BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2375 (PAB2375) DE:aminopeptidase from family M42
(331 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus a... 653 0.0
pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii ... 566 e-160
pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyr... 273 2e-72
sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCAN... 198 1e-49
prf||2113327A endoglucanase [Clostridium thermocellum] 198 1e-49
pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] ... 188 7e-47
pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus a... 188 9e-47
pir||E71193 probable operon protein Frv - Pyrococcus horikoshii ... 187 2e-46
pir||E71029 probable Frv operon protein FrvX - Pyrococcus horiko... 185 6e-46
sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir... 185 8e-46
pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus a... 183 3e-45
pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subt... 176 2e-43
dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus hal... 173 3e-42
pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoaut... 169 4e-41
gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus... 168 9e-41
pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subt... 167 1e-40
pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 162 7e-39
pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 159 6e-38
pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 149 5e-35
dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus hal... 144 1e-33
gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus] >gi|74... 139 3e-32
pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasm... 139 3e-32
sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA... 128 8e-29
sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108... 127 2e-28
gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp.... 111 9e-24
sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|743557... 109 6e-23
pir||E75542 probable endoglucanase - Deinococcus radiodurans (st... 108 1e-22
pir||S56530 hypothetical protein f383 - Escherichia coli >gi|537... 106 3e-22
pir||E65012 hypothetical protein b2384 - Escherichia coli (strai... 104 2e-21
pir||B71121 hypothetical protein PH0737 - Pyrococcus horikoshii ... 83 4e-15
pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyro... 80 5e-14
pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis >gi|152... 74 3e-12
>pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458947|emb|CAB50434.1| (AJ248287)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 331
Score = 653 bits (1667), Expect = 0.0
Identities = 331/331 (100%), Positives = 331/331 (100%)
Query: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMA 60
MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMA
Sbjct: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMA 60
Query: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK
Sbjct: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
Query: 121 GKDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVAL 180
GKDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVAL
Sbjct: 121 GKDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVAL 180
Query: 181 IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGDVK 240
IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGDVK
Sbjct: 181 IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGDVK 240
Query: 241 LGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQERCKALALSV 300
LGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQERCKALALSV
Sbjct: 241 LGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQERCKALALSV 300
Query: 301 PIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
PIKYLHSEVEMLQINDLENLIKLIEAIALEL
Sbjct: 301 PIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
>pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii
>gi|3256924|dbj|BAA29607.1| (AP000002) 332aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 332
Score = 566 bits (1443), Expect = e-160
Identities = 283/331 (85%), Positives = 306/331 (91%)
Query: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMA 60
M +IE+LK+FTQIPGISGYEERIRE II EIKDFADYKVDAIGNLIVELGEG+ER+LFMA
Sbjct: 2 MSMIEKLKKFTQIPGISGYEERIREEIIREIKDFADYKVDAIGNLIVELGEGEERILFMA 61
Query: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
HMDEIGLLITGIT++GKLRFRKVGGIDDRLLYGRHV+VVTE I+DGVIGA PPHLSL +
Sbjct: 62 HMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLER 121
Query: 121 GKDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVAL 180
K VIPW++LVIDIGAESKEEALELVKPLDFAVFKKHFSVLNG+YVSTR LDDRFGVVAL
Sbjct: 122 DKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVAL 181
Query: 181 IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGDVK 240
IEAIKDLVDH+L GKV+FAFTVQEE+GLKGA+FLAN Y P+YAFAIDSFACC+ LTGDVK
Sbjct: 182 IEAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAIDSFACCSPLTGDVK 241
Query: 241 LGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQERCKALALSV 300
LG GPVIRAVDNSAIYSRDLARKV SIAEKN I IQIGVTGGGTDAS FQ+R K LALSV
Sbjct: 242 LGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGVTGGGTDASAFQDRSKTLALSV 301
Query: 301 PIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
PIKYLHSEVE L +NDLE L+KLIEA+A EL
Sbjct: 302 PIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332
>pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyrum pernix
(strain K1) >gi|5105013|dbj|BAA80327.1| (AP000061) 339aa
long hypothetical deblocking aminopeptidase [Aeropyrum
pernix]
Length = 339
Score = 273 bits (691), Expect = 2e-72
Identities = 151/333 (45%), Positives = 216/333 (64%), Gaps = 11/333 (3%)
Query: 3 IIEELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGDERLLFMAH 61
++E L+E PG SG+E+ +R ++ +++ D VD +GN++V G+ RLL AH
Sbjct: 1 MLETLRELVFTPGPSGFEDLVRSVVVSRLRELGLDPVVDELGNVVVNPSGGEPRLLAAAH 60
Query: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKI-IDGVIGAIPPHLSLGK 120
MDE+G +ITG+ +DG L FRK+GGIDDR+L G+HV ++ + I+GVIG PPHL L +
Sbjct: 61 MDELGFVITGVGDDGLLAFRKLGGIDDRILPGQHVEILLDGGARIEGVIGITPPHLQLDR 120
Query: 121 GKDVIP--WHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVL-NGRYVSTRSLDDRFG 176
G+ P WHEL IDIGA+S+ EA EL VKPL AVFKKH+S L GR +++R DDR G
Sbjct: 121 GEAEKPLRWHELRIDIGAQSRAEAEELGVKPLQPAVFKKHWSTLAGGRALASRGFDDRAG 180
Query: 177 VVALIEAIKDLVDH--DLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCN- 233
V L+E K + + D GG + A+TVQEE+GL+GA ++A+R P+ A+D+ ACC+
Sbjct: 181 VALLLELAKRIAEGRVDAGG-IALAWTVQEEVGLRGASYVASRMKPKAFLAVDTMACCHP 239
Query: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQER- 292
+TG + GGGPV+RA+DN I R L + A + +Q GG TDA+ FQ
Sbjct: 240 AVTGHTRPGGGPVVRALDNQHITPRWLVELLEEAARSAGLELQYATAGGTTDAAAFQRTG 299
Query: 293 CKALALSVPIKYLHSEVEMLQINDLENLIKLIE 325
+ A+ +P+KY HS E+L ++DLE +KL+E
Sbjct: 300 VPSAAIGIPLKYTHSTAEVLYLSDLEGALKLLE 332
>sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCANASE) (CELLULASE M)
Length = 330
Score = 198 bits (497), Expect = 1e-49
Identities = 134/336 (39%), Positives = 198/336 (58%), Gaps = 31/336 (9%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLI-VELGEGDERLLFMAHMDE 64
LK+FT I G+SG EE IRE IIEEIK+ D KVD +GNLI V+ G+G ++++ AHMDE
Sbjct: 10 LKKFTGIVGVSGNEEEIREAIIEEIKECVDEIKVDTLGNLIAVKKGKG-KKIMVAAHMDE 68
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKDV 124
IG+++T I + G LRF VGG+ G+ V K +GV+GA+ L K+
Sbjct: 69 IGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRV------KFKNGVVGAVYYEEKLEDMKN- 121
Query: 125 IPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIEAI 184
+ ++ IDIGA S+EEAL++V D A F +VL G V +++LD+R G +++AI
Sbjct: 122 LQLSKMYIDIGARSREEALKMVNIGDVACFVGD-AVLQGDTVISKALDNRSGCAVVVKAI 180
Query: 185 KDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGD------ 238
K+L D ++ F FTVQEE+GL+GA+ A P+ A A+D +TGD
Sbjct: 181 KELKKTD--NEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDV-----TMTGDTPESHP 233
Query: 239 --VKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQERCKA 295
VK GGGP I+ D S I ++ + + A++N IP Q+ + GG+D
Sbjct: 234 MEVKCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLEILEAGGSDPGSIHLTAGG 293
Query: 296 L---ALSVPIKYLHSEVEMLQINDLENLIK-LIEAI 327
+ A+S+P++Y+HS VE ++D+ N +K L+EAI
Sbjct: 294 IPSGAISIPVRYVHSPVETASMSDINNAVKLLVEAI 329
>prf||2113327A endoglucanase [Clostridium thermocellum]
Length = 325
Score = 198 bits (497), Expect = 1e-49
Identities = 134/336 (39%), Positives = 198/336 (58%), Gaps = 31/336 (9%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLI-VELGEGDERLLFMAHMDE 64
LK+FT I G+SG EE IRE IIEEIK+ D KVD +GNLI V+ G+G ++++ AHMDE
Sbjct: 5 LKKFTGIVGVSGNEEEIREAIIEEIKECVDEIKVDTLGNLIAVKKGKG-KKIMVAAHMDE 63
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKDV 124
IG+++T I + G LRF VGG+ G+ V K +GV+GA+ L K+
Sbjct: 64 IGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRV------KFKNGVVGAVYYEEKLEDMKN- 116
Query: 125 IPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIEAI 184
+ ++ IDIGA S+EEAL++V D A F +VL G V +++LD+R G +++AI
Sbjct: 117 LQLSKMYIDIGARSREEALKMVNIGDVACFVGD-AVLQGDTVISKALDNRSGCAVVVKAI 175
Query: 185 KDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGD------ 238
K+L D ++ F FTVQEE+GL+GA+ A P+ A A+D +TGD
Sbjct: 176 KELKKTD--NEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDV-----TMTGDTPESHP 228
Query: 239 --VKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQERCKA 295
VK GGGP I+ D S I ++ + + A++N IP Q+ + GG+D
Sbjct: 229 MEVKCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLEILEAGGSDPGSIHLTAGG 288
Query: 296 L---ALSVPIKYLHSEVEMLQINDLENLIK-LIEAI 327
+ A+S+P++Y+HS VE ++D+ N +K L+EAI
Sbjct: 289 IPSGAISIPVRYVHSPVETASMSDINNAVKLLVEAI 324
>pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] - Pyrococcus
furiosus
Length = 348
Score = 188 bits (473), Expect = 7e-47
Identities = 128/335 (38%), Positives = 185/335 (55%), Gaps = 18/335 (5%)
Query: 5 EELKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIV-ELGEGDERLLFMAH 61
E LK+ + PG+SGYE IR+ +IEEIKD+ D VD +GN+I + GEG +++ AH
Sbjct: 5 ELLKKVVEAPGVSGYEFMGIRDVVIEEIKDYVDEVNVDKLGNVIAHKKGEGP-KVMIAAH 63
Query: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSV-VTEDKIIDGVIGAIPPHLSLGK 120
MD+IGL++T I +G LR +GGID R L + +V + + K I GV G++PPH+ +
Sbjct: 64 MDQIGLMVTHIEKNGFLRVAPIGGIDPRTLIAQRFNVWIDKGKFIYGVGGSVPPHIQKPE 123
Query: 121 GKDVIP-WHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVV 178
+ P W ++ IDIGAESKEEA EL VK + L + + DDR V
Sbjct: 124 DRKKAPDWDQIFIDIGAESKEEAEELGVKIGTIVTWDGRLERLGKHRFVSIAFDDRIAVY 183
Query: 179 ALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCN----- 233
LIE + L D + F TVQEE+GL+GAR A P+Y FAID +
Sbjct: 184 TLIETARQL--QDTKADIYFVATVQEEVGLRGARTSAFGINPDYGFAIDVTIAADVPGTP 241
Query: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQER 292
E +LG G I+ +D S I + R + +A+K +IP Q + GGGTDA
Sbjct: 242 EHKQVTQLGKGTAIKIMDRSVICHPTIVRWMEELAKKYEIPYQWDILLGGGTDAGAIHLT 301
Query: 293 CKAL---ALSVPIKYLHSEVEMLQINDLENLIKLI 324
+ A+S+P +Y+HS E++ D++ +KL+
Sbjct: 302 RAGVPTGAVSIPARYIHSNAEVVDERDVDASVKLM 336
>pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458068|emb|CAB49557.1| (AJ248285)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 348
Score = 188 bits (472), Expect = 9e-47
Identities = 123/334 (36%), Positives = 181/334 (53%), Gaps = 16/334 (4%)
Query: 5 EELKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHM 62
E LK+ + PG+SGYE IR+ +IEEIKD+ D KVD +GN+I +++ AHM
Sbjct: 5 ELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHRKGEGPKVMIAAHM 64
Query: 63 DEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSV-VTEDKIIDGVIGAIPPHLSLGKG 121
D+IGL++T I +G LR +GG+D + L + V + +DK I GV ++PPH+ +
Sbjct: 65 DQIGLMVTNIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKDKFIYGVGASVPPHIQKPEE 124
Query: 122 KDVIP-WHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179
+ P W ++ IDIGAESKEEA E+ V+ + L + + DDR V
Sbjct: 125 RKKAPEWDQIFIDIGAESKEEAEEMGVRIGTVITWDGRLERLGKHRFVSIAFDDRIAVYT 184
Query: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCN-----E 234
++E + L D V F TVQEE+GL+GAR A P+Y FAID + E
Sbjct: 185 MLEVARQL--EDTKADVYFVATVQEEVGLRGARTSAFAIEPDYGFAIDVTIAADVPGTPE 242
Query: 235 LTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQERC 293
LG G I+ +D S I + R + +A+K +IP Q+ + GGGTDA
Sbjct: 243 HKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKYEIPYQLEILLGGGTDAGAIHLTK 302
Query: 294 KAL---ALSVPIKYLHSEVEMLQINDLENLIKLI 324
+ ALSVP +Y+HS E++ D++ +KL+
Sbjct: 303 AGVPTGALSVPARYIHSNAEVVDERDVDATVKLM 336
>pir||E71193 probable operon protein Frv - Pyrococcus horikoshii
>gi|3258257|dbj|BAA30940.1| (AP000007) 354aa long
hypothetical operon protein Frv [Pyrococcus horikoshii]
Length = 354
Score = 187 bits (469), Expect = 2e-46
Identities = 126/339 (37%), Positives = 188/339 (55%), Gaps = 20/339 (5%)
Query: 7 LKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMDE 64
++E + PG+SGYE IR+ +++ +K+ AD KVD +GN+I R++ AHMD+
Sbjct: 15 MQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGSSPRIMVAAHMDK 74
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLG---KG 121
IG+++ I DG L +GG+ L + + TE GV+G +PPHL G KG
Sbjct: 75 IGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKG 134
Query: 122 KDVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVAL 180
I W ++V+D+GA SKEEA E+ + F +F+ LN +T LDDR + A+
Sbjct: 135 SK-IDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAM 193
Query: 181 IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGDV 239
IEA + L DH+ + +VQEE+GL+GAR + PE A+D +FA G +
Sbjct: 194 IEAARQLGDHE--ADIYIVGSVQEEVGLRGARVASYAINPEVGIAMDVTFAKQPHDKGKI 251
Query: 240 --KLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI--GVTGGGTDASVFQ---ER 292
+LG GPV+ N R A +V A+K +IP+Q+ GTDA+V Q E
Sbjct: 252 VPELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINREG 308
Query: 293 CKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
LS+PI+Y+HS+VE+ D++N IKL +A+ EL
Sbjct: 309 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 347
>pir||E71029 probable Frv operon protein FrvX - Pyrococcus horikoshii
>gi|3257954|dbj|BAA30637.1| (AP000006) 353aa long
hypothetical Frv operon protein FrvX [Pyrococcus
horikoshii]
Length = 353
Score = 185 bits (465), Expect = 6e-46
Identities = 125/335 (37%), Positives = 185/335 (54%), Gaps = 18/335 (5%)
Query: 5 EELKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIV-ELGEGDERLLFMAH 61
E LK+ + PG+SGYE IR+ +IEEIKD+ D KVD +GN+I + GEG +++ AH
Sbjct: 10 ELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGP-KVMIAAH 68
Query: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSV-VTEDKIIDGVIGAIPPHLSLGK 120
MD+IGL++T I +G LR +GG+D + L + V + + K I GV ++PPH+ +
Sbjct: 69 MDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPE 128
Query: 121 GKDVIP-WHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVV 178
+ P W ++ IDIGAESKEEA ++ VK + L + + DDR V
Sbjct: 129 DRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVY 188
Query: 179 ALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCN----- 233
++E K L D V F TVQEE+GL+GAR A P+Y FAID +
Sbjct: 189 TILEVAKQL--KDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAADIPGTP 246
Query: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQER 292
E LG G I+ +D S I + R + +A+K++IP Q+ + GGGTDA
Sbjct: 247 EHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAIHLT 306
Query: 293 CKAL---ALSVPIKYLHSEVEMLQINDLENLIKLI 324
+ ALSVP +Y+HS E++ D++ ++L+
Sbjct: 307 KAGVPTGALSVPARYIHSNTEVVDERDVDATVELM 341
>sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir||C64369 endoglucanase
homolog - Methanococcus jannaschii
>gi|1591260|gb|AAB98546.1| (U67504) endoglucanase (celM)
[Methanococcus jannaschii]
Length = 350
Score = 185 bits (464), Expect = 8e-46
Identities = 119/339 (35%), Positives = 191/339 (56%), Gaps = 15/339 (4%)
Query: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFM 59
M ++E LK+ +++ GISG E+ +RE + +E++ + D ++D GNLI + G ++++
Sbjct: 1 MSVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIA 60
Query: 60 AHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLG 119
AHMDEIGL++ I ++G L+F K+GGI D + + V V + GV+G+ PPH
Sbjct: 61 AHMDEIGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKE 120
Query: 120 KGK-DVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGV 177
+ K +I + ++ IDIGAES+EEA+E+ V + F L ++ ++ DDR G
Sbjct: 121 EEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRVGC 180
Query: 178 VALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-----SFACC 232
L+E +K L + D+ +V TVQEE+GLKGAR A + P+ A A+D
Sbjct: 181 AVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGI 240
Query: 233 NELTGDVKLGGGPVIRAVDNSA---IYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASV 288
+ V LG GPV+ VD S I + + +++EK KI +Q V GG TDA+
Sbjct: 241 KKEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATA 300
Query: 289 F---QERCKALALSVPIKYLHSEVEMLQINDLENLIKLI 324
+E +SVP +Y+H+ VE++ DLE ++L+
Sbjct: 301 IHLTREGIPTGVISVPARYIHTPVEVIDKRDLEKTVELV 339
>pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5457809|emb|CAB49299.1| (AJ248284)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 346
Score = 183 bits (459), Expect = 3e-45
Identities = 125/340 (36%), Positives = 190/340 (55%), Gaps = 22/340 (6%)
Query: 7 LKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMDE 64
++E + PG+SGYE IR+ +++ +K+ AD KVD +GN+I R++ AHMD+
Sbjct: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK---- 120
IG+++ I N+G L +GG+ L + + TE GV+G +PPHL G+
Sbjct: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
Query: 121 GKDVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179
GK I W ++V+D+GA +KEEA E+ K F +F+ L+ +T LDDR + A
Sbjct: 127 GK--IDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
Query: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGD 238
+IEA + L +H+ V +VQEE+GL+GAR + PE A+D +FA G
Sbjct: 185 MIEAARQLGEHE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGK 242
Query: 239 V--KLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI--GVTGGGTDASVFQ---E 291
+ +LG GPV+ N R A +V A+K +IP+Q+ GTDA+V Q E
Sbjct: 243 IVPELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINRE 299
Query: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
LS+PI+Y+HS+VE+ D++N IKL +A+ EL
Sbjct: 300 GVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
>pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subtilis
>gi|1770012|emb|CAA99585.1| (Z75208) hypothetical
protein [Bacillus subtilis] >gi|2635347|emb|CAB14842.1|
(Z99118) similar to endo-1,4-beta-glucanase [Bacillus
subtilis]
Length = 361
Score = 176 bits (443), Expect = 2e-43
Identities = 116/340 (34%), Positives = 185/340 (54%), Gaps = 15/340 (4%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVEL--GEGDERLLFMAHMD 63
LK+ T GI G E +R+ + I+ FAD D +G+LI + E +++ H+D
Sbjct: 11 LKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGHLD 70
Query: 64 EIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPH-LSLGKGK 122
E+G ++T IT+ G +RF+ VGG +++ + V++VT+ I GVIG+ PPH LS K
Sbjct: 71 EVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARK 130
Query: 123 DVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNG-RYVSTRSLDDRFGVVAL 180
+ ++ IDIGA S+EEALE V P D V F+V+N +++ ++ D+R G
Sbjct: 131 KSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIA 190
Query: 181 IEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-----SFACCNEL 235
I+ +++L + D V TVQEE+GL+GA+ A+ P+ AF +D +E
Sbjct: 191 IDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEK 250
Query: 236 TGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI-GVTGGGTDASVFQ---E 291
K+G GP I D S + + L V++ AE+ IP Q + GGGTD+
Sbjct: 251 EAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTAN 310
Query: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
AL++++ +Y+H+ ML +D EN +KLI + +L
Sbjct: 311 GVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350
>dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 361
Score = 173 bits (433), Expect = 3e-42
Identities = 117/343 (34%), Positives = 187/343 (54%), Gaps = 15/343 (4%)
Query: 4 IEELKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVE-LGEGD-ERLLFMA 60
++ LKE T GI G E R+ + + I+ FAD D +G+L+ + +G+ D +++
Sbjct: 8 LQMLKELTDANGIPGNEREARDVMRKHIEPFADEVTTDKLGSLVAKKVGKEDGPKIMVAG 67
Query: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
H+DEIG ++T I + G LRF+ VGG ++++ + V+V+T+ I GVIG+ PPH+ +
Sbjct: 68 HLDEIGFMVTSIDDKGFLRFQTVGGWWEQVMLAQRVTVMTKKGNIPGVIGSKPPHILPAE 127
Query: 121 G-KDVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVL-NGRYVSTRSLDDRFGV 177
K + ++ IDIG SKEEALE V+P D V F+V+ N +Y+ ++ D+R G
Sbjct: 128 ARKKPVDKKDMFIDIGVASKEEALEFGVRPGDSIVPVCDFTVMKNEKYLMAKAWDNRIGC 187
Query: 178 VALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-----SFACC 232
I+ +++L + V TVQEE+GL+GAR A+ P+ F +D
Sbjct: 188 AIAIDVLRELKGTNHPNVVYGVGTVQEEVGLRGARTSAHYIKPDIGFGVDVGIAGDTPGV 247
Query: 233 NELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI-GVTGGGTDASVFQ- 290
E K+G GP I D S + + L V IA+++ IP Q + GGGTD+
Sbjct: 248 TEKEALAKMGEGPQIVLYDASMVSHKGLRDFVTDIADEHNIPYQFDAMAGGGTDSGAIHL 307
Query: 291 --ERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
AL+++V +Y+HS +L +D EN +KLI + +L
Sbjct: 308 TANGVPALSITVATRYIHSHASILHRDDYENTVKLIVEVIKKL 350
>pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621502|gb|AAB84943.1| (AE000827)
endo-1,4-beta-glucanase [Methanobacterium
thermoautotrophicum]
Length = 343
Score = 169 bits (424), Expect = 4e-41
Identities = 121/340 (35%), Positives = 183/340 (53%), Gaps = 20/340 (5%)
Query: 1 MRIIEEL-KEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLI-VELGEGDERLL 57
M I++EL K + GISG+E +R+ I E++ D + D++GN+I V+ G G ++
Sbjct: 1 MVIMKELMKRLSVASGISGFEGEVRDIIRSELEGHVDEIEEDSLGNIIAVKRGSGPS-IM 59
Query: 58 FMAHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPH-L 116
AHMDEIGL++ I G +RF K+GGI D+++ + V + E+ + GVIG+ PPH +
Sbjct: 60 LAAHMDEIGLMVRHIDKKGFIRFSKIGGISDQMILNQAVWIHGENGPVMGVIGSKPPHRM 119
Query: 117 SLGKGKDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFG 176
+ K V + IDIGA S+E+A ELV D F +S L + ++LD+R G
Sbjct: 120 KASERKKVTTHDNMFIDIGASSREDAEELVAVGDPITFHAPYSELANSRFTGKALDNRIG 179
Query: 177 VVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-----SFAC 231
+ ++E +K + + G V TVQEE+GLKGA+ A R P+ A+D
Sbjct: 180 CLVMVEVLKRV---ETGATVYGVGTVQEEVGLKGAKTSAFRLNPDMTLALDVTIAGDHPG 236
Query: 232 CNELTGDVKLGGGPVIRAVDNSA---IYSRDLARKVLSIAEKNKIPIQIGVT-GGGTDAS 287
E KL GGP I D S I + +L A + IP+QI V+ GG TDA+
Sbjct: 237 MKEEEAPAKLEGGPAIILTDASGRGIITHPRVKDWLLETAREEDIPVQIEVSEGGTTDAT 296
Query: 288 VF---QERCKALALSVPIKYLHSEVEMLQINDLENLIKLI 324
+E A +SVP +Y+H+ V M + D+E + L+
Sbjct: 297 AIHLTREGIPAGVVSVPTRYIHTTVSMASMKDIEMTVDLL 336
>gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus maripaludis]
Length = 321
Score = 168 bits (421), Expect = 9e-41
Identities = 113/321 (35%), Positives = 177/321 (54%), Gaps = 15/321 (4%)
Query: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFM 59
M + LK GISG E+ IRE + +E++ + D + D GNLI + G +++
Sbjct: 1 MSTLNYLKILATEKGISGREDNIREYMKKELEKYCDSIETDKFGNLIAKKGSTGPKIMIA 60
Query: 60 AHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPH-LSL 118
+HMDEIGL++ I + G L+F K+GGI+D++L + V V + I GV+G+ PPH +
Sbjct: 61 SHMDEIGLMVKYIDDKGFLKFTKIGGINDQMLLNQKVIVHGNNGDIVGVLGSKPPHKMKE 120
Query: 119 GKGKDVIPWHELVIDIGAESKEEALELVKPLDFAV-FKKHFSVLNGRYVSTRSLDDRFGV 177
+ +I + IDIGA+++EEA ++ + A+ FK F L G VS +S D+R G
Sbjct: 121 SERNKLISAEHMFIDIGAKNREEAEKMGVEIGTAMSFKSEFDKLGGNVVSCKSFDNRAGC 180
Query: 178 VALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNE--- 234
+++ ++ L D DL +V TVQEE+G+KGA+ A P+ AFA+D C +
Sbjct: 181 AVVLKTMELLKDMDLKCQVYAVGTVQEEVGVKGAKTSAFGINPDVAFALDVTICGDHPGI 240
Query: 235 --LTGDVKLGGGPVIRAVDNSA---IYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASV 288
V+LG GPV VD S I + R V +++ ++IP+Q V GG TDA+
Sbjct: 241 KLEDAPVELGKGPVATIVDASGRGIITHPTVLRMVRDVSKADEIPVQYEVGEGGTTDATA 300
Query: 289 F---QERCKALALSVPIKYLH 306
++ +SVP +Y+H
Sbjct: 301 IHLTRDGIPTGVISVPSRYIH 321
>pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subtilis
>gi|2293210|gb|AAC00288.1| (AF008220) YtoP [Bacillus
subtilis] >gi|2635470|emb|CAB14964.1| (Z99119) similar
to endo-1,4-beta-glucanase [Bacillus subtilis]
Length = 357
Score = 167 bits (419), Expect = 1e-40
Identities = 108/333 (32%), Positives = 193/333 (57%), Gaps = 18/333 (5%)
Query: 11 TQIPGISGYEERIRERIIEEIKDFADYKV-DAIGNLI-VELGEGDE-RLLFMAHMDEIGL 67
TQ+PG G E ++R + +E+ +AD V D +G++ V G D R++ HMDE+G
Sbjct: 13 TQLPGAPGNEHQVRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGHMDEVGF 72
Query: 68 LITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKD-VIP 126
++T IT++G LRF+ +GG ++L + V + T++ + GVI +IPPHL ++ +
Sbjct: 73 MVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQRNRPMD 132
Query: 127 WHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVL-NGRYVSTRSLDDRFGVVALIEAI 184
++IDIGA+ KE+A+++ ++P V F+ + N + + +++ D+R+G IE +
Sbjct: 133 IKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGCGLSIELL 192
Query: 185 KDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGDV----K 240
K+L +L + TVQEE+GL+GA+ ++ P+ FA+D+ + N+++GD +
Sbjct: 193 KELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDA-SPANDMSGDKNEFGQ 251
Query: 241 LGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDAS---VFQERCKALA 297
LG G ++R +D + + R + VL +AE + IP Q V+GGGTDA + +
Sbjct: 252 LGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVSGGGTDAGKVHISNSGVPSAV 311
Query: 298 LSVPIKYLHSEVEMLQINDL----ENLIKLIEA 326
+ + +Y+H+ ++ I+D E LIKL+ A
Sbjct: 312 IGICSRYIHTNATIIHIDDYAAAKEMLIKLVTA 344
>pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981591|gb|AAD36126.1|AE001765_5 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 339
Score = 162 bits (405), Expect = 7e-39
Identities = 112/336 (33%), Positives = 171/336 (50%), Gaps = 19/336 (5%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLI-VELG-EGDERLLFMAHMD 63
LKE + +PG+SG E ++R+ I +I+ D D +GNLI ++ G + ++LL AHMD
Sbjct: 3 LKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRDSSKKLLVSAHMD 62
Query: 64 EIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKD 123
E+G +++ I DGK+ F VGG+D R+L G+ V V K + GVIG P HL +
Sbjct: 63 EVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQV----KNLKGVIGYRPIHLQRDEENT 118
Query: 124 VIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIEA 183
+ L ID G S +EA + V D+ F + NGR V ++ DDR G LI+
Sbjct: 119 PPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVG-KAFDDRAGCSVLIDV 177
Query: 184 IKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFAC-----CNELTGD 238
++ V F FTVQEE GL+G+ + + P A +++ E
Sbjct: 178 LESGVSP--AYDTYFVFTVQEETGLRGSAVVVEQLKPTCAIVVETTTAGDNPELEERKWA 235
Query: 239 VKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI-GVTGGGTDASVFQERC---K 294
LG GP I + +++ + ++ A+ N IP Q+ T GGTDA +
Sbjct: 236 THLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQMKRRTAGGTDAGRYARTAYGVP 295
Query: 295 ALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALE 330
A +S P +Y+HS ++ +ND EN KLI+ + E
Sbjct: 296 AGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEE 331
>pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981592|gb|AAD36127.1|AE001765_6 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 331
Score = 159 bits (397), Expect = 6e-38
Identities = 104/333 (31%), Positives = 180/333 (53%), Gaps = 23/333 (6%)
Query: 5 EELKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMD 63
E +++ T+ G SG EE +R I+EE++ D +++D +GNLIV G G+++++ AH+D
Sbjct: 3 ELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWKGSGEKKVILDAHID 62
Query: 64 EIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKD 123
EIG+++T + + G L VGG+ +L G+ + + +G IG + + +
Sbjct: 63 EIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRI------RFENGTIGVVGMEGETTEERQ 116
Query: 124 ----VIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179
+ + +L IDIGA S+EEA ++ F V+ F ++G+YVS +++DDR G
Sbjct: 117 ENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVS-KAMDDRIGCAV 175
Query: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTG-- 237
++E K + + F+VQEE+GL GA + A AID +
Sbjct: 176 IVEVFKRIKP---AVTLYGVFSVQEEVGLVGASVAGYGVPADEAIAIDVTDSADTPKAIK 232
Query: 238 --DVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQ---E 291
++L GGP ++ D ++I S+ + ++ IAEK I Q+ V T GGT+A +Q E
Sbjct: 233 RHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEVLTFGGTNAMGYQRTRE 292
Query: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLI 324
+ +S+P +Y+HS EM+ +D+E + L+
Sbjct: 293 GIPSATVSIPTRYVHSPSEMIAPDDVEATVDLL 325
>pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981590|gb|AAD36125.1|AE001765_4 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 334
Score = 149 bits (372), Expect = 5e-35
Identities = 107/335 (31%), Positives = 178/335 (52%), Gaps = 21/335 (6%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFADY-KVDAIGNLI-VELGEGDERLLFMAHMDE 64
L E + + G SGYE + I I+ F D K G+LI + G+G +L F AH+DE
Sbjct: 9 LMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGIGKLAFFAHVDE 68
Query: 65 IGLLITGITNDGKL-RFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKG-K 122
IG +++ + +G+ R VGG+D +++Y V + T++ I GVIG + PHL + K
Sbjct: 69 IGFVVSKV--EGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRK 126
Query: 123 DVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIE 182
V+ + E+ +D+ ++ V+ D AV + NG+ V ++LD+R L++
Sbjct: 127 KVLTYDEIFVDLSLCERD-----VRVGDIAVIDQTAFETNGKVVG-KALDNRASCGVLVK 180
Query: 183 AIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGDVKL 241
++ L +D V F+VQEE G GA A P+ A +D +FA + ++L
Sbjct: 181 VLEFLKRYDHPWDVYVVFSVQEETGCLGALTGAYEINPDAAIVMDVTFASEPPFSDHIEL 240
Query: 242 GGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGG--GTDASVFQ---ERCKAL 296
G GPVI + R+L +K++ IA+K+ + +Q GG GT+ Q +
Sbjct: 241 GKGPVIGL---GPVVDRNLVQKIIEIAKKHNVSLQEEAVGGRSGTETDFVQLVRNGVRTS 297
Query: 297 ALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
+S+P+KY+H+ VEM+ D+E L +L+ +A+EL
Sbjct: 298 LISIPLKYMHTPVEMVDPRDVEELARLLSLVAVEL 332
>dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 357
Score = 144 bits (360), Expect = 1e-33
Identities = 100/342 (29%), Positives = 177/342 (51%), Gaps = 19/342 (5%)
Query: 8 KEFTQIPGISGYEERIRERIIEEIKDFADYKV-DAIGNLI-VELG-EGDERLLFMAHMDE 64
K T++ G G+E IR + E++ + + V D +G++ V+ G E +++ HMDE
Sbjct: 10 KTLTELQGAPGFEHHIRRFVRGELEKYTNEIVQDRLGSIFGVKRGNEQGPKVMVAGHMDE 69
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPH-LSLGKGKD 123
+G ++T I G +RF+ +GG ++L + V ++T++ + GVIG+ PPH L + K
Sbjct: 70 VGFMVTSINEKGLIRFQTLGGWWSQVLLAQRVQIMTDEGPVIGVIGSTPPHLLEEAQRKK 129
Query: 124 VIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVL-NGRYVSTRSLDDRFGVVALI 181
+ + IDIGA+ KE+A ++ +KP V F+ L N + + ++ D+R+GV I
Sbjct: 130 PMDVKNMYIDIGADDKEDAQKIGIKPGQQIVPICPFTPLANEKKIMAKAWDNRYGVGLAI 189
Query: 182 EAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTGD--- 238
E +K+L + TVQEE+GL+GA A P+ +A+D+ + G
Sbjct: 190 ELLKELQGETTPNILYSGATVQEEVGLRGAATSAQMIEPDIFYALDASPANDATAGKDAF 249
Query: 239 VKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDAS---VFQERCKA 295
+LG G ++R D + + R + VL AE IP Q ++ GGTDA + +
Sbjct: 250 GQLGKGALVRIYDRTMVTHRGIRDFVLDTAETENIPYQFFISQGGTDAGRVHLSGNGVPS 309
Query: 296 LALSVPIKYLHSEVEMLQIND-------LENLIKLIEAIALE 330
+ + +Y+H+ ++ ++D L L+K + A+E
Sbjct: 310 AVIGICSRYIHTAASIIHVDDYAAAKALLVKLVKTTDKAAVE 351
>gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus]
>gi|7435574|pir||B69474 endoglucanase (celM) homolog -
Archaeoglobus fulgidus >gi|2648753|gb|AAB89455.1|
(AE000979) endoglucanase (celM) [Archaeoglobus fulgidus]
Length = 304
Score = 139 bits (348), Expect = 3e-32
Identities = 104/302 (34%), Positives = 159/302 (52%), Gaps = 28/302 (9%)
Query: 42 IGNLIVELGEGDERLLFMAHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTE 101
+GNLI G+ ++ AHMDEIG + I + G +R +GG ++ + V + +
Sbjct: 1 MGNLICTKNGGEPEIMVAAHMDEIGFAVKYIDDKGFIRIAPIGGWFSQIALAQRVVLYGK 60
Query: 102 DKIIDGVIGAIPPHLSLG-KGKDVIPWHELVIDIGAESKEEALELVKPL--DFAVFKKHF 158
K+ GVIG PPHL + K I ++ +DIGA SKEE LE+ + A+ ++
Sbjct: 61 KKVY-GVIGCKPPHLMKDEERKKGIEIKDMFVDIGASSKEEVLEMGINVGTPVALDREIV 119
Query: 159 SVLNGRYVSTRSLDDRFGVVALIEAIK----DLVDHDLGGKVVFAFTVQEEIGLKGARFL 214
+ NGR ++ ++ D+R GV +IEA++ D+ H + TVQEE+GLKGAR
Sbjct: 120 ELANGR-ITGKAFDNRVGVAVMIEAVRRAKADITIHAVA-------TVQEEVGLKGARTS 171
Query: 215 ANRYAPEYAFAIDS-----FACCNELTGDVKLGGGPVIRAVDNSA---IYSRDLARKVLS 266
A P A A+D+ F DVKLG G I +D S I S + R +
Sbjct: 172 AFAIEPTAAIAVDTCVAADFPGSESAHMDVKLGKGAAITVIDASGRGLIASPKVLRWLTE 231
Query: 267 IAEKNKIPIQIGVT-GGGTDASVF---QERCKALALSVPIKYLHSEVEMLQINDLENLIK 322
AEK IP Q+ V GG TDA+ + A +SVP +Y+HS VE++ + D+E+ ++
Sbjct: 232 TAEKYGIPYQLEVAEGGTTDATAIHLTKAGIPAGVVSVPARYIHSPVEVVDLKDVESAVE 291
Query: 323 LI 324
++
Sbjct: 292 IV 293
>pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasma urealyticum
>gi|6899252|gb|AAF30689.1|AE002124_11 (AE002124)
Endo-1,4-beta-glucanase [Ureaplasma urealyticum]
Length = 363
Score = 139 bits (348), Expect = 3e-32
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 19/333 (5%)
Query: 9 EFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGDE--RLLFMAHMDEI 65
E+ +I G+S +EER+ ++ +KD DY+ D +G++I + ++ ++L HMDE+
Sbjct: 15 EYMEIYGMSRHEERVASKLKASLKDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDEV 74
Query: 66 GLLITGITNDGKLRFRKVGGIDDRLLYGRHVSV-VTEDKIIDGVIGAIPPHLSLGKGKD- 123
G ++ I ++G+L VGG+ + G V V E + GV G H+ + +
Sbjct: 75 GFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILEPEARSK 134
Query: 124 VIPWHELVIDIGAESKEEALELVKPLDFAVFKKH--FSVLNGRYVSTRSLDDRFGVVALI 181
+P EL +D G SK++A++L + V+ + + + Y+ +++D+R V L
Sbjct: 135 AVPVKELFVDCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIVGKAVDNRVSVAVLD 194
Query: 182 EAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFAC-----CNELT 236
I L D + + FA TVQEE+GL+GA+ + ++ P+ ID+ C E
Sbjct: 195 LLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVIDTTTSHDTYKCPE-- 252
Query: 237 GDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVT-GGGTDASVFQ----E 291
GD KL G IR D + + L + +A K+ IP+ V GGGTDA Q
Sbjct: 253 GDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPLYKYVARGGGTDAEELQYGPNG 312
Query: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLI 324
+ LS+P +YLH+ + + + D++ L+
Sbjct: 313 GVLTIGLSIPQRYLHAPIGVATVKDIKAAFDLV 345
>sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA56994.1| (X81089)
glutamyl-aminopeptidase [Lactococcus lactis]
Length = 355
Score = 128 bits (319), Expect = 8e-29
Identities = 89/344 (25%), Positives = 164/344 (46%), Gaps = 13/344 (3%)
Query: 1 MRIIEELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELG---EGDERL 56
M + +++K T+I SG+E +R+ + + + + D +G + V E R+
Sbjct: 1 MELFDKVKALTEIQATSGFEGPVRDYLKARMVELGYQPEFDGLGGIFVTKASKVENAPRI 60
Query: 57 LFMAHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTED-KIIDGVIGAIPPH 115
+ AHMDE+G +++ I DG R +GG + ++ G+ ++ T K I V G +PPH
Sbjct: 61 MVAAHMDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPH 120
Query: 116 LSLGKG--KDVIPWHELVIDIGAESKEEALELVKPLDFAVFKKHFSVL--NGRYVSTRSL 171
L G G + +++ D E+ EA E + + ++L NG+ + +++
Sbjct: 121 LLRGTGVTPQIPAISDIIFDGAFENAAEAAEFGIAQGDLIIPETETILSANGKNIISKAW 180
Query: 172 DDRFGVVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFAC 231
D+R+G + ++E ++ L D +L ++ VQEE+GL+GA+ ++ P+ FA+D
Sbjct: 181 DNRYGCLMILELLEFLADKELPVTLIIGANVQEEVGLRGAKVSTTKFNPDLFFAVDCSPA 240
Query: 232 CNELTGD-VKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDAS--- 287
+ D +LG G +R D I + +L A K+ Q+ + GGTDA
Sbjct: 241 SDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLDTANHAKVKTQVYMAKGGTDAGAAH 300
Query: 288 VFQERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
+ + + V +Y+HS + I+D + AI L
Sbjct: 301 LANGGVPSTTIGVVARYIHSHQTIFNIDDFLQAQTFLRAIITSL 344
>sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108|pir||S40842 probable
frv operon protein FrvX - Escherichia coli
>gi|305002|gb|AAB03031.1| (L19201) ORF_f356 [Escherichia
coli] >gi|1790332|gb|AAC76880.1| (AE000465) frv operon
protein [Escherichia coli K12]
Length = 356
Score = 127 bits (316), Expect = 2e-28
Identities = 95/343 (27%), Positives = 169/343 (48%), Gaps = 19/343 (5%)
Query: 4 IEELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGDERLLFMAHM 62
IE L++ + +SG E+ +R+ +I ++ + D +G+ + G ++ + HM
Sbjct: 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVGHM 62
Query: 63 DEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKI-IDGVIGAIPPHLSLGKG 121
DE+G ++T I G LRF +GG ++ + V++ T + I GVIG++ PH K
Sbjct: 63 DEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQ 122
Query: 122 K-DVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179
K + + E+ IDIGA S+EE + V+ +F + +F+ V ++LD+R G
Sbjct: 123 KQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCAM 182
Query: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELTG-- 237
+ E ++ + + ++ + +V+EE+GL+GA+ A P+ +D+ A ++ G
Sbjct: 183 MAELLQTVNNPEI--TLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDT-AVAGDVPGID 239
Query: 238 ----DVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI-----GVTGGGTDASV 288
+KLG GP + D ++ L + S A N +P+Q G T GG +V
Sbjct: 240 NIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQFSTMKTGATDGGR-YNV 298
Query: 289 FQERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
+AL +P +YLH+ M+ D E L+ LI L
Sbjct: 299 MGGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTL 341
>gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp. NRC-1]
Length = 353
Score = 111 bits (276), Expect = 9e-24
Identities = 94/334 (28%), Positives = 140/334 (41%), Gaps = 14/334 (4%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMDEI 65
L E + +G+E + +E + +AD + DA GN + G + F H DEI
Sbjct: 9 LDELLAVHSPTGHEAAAQRVWVEYVSQYADRVETDAYGNAVAVAEGGAPAVAFTGHADEI 68
Query: 66 GLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKDVI 125
G + IT G +R +GG+D + G V + T+D ++GVIG HL
Sbjct: 69 GFAVAEITEGGFVRIAPIGGLDASVTRGSQVRIETDDGPVNGVIGQAAVHLRDHSEDGAA 128
Query: 126 P-WHELVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIEAI 184
P E +DIGA ++A + V D V L G ++ RSLD+R G+ E
Sbjct: 129 PSVTEQYVDIGAADGDDARDRVSVGDPGVLVSEPRELAGGRLNARSLDNRTGLWVAAEGF 188
Query: 185 KDLVDHDLGGKVVFAFTVQEEIGLKGARFLA------NRYAPEYAFAIDSFACCNELTGD 238
+ V+ D+ V TV EEIG +GAR + A + A D E
Sbjct: 189 RRAVERDVDATVYAVSTVHEEIGTRGARMVGFDLDVDAVVAADVTHAADDPMYPAERAST 248
Query: 239 VKLGGGPVI-RAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDASVFQER---CK 294
V LG GPV+ R N + L ++ T GTDA F
Sbjct: 249 VALGDGPVVMRGGTNHPVVVSALRDAAADAGASLQVAAHRIST--GTDADAFGTAGGGVP 306
Query: 295 ALALSVPIKYLHSEVEMLQINDLENLIKLIEAIA 328
L +P +Y+H+ E++ + DL ++ A A
Sbjct: 307 TADLGIPNRYMHTPAEVVDLADLAAGADVLAAFA 340
>sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|7435572|pir||C65244
hypothetical 41.7 kD protein in fecI-fimB intergenic
region - Escherichia coli (strain K-12)
>gi|2367373|gb|AAC77261.1| (AE000501) putative
lyase/synthase [Escherichia coli K12]
Length = 383
Score = 109 bits (269), Expect = 6e-23
Identities = 96/345 (27%), Positives = 156/345 (44%), Gaps = 21/345 (6%)
Query: 5 EELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGDE---RLLFMA 60
E L Q ISG+E + + ++ E + A + D +GN++ G RL+ A
Sbjct: 17 ETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFA 76
Query: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
HMDE+G ++ I G LRF +VGG + G V++ + + G IG H + G
Sbjct: 77 HMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGD 136
Query: 121 GKDVIP-WHELVIDIGAESKEEALELVKPLDFAV-FKKHFSVLNGRYVSTRSLDDRFGVV 178
+ P +L IDIGA+ K++A+ + + V +L V +++LDDR G
Sbjct: 137 ERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCT 196
Query: 179 ALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELT-- 236
AL+ + +L V +VQEE ++G + R P+ A ID C+
Sbjct: 197 ALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLH 256
Query: 237 --GDVKLGGGPVI-------RAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDAS 287
+V++ G I R I L R + A ++ IP+Q V G +
Sbjct: 257 DYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITET 316
Query: 288 ----VFQERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIA 328
V Q+ +LS+P +Y HS E+ + DL + I+L+ A+A
Sbjct: 317 GYIQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALA 361
>pir||E75542 probable endoglucanase - Deinococcus radiodurans (strain R1)
>gi|6457903|gb|AAF09817.1|AE001885_1 (AE001885)
endoglucanase, putative [Deinococcus radiodurans]
Length = 375
Score = 108 bits (267), Expect = 1e-22
Identities = 89/320 (27%), Positives = 155/320 (47%), Gaps = 12/320 (3%)
Query: 17 SGYEERIRERIIEEIKDFADYKVDAIGNLIVELG-EGDERLLFMAHMDEIGLLITGITND 75
SG E R + +E FA D G++ ELG E + M H+DEIGL+++ + +
Sbjct: 45 SGAERRAADVWKKEAATFARVSEDHYGSVYAELGPENGPAIALMGHLDEIGLIVSHVDDK 104
Query: 76 GKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGKGKD-VIPWHELVIDI 134
G L VGG D ++L G+ + ++ + GV+G H+ + + +L ID+
Sbjct: 105 GHLSVLGVGGWDPQVLVGQRIRLLAPGGDLLGVVGKKAIHVMEAEERTKASKLEDLWIDV 164
Query: 135 GAESKEEALELVKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIEAIKDLVDHDLGG 194
G ++ E ++ P+ + V+ G V +R+LD+R G ++EA++ L D +L
Sbjct: 165 GLDADEVKAKV--PVGTYGVIEQGPVMVGNKVVSRALDNRVGAFIVLEALRALKDVELKH 222
Query: 195 KVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGDVKLGGGPVIRAVDNS 253
++V T QEEIG+ GA+ A R P A+D + + K G P + S
Sbjct: 223 RIVAVGTSQEEIGVFGAQTSAYRLDPVAGIAVDVTHETDQPGVSEKKYGVAPFGSGANLS 282
Query: 254 A--IYSRDLARKVLSIAEKNKIPIQIGVTG--GGTDA---SVFQERCKALALSVPIKYLH 306
+ + L R++ A + IP + +G GTDA ++ + +S+P +Y+H
Sbjct: 283 VGPMTNPTLLRQLTEAAGRENIPYTLSASGRYTGTDADALTLVRAGVPTGVVSIPNRYMH 342
Query: 307 SEVEMLQINDLENLIKLIEA 326
S EM+ D++ I ++ A
Sbjct: 343 SPSEMVDERDVKACIDILAA 362
>pir||S56530 hypothetical protein f383 - Escherichia coli
>gi|537146|gb|AAA97201.1| (U14003) ORF_f383 [Escherichia
coli]
Length = 383
Score = 106 bits (263), Expect = 3e-22
Identities = 95/345 (27%), Positives = 155/345 (44%), Gaps = 21/345 (6%)
Query: 5 EELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGDE---RLLFMA 60
E L Q ISG+E + + ++ E + A + D +GN++ G RL+ A
Sbjct: 17 ETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFA 76
Query: 61 HMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK 120
HMDE+G ++ I G LRF +VGG + G V++ + + G IG H +
Sbjct: 77 HMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKAD 136
Query: 121 GKDVIP-WHELVIDIGAESKEEALELVKPLDFAV-FKKHFSVLNGRYVSTRSLDDRFGVV 178
+ P +L IDIGA+ K++A+ + + V +L V +++LDDR G
Sbjct: 137 ERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCT 196
Query: 179 ALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNELT-- 236
AL+ + +L V +VQEE ++G + R P+ A ID C+
Sbjct: 197 ALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLH 256
Query: 237 --GDVKLGGGPVI-------RAVDNSAIYSRDLARKVLSIAEKNKIPIQIGVTGGGTDAS 287
+V++ G I R I L R + A ++ IP+Q V G +
Sbjct: 257 DYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITET 316
Query: 288 ----VFQERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIA 328
V Q+ +LS+P +Y HS E+ + DL + I+L+ A+A
Sbjct: 317 GYIQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALA 361
>pir||E65012 hypothetical protein b2384 - Escherichia coli (strain K-12)
>gi|1788727|gb|AAC75443.1| (AE000326) orf, hypothetical
protein [Escherichia coli K12]
>gi|1799795|dbj|BAA16254.1| (D90868) PUTATIVE FRV OPERON
PROTEIN FRVX. [Escherichia coli]
Length = 345
Score = 104 bits (256), Expect = 2e-21
Identities = 80/338 (23%), Positives = 158/338 (46%), Gaps = 23/338 (6%)
Query: 7 LKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELGEGD-ERLLFMAHMDE 64
LK ++ I+ E+ +R+ ++EE + + D +G++++ L E +++ AHMDE
Sbjct: 6 LKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMICAHMDE 65
Query: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKI-IDGVIGAIPPHLSLGKGKD 123
+G ++ I+ +G + VG + + V + T ++ I G++ +G D
Sbjct: 66 VGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDR------QGND 119
Query: 124 VIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVALIE 182
V + +DIGA S +E ++ ++P D F F VL + V ++ DDR G L+
Sbjct: 120 V---SAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVT 176
Query: 183 AIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFACCNE-----LTG 237
+++L D +L +V + EE+GL+G + +P+ A +D+ AC +
Sbjct: 177 LLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDT-ACWAKNFDYGAAN 235
Query: 238 DVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV-TGGGTDASVFQ---ERC 293
++G GP++ D S I L V ++A + +P+Q + + GGTD
Sbjct: 236 HRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGV 295
Query: 294 KALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
+ + ++ H + D+ + +L+ A+ L
Sbjct: 296 PTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRL 333
>pir||B71121 hypothetical protein PH0737 - Pyrococcus horikoshii
>gi|3257145|dbj|BAA29828.1| (AP000003) 336aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 336
Score = 83.1 bits (202), Expect = 4e-15
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 16/286 (5%)
Query: 2 RIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMAH 61
RI++ L+E +IP +GY + + + + +K+ ++ L+ +AH
Sbjct: 3 RIVKILREILEIPSPTGYTKEVMSYLEKFLKENEVNFYYTNKGALIAGNHPKPELVVIAH 62
Query: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVT-EDKIIDGVIGAIPP--HLSL 118
+D +G ++ I DG L F ++GG+ G + +++T + K G + P H++
Sbjct: 63 VDTLGAMVKEILPDGHLAFSRIGGLVLPTFEGEYCTIITRKGKKFRGTLLLRNPSAHVNR 122
Query: 119 GKGKDVIPWHELVI--DIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRF 175
GK + I D E +E+ +L ++P DF F F +NG +V + LDD+
Sbjct: 123 EVGKKERKEENMYIRLDELVEKREDTEKLGIRPGDFIAFDPKFEYVNG-FVKSHFLDDKA 181
Query: 176 GVVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAP--EYAFAIDSFACCN 233
V A+++ I D+ D V F F+ EE+G G+ Y P + +D
Sbjct: 182 SVAAILDLIIDMKDELEKYPVAFFFSPYEEVGHGGSA----GYPPTTKELLVVDMGVVGE 237
Query: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV 279
++G I A D + Y D+ +++ +AE+N IP + V
Sbjct: 238 GVSGKET---AVSIAAKDTTGPYDYDMTNRLIELAEENNIPYVVDV 280
>pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyrococcus abyssi
(strain Orsay) >gi|5458733|emb|CAB50220.1| (AJ248287)
similar to glucanase [Pyrococcus abyssi]
Length = 335
Score = 79.6 bits (193), Expect = 5e-14
Identities = 70/286 (24%), Positives = 129/286 (44%), Gaps = 16/286 (5%)
Query: 2 RIIEELKEFTQIPGISGYEERIRERIIEEIKDFADYKVDAIGNLIVELGEGDERLLFMAH 61
R+++ LKE +IP +GY + I + +K+ +V + +L+ +AH
Sbjct: 3 RVVKILKEILEIPSPTGYMKEIMPYLESFLKENNVKFYYTNKGALVAGNHREPKLVVIAH 62
Query: 62 MDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVT-EDKIIDGVIGAIPP--HLSL 118
+D +G ++ I +G L F ++GG+ G + +++T K G + P H++
Sbjct: 63 VDTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNK 122
Query: 119 GKGKDVIPWHELVI--DIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRF 175
GK + I D E KE+ +L ++P D+ F F +NG ++ + LDD+
Sbjct: 123 DAGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYING-FIKSHFLDDKA 181
Query: 176 GVVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAP--EYAFAIDSFACCN 233
V +++ I D+ + V F F+ EE+G G+ Y P +D
Sbjct: 182 SVAVILDLIADMGEELEKYPVAFFFSPYEEVGHGGSA----GYPPSARELLVVDMGVVGE 237
Query: 234 ELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQIGV 279
++G I A D + Y D+ +++ +AE+N IP + V
Sbjct: 238 GVSGKET---AVSIAAKDTTTPYDYDMTTRLIELAEQNNIPYVVDV 280
>pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis
>gi|1523802|emb|CAA66983.1| (X98339) glucanase [Anabaena
variabilis]
Length = 346
Score = 73.7 bits (178), Expect = 3e-12
Identities = 76/339 (22%), Positives = 147/339 (42%), Gaps = 20/339 (5%)
Query: 3 IIEELKEFTQIPGISGYEERIRERIIEEIKDFA-DYKVDAIGNLIVELG--EGDERLLFM 59
+ E ++E SG E I + ++++ + D N+I ++ D +
Sbjct: 7 LFENIEELVMHHSPSGAETEINQLLLQKFAALGVEVWSDRADNIIAKIPGKNSDIAVAIT 66
Query: 60 AHMDEIGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLG 119
AH DEIG ++ I + GK+ RK+GG + V ++ +++ I G++ H+S
Sbjct: 67 AHKDEIGAIVKNIGDAGKVEVRKLGGAYPWVYGEGVVDLLGDNETISGILSFGSRHVSHE 126
Query: 120 KGKDV------IPWHELVIDIGAESKEEALELVKPLDFAVFKKHFS--VLNGRYVSTRSL 171
+ V + W I+ ++E ++P V KH V ++++ +L
Sbjct: 127 SPQKVQQEDTAVKWENAWIETKRTTEELEAAGIRPGTRMVIGKHRKRPVRLQDHIASYTL 186
Query: 172 DDRFGVVALIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAIDSFAC 231
D++ V L+ ++ L + V + +EE+G GA F + A++
Sbjct: 187 DNKASVAILLALVQQLKQPAI--DVYLVASAKEEVGAIGALFFTQNQQLDALIALEICPL 244
Query: 232 CNELTGDVKLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI-GVTGGGTDASV-- 288
E VK PV+ D IY L ++ A++ + +Q+ ++G G+DAS+
Sbjct: 245 SEEY--PVKDSENPVLLVQDAYGIYDEGLNGELRQCAKQLNMSVQLTTLSGFGSDASIAM 302
Query: 289 -FQERCKALALSVPIKYLHSEVEMLQINDLENLIKLIEA 326
F +A L+ P + H E+ + + N I L++A
Sbjct: 303 KFGHVGRAACLAFPTQNTHG-YEIAHLGAISNCINLLKA 340
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.143 0.404
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118866159
Number of Sequences: 2977
Number of extensions: 5064796
Number of successful extensions: 11502
Number of sequences better than 1.0e-10: 32
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 11368
Number of HSP's gapped (non-prelim): 32
length of query: 331
length of database: 189,106,746
effective HSP length: 55
effective length of query: 276
effective length of database: 156,189,961
effective search space: 43108429236
effective search space used: 43108429236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)