + G +P L N
Sbjct: 311 PHAAFFSDASATELREMAATEIRRAIVGNIPDVLRN 346
>sp|P08328|SERA_ECOLI D-3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH) >gi|65956|pir||DEECPG
phosphoglycerate dehydrogenase (EC 1.1.1.95) -
Escherichia coli >gi|459755|gb|AAA24625.1| (L29397)
phosphoglycerate dehydrogenase [Escherichia coli]
>gi|882442|gb|AAA69080.1| (U28377) D-3-phosphoglycerate
dehydrogenase [Escherichia coli]
>gi|1789279|gb|AAC75950.1| (AE000374)
D-3-phosphoglycerate dehydrogenase [Escherichia coli
K12]
Length = 410
Score = 139 bits (348), Expect = 3e-32
Identities = 89/280 (31%), Positives = 136/280 (47%), Gaps = 14/280 (5%)
Query: 38 EILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNT 97
E L E ++D + + +V A +L + + +G + +D++ A KRGI V N
Sbjct: 45 EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNA 104
Query: 98 PGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGII 157
P T + A+L LL R + + + G W K ++ GK +GII
Sbjct: 105 PFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAG-------SFEARGKKLGII 157
Query: 158 GFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNK 217
G+G IG + A M + +Y K + + L +LL SD V L VP N
Sbjct: 158 GYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQH--LSDLLNMSDVVSLHVPENP 215
Query: 218 ETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE 277
T +M+ + + +MK ++LIN +RG V+D AL AL +AGA +DV+ EP N +
Sbjct: 216 STKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSD 275
Query: 278 LFS-----LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
F+ DNV+LTPHIG +T A+E + VA LI +
Sbjct: 276 PFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKY 315
>pdb|1PSD|A Chain A, D-3-Phosphoglycerate Dehydrogenase (Phosphoglycerate
Dehydrogenase) (E.C.1.1.1.95) >gi|1127237|pdb|1PSD|B
Chain B, D-3-Phosphoglycerate Dehydrogenase
(Phosphoglycerate Dehydrogenase) (E.C.1.1.1.95)
Length = 409
Score = 139 bits (348), Expect = 3e-32
Identities = 89/280 (31%), Positives = 136/280 (47%), Gaps = 14/280 (5%)
Query: 38 EILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNT 97
E L E ++D + + +V A +L + + +G + +D++ A KRGI V N
Sbjct: 44 EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNA 103
Query: 98 PGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGII 157
P T + A+L LL R + + + G W K ++ GK +GII
Sbjct: 104 PFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAG-------SFEARGKKLGII 156
Query: 158 GFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNK 217
G+G IG + A M + +Y K + + L +LL SD V L VP N
Sbjct: 157 GYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQH--LSDLLNMSDVVSLHVPENP 214
Query: 218 ETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE 277
T +M+ + + +MK ++LIN +RG V+D AL AL +AGA +DV+ EP N +
Sbjct: 215 STKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSD 274
Query: 278 LFS-----LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
F+ DNV+LTPHIG +T A+E + VA LI +
Sbjct: 275 PFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKY 314
>pir||C81380 probable D-2-hydroxyacid dehydrogenase Cj0373 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967847|emb|CAB74209.1| (AL139075) putative
D-2-hydroxyacid dehydrogenase [Campylobacter jejuni]
Length = 311
Score = 139 bits (348), Expect = 3e-32
Identities = 92/279 (32%), Positives = 151/279 (53%), Gaps = 14/279 (5%)
Query: 37 REILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTN 96
+E +E++KD + +T ID++V + L+++ A G +NID+E A ++GI V N
Sbjct: 33 KEQTIERLKDANVAMTN-KVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKN 91
Query: 97 TPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 156
G T + FA + A ++ DK+++ G+W + + L + GK GI
Sbjct: 92 AAGYSTMSVVQHTFAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILN-TLSGKKHGI 150
Query: 157 IGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLD--ELLRESDFVVLAVP 214
IG G IG+ +AK ++ F I YYS + + NA+F L+ +LL+ D + + P
Sbjct: 151 IGLGTIGKEVAKISKAFGAEIYYYSTSGANK-----NADFVHLELKDLLKTCDIISIHAP 205
Query: 215 LNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY 274
LN++T +++ E LK++K AILINV RG +++ L K + E I GLDV E EP
Sbjct: 206 LNEKTKNLLAFEELKLLKDNAILINVGRGGIVNENDLAKIIDEKNIR-VGLDVLEIEPMM 264
Query: 275 -NEELFSL---DNVVLTPHIGSATFGAREGMAKLVAENL 309
N L S+ +N+++TPH+ A+ A + +V NL
Sbjct: 265 KNHPLLSIKNKENLIITPHVAWASKEALNALMDIVYNNL 303
>emb|CAA12074.1| (AJ224690) C-terminal binding protein [Drosophila melanogaster]
Length = 386
Score = 139 bits (346), Expect = 5e-32
Identities = 91/278 (32%), Positives = 137/278 (48%), Gaps = 21/278 (7%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ +E E+ LRI+ G DNIDV+ A + GI V N PG + AD L+L
Sbjct: 81 LTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLY 140
Query: 118 RHLV-------KGDKFTRSGEWKK--RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK 168
R +G KFT + ++ G A + G T+G++G GRIG A+A
Sbjct: 141 RRTYWLANMVREGKKFTGPEQVREAAHGCA---------RIRGDTLGLVGLGRIGSAVAL 191
Query: 169 RARGFDMRILYYSRTRKPEVEKELN-AEFKPLDELLRESDFVVLAVPLNKETYHMINEER 227
RA+ F +++Y ++K L L +LL +SD V L LN+ +H+INE
Sbjct: 192 RAKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFT 251
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY--YNEELFSLDNVV 285
+K M+ A L+N ARG ++D + L ALK+G I A LDV+E EPY + L N++
Sbjct: 252 IKQMRPGAFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEPYNVFQGALKDAPNLI 311
Query: 286 LTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
TPH + + + ++ A + G +P L N
Sbjct: 312 CTPHAAFFSDASATELREMAATEIRRAIVGNIPDVLRN 349
>gb|AAF54891.1| (AE003698) CtBP gene product [alt 2] [Drosophila melanogaster]
>gi|7299710|gb|AAF54892.1| (AE003698) CtBP gene product
[alt 1] [Drosophila melanogaster]
Length = 386
Score = 139 bits (346), Expect = 5e-32
Identities = 91/278 (32%), Positives = 137/278 (48%), Gaps = 21/278 (7%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ +E E+ LRI+ G DNIDV+ A + GI V N PG + AD L+L
Sbjct: 81 LTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLY 140
Query: 118 RHLV-------KGDKFTRSGEWKK--RGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK 168
R +G KFT + ++ G A + G T+G++G GRIG A+A
Sbjct: 141 RRTYWLANMVREGKKFTGPEQVREAAHGCA---------RIRGDTLGLVGLGRIGSAVAL 191
Query: 169 RARGFDMRILYYSRTRKPEVEKELN-AEFKPLDELLRESDFVVLAVPLNKETYHMINEER 227
RA+ F +++Y ++K L L +LL +SD V L LN+ +H+INE
Sbjct: 192 RAKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFT 251
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY--YNEELFSLDNVV 285
+K M+ A L+N ARG ++D + L ALK+G I A LDV+E EPY + L N++
Sbjct: 252 IKQMRPGAFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEPYNVFQGALKDAPNLI 311
Query: 286 LTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
TPH + + + ++ A + G +P L N
Sbjct: 312 CTPHAAFFSDASATELREMAATEIRRAIVGNIPDVLRN 349
>sp|Q07511|FDH_SOLTU MITOCHONDRIAL FORMATE DEHYDROGENASE PRECURSOR (NAD-DEPENDENT
FORMATE DEHYDROGENASE) (FDH) >gi|542089|pir||JQ2272
formate dehydrogenase (EC 1.2.1.2) precursor,
mitochondrial - potato >gi|297798|emb|CAA79702.1|
(Z21493) mitochondrial formate dehydrogenase precursor
[Solanum tuberosum]
Length = 379
Score = 138 bits (345), Expect = 7e-32
Identities = 86/304 (28%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANY 75
E LE + + ++E P L + + D+ L++ + E ++A L+++
Sbjct: 62 EWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTA 121
Query: 76 AVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKR 135
+G D++D++ A G+ V G T + A+ +L R+ + G +GEW
Sbjct: 122 GIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVA 181
Query: 136 GVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKP-EVEKELNA 194
+A YD+ GKT+G +G GRIG+ + +R + F+ +LY+ R + E+E ++ A
Sbjct: 182 AIAHR-----AYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGA 236
Query: 195 EFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
+F+ LD++L + D VV+ PL ++T M ++ER+ +K+ +++N ARG ++DT+A++
Sbjct: 237 KFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVD 296
Query: 254 ALKEGWIAGAGLDVYEEEPYYNEELFS-LDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
A G IAG DV+ +P + + + N +TPHI T A+ A + L +
Sbjct: 297 ACNSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRY 356
Query: 313 KRGE 316
+GE
Sbjct: 357 FKGE 360
>pir||F82022 probable glycerate dehydrogenase (EC 1.1.1.29) NMA0274 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379036|emb|CAB83582.1| (AL162752) putative
glycerate dehydrogenase [Neisseria meningitidis Z2491]
Length = 322
Score = 138 bits (345), Expect = 7e-32
Identities = 87/284 (30%), Positives = 148/284 (51%), Gaps = 9/284 (3%)
Query: 42 EKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVL 101
E+V+D ++T I ++ P+L ++A A G +N+D+ A G+ V N
Sbjct: 45 ERVRDAHIVITN-KVMISADIIAANPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYG 103
Query: 102 TDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGR 161
++ A+ AF L++A R+L + +G W+K H + D+ GKT+ + G G
Sbjct: 104 NESVAEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIR-DLNGKTLAVFGRGN 162
Query: 162 IGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYH 221
IG+ +A+ A+ F MR+++ V + + ++ ++ +D + L PLN +T +
Sbjct: 163 IGRTLARYAQAFGMRVVFAEHKHAHAVREG----YVSFEDAVQTADVLSLHCPLNAQTEN 218
Query: 222 MINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF-- 279
MI E L+ MK A+LIN RG ++D AL+ ALK G I GAG+DV EEP
Sbjct: 219 MIGENELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLN 278
Query: 280 -SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLV 322
L N+++TPH A+ A + + ++ N+ +F +GE +V
Sbjct: 279 ARLPNLIVTPHTAWASREALDRLFDILLANIHSFVKGEAQNRVV 322
>pir||H81245 glycerate dehydrogenase NMB0029 [imported] - Neisseria meningitidis
(group B strain MD58) >gi|7225248|gb|AAF40500.1|
(AE002361) glycerate dehydrogenase [Neisseria
meningitidis MC58]
Length = 317
Score = 138 bits (343), Expect = 1e-31
Identities = 88/284 (30%), Positives = 146/284 (50%), Gaps = 9/284 (3%)
Query: 42 EKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVL 101
E+V+D ++T I ++ P+L ++A A G +N+D+ A G+ V N
Sbjct: 40 ERVRDAHIVITN-KVMISADIIAANPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYG 98
Query: 102 TDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGR 161
++ A+ AF L++A R+L + +G W+K H + D+ GKT+ + G G
Sbjct: 99 NESVAEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIR-DLNGKTLAVFGRGN 157
Query: 162 IGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYH 221
IG+ +A A+ F M +++ V + + ++ +R +D + L PLN +T +
Sbjct: 158 IGRTLAGYAQAFGMGVVFAEHKHASAVREG----YVSFEDAVRAADVLSLHCPLNAQTEN 213
Query: 222 MINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF-- 279
MI E L+ MK A+LIN RG ++D AL+ ALK G I GAG+DV EP N
Sbjct: 214 MIGENELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTNEPPKNGNPLLN 273
Query: 280 -SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLV 322
L N+++TPH A+ A + + ++ N+ AF +GE +V
Sbjct: 274 ARLPNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV 317
>pir||B82587 D-3-phosphoglycerate dehydrogenase XF2206 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107351|gb|AAF85005.1|AE004033_9 (AE004033)
D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa]
Length = 413
Score = 138 bits (343), Expect = 1e-31
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 14/313 (4%)
Query: 5 RVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFE 64
R+ + + GIE ++ +P E L ++ + + +++ EV
Sbjct: 14 RILLLEGVSHSGIETFRAAGYSQIKIHTTSLPEEALQAEIAEAHIIGIRSRTQLNAEVLG 73
Query: 65 RAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGD 124
A RL + + +G + +D++ A GI V N P T + A+L A + R + + +
Sbjct: 74 HAKRLMAIGCFCIGTNQVDLDTAELSGIPVFNAPYSNTRSVAELIIAEAILLLRGIPQKN 133
Query: 125 KFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR 184
G W K + H + GK +GI+G+G IG ++ A M++++Y
Sbjct: 134 AECHRGGWSKSAINSH-------EARGKVLGIVGYGHIGTQVSVLAEAMGMQVIFYDIES 186
Query: 185 KPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGK 244
K + A LDELL +D V L VP T +M+ L MK A LIN +RG
Sbjct: 187 KLSLGNARPAA--SLDELLGIADVVTLHVPETAATKNMLGHAELARMKPGAHLINASRGT 244
Query: 245 VIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF-----SLDNVVLTPHIGSATFGARE 299
V++ AL AL G + GA +DV+ EP N + F DNV+LTPHIG +T A++
Sbjct: 245 VVEIDALDAALVSGHLGGAAVDVFPSEPKGNSDPFISPLSRHDNVILTPHIGGSTLEAQD 304
Query: 300 GMAKLVAENLIAF 312
+ VA LI +
Sbjct: 305 NIGIEVAAKLIRY 317
>dbj|BAB04668.1| (AP001510) D-3-phosphoglycerate dehydrogenase [Bacillus halodurans]
Length = 316
Score = 138 bits (343), Expect = 1e-31
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 15/313 (4%)
Query: 13 PEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIV 72
PE+ E+L+ V ER EI+ +++ D L+T E + E + A +L+ +
Sbjct: 11 PEIQQELLDDYPNVHFHFFER---MEIVGSALEEADVLITY-GEDVTEEHLQAAKKLKWI 66
Query: 73 ANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEW 132
+ G + + + ++GI VTN G+ A+ +++L AR+ + + W
Sbjct: 67 MVISAGVEQLPFQAIKEKGIIVTNAKGIHAIPMAEYTLSMMLQVARNAKRLISLEQEQTW 126
Query: 133 KKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL 192
+R ++ G+T+G++G G IGQ IA+ A+ F M+ + + T + +
Sbjct: 127 DRRVPM--------IELNGQTVGVLGAGAIGQEIARLAKAFRMKTIGMNSTGRTVSSFDQ 178
Query: 193 NAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALI 252
+D LL+ SDFVV +P K T + ER ++MK +A+ IN+ RGK + L+
Sbjct: 179 IVPPASVDTLLKNSDFVVSVLPFTKRTEGFMTYERFQLMKPSAVFINIGRGKTVKQTELL 238
Query: 253 KALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIA 311
KAL+E I+ A LDV+EEEP N +++D+V +TPH+ + + + EN +
Sbjct: 239 KALEEKAISHAVLDVFEEEPLEENHPFWTMDSVTVTPHLSGISRQYQPRAFAIFRENFDS 298
Query: 312 FKRGEVPPTLVNR 324
F G P L+NR
Sbjct: 299 FIAG--TPPLINR 309
>sp|P45250|YF56_HAEIN PUTATIVE 2-HYDROXYACID DEHYDROGENASE HI1556 >gi|1075442|pir||F64129
probable phosphoglycerate dehydrogenase homolog -
Haemophilus influenzae (strain Rd KW20)
>gi|1574400|gb|AAC23205.1| (U32830) 2-hydroxyacid
dehydrogenase [Haemophilus influenzae Rd]
Length = 315
Score = 137 bits (341), Expect = 2e-31
Identities = 88/289 (30%), Positives = 145/289 (49%), Gaps = 11/289 (3%)
Query: 29 WEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEAT 88
W + E +E+VKD D ++T DRE ++ P+L+++A A G +N+D+ A
Sbjct: 26 WTEYEHTSAEQTIERVKDADIVITS-KVIFDRETLQQLPKLKLIAITATGTNNVDLVAAE 84
Query: 89 KRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYD 148
+ GI V N G + + L+ + L + +W + + + + D
Sbjct: 85 EMGIAVRNVTGYSSTTVPEHVIGLIFSLKHSLAGWLRDQTEAKWAESKQFCYFDYPIT-D 143
Query: 149 VYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDF 208
V G T+G+ G G +G + + A M++LY + + V +E + P DE+L+++D
Sbjct: 144 VRGSTLGVFGKGCLGTEVGRLANAVGMKVLY-AEHKDATVCRE---GYTPFDEVLKQADI 199
Query: 209 VVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVY 268
V L PL + T +IN E L MK+ A LIN RG +ID AL+ ALK G + GA LDV
Sbjct: 200 VTLHCPLTETTKDLINAETLSKMKKGAFLINTGRGPLIDELALVDALKTGHLGGAALDVM 259
Query: 269 EEEPYYNEELF-----SLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
+EP + ++ N+++TPHI A+ A + V +N+ F
Sbjct: 260 VKEPPEKDNPLILAAKTMPNLIITPHIAWASDSAVTTLVGKVMQNIEEF 308
>pir||S45534 phosphoglycerate dehydrogenase (EC 1.1.1.95) - Bacillus subtilis
(fragment) >gi|410116|gb|AAA67502.1| (L09228)
phosphoglycerate dehydrogenase [Bacillus subtilis]
Length = 419
Score = 136 bits (338), Expect = 5e-31
Identities = 70/198 (35%), Positives = 115/198 (57%), Gaps = 7/198 (3%)
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
RH+ + + +S EW + ++G ++YGKT+GI+G GRIG IA+R F M +
Sbjct: 6 RHIPQANISVKSREWNRTA-------YVGSELYGKTLGIVGLGRIGSEIAQRRGAFGMTV 58
Query: 178 LYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
+ E K++ + +E+L +D + + PL KET ++N+E + K+ L
Sbjct: 59 HVFDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGVRL 118
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGA 297
IN ARG +ID AL++AL+ G +AGA LDV+E EP + +L V+ TPH+G++T A
Sbjct: 119 INCARGGIIDEAALLEALENGHVAGAALDVFEVEPPVDNKLVDHPLVIATPHLGASTKEA 178
Query: 298 REGMAKLVAENLIAFKRG 315
+ +A V+E ++ F +G
Sbjct: 179 QLNVAAQVSEEVLQFAKG 196
>gb|AAD19834.1| (AF060799) D-lactate dehydrogenase [Amycolatopsis orientalis]
Length = 348
Score = 135 bits (337), Expect = 6e-31
Identities = 88/260 (33%), Positives = 137/260 (51%), Gaps = 28/260 (10%)
Query: 72 VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGE 131
++ ++G+++IDVE A GI V N D+ AD L+L R + T +
Sbjct: 99 ISTRSIGFNHIDVEYAASVGITVGNV-AYSPDSVADFTLMLMLMAVRDAKSIIRRTEVHD 157
Query: 132 WKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKE 191
++ V G ++ T+G++G GRIG A+ R RGF R+L Y +
Sbjct: 158 YRLNEVR-------GKELRDLTVGVVGTGRIGVAVLDRLRGFGCRVLAY------DTLLT 204
Query: 192 LNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKAL 251
+A++ PLDELL++SD V L VPLN +TYH+++ + ++ MK A +IN RG +I+T+AL
Sbjct: 205 ASADYVPLDELLQQSDIVTLHVPLNNDTYHLLDRKNIERMKDGAYIINTGRGPLIETEAL 264
Query: 252 IKALKEGWIAGAGLDVYEEE-----------PYYNEELFSLD---NVVLTPHIGSATFGA 297
I AL++G + GA LDV E E P +E L L+ NV+++PH T A
Sbjct: 265 ISALEDGKLGGAALDVVEGEEGIFYADCRNKPLESETLLRLEKLPNVLISPHTAYYTDHA 324
Query: 298 REGMAKLVAENLIAFKRGEV 317
+ N + F++ EV
Sbjct: 325 LSDTVENSIINCLQFRKREV 344
>pir||F83066 glycerate dehydrogenase PA4626 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9950879|gb|AAG08014.1|AE004877_1
(AE004877) glycerate dehydrogenase [Pseudomonas
aeruginosa]
Length = 323
Score = 135 bits (337), Expect = 6e-31
Identities = 90/261 (34%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
ID + P L ++ A G +NID+ A +RGI V N G T + A ALLLA A
Sbjct: 60 IDAQCIAACPELELILISATGTNNIDLAAARERGIVVANCHGYGTPSVAQHTLALLLALA 119
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
L + RSG W++ + F ++ GKT+G++G G +G A+A+ A F MR+
Sbjct: 120 TRLPDYQQAVRSGRWQQSS-QFCLLDFPIVELEGKTLGLLGHGELGGAVARLAEAFGMRV 178
Query: 178 LYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAIL 237
L +P A+ PL ELL D + L PL ++T M+ L +MK A L
Sbjct: 179 LLGQLPGRPA-----RADRLPLGELLPRVDALTLHCPLTEDTRGMLGSAELALMKPGAFL 233
Query: 238 INVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF---SLDNVVLTPHIGSAT 294
+N ARG ++D +AL AL+ G + GA DV EP N + +++TPH +
Sbjct: 234 VNTARGGLVDEQALADALRGGHLGGAATDVLSVEPPRNGNPLLAPDIPRLIVTPHNAWGS 293
Query: 295 FGAREGMAKLVAENLIAFKRG 315
AR+ + +AEN A+K G
Sbjct: 294 REARQRIVGQLAENAEAWKAG 314
>sp|Q05709|VANH_ENTFC D-SPECIFIC ALPHA-KETO ACID DEHYDROGENASE (VANCOMYCIN RESISTANCE
PROTEIN VANH) >gi|79974|pir||JQ1191 vanH protein -
Enterococcus faecium plasmid pIP816
>gi|148330|gb|AAA24789.1| (M64304) vancomycin resistance
protein [Enterococcus faecium] >gi|155041|gb|AAA65955.1|
(M97297) vanH [Transposon Tn1546]
Length = 322
Score = 134 bits (333), Expect = 2e-30
Identities = 84/260 (32%), Positives = 139/260 (53%), Gaps = 28/260 (10%)
Query: 69 LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTR 128
++ ++ ++G ++ID A + GI V N D+ AD L+L R++ +
Sbjct: 72 VKYISTRSIGCNHIDTTAAKRMGITVDNV-AYSPDSVADYTMMLILMAVRNVKSIVRSVE 130
Query: 129 SGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEV 188
+++ G + T+G++G G+IG+A+ +R RGF ++L YSR+R EV
Sbjct: 131 KHDFRLDSDR-------GKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSRSIEV 183
Query: 189 EKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
+ P DELL+ SD V L VPLN +T+++I+ E+++ MK+ A LIN RG ++DT
Sbjct: 184 N------YVPFDELLQNSDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDT 237
Query: 249 KALIKALKEGWIAGAGLDVY--EEEPYYNE------------ELFSLDNVVLTPHIGSAT 294
L+KAL+ G + GA LDV EEE +Y++ +L + NV++TPH T
Sbjct: 238 YELVKALENGKLGGAALDVLEGEEEFFYSDCTQKPIDNQFLLKLQRMPNVIITPHTAYYT 297
Query: 295 FGAREGMAKLVAENLIAFKR 314
A + +N + F+R
Sbjct: 298 EQALRDTVEKTIKNCLDFER 317
>sp|Q59642|LDHD_PEDAC D-LACTATE DEHYDROGENASE (D-LDH) >gi|897794|emb|CAA50275.1| (X70925)
D-lactate dehydrogenase [Pediococcus acidilactici]
Length = 331
Score = 134 bits (333), Expect = 2e-30
Identities = 87/285 (30%), Positives = 143/285 (49%), Gaps = 26/285 (9%)
Query: 41 LEKVKDVDALVTMLSERIDREVFERAPRLRIVANYA--VGYDNIDVEEATKRGIYVTNTP 98
++ KD D +V + ++F++ I A VG DN+ + K I ++N P
Sbjct: 39 IDLAKDYDGVVAYQQKPYTADLFDKMHEFGIHAFSLRNVGLDNVPADALKKNDIKISNVP 98
Query: 99 GVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIG 158
A A+L+ LLA R + + + G+++ W P +G ++ T+G+IG
Sbjct: 99 AYSPRAIAELSVTQLLALLRKIPEFEYKMAHGDYR-----WEPD--IGLELNQMTVGVIG 151
Query: 159 FGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKE 218
GRIG+A + F +++ Y R P +EKE L+EL ++++ + L VP K+
Sbjct: 152 TGRIGRAAIDIFKPFGAKVIAYDVFRNPALEKE-GMYVDTLEELYQQANVITLHVPALKD 210
Query: 219 TYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEE------- 271
YHM++E+ M+ ++N ARG ++DT AL+KAL G +AGA LD YE E
Sbjct: 211 NYHMLDEKAFGQMQDGTFILNFARGTLVDTPALLKALDSGKVAGAALDTYENEVGIFDVD 270
Query: 272 --------PYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAEN 308
P +N +L S NV++TPH T A + M ++ +N
Sbjct: 271 HGDQPIDDPVFN-DLMSRRNVMITPHAAFYTRPAVKNMVQIALDN 314
>sp|P52643|LDHD_ECOLI D-LACTATE DEHYDROGENASE (D-LDH) >gi|7431359|pir||G64888 D-lactate
dehydrogenase (EC 1.1.1.28) - Escherichia coli
>gi|1049265|gb|AAB51772.1| (U36928) D-lactate
dehydrogenase [Escherichia coli]
>gi|1742259|dbj|BAA14990.1| (D90776) D-lactate
dehydrogenase (EC 1.1.1.28) (D-LDH). [Escherichia coli]
>gi|1787645|gb|AAC74462.1| (AE000235) fermentative
D-lactate dehydrogenase, NAD-dependent [Escherichia coli
K12]
Length = 329
Score = 134 bits (333), Expect = 2e-30
Identities = 92/337 (27%), Positives = 163/337 (48%), Gaps = 33/337 (9%)
Query: 3 KPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDV----DALVTMLSERI 58
K V+ T++ + ++ + + F E+ E +L EK +A+ +++
Sbjct: 2 KLAVYSTKQYDKKYLQQVNESFGFEL-----EFFDFLLTEKTAKTANGCEAVCIFVNDDG 56
Query: 59 DREVFERAPR--LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLAT 116
R V E + ++ +A G++N+D++ A + G+ V P +A A+ A +++
Sbjct: 57 SRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTL 116
Query: 117 ARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMR 176
R + + + TR + G+ G+ +YGKT G+IG G+IG A+ + +GF MR
Sbjct: 117 NRRIHRAYQRTRDANFSLEGLT-------GFTMYGKTAGVIGTGKIGVAMLRILKGFGMR 169
Query: 177 ILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAI 236
+L + EL E+ L L ESD + L PL E YH++NE + MK +
Sbjct: 170 LLAFD-PYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFEQMKNGVM 228
Query: 237 LINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNEE------------LFSLD 282
++N +RG +ID++A I+ALK I G+DVYE E ++ ++ L +
Sbjct: 229 IVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACH 288
Query: 283 NVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPP 319
NV+ T H T A +++ +NL ++GE P
Sbjct: 289 NVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCP 325
>pir||S76782 D-2-hydroxy-acid dehydrogenase (EC 1.1.99.6) - Synechocystis sp.
(strain PCC 6803) >gi|1653783|dbj|BAA18694.1| (D90916)
2-hydroxyaciddehydrogenase [Synechocystis sp.]
Length = 333
Score = 134 bits (333), Expect = 2e-30
Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 31/292 (10%)
Query: 45 KDVDALVTMLSERIDREVFER--APRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLT 102
+D + ++++ V E+ A +++A + GY+N+D++ A G+ V + P
Sbjct: 43 EDCPVICLFVNDQAPAPVLEKLAAQGTKLIALRSAGYNNVDLKTAADLGLKVVHVPSYSP 102
Query: 103 DATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRI 162
A A+ L+LA R L + R + G+ LG+D++G T+G+IG G+I
Sbjct: 103 HAVAEHTVGLILALNRKLYRAYNRVRDDNFSLEGL-------LGFDLHGTTVGVIGTGKI 155
Query: 163 GQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHM 222
G A A+ GF +L Y + A + L+ELL SD + L PL ET+++
Sbjct: 156 GLAFAQIMNGFGCHLLGYDAFPNDKFTAIGQALYVSLNELLAHSDIISLHCPLLPETHYL 215
Query: 223 INEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF--- 279
IN + MK +LIN +RG +IDT+A+I+ +K I G+DVYEEE EELF
Sbjct: 216 INTNTIAQMKPGVMLINTSRGHLIDTQAVIQGIKSHKIGFLGIDVYEEE----EELFFTD 271
Query: 280 ---------------SLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGE 316
S NV++T H G T A + +A N+ F++ +
Sbjct: 272 HSDTIIQDDTFQLLQSFPNVMITAHQGFFTHNALQTIAATTLANIAEFEQNK 323
>pir||T50134 2-hydroxyacid dehydrogenase [imported] - fission yeast
(Schizosaccharomyces pombe) >gi|7024424|emb|CAB75871.1|
(AL157811) 2-hydroxyacid dehydrogenase
[Schizosaccharomyces pombe]
Length = 332
Score = 133 bits (332), Expect = 2e-30
Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 28/315 (8%)
Query: 25 EVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPR--LRIVANYAVGYDNI 82
E++ E +L EK V V ++++D + + + +++A G++N+
Sbjct: 26 EIDYHESILNKKTAVLAEKAPVVCVFV---NDKVDADTLKVLAKNGTKLIALRCAGFNNV 82
Query: 83 DVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPK 142
D++ A GI V P A A+ LLL+ R + + R ++ G+
Sbjct: 83 DLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGL----- 137
Query: 143 WFLGYDVYGKTIGIIGFGRIGQAIAKRAR-GFDMRILYYSRTRKPEVEKELNAEFKPLDE 201
LG+D++GKTIG++G GRIG +AK + GF +L + E+EK +F E
Sbjct: 138 --LGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHDIKPNKELEK-FGIQFVEQQE 194
Query: 202 LLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIA 261
+L ++DF+ L PL +T H+++E+ L MK+ +IN +RG ++DTKAL+KA++ G +
Sbjct: 195 VLAKADFLCLHCPLTPDTEHLVDEKLLASMKKGVKIINTSRGGLVDTKALVKAIESGQVG 254
Query: 262 GAGLDVYEEEP--YYN------------EELFSLDNVVLTPHIGSATFGAREGMAKLVAE 307
G +DVYE E +Y ++L + NV++T H T A +A +
Sbjct: 255 GCAMDVYEGERRLFYRDLSNEVIKDTTFQQLANFPNVLVTSHQAFFTAEALSAIAHTTLK 314
Query: 308 NLIAFKRGEVPPTLV 322
N+ F P+++
Sbjct: 315 NVSDFASQNNDPSVI 329
>pir||A82490 D-lactate dehydrogenase VCA0192 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9657584|gb|AAF96105.1| (AE004359)
D-lactate dehydrogenase [Vibrio cholerae]
Length = 331
Score = 133 bits (331), Expect = 3e-30
Identities = 82/287 (28%), Positives = 142/287 (48%), Gaps = 24/287 (8%)
Query: 42 EKVKDVDALVTMLSERIDREVFERAPR--LRIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
+ K + + +++ + V E+ + R++A G+D +D+E A + G+ V P
Sbjct: 41 QMAKGCEVVCAFVNDELHASVLEQLYQGGTRLIAMRCAGFDKVDLEAAKRLGMQVVRVPA 100
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
+A A+ ++L R K + TR + G+ +G++ +GKT+G+IG
Sbjct: 101 YSPEAVAEHTVGMMLCLNRRFHKAYQRTRDANFSLDGL-------VGFNFHGKTVGVIGS 153
Query: 160 GRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKET 219
G+IG A + +G M+IL + P+ L A + L EL +SD + L P++KE
Sbjct: 154 GKIGVATMRILQGLGMQILCFDPYPNPDAIA-LGARYVELSELFAQSDVITLHCPMSKEN 212
Query: 220 YHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNEE 277
YH++NE MK ++IN +RG+++D+ A I+ALK G I GLDVY+ E ++ ++
Sbjct: 213 YHLLNESAFDQMKDGVMIINTSRGELLDSVAAIEALKRGRIGALGLDVYDNEKDLFFQDK 272
Query: 278 ------------LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
L + NV+ T H T A +A+ N+ F
Sbjct: 273 SNDVIVDDVFRRLSACHNVLFTGHQAFLTEDALNNIAQTTLNNIQLF 319
>emb|CAA73696.1| (Y13245) NAD-dependent formate dehydrogenase [Moraxella sp.]
Length = 402
Score = 132 bits (329), Expect = 5e-30
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 11/308 (3%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTM--LSERIDREVFERAPRLR 70
E+G+ + LE + V ++ P L + + D + +++ + E +AP+L+
Sbjct: 57 ELGLRKYLESQGHELVVTSSKDGPDSELEKHLHDAEVIISQPFWPAYLTAERIAKAPKLK 116
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
+ +G D++D++ A I V +++ A+ ++L R+ + + R+G
Sbjct: 117 LALTAGIGSDHVDLQAAIDNNITVAEVTYCNSNSVAEHVVMMVLGLVRNYIPSHDWARNG 176
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE-VE 189
W YDV G +G + GRIG + + FDM + Y R R PE VE
Sbjct: 177 GWNIADCVAR-----SYDVEGMHVGTVAAGRIGLRVLRLLAPFDMHLHYTDRHRLPEAVE 231
Query: 190 KELNAEFKPL-DELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KELN + +++ D V L PL+ ET HMIN+E LK+ KR A L+N ARGK+ D
Sbjct: 232 KELNLTWHATREDMYGACDVVTLNCPLHPETEHMINDETLKLFKRGAYLVNTARGKLCDR 291
Query: 249 KALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAE 307
A+++AL+ G +AG DV+ +P N+ + ++ + +TPHI + A+ A E
Sbjct: 292 DAIVRALESGRLAGYAGDVWFPQPAPNDHPWRTMPHNGMTPHISGTSLSAQTRYAAGTRE 351
Query: 308 NLIAFKRG 315
L + G
Sbjct: 352 ILECYFEG 359
>gb|AAB36206.1| NAD(+)-dependent formate dehydrogenase, McFDH {EC 1.2.1.2}
[Mycobacterium vaccae, N10, Peptide, 400 aa]
Length = 400
Score = 131 bits (326), Expect = 1e-29
Identities = 90/308 (29%), Positives = 150/308 (48%), Gaps = 11/308 (3%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTM--LSERIDREVFERAPRLR 70
E+G+ E LE V +++ P + ++ D D +++ + E +A L+
Sbjct: 56 ELGLREYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLK 115
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
+ +G D++D++ A R + V + + A+ ++L+ R+ + ++ R G
Sbjct: 116 LALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKG 175
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE-VE 189
W H YD+ +G + GRIG A+ +R FD+ + Y R R PE VE
Sbjct: 176 GWNIADCVSH-----AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE 230
Query: 190 KELNAEFKPL-DELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KELN + +++ D V L PL+ ET HMIN+E LK+ KR A ++N ARGK+ D
Sbjct: 231 KELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDR 290
Query: 249 KALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAE 307
A+ +AL+ G +AG DV+ +P + + ++ +TPHI T A+ A E
Sbjct: 291 DAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTRE 350
Query: 308 NLIAFKRG 315
L F G
Sbjct: 351 ILECFFEG 358
>gb|AAC28494.1| (AF079881) D-3-phosphoglycerate dehydrogenase [Entodinium caudatum]
Length = 318
Score = 130 bits (323), Expect = 3e-29
Identities = 76/227 (33%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 32 EREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRG 91
E+ ++ L++ +KD +A++ S++I +E+ + + L+++A G+DNID+ A+K+G
Sbjct: 46 EKYKTKQELMDSIKDANAIIVR-SDKITKEIMDSSNNLKVIARAGAGFDNIDLGYASKKG 104
Query: 92 IYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYG 151
I V NTPG +A A+L F LL+ R+ G G ++ G
Sbjct: 105 IVVMNTPGQNANAVAELVFGLLVYAKRNFYDGSS--------------------GTELKG 144
Query: 152 KTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEV-EKELNAEFKPLDELLRESDFVV 210
K +G++ FG +G+ +A+ A+GF M I Y EV EKE ++L + D V
Sbjct: 145 KKLGLLAFGNVGRNVARIAKGFGMEIYSYDAFVPKEVLEKEGIHAVDKQEDLFTDCDIVS 204
Query: 211 LAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKE 257
L +P KET + IN + MK+ AILIN +R +VI+ K LIK ++E
Sbjct: 205 LHIPATKETINSINYDLCSKMKKNAILINTSRKEVINEKELIKLMEE 251
>pdb|2NAD|A Chain A, Nad-Dependent Formate Dehydrogenase (E.C.1.2.1.2) (Holo
Form) Complexed With Nad And Azide >gi|999848|pdb|2NAD|B
Chain B, Nad-Dependent Formate Dehydrogenase
(E.C.1.2.1.2) (Holo Form) Complexed With Nad And Azide
>gi|999845|pdb|2NAC|A Chain A, Nad-Dependent Formate
Dehydrogenase (E.C.1.2.1.2) (Apo Form)
>gi|999846|pdb|2NAC|B Chain B, Nad-Dependent Formate
Dehydrogenase (E.C.1.2.1.2) (Apo Form)
Length = 393
Score = 129 bits (322), Expect = 4e-29
Identities = 89/308 (28%), Positives = 150/308 (47%), Gaps = 11/308 (3%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTM--LSERIDREVFERAPRLR 70
E+G+ + LE V +++ P + ++ D D +++ + E +A L+
Sbjct: 56 ELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLK 115
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
+ +G D++D++ A R + V + + A+ ++L+ R+ + ++ R G
Sbjct: 116 LALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKG 175
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE-VE 189
W H YD+ +G + GRIG A+ +R FD+ + Y R R PE VE
Sbjct: 176 GWNIADCVSH-----AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE 230
Query: 190 KELNAEFKPL-DELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KELN + +++ D V L PL+ ET HMIN+E LK+ KR A ++N ARGK+ D
Sbjct: 231 KELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDR 290
Query: 249 KALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAE 307
A+ +AL+ G +AG DV+ +P + + ++ +TPHI T A+ A E
Sbjct: 291 DAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTRE 350
Query: 308 NLIAFKRG 315
L F G
Sbjct: 351 ILECFFEG 358
>sp|P33160|FDH_PSESR FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE DEHYDROGENASE) (FDH)
Length = 401
Score = 129 bits (322), Expect = 4e-29
Identities = 89/308 (28%), Positives = 150/308 (47%), Gaps = 11/308 (3%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTM--LSERIDREVFERAPRLR 70
E+G+ + LE V +++ P + ++ D D +++ + E +A L+
Sbjct: 57 ELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLK 116
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
+ +G D++D++ A R + V + + A+ ++L+ R+ + ++ R G
Sbjct: 117 LALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKG 176
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE-VE 189
W H YD+ +G + GRIG A+ +R FD+ + Y R R PE VE
Sbjct: 177 GWNIADCVSH-----AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE 231
Query: 190 KELNAEFKPL-DELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KELN + +++ D V L PL+ ET HMIN+E LK+ KR A ++N ARGK+ D
Sbjct: 232 KELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDR 291
Query: 249 KALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAE 307
A+ +AL+ G +AG DV+ +P + + ++ +TPHI T A+ A E
Sbjct: 292 DAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTRE 351
Query: 308 NLIAFKRG 315
L F G
Sbjct: 352 ILECFFEG 359
>gb|AAF36802.1|AF155139_1 (AF155139) putative lactate dehydrogenase VanHE [Paenibacillus
popilliae]
Length = 322
Score = 129 bits (322), Expect = 4e-29
Identities = 85/262 (32%), Positives = 137/262 (51%), Gaps = 28/262 (10%)
Query: 69 LRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTR 128
++ ++ ++G ++IDV+ A GI V N D+ AD L+L R+
Sbjct: 72 VKYISTRSIGCNHIDVKAAESMGIAVGNV-AYSPDSVADYTLMLMLMAIRNAKSIVSRAE 130
Query: 129 SGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEV 188
+++ V G ++ T+G++G G+IG+A+ +R RGF +L Y +
Sbjct: 131 KYDFRLDTVP-------GKELREMTVGVLGTGQIGKAVIERLRGFGCHVLAYGHS----- 178
Query: 189 EKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KE A + L+ELL++SD + + VPL +TYHMI E+++ +K+ A LIN ARG ++DT
Sbjct: 179 -KEAAANYVSLNELLQKSDILTIHVPLGTDTYHMIGHEQIEAVKQGAFLINTARGGLVDT 237
Query: 249 KALIKALKEGWIAGAGLDVYE-----------EEPYYNE---ELFSLDNVVLTPHIGSAT 294
ALIKAL+ G + GA LDV E ++P N+ +L + NV++TPH T
Sbjct: 238 GALIKALENGRLGGAALDVLEGEEGLFYFDCTQKPIDNQLLLKLHKMPNVIITPHTAYYT 297
Query: 295 FGAREGMAKLVAENLIAFKRGE 316
A + N + F+R E
Sbjct: 298 GRALYDTVEKTILNCLEFERRE 319
>pir||DELBC D-2-hydroxyisocaproate dehydrogenase (EC 1.1.1.-) - Lactobacillus
casei >gi|149538|gb|AAA25236.1| (M26929)
D-2-hydroxyisocaproate dehydrogenase [Lactobacillus
casei]
Length = 335
Score = 128 bits (319), Expect = 8e-29
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 26/300 (8%)
Query: 30 EDEREIPREILLEKVKDVDALVTMLSERIDREVFER--APRLRIVANYAVGYDNIDVEEA 87
E E E +E K D + ++ + VFE+ A ++ + VG DNID+
Sbjct: 28 EYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAM 87
Query: 88 TKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGY 147
+ GI ++N P A A+ A L R++ K ++G+++K G F+G
Sbjct: 88 KQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGT------FIGK 141
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESD 207
++ +T+G++G G IGQ K +GF +++ Y P + ++ L++L ++SD
Sbjct: 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPY--PMKGDHPDFDYVSLEDLFKQSD 199
Query: 208 FVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDV 267
+ L VP ++ H+INE +MK AI+IN AR +IDT+A++ LK G +AG G+D
Sbjct: 200 VIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDT 259
Query: 268 YE---------------EEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
YE ++P + +EL + NVVL+PHI T A M ++L+ F
Sbjct: 260 YEYETEDLLNLAKHGSFKDPLW-DELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318
>sp|P17584|DHD2_LACCA D-2-HYDROXYISOCAPROATE DEHYDROGENASE (D-HICDH)
>gi|2392297|pdb|1DXY| Structure Of
D-2-Hydroxyisocaproate Dehydrogenase
Length = 333
Score = 128 bits (319), Expect = 8e-29
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 26/300 (8%)
Query: 30 EDEREIPREILLEKVKDVDALVTMLSERIDREVFER--APRLRIVANYAVGYDNIDVEEA 87
E E E +E K D + ++ + VFE+ A ++ + VG DNID+
Sbjct: 28 EYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAM 87
Query: 88 TKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGY 147
+ GI ++N P A A+ A L R++ K ++G+++K G F+G
Sbjct: 88 KQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGT------FIGK 141
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESD 207
++ +T+G++G G IGQ K +GF +++ Y P + ++ L++L ++SD
Sbjct: 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPY--PMKGDHPDFDYVSLEDLFKQSD 199
Query: 208 FVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDV 267
+ L VP ++ H+INE +MK AI+IN AR +IDT+A++ LK G +AG G+D
Sbjct: 200 VIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDT 259
Query: 268 YE---------------EEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312
YE ++P + +EL + NVVL+PHI T A M ++L+ F
Sbjct: 260 YEYETEDLLNLAKHGSFKDPLW-DELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318
>pir||D71373 probable D-specific D-2-hydroxyacid dehydrogenase - syphilis
spirochete >gi|3322294|gb|AAC65033.1| (AE001189)
D-specific D-2-hydroxyacid dehydrogenase [Treponema
pallidum]
Length = 331
Score = 128 bits (319), Expect = 8e-29
Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 42 EKVKDVDALVTMLSERIDREVFER--APRLRIVANYAVGYDNIDVEEATKRGIYVTNTPG 99
E +K + LV M ++ EV++ A +L++++ G+D + K GI +TN P
Sbjct: 41 ELLKGYEGLVVMQFLAMEDEVYDYMGACKLKVLSTRTAGFDMYNATLLKKHGIRLTNVPS 100
Query: 100 VLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGF 159
+A + A A L RH + + F R KR W K L ++ +GI+G
Sbjct: 101 YSPNAIGEYALAAALQLTRHAREIETFVR-----KRDFRWQ-KPILSKELRCSRVGILGT 154
Query: 160 GRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKET 219
GRIGQA A+ +G +++ + ++ L + +DELL SD + L +P K++
Sbjct: 155 GRIGQAAARLFKGVGAQVVGFDPYPNDAAKEWLT--YVSMDELLSTSDVISLHMPATKDS 212
Query: 220 YHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYE-EEPYYNEE- 277
+H+IN + + MK L+N ARG VID++AL+ +L +G IAGA LD YE E PY ++
Sbjct: 213 HHLINAKTIAQMKDGVYLVNTARGAVIDSQALLDSLDKGKIAGAALDAYEFEGPYIPKDN 272
Query: 278 ------------LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGE 316
L + + ++ TPHI T A E M + RGE
Sbjct: 273 GNNPITDTVYARLVAHERIIYTPHIAFYTETAIENMVFNSLDACTTVLRGE 323
>gb|AAC23583.1| (U82965) D-lactate dehydrogenase [Streptomyces toyocaensis]
Length = 330
Score = 127 bits (317), Expect = 1e-28
Identities = 88/261 (33%), Positives = 131/261 (49%), Gaps = 29/261 (11%)
Query: 72 VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGE 131
++ ++GY++IDVE A GI V N D+ AD L+L R + T +
Sbjct: 78 ISTRSIGYNHIDVEYADSIGIVVENV-SYSPDSVADYTLMLMLMVLRDAKAIVRRTDMHD 136
Query: 132 WKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSR--TRKPEVE 189
++ V G ++ T+G++G GRIG A+ R RGF R+L + +P V
Sbjct: 137 YRLSEVR-------GKELRDLTVGVVGTGRIGTAVLDRLRGFGCRVLAHDNHPADRPGV- 188
Query: 190 KELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTK 249
AE+ PLDELLR SD V L PL T+H+++++RL MK A++IN RG +IDT+
Sbjct: 189 ----AEYVPLDELLRRSDVVTLHAPLTTATHHLLDQQRLARMKDGALVINTGRGGLIDTE 244
Query: 250 ALIKALKEGWIAGAGLDVYEEEP--YYNE------------ELFSLDNVVLTPHIGSATF 295
AL+ L+ G + GA LDV E E +Y + L L N ++TPH T
Sbjct: 245 ALVHELESGRLGGAALDVVEGEEGIFYADCRDRPMESKALLRLQELPNALITPHTAYYTD 304
Query: 296 GAREGMAKLVAENLIAFKRGE 316
A + N + F++ E
Sbjct: 305 HALRDTVENSLTNCLTFRKQE 325
>pir||JU0334 formate dehydrogenase (EC 1.2.1.2) - Pseudomonas sp
Length = 393
Score = 127 bits (316), Expect = 2e-28
Identities = 89/308 (28%), Positives = 148/308 (47%), Gaps = 11/308 (3%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTM--LSERIDREVFERAPRLR 70
E+G+ + LE V ++ P + ++ D D +++ + E +A L+
Sbjct: 56 ELGLRKYLESNGHTLVVTSDKSGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLK 115
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
+ +G D++D++ A R + V + + A+ ++L+ R+ + ++ R G
Sbjct: 116 LALTAGIGSDHVDLQSAIDRNVVTAEVTYVNSISVAEHVVMMILSLVRNYLPSHEWARKG 175
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE-VE 189
W H YD+ +G + GRIG A+ +R FD + Y R R PE VE
Sbjct: 176 GWNIADCVSH-----AYDLEAMHVGTVAAGRIGLAVLRRLAPFDHVLHYTDRHRLPESVE 230
Query: 190 KELNAEFKPL-DELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDT 248
KELN + +++ D V L PL+ ET HMIN+E LK+ KR A ++N ARGK+ D
Sbjct: 231 KELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDR 290
Query: 249 KALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNVVLTPHIGSATFGAREGMAKLVAE 307
A+ +AL+ G +AG DV+ +P + + ++ +TPHI T A+ A E
Sbjct: 291 DAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYDGMTPHISGTTLTAQARYAAGTRE 350
Query: 308 NLIAFKRG 315
L F G
Sbjct: 351 ILECFFEG 358
>gb|AAD51414.1|AF171236_1 (AF171236) 3-phosphoglycerate dehydrogenase [Homo sapiens]
Length = 405
Score = 127 bits (315), Expect = 2e-28
Identities = 64/189 (33%), Positives = 105/189 (54%)
Query: 139 WHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKP 198
W K F+G ++ GKT+GI+G GRIG+ +A R + F M+ + Y PEV + P
Sbjct: 5 WERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLP 64
Query: 199 LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEG 258
L+E+ DF+ + PL T ++N+ K+ ++N ARG ++D AL++AL+ G
Sbjct: 65 LEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 124
Query: 259 WIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVP 318
AGA LDV+ EEP + L +NV+ PH+G++T A+ + +A + +G+
Sbjct: 125 QCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSL 184
Query: 319 PTLVNREVL 327
+VN + L
Sbjct: 185 TGVVNAQAL 193
>pir||H64531 phosphoglycerate dehydrogenase - Helicobacter pylori (strain 26695)
>gi|2313177|gb|AAD07165.1| (AE000531) phosphoglycerate
dehydrogenase [Helicobacter pylori 26695]
Length = 314
Score = 126 bits (314), Expect = 3e-28
Identities = 89/303 (29%), Positives = 157/303 (51%), Gaps = 13/303 (4%)
Query: 15 VGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSER-IDREVFERAPRLRIVA 73
VG++ LE EV ++ P ++E+ ++A + +L++ I +EV + P+L+++
Sbjct: 15 VGLKALEVLKEVADFDFYEVTPPSQIVER--SIEAEIMVLNKVVITQEVLSQLPKLKLIC 72
Query: 74 NYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWK 133
A G DN+D++ A GI V N T++ A A L+ + D++ +SGE+
Sbjct: 73 ITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYS 132
Query: 134 KRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELN 193
+ + H + G G+IG G IG+ +AK A+ F +++YYS K E + L+
Sbjct: 133 QSDLFTHISDIKMGLIKGSQWGVIGLGTIGKRVAKLAQAFGAKVVYYSPKDKKEEYERLS 192
Query: 194 AEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIK 253
L +LL SD + + PLN+ T +I + L+ +K AILINV RG +++ K L +
Sbjct: 193 -----LKDLLATSDIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLAE 247
Query: 254 ALKEGWIAGAGLDVYEEEPYYNEELF----SLDNVVLTPHIGSATFGAREGMAKLVAENL 309
L+ + A DV+ +EP+ + F + ++LTPHI A + + + + EN+
Sbjct: 248 ILETKDLYYAS-DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENI 306
Query: 310 IAF 312
F
Sbjct: 307 QDF 309
>gb|AAG21503.1|AC067754_18 (AC067754) phosphoglycerate dehydrogenase, putative; 33424-31403
[Arabidopsis thaliana]
Length = 344
Score = 126 bits (313), Expect = 4e-28
Identities = 84/293 (28%), Positives = 147/293 (49%), Gaps = 25/293 (8%)
Query: 33 REIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGI 92
R++P E +K+ V M + +D V RA ++++ Y VG D +D++ ATK GI
Sbjct: 57 RDVP-----EVIKNYHICVAMTMQ-MDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGI 110
Query: 93 YVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGK 152
V P T A + + L K ++ S + G G + GK
Sbjct: 111 KVARIPSEGTGNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP------TGDTLLGK 164
Query: 153 TIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDE---------LL 203
T+ I+G+G IG +AKR + F R++ R + ++++ + +DE
Sbjct: 165 TVFILGYGNIGIELAKRLKPFGSRVIATKRFWPASI---VDSDSRLVDEKGSHEDIYTFA 221
Query: 204 RESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGA 263
++D VV+ + LNKET ++N+E + MK+ A+L+N+ARG +I+ ++ + L+ G + G
Sbjct: 222 GKADIVVVCLRLNKETAEIVNKEFICSMKKGALLVNIARGGLINYESAFQNLESGHLGGL 281
Query: 264 GLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315
G+DV EP+ N+ + NV++TPH+ T + MAK+V + + G
Sbjct: 282 GIDVAWSEPFDPNDPILKFKNVIITPHVAGVTEYSYRSMAKIVGDLALQLHEG 334
>pir||S51787 D-2-hydroxyisocaproate dehydrogenase (EC 1.1.1.-) - Lactobacillus
delbrueckii subsp. bulgaricus >gi|509245|emb|CAA46324.1|
(X65222) D-hydroxyisocaproate dehydrogenase
[Lactobacillus delbrueckii]
Length = 333
Score = 124 bits (309), Expect = 1e-27
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 29/265 (10%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG++ I+ + K + VTN P A A++ + A +L++ + GE++ R
Sbjct: 79 VGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMT----VTQAMYLLR-----KIGEFRYRM 129
Query: 137 VAWH----PKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL 192
H P + ++Y T+G+IG G IG +A+ +++ Y PE E L
Sbjct: 130 DHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSGLAEIFSAMGAKVIAYDVAYNPEFEPFL 189
Query: 193 NAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALI 252
+ D +L+E+D V L PL T +MI E++LK MK++A LIN ARG+++DT ALI
Sbjct: 190 T--YTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALI 247
Query: 253 KALKEGWIAGAGLDVYEEEPYY--------------NEELFSLDNVVLTPHIGSATFGAR 298
KAL++G IAGAGLD E Y + L + NVV+TPH T +
Sbjct: 248 KALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSI 307
Query: 299 EGMAKLVAENLIAFKRGEVPPTLVN 323
M ++ + + +G P ++VN
Sbjct: 308 RNMVQICLTDQLTIAKGRRPRSIVN 332
>gb|AAC99363.1| (AF071558) D-lactate dehydrogenase [Lactobacillus johnsonii]
Length = 337
Score = 124 bits (309), Expect = 1e-27
Identities = 83/260 (31%), Positives = 129/260 (48%), Gaps = 22/260 (8%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG DNID+++A + G +TN P DA A+ A A +++ DK + KR
Sbjct: 79 VGVDNIDMDKAKELGFEITNVPVYSPDAIAEHA----AIQAARVLRQDK-RMDEKMAKRD 133
Query: 137 VAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEF 196
+ W P +G +V + +G++G G IGQ K GF +++ Y + PE+EK+
Sbjct: 134 LRWAPT--IGREVRDQVVGVVGTGHIGQVFMKIMEGFGAKVIAYDIFKNPELEKK-GYYV 190
Query: 197 KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALK 256
LD+L +++D + L VP HMIN+E + MK +++N +RG ++DT A+I+ L
Sbjct: 191 DSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKDGVVIVNCSRGPLVDTDAVIRGLD 250
Query: 257 EGWIAGAGLDVYE-EEPYYNE-------------ELFSLDNVVLTPHIGSATFGAREGMA 302
G I G +D YE E +NE +L NV++TPH T A M
Sbjct: 251 SGKIFGFVMDTYEGEVGVFNEDWEGKEFPDARLADLIDRPNVLVTPHTAFYTTHAVRNMV 310
Query: 303 KLVAENLIAFKRGEVPPTLV 322
+N + GE P + V
Sbjct: 311 TKAFDNNLKMINGEKPDSPV 330
>pir||G71974 probable keto-acid dehydrogenase - Helicobacter pylori (strain
J99) >gi|4154596|gb|AAD05669.1| (AE001448) putative
keto-acid dehydrogenase [Helicobacter pylori J99]
Length = 314
Score = 123 bits (307), Expect = 2e-27
Identities = 91/306 (29%), Positives = 160/306 (51%), Gaps = 19/306 (6%)
Query: 15 VGIEMLEKEFEVEVWED-EREIPREILLEKVKDVDALVTMLSER-IDREVFERAPRLRIV 72
VG++ LE EV ++ E P +I+ + ++A + +L++ I +EV + P+L+++
Sbjct: 15 VGLKALEVLKEVADFDFYEVTSPNQIV---ERSIEAEIMVLNKVVITQEVLSQLPKLKLI 71
Query: 73 ANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEW 132
A G DN+D++ A GI V N T++ A A L+ + D++ +SGE+
Sbjct: 72 CITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEY 131
Query: 133 KKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL 192
+ + H + G G+IG G IG+ +AK A+ F +++Y+S K E + L
Sbjct: 132 SQSDIFTHISDIKMGLIKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDKKEEYERL 191
Query: 193 NAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTK--A 250
+ L+ELL+ S + + PLN+ T +I + L+ +K AILINV RG +++ K A
Sbjct: 192 S-----LEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLA 246
Query: 251 LIKALKEGWIAGAGLDVYEEEPYYNEELF----SLDNVVLTPHIGSATFGAREGMAKLVA 306
LI K+ + A DV+ +EP+ + F + ++LTPHI A + + + +
Sbjct: 247 LILETKDLYYAS---DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTK 303
Query: 307 ENLIAF 312
EN+ F
Sbjct: 304 ENIQDF 309
>pir||S48145 D-hydroxyisocaproate dehydrogenase - Lactobacillus delbrueckii
Length = 333
Score = 123 bits (306), Expect = 3e-27
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 29/265 (10%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG++ I+ + K + VTN P A A++ + A +L++ + GE++ R
Sbjct: 79 VGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMT----VTQAMYLLR-----KIGEFRYRM 129
Query: 137 VAWH----PKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL 192
H P + ++Y T+G+IG G IG +A+ +++ Y PE E L
Sbjct: 130 DHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSGLAEIFSAMGAKVIAYDVAYNPEFEPFL 189
Query: 193 NAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALI 252
+ D +L+E+D V L PL T +MI E++LK MK++A LIN ARG+++DT ALI
Sbjct: 190 T--YTDFDTVLKEADIVSLHHPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALI 247
Query: 253 KALKEGWIAGAGLDVYEEEPYY--------------NEELFSLDNVVLTPHIGSATFGAR 298
KAL++G IAGAGLD E Y + L + NVV+TPH T +
Sbjct: 248 KALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSI 307
Query: 299 EGMAKLVAENLIAFKRGEVPPTLVN 323
M ++ + + +G P ++VN
Sbjct: 308 RNMVQICLTDQLTIAKGRRPRSIVN 332
>gb|AAB17663.1| (U31175) D-specific D-2-hydroxyacid dehydrogenase [Staphylococcus
aureus]
Length = 330
Score = 123 bits (305), Expect = 4e-27
Identities = 92/327 (28%), Positives = 156/327 (47%), Gaps = 28/327 (8%)
Query: 1 MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDR 60
M+K F TR+ + K+ VEV +E+ ++++KD D + TM +++
Sbjct: 1 MTKIMFFGTRDYEKEMALNWGKKNNVEV-TTSKELLSSATVDQLKDYDGVTTMQFGKLEN 59
Query: 61 EVFERAPRLRI--VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATAR 118
+V+ + I +A G+D D++ A K I ++N P + A+ + ++ L R
Sbjct: 60 DVYPKLESYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVR 119
Query: 119 HLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRIL 178
++ ++ ++ W + + V T+ IIG GRIG A AK GF I
Sbjct: 120 RFPDIERRVQAHDF-----TWQAE-IMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATIT 173
Query: 179 YYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILI 238
Y P + + + E ++++D + L VP NKE+YH+ ++ +K+ AIL+
Sbjct: 174 AYDAY--PNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAMFDHVKKGAILV 231
Query: 239 NVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY--NE------------ELFSLDNV 284
N ARG VI+T LI A+ +G + GA +D YE E Y N+ EL + +
Sbjct: 232 NAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYFTNDWTNKDIDDKTLLELIEHERI 291
Query: 285 VLTPHIGSATFGAREGMAKLVAENLIA 311
++TPHI F + E + LV L A
Sbjct: 292 LVTPHI---AFFSDEAVQNLVEGGLNA 315
>emb|CAA42781.1| (X60220) D-lactate dehydrogenase [Lactobacillus delbrueckii]
>gi|228094|prf||1717214A lactate dehydrogenase
[Lactobacillus delbrueckii]
Length = 333
Score = 122 bits (303), Expect = 6e-27
Identities = 97/325 (29%), Positives = 152/325 (45%), Gaps = 40/325 (12%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKD-------VDALVTMLSERIDREVFERAPRLR 70
E K+ EVE + D+ P + L K D +D L D + + + R
Sbjct: 21 EDAHKDVEVE-YTDKLLTPETVALAKGADGVVVYQQLDYTAETLQALADNGITKMSLR-- 77
Query: 71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSG 130
VG DNID+ +A + G +TN P +A A+ A A +++ DK
Sbjct: 78 -----NVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHA----AIQAAAILRQDK-AMDE 127
Query: 131 EWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEK 190
+ + + W P +G +V + +G+IG G IGQ + GF +++ Y R PE+EK
Sbjct: 128 KVARHDLRWAPT--IGREVRDQVVGVIGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK 185
Query: 191 ELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKA 250
+ LD+L +++D + L VP HMIN+E + MK+ +++NV+RG ++DT A
Sbjct: 186 K-GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDA 244
Query: 251 LIKALKEGWIAGAGLDVYEEEP-YYNEE-------------LFSLDNVVLTPHIGSATFG 296
+I+ L G I G +DVYE E +NE+ L + NV++TPH T
Sbjct: 245 VIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPHTAFYTTH 304
Query: 297 AREGMAKLVAEN---LIAFKRGEVP 318
A M +N L+ K E P
Sbjct: 305 AVRNMVVKAFDNNLELVEGKEAETP 329
>emb|CAB92262.1| (AL356595) putative 2-hydroxyacid dehydrogenase [Streptomyces
coelicolor A3(2)]
Length = 330
Score = 121 bits (300), Expect = 1e-26
Identities = 85/272 (31%), Positives = 139/272 (50%), Gaps = 17/272 (6%)
Query: 26 VEVWEDEREIPRE-ILLEKVKDVDALVTMLSERID--REVFERAPRLRIVANYAVGYDNI 82
VEV P E L + D D +VT L ER+ + R PRL+++ + I
Sbjct: 28 VEVVSHGTHFPDEDALAAALADADIVVT-LRERVPFPGSLIARLPRLKLLVASGMRNSVI 86
Query: 83 DVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVK-GDKFTRSGEWKKRGVAWHP 141
D A G+ V T T +L +AL+L AR +V+ + G W++
Sbjct: 87 DYAAADAHGVTVCGTASSSTPPV-ELTWALILGLARGIVQEANGLREGGPWQQT------ 139
Query: 142 KWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEF-KPLD 200
+G D++G+ +G++G G+IG +A+ F MR+ +S+ E E+ E +
Sbjct: 140 ---VGADLHGRRLGLLGLGKIGGRVAQVGLAFGMRVSAWSQNLTQERTDEVGVELASSKE 196
Query: 201 ELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWI 260
ELLR +DFV + + L + T ++ L ++K TA L+N +R ++D +AL+ AL EG I
Sbjct: 197 ELLRTADFVSVHLALGERTRGLLGPAELALLKPTAYLVNTSRAAIVDQEALLAALHEGRI 256
Query: 261 AGAGLDVYEEEPY-YNEELFSLDNVVLTPHIG 291
AGAG+DV++ EP + + ++ TPH+G
Sbjct: 257 AGAGVDVFDTEPLPAGHPMRTAPRLLATPHLG 288
>emb|CAC11987.1| (AL445065) glycerate dehydrogenase related protein [Thermoplasma
acidophilum]
Length = 303
Score = 120 bits (299), Expect = 2e-26
Identities = 80/268 (29%), Positives = 143/268 (52%), Gaps = 17/268 (6%)
Query: 68 RLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFT 127
R +++ + G D+IDV + + +N G + + A+ AFALLLA A+++++ ++
Sbjct: 49 RTKMIQAISAGVDHIDVNGIPENVVLCSNA-GAYSISVAEHAFALLLAHAKNILENNELM 107
Query: 128 RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE 187
++G +++ +YGK +GI+G+G IG+ +A A+ F MR++ Y+R+
Sbjct: 108 KAGIFRQSPTTL---------LYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRS---S 155
Query: 188 VEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
V++ ++ + +L R+SDFV++A+PL +T M+N L ++ ++NVAR V+
Sbjct: 156 VDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVS 215
Query: 248 TKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMA-KLVA 306
+I LKE DV+ EP E +L N +L+PH+ G +A +L
Sbjct: 216 KPDMIGFLKERSDVWYLSDVWWNEPEITET--NLRNAILSPHVAGGMSGEIMDIAIQLAF 273
Query: 307 ENLIAFKRGEVPPTLVNREVLKVRKPGF 334
EN+ F G P +V +E +VR F
Sbjct: 274 ENVRNFFEGH-PRNVVRKEEYRVRSERF 300
>sp|P30901|LDHD_LACHE D-LACTATE DEHYDROGENASE (D-LDH) >gi|478777|pir||S29296 D-lactate
dehydrogenase (EC 1.1.1.28) - Lactobacillus helveticus
>gi|1431687|pdb|2DLD|A Chain A, D-Lactate Dehydrogenase
Complexed With Nadh And Oxamate >gi|1431688|pdb|2DLD|B
Chain B, D-Lactate Dehydrogenase Complexed With Nadh And
Oxamate >gi|43997|emb|CAA47255.1| (X66723) D-lactate
dehydrogenase [Lactobacillus helveticus]
>gi|520453|gb|AAA20464.1| (U07604) D-lactate
dehydrogenase [Lactobacillus helveticus]
>gi|1095459|prf||2109198A D-lactate dehydrogenase
[Lactobacillus helveticus]
Length = 337
Score = 120 bits (298), Expect = 2e-26
Identities = 80/264 (30%), Positives = 132/264 (49%), Gaps = 24/264 (9%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG DNID+++A + G +TN P +A A+ A A +++ DK + KR
Sbjct: 79 VGVDNIDMDKAKELGFQITNVPVYSPNAIAEHA----AIQAARVLRQDK-RMDEKMAKRD 133
Query: 137 VAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEF 196
+ W P +G +V + +G++G G IGQ + GF +++ Y + PE+EK+
Sbjct: 134 LRWAPT--IGREVRDQVVGVVGTGHIGQVFMRIMEGFGAKVIAYDIFKNPELEKK-GYYV 190
Query: 197 KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALK 256
LD+L +++D + L VP HMIN++ + MK +++N +RG+++DT A+I+ L
Sbjct: 191 DSLDDLYKQADVISLHVPDVPANVHMINDKSIAEMKDGVVIVNCSRGRLVDTDAVIRGLD 250
Query: 257 EGWIAGAGLDVYEEE-PYYNE-------------ELFSLDNVVLTPHIGSATFGAREGMA 302
G I G +D YE+E +N+ +L NV++TPH T A M
Sbjct: 251 SGKIFGFVMDTYEDEVGVFNKDWEGKEFPDKRLADLIDRPNVLVTPHTAFYTTHAVRNMV 310
Query: 303 KLVAENLIAFKRGEVP--PTLVNR 324
N + GE P P +N+
Sbjct: 311 VKAFNNNLKLINGEKPDSPVALNK 334
>prf||2124425A CtBP protein [Rattus norvegicus]
Length = 439
Score = 120 bits (298), Expect = 2e-26
Identities = 90/285 (31%), Positives = 130/285 (45%), Gaps = 36/285 (12%)
Query: 58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATA 117
+ RE E+ LRI+ G+DNID++ A GI V N P + TAD +L
Sbjct: 81 LTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLY 140
Query: 118 RHLV----------KGDKFTRSGEWKKR------GVAWHPKWFLGYDVYGKTIGIIGFGR 161
R + +RS W+ R + H W G G G
Sbjct: 141 RRATGCTRRCGRAHESRASSRSARWRPRCQDPRGDLGHHRTWSRG----------AGSGA 190
Query: 162 IGQAIAKRARGFDMRILYYSRTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETY 220
GQ + GF+ +L+Y VE+ L + L +LL SD V L LN+ +
Sbjct: 191 AGQRV-----GFN--VLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNH 243
Query: 221 HMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEE--L 278
H+IN+ +K M++ A L+N ARG ++D KAL +ALKEG I GA LDV+E EP+ + L
Sbjct: 244 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPL 303
Query: 279 FSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
N++ TPH + A M + A + G +P +L N
Sbjct: 304 KDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKN 348
>sp|P26297|LDHD_LACDE D-LACTATE DEHYDROGENASE (D-LDH) >gi|538959|pir||A38094 D-lactate
dehydrogenase (EC 1.1.1.28) - Lactobacillus delbrueckii
subsp. bulgaricus >gi|149577|gb|AAA25246.1| (M85224)
D-lactate dehydrogenase [Lactobacillus delbrueckii]
Length = 333
Score = 118 bits (293), Expect = 9e-26
Identities = 79/259 (30%), Positives = 127/259 (48%), Gaps = 25/259 (9%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG DNID+ +A + G +TN P +A A+ A R D+ + +
Sbjct: 79 VGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQAKAMDE-----KVARHD 133
Query: 137 VAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEF 196
+ W P +G +V + +G++G G IGQ + GF +++ Y R PE+EK+
Sbjct: 134 LRWAPT--IGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVIAYDIFRNPELEKK-GYYV 190
Query: 197 KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALK 256
LD+L +++D + L VP HMIN++ + MK+ +++NV+RG ++DT A+I+ L
Sbjct: 191 DSLDDLYKQADVISLHVPDVPANVHMINDKSIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250
Query: 257 EGWIAGAGLDVYEEEP-YYNEE-------------LFSLDNVVLTPHIGSATFGAREGMA 302
G + G +DVYE E +NE+ L + NV++TPH T A M
Sbjct: 251 SGKVFGYAMDVYEGEVGVFNEDREGKEFPDARLADLIARPNVLVTPHTAFYTTHAVRNMV 310
Query: 303 KLVAEN---LIAFKRGEVP 318
+N L+ K E P
Sbjct: 311 VKAFDNNLELVEGKEAETP 329
>gi|6324964 similar to formate dehydrogenases; Fdh1p [Saccharomyces cerevisiae]
>gi|2117510|pir||S67300 probable membrane protein
YOR388c - yeast (Saccharomyces cerevisiae)
>gi|1420835|emb|CAA99720.1| (Z75296) ORF YOR388c
[Saccharomyces cerevisiae]
Length = 376
Score = 115 bits (286), Expect = 6e-25
Identities = 89/324 (27%), Positives = 156/324 (47%), Gaps = 30/324 (9%)
Query: 14 EVGIEML--EKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRL 69
E+GI E+ +E+ D+ P + ++KD + ++T I R AP L
Sbjct: 30 ELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVITTPFFPAYISRNRIAEAPNL 89
Query: 70 RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRS 129
++ VG D++D+E A +R I VT G + A+ A +L R+ G + +
Sbjct: 90 KLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAIN 149
Query: 130 GEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFD-MRILYYSRTRKP-- 186
GEW GVA + YD+ K I +G GRIG + +R F+ ++LYY P
Sbjct: 150 GEWDIAGVAKNE-----YDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAE 204
Query: 187 ------EVEKELNAE------FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRT 234
E K N + L++++ +SD V + PL+K++ + N++ + MK
Sbjct: 205 AINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDG 264
Query: 235 AILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNV-----VLTP 288
A L+N ARG + + + +A+K G +AG G DV++++P + + ++DN +T
Sbjct: 265 AYLVNTARGAICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTV 324
Query: 289 HIGSATFGAREGMAKLVAENLIAF 312
HI + A++ A+ V L ++
Sbjct: 325 HISGTSLDAQKRYAQGVKNILNSY 348
>pir||C82118 erythronate-4-phosphate dehydrogenase VC2108 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656658|gb|AAF95254.1| (AE004284)
erythronate-4-phosphate dehydrogenase [Vibrio cholerae]
Length = 387
Score = 115 bits (286), Expect = 6e-25
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 36/271 (13%)
Query: 37 REILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTN 96
R + + + DVDAL+ +++ + +A RL+ V G D++D +RGI+ T
Sbjct: 34 RTLTADDLIDVDALMIRSVTKVNDALLAKANRLKFVGTATAGMDHVDQALLRERGIFFTA 93
Query: 97 TPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 156
PG A+ F++L+ A+ G+ V+ KT+GI
Sbjct: 94 APGCNKVGVAEYVFSVLMVLAQQQ-------------------------GFSVFDKTVGI 128
Query: 157 IGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLN 216
IG G++G +AK G M++L ++ + ++ EF L+ LL+++D + L P+
Sbjct: 129 IGAGQVGSYLAKCLSGIGMKVLLNDPPKQAQGDER---EFTELETLLKQADVITLHTPIT 185
Query: 217 K----ETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272
+ T+H+I+ L+ ++ ILIN ARG V+D AL L++G A LDV+E EP
Sbjct: 186 RGGEWPTHHLIDAAILEQLRSDQILINAARGPVVDNAALKARLQQGDGFTAVLDVFEFEP 245
Query: 273 YYNEELFSLDNVVLTPHIGSATFGAREGMAK 303
+ EL L TPHI A +G EG A+
Sbjct: 246 QVDMELLPL-LAFATPHI--AGYGL-EGKAR 272
>dbj|BAA14985.1| (D90775) D-lactate dehydrogenase (EC 1.1.1.28) (D-LDH).
[Escherichia coli]
Length = 229
Score = 115 bits (284), Expect = 1e-24
Identities = 71/231 (30%), Positives = 116/231 (49%), Gaps = 22/231 (9%)
Query: 103 DATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRI 162
+A A+ A +++ R + + + TR + G+ G+ +YGKT G+IG G+I
Sbjct: 3 EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLT-------GFTMYGKTAGVIGTGKI 55
Query: 163 GQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHM 222
G A+ + +GF MR+L + EL E+ L L ESD + L PL E YH+
Sbjct: 56 GVAMLRILKGFGMRLLAFD-PYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHL 114
Query: 223 INEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP--YYNEE--- 277
+NE + MK +++N +RG +ID++A I+ALK I G+DVYE E ++ ++
Sbjct: 115 LNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSND 174
Query: 278 ---------LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPP 319
L + NV+ T H T A +++ +NL ++GE P
Sbjct: 175 VIQDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCP 225
>pir||T39682 probable glycerate-and formate-dehydrogenase - fission yeast
(Schizosaccharomyces pombe) (fragment)
Length = 195
Score = 114 bits (282), Expect = 2e-24
Identities = 66/177 (37%), Positives = 94/177 (52%), Gaps = 1/177 (0%)
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR-KPEVEKELNAEFKPLDELLRES 206
D YGK +GIIG G IG++ A++ I+Y++R R + E EK L A F DELL S
Sbjct: 11 DPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSS 70
Query: 207 DFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLD 266
D + + PL T+ +I+ + + MK +IN ARG +I+ A IKA+K G +A AGLD
Sbjct: 71 DVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLD 130
Query: 267 VYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
V+ EP N+ D V + PH G T + V ++ F +P VN
Sbjct: 131 VFLNEPTPNKFWLECDKVTIQPHCGVYTNFTVAKTEECVLASIETFLDTGIPTNPVN 187
>emb|CAA21922.2| (AL033389) putative glycerate-and formate-dehydrogenase
[Schizosaccharomyces pombe]
Length = 185
Score = 114 bits (282), Expect = 2e-24
Identities = 66/177 (37%), Positives = 94/177 (52%), Gaps = 1/177 (0%)
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR-KPEVEKELNAEFKPLDELLRES 206
D YGK +GIIG G IG++ A++ I+Y++R R + E EK L A F DELL S
Sbjct: 1 DPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSS 60
Query: 207 DFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLD 266
D + + PL T+ +I+ + + MK +IN ARG +I+ A IKA+K G +A AGLD
Sbjct: 61 DVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLD 120
Query: 267 VYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVN 323
V+ EP N+ D V + PH G T + V ++ F +P VN
Sbjct: 121 VFLNEPTPNKFWLECDKVTIQPHCGVYTNFTVAKTEECVLASIETFLDTGIPTNPVN 177
>pir||D82435 D-3-phosphoglycerate dehydrogenase-related protein VCA0630
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658044|gb|AAF96531.1| (AE004393)
D-3-phosphoglycerate dehydrogenase-related protein
[Vibrio cholerae]
Length = 323
Score = 112 bits (278), Expect = 5e-24
Identities = 83/291 (28%), Positives = 143/291 (48%), Gaps = 12/291 (4%)
Query: 39 ILLEKVKDVDALVTMLSER--IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTN 96
+L+E++K +ALV ++ ER I + P L++++ ++IDV + G+ V
Sbjct: 39 VLIERLKPFEALV-LIRERTPITENLLAHLPNLKLISQTGKVSNHIDVALCERYGVTVLE 97
Query: 97 TPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 156
G A A+L + L+LA +RHL + +G W++ G LG + G T+GI
Sbjct: 98 GIGSPV-APAELCWGLILAASRHLPSYIEQLHAGHWQQNGGLG-----LGRTLSGHTLGI 151
Query: 157 IGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKP-LDELLRESDFVVLAVPL 215
G G+IGQ IA+ F M IL + + EL + E ++D + L + L
Sbjct: 152 WGLGKIGQRIAQFGHVFGMPILVWGSEASRQKALELGYQAAADKAEFFAKADVLSLHLRL 211
Query: 216 NKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY- 274
N T ++ ++ L MK ++ +N +R +++++ AL ++ A +DVYE EP
Sbjct: 212 NDATRGIVTKQDLLAMKPDSLFVNTSRAELVESGALYSVMQTNPTRQAAVDVYENEPALP 271
Query: 275 -NEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNR 324
NE L SL NV+ PH+G + E + EN++ F +L ++
Sbjct: 272 NNEPLLSLPNVLCAPHLGYVEKNSYEIYFQAAFENVVKFAHSAAKASLSDK 322
>sp|P45637|YPRA_CORGL HYPOTHETICAL 33.0 KD PROTEIN IN PROB-PROA INTERGENIC REGION
>gi|11356550|pir||T50667 D-2-hydroxy-acid dehydrogenase
homolog unkdh [imported] - Corynebacterium glutamicum
>gi|950197|gb|AAC44175.1| (U31230) unknown
[Corynebacterium glutamicum]
Length = 304
Score = 111 bits (275), Expect = 1e-23
Identities = 76/246 (30%), Positives = 123/246 (49%), Gaps = 12/246 (4%)
Query: 84 VEEATKRGIYV-----TNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVA 138
++ KRG+ N G+ D A+ L+LA H+ + +S W R
Sbjct: 60 IDALVKRGVVNEKARWANAAGLYADTVAESTIGLILAQM-HMHAATRLAKS--WSVRPEV 116
Query: 139 WHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKP 198
+ K +L +D KT+ I+G G IG + + + F+++ + + + +P +
Sbjct: 117 ENNKSWL-HD--NKTVAILGAGGIGVRLLEMLKPFNVKTIAVNNSGRPVEGADETFAMDK 173
Query: 199 LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEG 258
+ + E+D VL +PL TY ++N E L MK +A+L+NV RG +I+T L+ AL G
Sbjct: 174 AEHVWAEADVFVLILPLTDATYQIVNAETLGKMKPSAVLVNVGRGPLINTDDLVDALNNG 233
Query: 259 WIAGAGLDVYEEEPYYNEE-LFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEV 317
IAGA LDV + EP + L+ +DNVV+TPH + R +L N+ F+ GE
Sbjct: 234 TIAGAALDVTDPEPLPDSHPLWEMDNVVITPHTANTNERIRALTGELTLRNIELFEAGEQ 293
Query: 318 PPTLVN 323
T V+
Sbjct: 294 MATEVD 299
>gb|AAD23831.1|AF123482_1 (AF123482) NAD-dependent formate dehydrogenase [Mycosphaerella
graminicola]
Length = 417
Score = 111 bits (275), Expect = 1e-23
Identities = 78/278 (28%), Positives = 139/278 (49%), Gaps = 14/278 (5%)
Query: 3 KPRVFITREIPEVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSER--ID 59
+PR+ T E E+G+ + +E + V ++E +++ D + ++T +
Sbjct: 66 EPRLLGTTE-NELGLRKWIEDQGHTLVTTSDKEGENSKFDQELVDAEVIITTPFHPGYLT 124
Query: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKR--GIYVTNTPGVLTDATADLAFALLLATA 117
E +A +L+I +G D++D+ A K GI V G + A+ +L
Sbjct: 125 AERLAKAKKLKIAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVVSVAEHVVMTMLVLV 184
Query: 118 RHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
R+ V + +G+W VA + YD+ GK +G + GRIG+ + +R + FD +
Sbjct: 185 RNFVPAHEQIAAGDWNVAAVAKNE-----YDLEGKVVGTVAVGRIGERVLRRLKPFDCKE 239
Query: 178 LYYS--RTRKPEVEKELNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRT 234
L Y + PEVEKE+ L+E+L + D V + PL+++T + N+E + MK+
Sbjct: 240 LLYFDYQALAPEVEKEIGCRRVDTLEEMLAQCDVVTINCPLHEKTRGLFNKELISKMKKG 299
Query: 235 AILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272
+ L+N ARG ++ + + ALK G + G G DV+ +P
Sbjct: 300 SWLVNTARGAIVVKEEVAAALKFGQLRGYGGDVWFPKP 337
>gb|AAG18731.1| (AE004977) phosphoglycerate dehydrogenase; SerA3 [Halobacterium sp.
NRC-1]
Length = 323
Score = 110 bits (272), Expect = 3e-23
Identities = 70/248 (28%), Positives = 112/248 (44%), Gaps = 6/248 (2%)
Query: 72 VANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGE 131
+ VG D ID A G+ V N P T + A +L+ AR L + D+ TR G
Sbjct: 76 IVRAGVGVDAIDCAAAADHGVAVANAPSYCTREVGEHALSLVFGAARRLHEYDRQTRRGG 135
Query: 132 WKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKE 191
W AW+ + T+G +GFG I + +A A ++ Y +
Sbjct: 136 W-----AWNDAP-APLRLADATVGFVGFGEIARGVADTATTVAESVIAYDPYVDAATAER 189
Query: 192 LNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKAL 251
+ + +SD +V+ PL +ET +++E + A+++NV RG V+D AL
Sbjct: 190 HGVAMAEFEAVCAQSDVLVVFAPLTEETRGLVDEAACNRLPEGAVVVNVGRGAVVDDAAL 249
Query: 252 IKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIA 311
AL++G ++ A LDV EP L +V++TPH G + A E + +A + A
Sbjct: 250 AGALEDGPVSAAALDVLPTEPPVESPLVGRSDVLVTPHCGWYSEAAAESLVASLAGTVAA 309
Query: 312 FKRGEVPP 319
G+ P
Sbjct: 310 VADGDGVP 317
>pir||T34290 hypothetical protein F49E10.5 - Caenorhabditis elegans
>gi|1255868|gb|AAC69109.1| (U53341) similar to the
D-isomer specific 2-hdroxyacid dehydrogenases family
[Caenorhabditis elegans]
Length = 612
Score = 109 bits (270), Expect = 4e-23
Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 49/326 (15%)
Query: 30 EDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATK 89
+ +EI ++L E V A + S ++++E E+ L++V G DNIDV+ AT+
Sbjct: 89 QSTQEIHEKVLNEAV----AALMYHSIKLEKEDLEKFKVLKVVFRIGYGIDNIDVKAATE 144
Query: 90 RGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWF----- 144
GI V + PG + AD +L+L D F R+ WH K +
Sbjct: 145 LGIAVCHAPGDYVEDVADSTLSLIL---------DLFRRT--------YWHAKSYSETRK 187
Query: 145 -LGYD-----------VYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKEL 192
+G D V G +GI+G GR+G A+ RAR F + I++Y + +K
Sbjct: 188 TIGADQVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKAS 247
Query: 193 NAEFK-----PLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
+ + +DE + SD + L L ET +IN + L+ K ++N + +I+
Sbjct: 248 VTDLELFRVYTMDEFMSRSDCISLHCNLGDETRGIINADSLRQCKSGVYIVNTSHAGLIN 307
Query: 248 TKALIKALKEGWIAGAGLDVYEE---EPYYNEELFSLDNVVLTPHIGSATFGAREGMAKL 304
L ALK G + GA LDV++ +P L N++ TPH T + + +
Sbjct: 308 ENDLAAALKNGHVKGAALDVHDSVRFDPNCLNPLVGCPNIINTPHSAWMTEASCKDLRIN 367
Query: 305 VAENLIAFKRGEVPPTL---VNREVL 327
A+ + G P L +N+E +
Sbjct: 368 AAKEIRKAINGRCPQDLTHCINKEAV 393
>sp|P51011|LDHD_LEUMC D-LACTATE DEHYDROGENASE (D-LDH) >gi|508506|gb|AAA99506.1| (L29327)
D-lactate dehydrogenase [Leuconostoc mesenteroides]
Length = 331
Score = 109 bits (269), Expect = 6e-23
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 22/260 (8%)
Query: 77 VGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRG 136
VG DNID + A + ++N P +A A+ + L R D + KR
Sbjct: 78 VGTDNIDFDAAREFNFNISNVPVYSPNAIAEHSMLQLSRLLRRTKALD-----AKIAKRD 132
Query: 137 VAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEF 196
+ W P G ++ +T+G+IG G IG+ +GF +++ Y + E++ E
Sbjct: 133 LRWAPT--TGREMRMQTVGVIGTGHIGRVAINILKGFGAKVIAYDKYPNAELQAE-GLYV 189
Query: 197 KPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALK 256
LDEL ++D + L VP E +H+IN + + MK +++N ARG ++D A+I L
Sbjct: 190 DTLDELYAQADAISLYVPGVPENHHLINADAIAKMKDGVVIMNAARGNLMDIDAIIDGLN 249
Query: 257 EGWIAGAGLDVYEEEPYYN--------------EELFSLDNVVLTPHIGSATFGAREGMA 302
G I+ G+DVYE E + +L + +NV++TPH T A M
Sbjct: 250 SGKISDFGMDVYENEVACSMKIGLVKNSPDAKIADLIARENVMITPHTAFYTTKAVLEMV 309
Query: 303 KLVAENLIAFKRGEVPPTLV 322
+ +AF +GE P V
Sbjct: 310 HQSFDAAVAFAKGEKPAIAV 329
>sp|Q07103|FDH_NEUCR FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE DEHYDROGENASE) (FDH)
>gi|539386|pir||A47117 formate dehydrogenase (EC
1.2.1.2) - Neurospora crassa >gi|1321604|gb|AAA99900.1|
(L13964) formate dehydrogenase [Neurospora crassa]
>gi|11595632|emb|CAC18252.1| (AL451018) formate
dehydrogenase [Neurospora crassa]
Length = 375
Score = 108 bits (268), Expect = 8e-23
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 21/277 (7%)
Query: 61 EVFERAPRLRIVANYAVGYDNIDVEEATKR--GIYVTNTPGVLTDATADLAFALLLATAR 118
E RA +L++ +G D++D+ A K GI V G + A+ +L R
Sbjct: 78 ERLARAKKLKLAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVVSVAEHVLMTILVLVR 137
Query: 119 HLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRIL 178
+ V + + G W A + +D+ GK +G +G GRIG+ + +R + FD + L
Sbjct: 138 NFVPAHEQIQEGRWDVAEAAKNE-----FDLEGKVVGTVGVGRIGERVLRRLKPFDCKEL 192
Query: 179 YYSRTRKPEVEKELNAEFK---PLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTA 235
Y + EKE + L+E+L + D V + PL+++T + N+E + MK+ +
Sbjct: 193 LYYDYQPLSAEKEAEIGCRRVADLEEMLAQCDVVTINCPLHEKTQGLFNKELISKMKKGS 252
Query: 236 ILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP-------YYNEELFSLDNVVLTP 288
L+N ARG ++ + + +ALK G + G G DV+ +P Y + F N + P
Sbjct: 253 WLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQPAPQDHPLRYAKNPFGGGN-AMVP 311
Query: 289 HIGSATFGAREGMA---KLVAENLIAFKRGEVPPTLV 322
H+ + A++ A K + E+ ++ K P L+
Sbjct: 312 HMSGTSLDAQKRYAAGTKAIIESYLSGKHDYRPEDLI 348
>emb|CAC04225.1| (AL391515) putative dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 312
Score = 103 bits (255), Expect = 3e-21
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 22/282 (7%)
Query: 45 KDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVE-EATKRGIYVTNTPGVLTD 103
KD+D IDR + RLR V + G D + E + R + + N
Sbjct: 51 KDIDV--------IDRPL-PHMTRLRAVQALSSGTDELRAELDRLPRPVTLCNAGAAPAP 101
Query: 104 ATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIG 163
+TA+LA L+LA+ R + + + G AW P+ F +YG+++ ++G+G +G
Sbjct: 102 STAELALTLILASLRGIPESVRAQDGG-------AWGPEVFPS--LYGRSVLVVGYGAVG 152
Query: 164 QAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMI 223
A+ + F + + + + + L L+ ++D VVL+ PL +T +
Sbjct: 153 SALEELLVPFGCAVTRVAGADRDAPRGPVRSAAH-LPRLVSDADVVVLSTPLTPQTRQLF 211
Query: 224 NEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLD 282
+ L MK A+L+NVARG V+DT AL+K EG + A LDV + EP L
Sbjct: 212 DAGMLARMKDGALLVNVARGAVVDTDALLKETHEGRLR-AALDVTDPEPLPPGHPLRETP 270
Query: 283 NVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNR 324
V++TPH+G+ T + +L+ L F GE +V+R
Sbjct: 271 GVLITPHVGAFTSSLWPRLEQLIRHQLSRFAAGEELENIVSR 312
>sp|Q03134|FDH_EMENI PROBABLE FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE
DEHYDROGENASE) (FDH) >gi|419908|pir||S30088 aciA protein
- Emericella nidulans >gi|5545|emb|CAA77687.1| (Z11612)
AciA [Emericella nidulans] >gi|384296|prf||1905380A aciA
gene [Emericella nidulans]
Length = 377
Score = 102 bits (253), Expect = 4e-21
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 30/284 (10%)
Query: 14 EVGI-EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSER--IDREVFERAPRLR 70
E+GI + +E++ V +++ +++ D + ++T + E +A L+
Sbjct: 23 ELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVIITTPFHPGYLTAERLAKAKNLK 82
Query: 71 IVANYAVGYDNIDVEEATKR--GIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTR 128
+ +G D++D++ A K GI V G + A+ +L R+ V R
Sbjct: 83 LAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIR 142
Query: 129 SGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMR-ILYYS-RTRKP 186
+G+W VA + +D+ K +G +G GRIG+ + +R + FD + +LYY + +P
Sbjct: 143 NGDWNVAAVAKNE-----FDLENKVVGTVGVGRIGERVLRRLKPFDCKELLYYDYQPLRP 197
Query: 187 EVEKELNA-EFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMK------------- 232
EVEKE+ A L+E++ + D V + PL+++T + N+E + MK
Sbjct: 198 EVEKEIGARRVDSLEEMVSQCDVVTINCPLHEKTRGLFNKELISKMKPGKSALLYLIIPM 257
Query: 233 ----RTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEP 272
+ + L+N ARG ++ + + +ALK G + G G DV+ +P
Sbjct: 258 LMYHKGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQP 301
>pdb|1QP8|A Chain A, Crystal Structure Of A Putative Formate Dehydrogenase From
Pyrobaculum Aerophilum >gi|5542415|pdb|1QP8|B Chain B,
Crystal Structure Of A Putative Formate Dehydrogenase
From Pyrobaculum Aerophilum
Length = 303
Score = 102 bits (253), Expect = 4e-21
Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 29/306 (9%)
Query: 30 EDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATK 89
E E E+ + + + D+ + L RI E + PRL+ + G D++ E
Sbjct: 12 EAEEELRKYFKIVRGGDLGNVEAALVSRITAEELAKXPRLKFIQVVTAGLDHLPWESIPP 71
Query: 90 RGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDV 149
+ V G DA A+ A ALLLA + +++ GE KRG G DV
Sbjct: 72 H-VTVAGNAGSNADAVAEFALALLLAPYKRIIQ------YGEKXKRGD-------YGRDV 117
Query: 150 -----YGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLR 204
G+ + ++G G IG + K ++ +SRT K + N+ L+E LR
Sbjct: 118 EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNS----LEEALR 173
Query: 205 ESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAG 264
E+ V A+PLNK T ++ + L + A+ +NV R +V+D +++ LKE
Sbjct: 174 EARAAVCALPLNKHTRGLVKYQHLALXAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFA 233
Query: 265 LDVY--EEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAE---NLIAFKRGEVPP 319
DV+ + + E FSL NVV TP + +G + V E NLI + G P
Sbjct: 234 SDVWWGRNDFAKDAEFFSLPNVVATPWVAGG-YGNERVWRQXVXEAVRNLITYATGGRPR 292
Query: 320 TLVNRE 325
+ RE
Sbjct: 293 NIAKRE 298
>emb|CAA09466.2| (AJ011046) formate dehydrogenase [Candida boidinii]
Length = 364
Score = 102 bits (251), Expect = 8e-21
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 20/299 (6%)
Query: 32 EREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATK 89
++E +L + + D D ++T I +E ++A +L++V VG D+ID++ +
Sbjct: 46 DKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHIDLDYINQ 105
Query: 90 RG--IYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGY 147
G I V G + A+ +L R+ V + + +W+ +A Y
Sbjct: 106 TGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKD-----AY 160
Query: 148 DVYGKTIGIIGFGRIGQAIAKRARGFDMR-ILYYSRTRKP-EVEKELNAE-FKPLDELLR 204
D+ GKTI IG GRIG + +R F+ + +LYY P + E+++ A + ++EL+
Sbjct: 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVA 220
Query: 205 ESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAG 264
++D V + PL+ T +IN+E L K+ A L+N ARG + + + AL+ G + G G
Sbjct: 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYG 280
Query: 265 LDVYEEEPYYNE-------ELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGE 316
DV+ +P + + N +TPH T A+ A+ L +F G+
Sbjct: 281 GDVWFPQPAPKDHPWRDMRNKYGAGN-AMTPHYSGTTLDAQTRYAQGTKNILESFFTGK 338
>pir||C83473 erythronate-4-phosphate dehydrogenase PA1375 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9947319|gb|AAG04764.1|AE004567_3 (AE004567)
erythronate-4-phosphate dehydrogenase [Pseudomonas
aeruginosa]
Length = 380
Score = 100 bits (246), Expect = 3e-20
Identities = 77/278 (27%), Positives = 128/278 (45%), Gaps = 36/278 (12%)
Query: 33 REIP-REILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRG 91
R +P R I + +VD L+ + R +P +R V +G D++D++ + G
Sbjct: 23 RRLPGRAIDRAALAEVDVLLVRSVTEVSRAALAGSP-VRFVGTCTIGTDHLDLDYFAEAG 81
Query: 92 IYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYG 151
I ++ PG D LLA A G D+
Sbjct: 82 IAWSSAPGCNARGVVDYVLGCLLAMAE-------------------------VRGADLAE 116
Query: 152 KTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVL 211
+T G++G G++G + + RG ++L P +E + EF L+ LL E+D + L
Sbjct: 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCD---PPRQAREPDGEFVSLERLLAEADVISL 173
Query: 212 AVPLNKE----TYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDV 267
PLN++ T H+++E RL ++ L+N +RG V+D +AL + L+ G LDV
Sbjct: 174 HTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDV 233
Query: 268 YEEEPYYNEELFSLDNVVLTPHI-GSATFGAREGMAKL 304
+E EP + EL + ++ TPHI G + G G A++
Sbjct: 234 WEGEPQADPEL-AARCLIATPHIAGYSLEGKLRGTAQI 270
>sp|P33677|FDH_PICAN FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE DEHYDROGENASE) (FDH)
Length = 362
Score = 99.5 bits (244), Expect = 5e-20
Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 18/294 (6%)
Query: 18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANY 75
+ LEK+ V ++E +L + + D D +++ I +E ++A +L+++
Sbjct: 32 DWLEKQGHDVVVTSDKEGQNSVLEKNISDADVIISTPFHPAYITKERIDKAKKLKLLVVA 91
Query: 76 AVGYDNIDVEEATKRG--IYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWK 133
VG D+ID++ + G I V G + A+ +L R+ V + SG W
Sbjct: 92 GVGSDHIDLDYINQSGRDISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIISGGWN 151
Query: 134 KRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMR-ILYYS-RTRKPEVEKE 191
+A +D+ GK I IG GRIG + +R F+ + +LYY ++ E E++
Sbjct: 152 VAEIAKD-----SFDIEGKVIATIGAGRIGYRVLERLVAFNPKELLYYDYQSLSKEAEEK 206
Query: 192 LNAE-FKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKA 250
+ A + EL+ ++D V + PL+ + ++N E LK K+ A L+N ARG + +
Sbjct: 207 VGARRVHDIKELVAQADIVTINCPLHAGSKGLVNAELLKHFKKGAWLVNTARGAICVAED 266
Query: 251 LIKALKEGWIAGAGLDVYEEEPYYNEELF-SLDNV-----VLTPHIGSATFGAR 298
+ A+K G + G G DV+ +P + + S+ N +TPH + A+
Sbjct: 267 VAAAVKSGQLRGYGGDVWFPQPAPKDHPWRSMANKYGAGNAMTPHYSGSVIDAQ 320
>pir||T35826 probable dehydrogenase - Streptomyces coelicolor
>gi|4467261|emb|CAB37586.1| (AL035569) putative
dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 313
Score = 97.5 bits (239), Expect = 2e-19
Identities = 78/262 (29%), Positives = 124/262 (46%), Gaps = 21/262 (8%)
Query: 69 LRIVANYAVGYDNIDVEEA-TKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFT 127
+++V + G D+++ G+ + N GV +TA+L AL+LA+ R + +
Sbjct: 63 VQVVQTLSAGIDHVEPGLGHLPAGVRLCNARGVHEASTAELTLALILASLRGIPDFVRAQ 122
Query: 128 RSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPE 187
GEW + P + +T+ I+G+G IG AI R F++ +
Sbjct: 123 DRGEWLG---GFRPA------LADRTVLIVGYGSIGAAIEDRLVPFEVAPVVRVARSART 173
Query: 188 VEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVID 247
E+ L LL ++D V+L+ PL + T + E L MK A+L+NVARG V+D
Sbjct: 174 TERGPVHPLTELPRLLPQADVVILSTPLTEATRGLAGAEFLARMKDGALLVNVARGPVVD 233
Query: 248 TKALIKALKEGWIAGAGLDVYEEEPY-YNEELFSLDNVVLTPHIGSATFGAREGMAKLVA 306
TKAL+ L+ G + A LDV + EP L+ +V++PH G T +L+
Sbjct: 234 TKALLAELESGRLT-AALDVTDPEPLPPGHPLWHAPGIVVSPHAGGPTSAFLPRAERLLV 292
Query: 307 ENLIAFKRGEVPPTLVNREVLK 328
+ L F VNRE L+
Sbjct: 293 DQLTRF---------VNREPLR 305
>pir||D75365 probable 2-hydroxyacid dehydrogenase - Deinococcus radiodurans
(strain R1) >gi|6459468|gb|AAF11256.1|AE002011_7
(AE002011) 2-hydroxyacid dehydrogenase, putative
[Deinococcus radiodurans]
Length = 311
Score = 87.4 bits (213), Expect = 2e-16
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 17/274 (6%)
Query: 46 DVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDAT 105
+ +V L+ R+ P L+ V G ++ V+ +G + N + A
Sbjct: 44 EAQGVVLWLANGATRDALLSVPGLQWVLTLTAGIEH--VQGKLPQGAALYNAHRLHDRAV 101
Query: 106 ADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQA 165
A A +LA +R L + + GEW + +A L G+ + + G+G IG+
Sbjct: 102 AVHVVAGMLAASRGLHRFRDAQQRGEWVRTSLADTGLSTLD----GQKVVLWGYGHIGKI 157
Query: 166 IAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINE 225
+ + F ++ Y T K E + +D L E+D+VVL +P + T ++N
Sbjct: 158 VEELLAPFGAQV--YGLTSKTEPDL--------VDYRLAEADWVVLLLPSTERTRGIVNA 207
Query: 226 ERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYY-NEELFSLDNV 284
ERL +K L N RG +I T L+ AL G + GA LDV + EP L+ +NV
Sbjct: 208 ERLTALKPGVWLSNQGRGDLIVTDDLLAALDSGHLGGAVLDVTDPEPLLAGHPLWDRENV 267
Query: 285 VLTPHIGSATFGAREGMAKLVAENLIAFKRGEVP 318
V+TPHI S T E A ++ +G P
Sbjct: 268 VITPHIASITSDLLERGAAYARSFILDVLQGRTP 301
>gb|AAF27940.1|AC005767_1 (AC005767) D-3-phosphoglycerate dehydrogenase [Leishmania major]
Length = 185
Score = 81.9 bits (199), Expect = 9e-15
Identities = 47/110 (42%), Positives = 66/110 (59%), Gaps = 6/110 (5%)
Query: 228 LKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELF-----SLD 282
+++MK+ + LIN +RG V+D +AL KAL+EG +AGA +DVY EEP N+EL +
Sbjct: 1 IRLMKKGSYLINASRGTVVDLEALAKALREGHLAGAAIDVYPEEPGSNKELHRTPLQGIS 60
Query: 283 NVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKVRKP 332
NV+LTPH+G +T A+E + V L F + VN L VR P
Sbjct: 61 NVILTPHVGGSTCEAQEAIGVEVGTALAKFVTSGITAGAVNFPEL-VRPP 109
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.139 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121477666
Number of Sequences: 2977
Number of extensions: 5045573
Number of successful extensions: 14565
Number of sequences better than 1.0e-10: 207
Number of HSP's better than 0.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 13968
Number of HSP's gapped (non-prelim): 210
length of query: 335
length of database: 189,106,746
effective HSP length: 56
effective length of query: 279
effective length of database: 155,591,474
effective search space: 43410021246
effective search space used: 43410021246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)