BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2378 (atpA) DE:H+-transporting ATP synthase, subunit Alpha
(atpA)
(1017 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75028 h+-transporting ATP synthase, chain alpha (atpa) PAB... 2036 0.0
pir||G71213 probable H(+)-transporting ATP synthase subunit A - ... 1632 0.0
pir||T44309 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 662 0.0
pir||JC5532 vacuolar-type ATPase (EC 3.-.-.-) A chain - Desulfur... 659 0.0
pir||T44674 H+-transporting ATP synthase, chain A [imported] - D... 659 0.0
sp|Q57670|ATPA_METJA ATP SYNTHASE ALPHA CHAIN >gi|2118218|pir||B... 516 e-145
pir||G69227 ATP synthase, subunit A - Methanobacterium thermoaut... 510 e-143
emb|CAC11153.1| (AL445063) probable ATP synthase, subunit A (int... 501 e-140
dbj|BAB00608.1| (AB045977) A-ATPase A-subunit [Thermoplasma acid... 490 e-137
gi|11498766 H+-transporting ATP synthase, subunit A (atpA) [Arch... 479 e-134
sp|Q60186|ATPA_METMA ATP SYNTHASE ALPHA CHAIN (ATPASE SUBUNIT A)... 454 e-126
sp|P22662|ATPA_METBA ATP SYNTHASE ALPHA CHAIN >gi|80984|pir||A34... 452 e-126
pir||E72733 probable membrane-associated ATPase alpha chain APE0... 446 e-124
sp|Q48332|ATPA_HALVO ATP SYNTHASE ALPHA CHAIN >gi|629402|pir||S4... 446 e-124
sp|P09639|ATPA_SULAC MEMBRANE-ASSOCIATED ATP SYNTHASE ALPHA CHAI... 440 e-122
pir||A56812 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 438 e-121
sp|Q08636|NTPA_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT A (NA(+)... 437 e-121
gb|AAG20277.1| (AE005102) H+-transporting ATP synthase subunit A... 432 e-119
sp|P25163|ATPA_HALSA ATP SYNTHASE ALPHA CHAIN >gi|81070|pir||S14... 431 e-119
emb|CAB57737.1| (Y18930) atpase alpha chain (membrane-associated... 417 e-115
gb|AAK40879.1| ATP synthase subunit A (atpA) [Sulfolobus solfata... 417 e-115
pir||C71313 probable V-type ATPase, subunit A (atpA-2) - syphili... 416 e-115
pir||A75488 v-type ATP synthase, A subunit - Deinococcus radiodu... 412 e-113
gb|AAF53231.1| (AE003638) CG3762 gene product [alt 1] [Drosophil... 372 e-101
gb|AAB02270.1| (U59146) vacuolar ATPase subunit A [Drosophila me... 371 e-101
gi|4502307 ATPase, H+ transporting, lysosomal (vacuolar proton p... 369 e-101
sp|O23654|VATA_ARATH VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 368 e-100
dbj|BAA87891.1| (AB004247) H+-ATPase catalytic subunit [Citrus u... 368 e-100
sp|P09469|VATA_DAUCA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 367 e-100
sp|P31400|VATA_MANSE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 367 e-100
sp|Q39291|VATA_BRANA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 367 e-100
dbj|BAB18682.1| (AB032840) vacuolar proton-ATPase [Hordeum vulgare] 366 e-100
sp|Q40002|VATA_HORVU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 366 e-100
gb|AAA61761.2| (U19745) V-ATPase A subunit [Drosophila melanogas... 366 e-100
sp|P49087|VATA_MAIZE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 366 e-100
sp|Q38676|VAA1_ACEAT VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A I... 365 1e-99
sp|P31405|VATA_GOSHI VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 364 3e-99
gb|AAC17840.1| (AF050673) vacuolar H+-ATPase catalytic subunit [... 364 3e-99
sp|P13548|VATA_PHAAU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 363 4e-99
sp|P48602|VATA_DROME VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 363 5e-99
sp|Q26975|VATA_TRYCO VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 363 7e-99
pir||T27035 hypothetical protein Y49A3A.2 - Caenorhabditis elega... 361 3e-98
gb|AAF53234.1| (AE003638) CG5075 gene product [Drosophila melano... 360 6e-98
gi|6680752 ATPase, H+ transporting, lysosomal (vacuolar proton p... 359 8e-98
sp|Q39442|VATA_BETVU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 359 8e-98
sp|O16109|VATA_AEDAE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 359 1e-97
dbj|BAA36691.1| (AB016483) vacuolar-type H+-ATPase subunit A [As... 359 1e-97
gb|AAB50981.1| (U49169) vacuolar H+-ATPase A subunit [Dictyostel... 358 1e-97
pir||S19659 H+-transporting ATPase (EC 3.6.1.35) chain A, vacuol... 358 2e-97
sp|Q03498|VATA_PLAFA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 358 2e-97
sp|P31404|VATA_BOVIN VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A, ... 358 2e-97
prf||1902186A vacuolar H ATPase:SUBUNIT=70kD [Bos taurus] 358 2e-97
sp|Q38677|VAA2_ACEAT VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A I... 358 2e-97
gb|AAA21531.1| (U04849) putative vacuolar proton-transporting AT... 356 5e-97
gi|4502305 ATPase, H+ transporting, lysosomal (vacuolar proton p... 356 7e-97
pir||B46091 H+-transporting ATPase (EC 3.6.1.35) chain A, vacuol... 356 7e-97
gb|AAF14870.1|AF113129_1 (AF113129) vacuolar ATPase isoform VA68... 356 7e-97
gi|11434143 ATPase, H+ transporting, lysosomal (vacuolar proton ... 356 7e-97
sp|P48414|VATA_CYACA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 355 2e-96
emb|CAB55557.1| (AJ131823) H(+)-transporting ATP synthase [Scher... 354 3e-96
pir||I50716 A1 isoform of vacuolar H+-ATPase subunit A - chicken... 353 5e-96
sp|P11592|VATA_NEUCR VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 351 2e-95
sp|P31406|VATA_SCHPO VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 351 2e-95
sp|Q29048|VATA_PIG VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-... 351 3e-95
emb|CAB51771.1| (AJ009881) vacuolar ATPase subunit a [Eremotheci... 348 2e-94
emb|CAA98761.1| (Z74233) ORF YDL184w-b [Saccharomyces cerevisiae] 345 2e-93
pir||I50715 A2 isoform of vacuolar H+-ATPase subunit A - chicken... 344 4e-93
sp|P38078|VATA_CANTR VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A [... 330 4e-89
dbj|BAA89598.1| (AB036926) vacuolar H+-ATPase A subunit [Citrus ... 328 1e-88
gi|6320016 vacuolar ATPase V1 domain subunit A (69 kDa); Tfp1p [... 328 2e-88
gb|AAB63978.1| (M21609) transmembrane ATPase-like protein [Sacch... 325 1e-87
pir||S18887 H+-transporting ATPase (EC 3.6.1.35) catalytic chain... 307 4e-82
gb|AAB40515.1| (U18938) vacuolar-ATPase catalytic subunit-A [Gia... 298 2e-79
pir||B72121 ATP synthase, chain A CP0686 [imported] - Chlamydoph... 284 3e-75
pir||E81687 ATP synthase, chain A TC0582 [imported] - Chlamydia ... 275 1e-72
pir||B71531 probable ATP synthase chain A - Chlamydia trachomati... 275 2e-72
pir||F70111 V-type ATPase, subunit A (atpA) homolog - Lyme disea... 262 1e-68
pir||S18313 Na+-transporting ATPase (EC 3.6.1.-) alpha chain - E... 259 1e-67
pir||G71325 probable V-type ATPase, subunit A (atpA-1) - syphili... 254 3e-66
emb|CAA71931.1| (Y11038) BV-70/5 [Beta vulgaris] 252 1e-65
pir||S13589 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 250 4e-65
gb|AAA79992.1| (U36438) V-ATPase 66 kDa subunit [Acer pseudoplat... 250 7e-65
emb|CAA44922.1| (X63285) 73 kDa subunit of Na+-ATPase [Enterococ... 240 8e-62
emb|CAA54241.1| (X76913) v-type Na-ATPase [Enterococcus hirae] 188 3e-46
gb|AAF18994.1|AF212304_1 (AF212304) vacuolar H+-ATPase catalytic... 183 6e-45
dbj|BAA94379.1| (AB033377) vacuolar H+-ATPase subunit A [Nepenth... 171 5e-41
pir||E64477 replication factor C homolog - Methanococcus jannasc... 151 3e-35
pir||S65525 H+-transporting ATPase (EC 3.6.1.35), vacuolar chain... 132 1e-29
sp|P54647|VATA_DICDI VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (... 130 7e-29
gb|AAF24768.1|AF218356_1 (AF218356) vacuolar H+-ATPase catalytic... 119 2e-25
sp|P42466|ATPB_HERAU ATP SYNTHASE BETA CHAIN >gi|560837|emb|CAA5... 116 1e-24
pir||F71231 probable replication factor C subunit - Pyrococcus h... 116 1e-24
gb|AAF22498.1|AF098522_8 (AF098522) F1F0-ATPase subunit beta [La... 113 1e-23
pir||D72404 flagellum-specific ATP synthase - Thermotoga maritim... 112 2e-23
sp|Q03234|ATPB_LACCA ATP SYNTHASE BETA CHAIN >gi|421578|pir||S30... 111 4e-23
gb|AAF02210.1| (AF059739) H+-ATPase cytoplasmic F1-part beta-sub... 109 1e-22
sp|P43451|ATPB_ENTHR ATP SYNTHASE BETA CHAIN >gi|153573|gb|AAA26... 109 2e-22
pir||H82928 ATP synthase beta chain UU129 [imported] - Ureaplasm... 107 6e-22
gb|AAD16426.1| (AF101055) ATP synthase subunit beta [Clostridium... 107 8e-22
pir||C75198 activator 1, replication factor c, small chain PAB00... 107 8e-22
gb|AAD00918.1| (AF001955) proton-translocating ATPase beta subun... 106 1e-21
sp|P42470|ATPB_WOLSU ATP SYNTHASE BETA CHAIN >gi|587588|emb|CAA5... 106 2e-21
sp|P52607|FLII_BORBU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436104... 106 2e-21
gi|11498767 H+-transporting ATP synthase, subunit B (atpB) [Arch... 106 2e-21
sp|P33253|ATPB_MYCGA ATP SYNTHASE BETA CHAIN >gi|282594|pir||S24... 105 3e-21
sp|O83417|FLII_TREPA FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436100... 105 3e-21
gb|AAD15915.1| (AF069392) polar flagellum-specific ATP synthase ... 105 3e-21
sp|P12698|ATPB_BACME ATP SYNTHASE BETA CHAIN >gi|67849|pir||PWBS... 104 4e-21
sp|P42469|ATPB_STIAU ATP SYNTHASE BETA CHAIN >gi|587526|emb|CAA5... 104 4e-21
pir||A83435 ATP synthase in type III secretion system PA1697 [im... 104 7e-21
sp|Q48333|ATPB_HALVO ATP SYNTHASE BETA CHAIN >gi|629403|pir||S45... 103 9e-21
dbj|BAB07473.1| (AP001519) ATP synthase beta subunit [Bacillus h... 103 9e-21
gb|AAB51413.1| (L76303) flagellar export apparatus [Borrelia bur... 103 1e-20
gb|AAB86534.1| (AF010151) PscN [Pseudomonas aeruginosa] 103 1e-20
pir||C81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector... 103 1e-20
gb|AAF64075.1|AF147781_1 (AF147781) ATP synthase beta subunit [B... 103 1e-20
sp|P22478|ATPB_BACFI ATP SYNTHASE BETA CHAIN >gi|80091|pir||S177... 102 1e-20
pir||A71486 probable yop N (flagellar-type ATPase) - Chlamydia t... 102 1e-20
gb|AAC38612.1| (AF049488) BscN [Bordetella bronchiseptica] 102 2e-20
sp|P95789|ATPB_STRMU ATP SYNTHASE BETA CHAIN >gi|4239652|gb|AAD1... 102 2e-20
prf||1211283A ATPase beta F1 [thermophilic bacterium PS3] 101 3e-20
sp|P41009|ATPB_BACCA ATP SYNTHASE BETA CHAIN >gi|533290|dbj|BAA0... 101 3e-20
pir||T10475 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 101 3e-20
sp|P42467|ATPB_PEPNI ATP SYNTHASE BETA CHAIN 101 3e-20
sp|P12986|ATPB_VIBAL ATP SYNTHASE BETA CHAIN >gi|79235|pir||S060... 101 4e-20
sp|Q50331|ATPB_MYCPN ATP SYNTHASE BETA CHAIN >gi|2127619|pir||S6... 101 4e-20
pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1... 101 4e-20
gi|11467760 CF1 beta subunit of ATP synthase [Nephroselmis oliva... 100 8e-20
sp|P42006|ATPB_BACST ATP SYNTHASE BETA CHAIN >gi|534854|dbj|BAA0... 100 1e-19
sp|P25075|ATPX_BACFI ATP SYNTHASE BETA CHAIN >gi|67850|pir||PWBS... 100 1e-19
gi|11467696 ATP synthase CF1 subunit b [Guillardia theta] >gi|59... 100 1e-19
pir||B82114 flagellum-specific ATP synthase FliI VC2130 [importe... 100 1e-19
pir||F82036 ATP synthase F1, beta chain VC2764 [imported] - Vibr... 100 1e-19
gi|11467034 ATP Synthase, beta subunit [Euglena gracilis] >gi|39... 99 2e-19
gi|10955560 ATPase YscN [Yersinia enterocolitica] >gi|732261|sp|... 99 2e-19
pir||B64244 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 99 2e-19
sp|P47639|ATPB_MYCGE ATP SYNTHASE BETA CHAIN >gi|3844991|gb|AAC7... 99 2e-19
gi|10955631 Yops secretion ATPase YscN homolog [Yersinia pestis]... 99 2e-19
sp|P07677|ATPB_BACP3 ATP SYNTHASE BETA CHAIN >gi|77453|pir||A255... 99 2e-19
sp|Q03235|ATPB_PECFR ATP SYNTHASE BETA CHAIN >gi|421322|pir||S30... 99 3e-19
sp|P37809|ATPB_BACSU ATP SYNTHASE BETA CHAIN (VEGETATIVE PROTEIN... 99 3e-19
gi|6322581 F(1)F(0)-ATPase complex beta subunit, mitochondrial; ... 99 3e-19
dbj|BAA23688.1| (AB006151) proton-translocating ATPase, beta sub... 99 3e-19
sp|Q57669|ATPB_METJA ATP SYNTHASE BETA CHAIN >gi|2118192|pir||A6... 98 5e-19
gb|AAB61298.1| (AF004014) F1F0-ATPase beta subunit [Helicobacter... 98 5e-19
sp|P55988|ATPB_HELPY ATP SYNTHASE BETA CHAIN >gi|7436090|pir||D6... 98 5e-19
sp|Q9ZK81|ATPB_HELPJ ATP SYNTHASE BETA CHAIN >gi|7436085|pir||D7... 98 5e-19
gb|AAF49540.1| (AE003528) CG5389 gene product [Drosophila melano... 98 5e-19
sp|P30399|ATPB_CUSRE ATP SYNTHASE BETA CHAIN >gi|82303|pir||S204... 98 7e-19
dbj|BAA12667.1| (D84449) proton ATPase beta subunit [Desulfovibr... 98 7e-19
gb|AAB51731.1| (U93823) ATP synthase beta chain [Tmesipteris tan... 98 7e-19
gb|AAD50871.1| (AF168929) ATP synthase beta subunit [Mayaca aubl... 98 7e-19
emb|CAB89960.1| (AJ235571) ATP synthase beta subunit [Prostanthe... 98 7e-19
sp|Q05373|ATPB_SYNP1 ATP SYNTHASE BETA CHAIN >gi|480499|pir||S36... 97 9e-19
prf||1508208B ATPase beta [Enterobacter aerogenes] 97 9e-19
gi|11467561 ATP synthase CF1 subunit beta [Odontella sinensis] >... 97 9e-19
sp|P50002|ATPB_ACEWO ATP SYNTHASE BETA CHAIN, SODIUM ION SPECIFI... 97 9e-19
sp|O03069|ATPB_EQUAR ATP SYNTHASE BETA CHAIN >gi|1934690|gb|AAB5... 97 9e-19
emb|CAB90085.1| (AJ235484) ATP synthase beta subunit [Gonocaryum... 97 9e-19
sp|P26527|ATPB_SYNY3 ATP SYNTHASE BETA CHAIN >gi|67845|pir||PWYB... 97 1e-18
sp|P40291|YSCN_YERPS PROBABLE ATP SYNTHASE YSCN (YOPS SECRETION ... 97 1e-18
gb|AAA22253.1| (M31107) ATP synthase beta subunit (atpD) (EC 3.6... 96 1e-18
sp|P55717|Y4YI_RHISN PROBABLE ATP SYNTHASE Y4YI >gi|2182734|gb|A... 96 1e-18
sp|P00824|ATPB_ECOLI ATP SYNTHASE BETA CHAIN >gi|67830|pir||PWEC... 96 2e-18
pir||D64071 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 96 2e-18
sp|P43715|ATPB_HAEIN ATP SYNTHASE BETA CHAIN >gi|1573457|gb|AAC2... 96 2e-18
sp|P42468|ATPB_BURCE ATP SYNTHASE BETA CHAIN >gi|587502|emb|CAA5... 96 3e-18
gb|AAF19362.1|AF188265_8 (AF188265) ATP synthase subunit beta [S... 96 3e-18
sp|Q07232|ATPB_BUCAP ATP SYNTHASE BETA CHAIN >gi|2827018|gb|AAC3... 95 3e-18
pir||C82952 ATP synthase beta chain PA5554 [imported] - Pseudomo... 95 3e-18
gb|AAC38383.1| (AF022236) EscN [Escherichia coli] 94 1e-17
gb|AAC31513.1| (AF071034) L0034 [Escherichia coli] 94 1e-17
emb|CAB90064.1| (AJ235459) ATP synthase beta subunit [Dischidia ... 94 1e-17
sp|P57124|ATPB_BUCAI ATP SYNTHASE BETA CHAIN >gi|10038701|dbj|BA... 94 1e-17
pir||A26926 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 93 1e-17
sp|P06540|ATPB_ANASP ATP SYNTHASE BETA CHAIN >gi|142006|gb|AAA21... 93 1e-17
emb|CAA50332.1| (X71013) ATP synthase beta subunit [Drosophila m... 93 1e-17
sp|Q25117|ATPB_HEMPU ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PREC... 93 1e-17
sp|Q26976|VATB_TRYCO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B... 93 1e-17
sp|Q05825|ATPB_DROME ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PREC... 93 1e-17
gb|AAB69192.1| (AF005744) YsaN [Yersinia enterocolitica] 93 1e-17
pir||B75009 ribonucleotide reductase (nrd) PAB1057 - Pyrococcus ... 93 1e-17
sp|Q57710|IF2P_METJA PROBABLE TRANSLATION INITIATION FACTOR IF-2... 93 2e-17
pir||JC5798 F0F1-ATPase (EC 3.4.-.-) beta chain - Methanosarcina... 93 2e-17
gb|AAF59391.1| (AE003846) ATPsyn-beta gene product [Drosophila m... 93 2e-17
pir||G81024 ATP synthase F1, beta chain NMB1934 [imported] - Nei... 92 2e-17
gb|AAB17681.1| (L12251) putative ATPase [Sinorhizobium fredii] 92 4e-17
pir||C81970 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 91 6e-17
pir||G82715 ATP synthase, beta chain XF1143 [imported] - Xylella... 91 6e-17
sp|P50003|ATPB_PRODI ATP SYNTHASE BETA CHAIN >gi|285202|pir||A42... 90 1e-16
sp|P07890|ATPB_SYNP6 ATP SYNTHASE BETA CHAIN >gi|67844|pir||PWYC... 89 2e-16
dbj|BAA23755.1| (AB009314) proton-translocating ATPase, beta sub... 89 2e-16
pir||H71143 probable ribonucleoside-diphosphate reductase - Pyro... 87 7e-16
sp|P22550|VATB_CANTR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 87 1e-15
sp|Q08637|NTPB_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT B (NA(+)... 85 3e-15
gb|AAD55091.1|AF179250_1 (AF179250) vacuolar-type H+ transportin... 85 3e-15
gb|AAD33861.1| (AF140022) V-type ATPase B subunit [Oncorhynchus ... 85 4e-15
sp|Q58446|RPA2_METJA DNA-DIRECTED RNA POLYMERASE SUBUNIT A" >gi|... 84 8e-15
pir||C71110 hypothetical protein PH0650 - Pyrococcus horikoshii ... 81 5e-14
emb|CAB75846.1| (AJ250266) ATP synthase beta chain [Amphidinium ... 80 1e-13
sp|P11593|VATB_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 5... 79 3e-13
sp|O66907|ATPA_AQUAE ATP SYNTHASE ALPHA CHAIN >gi|7436078|pir||G... 78 4e-13
sp|Q07405|ATPA_MYXXA ATP SYNTHASE ALPHA CHAIN (59 KD MEMBRANE-AS... 78 5e-13
sp|Q02848|ATPA_ANTSP ATP SYNTHASE ALPHA CHAIN >gi|485445|pir||S2... 76 2e-12
gb|AAB88551.1| (AF036246) putative F1-ATP synthase alpha subunit... 76 2e-12
gi|11466784 ATPase alpha subunit [Oryza sativa] >gi|114521|sp|P1... 76 2e-12
sp|P12112|ATPA_WHEAT ATP SYNTHASE ALPHA CHAIN >gi|67828|pir||PWW... 76 2e-12
sp|Q58242|Y832_METJA HYPOTHETICAL PROTEIN MJ0832 >gi|2129243|pir... 76 2e-12
sp|O50288|ATPA_RICPR ATP SYNTHASE ALPHA CHAIN >gi|7436072|pir||E... 76 2e-12
sp|Q05372|ATPA_SYNP1 ATP SYNTHASE ALPHA CHAIN >gi|480492|pir||S3... 75 4e-12
sp|P20022|ATPB_METTL ATP SYNTHASE BETA CHAIN >gi|80952|pir||S050... 75 5e-12
gi|11465708 ATP synthase CF1 alpha chain [Porphyra purpurea] >gi... 75 5e-12
emb|CAB95752.1| (AJ247127) putative ATP synthetase beta-subunit ... 75 5e-12
sp|P27179|ATPA_SYNY3 ATP SYNTHASE ALPHA CHAIN >gi|67817|pir||PWY... 74 7e-12
pir||S37647 H+-transporting ATP synthase (EC 3.6.1.34) beta chai... 74 9e-12
emb|CAB95755.1| (AJ247130) putative ATP synthetase beta-subunit ... 73 2e-11
pir||D71480 probable flagellum-specific ATP synthase - Chlamydia... 72 3e-11
sp|P05493|ATP0_PEA ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL >gi|5... 72 4e-11
pir||A26760 H+-transporting ATP synthase (EC 3.6.1.34) alpha cha... 72 4e-11
dbj|BAA00131.1| (D00193) F1 ATPase alpha-subunit type 4 [Pisum s... 72 4e-11
emb|CAB95750.1| (AJ247125) putative ATP synthetase beta-subunit ... 72 4e-11
emb|CAB95762.1| (AJ247137) putative ATP synthetase beta-subunit ... 72 4e-11
emb|CAB95761.1| (AJ247136) putative ATP synthetase beta-subunit ... 71 5e-11
emb|CAB95751.1| (AJ247126) putative ATP synthetase beta-subunit ... 71 6e-11
emb|CAB95764.1| (AJ247139) putative ATP synthetase beta-subunit ... 71 6e-11
gi|11467189 ATPase alpha subunit [Zea mays] >gi|114518|sp|P05022... 71 8e-11
pir||D81743 virulence ATPase, probable TC0090 [imported] - Chlam... 71 8e-11
>pir||D75028 h+-transporting ATP synthase, chain alpha (atpa) PAB2378 - Pyrococcus
abyssi (strain Orsay) >gi|5459180|emb|CAB50666.1|
(AJ248288) H+-transporting ATP synthase, subunit Alpha
(atpA) [Pyrococcus abyssi]
Length = 1017
Score = 2036 bits (5218), Expect = 0.0
Identities = 1017/1017 (100%), Positives = 1017/1017 (100%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR
Sbjct: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF
Sbjct: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP
Sbjct: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK
Sbjct: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
Query: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIK 300
CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIK
Sbjct: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIK 300
Query: 301 ATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVA 360
ATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVA
Sbjct: 301 ATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVA 360
Query: 361 KKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADGTLKPRTVAIYNNDESL 420
KKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADGTLKPRTVAIYNNDESL
Sbjct: 361 KKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADGTLKPRTVAIYNNDESL 420
Query: 421 LRRANELANELFNIEGKIVKGRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLI 480
LRRANELANELFNIEGKIVKGRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLI
Sbjct: 421 LRRANELANELFNIEGKIVKGRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLI 480
Query: 481 SEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYAIIREKIIGD 540
SEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYAIIREKIIGD
Sbjct: 481 SEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYAIIREKIIGD 540
Query: 541 KVYYRVVISGESNLEKLGIERVGRGYTSYDIVPVEVEELYNALGRPYAELKRAGIEIHNY 600
KVYYRVVISGESNLEKLGIERVGRGYTSYDIVPVEVEELYNALGRPYAELKRAGIEIHNY
Sbjct: 541 KVYYRVVISGESNLEKLGIERVGRGYTSYDIVPVEVEELYNALGRPYAELKRAGIEIHNY 600
Query: 601 LSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETHNFIG 660
LSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETHNFIG
Sbjct: 601 LSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETHNFIG 660
Query: 661 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 720
GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT
Sbjct: 661 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 720
Query: 721 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 780
VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP
Sbjct: 721 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 780
Query: 781 GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV 840
GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV
Sbjct: 781 GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV 840
Query: 841 KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESE 900
KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESE
Sbjct: 841 KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESE 900
Query: 901 LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY 960
LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY
Sbjct: 901 LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY 960
Query: 961 DKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
DKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA
Sbjct: 961 DKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
>pir||G71213 probable H(+)-transporting ATP synthase subunit A - Pyrococcus
horikoshii >gi|3258419|dbj|BAA31102.1| (AP000007) 964aa
long hypothetical H(+)-transporting ATP synthase subunit
A [Pyrococcus horikoshii]
Length = 964
Score = 1632 bits (4179), Expect = 0.0
Identities = 824/1017 (81%), Positives = 887/1017 (87%), Gaps = 53/1017 (5%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR
Sbjct: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
PGEPV+GTG+SLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF
Sbjct: 61 PGEPVVGTGASLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
IPK KVGDKVVGGDIIGEVPETSII HKIMVPPGIEGEIVEIAEEG+YTIEEVIAKVKTP
Sbjct: 121 IPKAKVGDKVVGGDIIGEVPETSIIVHKIMVPPGIEGEIVEIAEEGDYTIEEVIAKVKTP 180
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK
Sbjct: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
Query: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIK 300
CVDGDTLVLTKEFGLIKIK+LY+ LDGKG+K V GNEEWTELE+PIT+YGYKDGKIVEIK
Sbjct: 241 CVDGDTLVLTKEFGLIKIKELYEKLDGKGRKIVEGNEEWTELEKPITVYGYKDGKIVEIK 300
Query: 301 ATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVA 360
ATHVYKG S+GM+EIRTRTGRKIKVTPIH+LFTGRVTK+GL ++EVMA +K GDRI V
Sbjct: 301 ATHVYKGVSSGMVEIRTRTGRKIKVTPIHRLFTGRVTKDGLILKEVMAMHVKPGDRIAVV 360
Query: 361 KKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADGTLKPRTVAIYNNDESL 420
KKIDGGE +KL + +I++P++L+E+LAEFLGYL+A+GTLK + IY +DESL
Sbjct: 361 KKIDGGEYIKL----DSSNVGEIKVPEILNEELAEFLGYLMANGTLKSGIIEIYCDDESL 416
Query: 421 LRRANELANELFNIEGKIVKGRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLI 480
L R N L+ +LF + G+IV+ KAL+I SK LV+ +LGVP +KK WKVP+ELL+
Sbjct: 417 LERVNSLSLKLFGVGGRIVQKVDGKALVIQSKPLVDVLRRLGVPEDKKVENWKVPRELLL 476
Query: 481 SEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYAIIREKIIGD 540
S VV+AF+ AYI + K E+EI ASEE AY SYL AKLGIY I + G+
Sbjct: 477 SPSNVVRAFVNAYI-------KGKEEVEITLASEEGAYELSYLFAKLGIYVTISKS--GE 527
Query: 541 KVYYRVVISGESNLEKLGIERVGRGYTSYDIVPVEVEELYNALGRPYAELKRAGIEIHNY 600
YY+V +S NL D +PVEV + L
Sbjct: 528 --YYKVRVSRRGNL---------------DTIPVEVNGMPKVL----------------- 553
Query: 601 LSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETHNFIG 660
YE FRKFAK +G+EE+AENHL H++FDE++++RYI E QEVYDVTTETHNF+G
Sbjct: 554 ------PYEDFRKFAKSIGLEEVAENHLQHIIFDEVIDVRYIPEPQEVYDVTTETHNFVG 607
Query: 661 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 720
GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT
Sbjct: 608 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 667
Query: 721 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 780
VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP
Sbjct: 668 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 727
Query: 781 GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV 840
GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV
Sbjct: 728 GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV 787
Query: 841 KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESE 900
KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKN+DPEWKAMRDKAM LLQKESE
Sbjct: 788 KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEWKAMRDKAMALLQKESE 847
Query: 901 LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY 960
LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY
Sbjct: 848 LQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY 907
Query: 961 DKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
DKTMEAI+RGVPLEEIAKLPVREEIGRMKFE DV KI++LIDKTNEQFEELFKKYGA
Sbjct: 908 DKTMEAINRGVPLEEIAKLPVREEIGRMKFERDVSKIRSLIDKTNEQFEELFKKYGA 964
>pir||T44309 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain [imported] -
Thermococcus sp. (strain KI) >gi|2605627|dbj|BAA23342.1|
(D88772) ATPase alpha subunit [Thermococcus sp.]
Length = 585
Score = 662 bits (1689), Expect = 0.0
Identities = 317/348 (91%), Positives = 339/348 (97%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSDAQVV+YIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM
Sbjct: 238 TVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 297
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGITIAEYFRD GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL
Sbjct: 298 PVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 357
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
ASK+AEFYERAGRV+TLGSD RVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD
Sbjct: 358 ASKIAEFYERAGRVITLGSDERVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 417
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LARRRHFPAINWL SYSLYVDA++DWWHKNVDPEW+ MRD AM LLQKE+ELQEIVRIVG
Sbjct: 418 LARRRHFPAINWLRSYSLYVDAIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVG 477
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP+RE+AIL+V RMLREDYLQQDAFDEVDTYCPP+KQVTMMRV+LNFY+KTM+A+ R
Sbjct: 478 PDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYEKTMQAVDR 537
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
GVP++EIAKLPVRE+IGRMKFEPDV K++ALID+TN+QFEELFKKYGA
Sbjct: 538 GVPVDEIAKLPVREKIGRMKFEPDVEKVRALIDETNQQFEELFKKYGA 585
Score = 434 bits (1103), Expect = e-120
Identities = 217/283 (76%), Positives = 242/283 (84%), Gaps = 4/283 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRIIRVTGPLVVADGMKGAKMYEVVRVGE+GLIGEIIRLEGDKAVIQVYEETAG+RPGEP
Sbjct: 2 GRIIRVTGPLVVADGMKGAKMYEVVRVGEMGLIGEIIRLEGDKAVIQVYEETAGIRPGEP 61
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V GTGSSLSVELGPGLLTS+YDGIQRPL+V+R+ +GDFIARG+TAPALPRDKKWHF PKV
Sbjct: 62 VEGTGSSLSVELGPGLLTSMYDGIQRPLDVLRQLSGDFIARGLTAPALPRDKKWHFTPKV 121
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
KVGDKVVGGDI+G VPETSII HKI+VPP +EGEIVEIAEEG+YT+EEVI KVK P G I
Sbjct: 122 KVGDKVVGGDILGVVPETSIIEHKILVPPWVEGEIVEIAEEGDYTVEEVIVKVKKPDGTI 181
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
+ELKMY RWPVRVKRPYK+KLPPEVPLITGQR IDTFF QAKGGTAAIPGPFGSGK V
Sbjct: 182 EELKMYHRWPVRVKRPYKQKLPPEVPLITGQRTIDTFFSQAKGGTAAIPGPFGSGKTVTQ 241
Query: 245 DTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
L + ++ +Y +G + + EE+ +L+ P T
Sbjct: 242 HQLAKWSDAQVV----VYIGCGERGNEMTDVLEEFPKLKDPKT 280
>pir||JC5532 vacuolar-type ATPase (EC 3.-.-.-) A chain - Desulfurococcus mobils
Length = 585
Score = 659 bits (1682), Expect = 0.0
Identities = 316/348 (90%), Positives = 339/348 (96%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSDAQVV+YIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM
Sbjct: 238 TVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 297
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGITIAEYFRD GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL
Sbjct: 298 PVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 357
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
ASK+AEFYERAGRVVTLGS+ RVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD
Sbjct: 358 ASKIAEFYERAGRVVTLGSEPRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 417
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LARRRHFPAINWL SYSLY+D+++DWWHKNVDPEW+ MRD AM LLQKE+ELQEIVRIVG
Sbjct: 418 LARRRHFPAINWLRSYSLYLDSIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVG 477
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP+RE+AIL+V RMLREDYLQQDAFDEVDTYCPP+KQVTMMRV+LNFY++TMEA+ R
Sbjct: 478 PDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYERTMEAVDR 537
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
GVP++EIAKLPVRE+IGRMKFEPD+ KI+ALID+TNEQFEELFKKYGA
Sbjct: 538 GVPVDEIAKLPVREKIGRMKFEPDIEKIRALIDETNEQFEELFKKYGA 585
Score = 423 bits (1076), Expect = e-117
Identities = 213/283 (75%), Positives = 237/283 (83%), Gaps = 4/283 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRIIRVTGPLVVADG KG+KMYEVVRVGE+GLIGEIIRLEGDKAVIQVYEETAG+RPGEP
Sbjct: 2 GRIIRVTGPLVVADGXKGSKMYEVVRVGEMGLIGEIIRLEGDKAVIQVYEETAGIRPGEP 61
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V GTGSSLSVELGPGLLTS+YDGIQRPLE +RE +GDFIARG+TAPALPRDKKWHF P V
Sbjct: 62 VEGTGSSLSVELGPGLLTSMYDGIQRPLEKLRELSGDFIARGLTAPALPRDKKWHFTPTV 121
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
KVGDKV GGDI+G VPETSII HKI+VPP +EGEIVEIAEEG+YT+EEVIAKVK P G I
Sbjct: 122 KVGDKVTGGDILGVVPETSIIEHKILVPPWVEGEIVEIAEEGDYTVEEVIAKVKKPDGSI 181
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
+ELKMY +WPVRVKRPYK KLPPEVPLITGQR IDTFF AKGGTAAIPGPFGSGK V
Sbjct: 182 EELKMYHKWPVRVKRPYKNKLPPEVPLITGQRTIDTFFSIAKGGTAAIPGPFGSGKTVTQ 241
Query: 245 DTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
L + ++ +Y +G + + EE+ +L+ P T
Sbjct: 242 HQLAKWSDAQVV----VYIGCGERGNEMTDVLEEFPKLKDPKT 280
>pir||T44674 H+-transporting ATP synthase, chain A [imported] - Desulfurococcus
sp. (strain SY) >gi|2104726|gb|AAB64416.1| (U96487)
V-ATPase A subunit [Desulfurococcus sp. SY]
Length = 585
Score = 659 bits (1682), Expect = 0.0
Identities = 316/348 (90%), Positives = 339/348 (96%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSDAQVV+YIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM
Sbjct: 238 TVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 297
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGITIAEYFRD GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL
Sbjct: 298 PVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 357
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
ASK+AEFYERAGRVVTLGS+ RVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD
Sbjct: 358 ASKIAEFYERAGRVVTLGSEPRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 417
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LARRRHFPAINWL SYSLY+D+++DWWHKNVDPEW+ MRD AM LLQKE+ELQEIVRIVG
Sbjct: 418 LARRRHFPAINWLRSYSLYLDSIQDWWHKNVDPEWRKMRDTAMALLQKEAELQEIVRIVG 477
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP+RE+AIL+V RMLREDYLQQDAFDEVDTYCPP+KQVTMMRV+LNFY++TMEA+ R
Sbjct: 478 PDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQVTMMRVILNFYERTMEAVDR 537
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
GVP++EIAKLPVRE+IGRMKFEPD+ KI+ALID+TNEQFEELFKKYGA
Sbjct: 538 GVPVDEIAKLPVREKIGRMKFEPDIEKIRALIDETNEQFEELFKKYGA 585
Score = 425 bits (1082), Expect = e-118
Identities = 214/283 (75%), Positives = 238/283 (83%), Gaps = 4/283 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRIIRVTGPLVVADGMKG+KMYEVVRVGE+GLIGEIIRLEGDKAVIQVYEETAG+RPGEP
Sbjct: 2 GRIIRVTGPLVVADGMKGSKMYEVVRVGEMGLIGEIIRLEGDKAVIQVYEETAGIRPGEP 61
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V GTGSSLSVELGPGLLTS+YDGIQRPLE +RE +GDFIARG+TAPALPRDKKWHF P V
Sbjct: 62 VEGTGSSLSVELGPGLLTSMYDGIQRPLEKLRELSGDFIARGLTAPALPRDKKWHFTPTV 121
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
KVGDKV GGDI+G VPETSII HKI+VPP +EGEIVEIAEEG+YT+EEVIAKVK P G I
Sbjct: 122 KVGDKVTGGDILGVVPETSIIEHKILVPPWVEGEIVEIAEEGDYTVEEVIAKVKKPDGSI 181
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
+ELKMY +WPVRVKRPYK KLPPEVPLITGQR IDTFF AKGGTAAIPGPFGSGK V
Sbjct: 182 EELKMYHKWPVRVKRPYKNKLPPEVPLITGQRTIDTFFSIAKGGTAAIPGPFGSGKTVTQ 241
Query: 245 DTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
L + ++ +Y +G + + EE+ +L+ P T
Sbjct: 242 HQLAKWSDAQVV----VYIGCGERGNEMTDVLEEFPKLKDPKT 280
>sp|Q57670|ATPA_METJA ATP SYNTHASE ALPHA CHAIN >gi|2118218|pir||B64327 H+-transporting ATP
synthase (EC 3.6.1.34) subunit A - Methanococcus
jannaschii >gi|1590955|gb|AAB98200.1| (U67477)
H+-transporting ATP synthase, subunit A (atpA)
[Methanococcus jannaschii]
Length = 594
Score = 516 bits (1315), Expect = e-145
Identities = 246/348 (70%), Positives = 293/348 (83%), Gaps = 3/348 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSDA VV+YIGCGERGNEMT+V+EEFP L+D +TG LM+RTVLIANTSNM
Sbjct: 248 TVTQHQLAKWSDADVVVYIGCGERGNEMTEVIEEFPHLEDIRTGNKLMDRTVLIANTSNM 307
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTGITIAEYFRDMGY V L ADSTSRWAEA+REISGRLEEMPGEEGYPAYL
Sbjct: 308 PVAAREASVYTGITIAEYFRDMGYGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYL 367
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS+LA+FYERAGRV+TLG D R G V ++GAVSPPGGDFSEPV NTLR+VKVFWALDA+
Sbjct: 368 ASRLAQFYERAGRVITLGKDNRQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDAN 427
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LARRRHFPAINWL SYSLY+D V +WW+ N P+W+ +RD+AM LLQKE+ELQEIV++VG
Sbjct: 428 LARRRHFPAINWLQSYSLYIDDVTEWWNTNTGPDWRQLRDEAMSLLQKEAELQEIVQLVG 487
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP+RER IL VARMLRED+LQQDAFDEVDTYCPP KQ M+++++ FY + ++A+ R
Sbjct: 488 PDALPDRERVILEVARMLREDFLQQDAFDEVDTYCPPMKQYLMLKIIMTFYQEALKAVER 547
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKKYGA 1017
GV +I + V+++I RMK+ P I K+ E E++ + G+
Sbjct: 548 GVEPAKILGVSVKQDIARMKYIPHDEFINV---KSKEIMEKIKNELGS 592
Score = 333 bits (844), Expect = 7e-90
Identities = 173/284 (60%), Positives = 210/284 (73%), Gaps = 6/284 (2%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
M G+II++ GP+VVA+GMKGA+MYEVV+VGE L GEII+L DKAVIQVYEET+G++
Sbjct: 8 MPVVGKIIKIAGPVVVAEGMKGAQMYEVVKVGEEKLTGEIIQLHDDKAVIQVYEETSGIK 67
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWH 119
PGEPV+GTG+ LSVELGPG+L ++YDGIQRPL I EKTG FI RGV PALPRD KW
Sbjct: 68 PGEPVVGTGAPLSVELGPGMLRAMYDGIQRPLTAIEEKTGSIFIPRGVDVPALPRDIKWE 127
Query: 120 FIPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKT 179
F P V GD V GDIIG V ET I HKI+VP G++G+IVEI +EG++T+EE +A V+T
Sbjct: 128 FKPVVNEGDYVEEGDIIGTVDETPSIVHKILVPIGVKGKIVEI-KEGKFTVEETVAVVET 186
Query: 180 PSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSG 239
+GE KE+ M Q+WPVR RPYKEKLPPE+PLITGQRV DTFF AKGGTAAIPGPFGSG
Sbjct: 187 ENGERKEITMMQKWPVRKPRPYKEKLPPEIPLITGQRVEDTFFTLAKGGTAAIPGPFGSG 246
Query: 240 KCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELE 283
K V L + ++ +Y +G + EE+ LE
Sbjct: 247 KTVTQHQLAKWSDADVV----VYIGCGERGNEMTEVIEEFPHLE 286
>pir||G69227 ATP synthase, subunit A - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622052|gb|AAB85451.1| (AE000869)
ATP synthase, subunit A [Methanobacterium
thermoautotrophicum]
Length = 584
Score = 510 bits (1300), Expect = e-143
Identities = 234/324 (72%), Positives = 282/324 (86%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ QLAKW+DA +++Y+GCGERGNEMT+VL+EFP+L+DPKTG PLM+RTVLIANTSNM
Sbjct: 240 TVTQQQLAKWADADIIVYVGCGERGNEMTEVLKEFPELEDPKTGNPLMDRTVLIANTSNM 299
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREA +YTGITIAEYFRDMGYDVALMADSTSRWAEA+REISGRLEEMPGEEGYPAYL
Sbjct: 300 PVAAREACVYTGITIAEYFRDMGYDVALMADSTSRWAEAMREISGRLEEMPGEEGYPAYL 359
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS+LA+FYERAGRV T+GS+ ++ SVSV+GAVSPPGGD SEPV QNTLR+ KVFWALDA
Sbjct: 360 ASRLAQFYERAGRVTTIGSEDKIASVSVVGAVSPPGGDLSEPVTQNTLRICKVFWALDAS 419
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA +RHFP+I+WL SYSLY+D+V++WW NVDPEW+ RD+AM LLQKE+ELQEIV++VG
Sbjct: 420 LADKRHFPSIDWLQSYSLYIDSVQEWWASNVDPEWRKFRDEAMALLQKEAELQEIVQLVG 479
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP+RER L RM+RED+LQQ+A+ EVDTYC P KQ M+R ++ F+ A+ +
Sbjct: 480 PDALPDRERITLETTRMIREDFLQQNAYHEVDTYCSPSKQFEMLRTIIMFHRNATAALEK 539
Query: 970 GVPLEEIAKLPVREEIGRMKFEPD 993
G P +I LPV+E+IGRMK+ P+
Sbjct: 540 GAPAADIISLPVKEDIGRMKYIPE 563
Score = 326 bits (827), Expect = 7e-88
Identities = 165/287 (57%), Positives = 211/287 (73%), Gaps = 5/287 (1%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
M +GRII++ GP+++A+GM+G++MYE+V+VGE LIGEII LEGD A IQVYEETAG++
Sbjct: 1 MTQEGRIIKIAGPVIIAEGMRGSQMYEMVKVGEDKLIGEIIELEGDTATIQVYEETAGIK 60
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
PGE V TG LSVELGPG+L SI+DGIQRPLE I+ TGD+I RGV P+LP+DKKW F
Sbjct: 61 PGETVERTGGPLSVELGPGILGSIFDGIQRPLENIKALTGDYIERGVDVPSLPKDKKWTF 120
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
P + G V GGDIIGEV ETS ITH+IM+PP +EG++ IA +GEYT+ + IA+V+T
Sbjct: 121 KPTAREGQMVKGGDIIGEVEETSSITHRIMIPPNVEGKLTMIAPQGEYTVLDDIAEVETE 180
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
SG ++++M Q+WPVR RPYK+KL P+VPL+TGQR DTFF AKGGTAAIPGPFGSGK
Sbjct: 181 SG-TEKIQMLQKWPVRKGRPYKKKLDPDVPLVTGQRAQDTFFSVAKGGTAAIPGPFGSGK 239
Query: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
V L + +I +Y +G + +E+ ELE P T
Sbjct: 240 TVTQQQLAKWADADII----VYVGCGERGNEMTEVLKEFPELEDPKT 282
>emb|CAC11153.1| (AL445063) probable ATP synthase, subunit A (intein containing)
[Thermoplasma acidophilum]
Length = 764
Score = 501 bits (1275), Expect = e-140
Identities = 242/386 (62%), Positives = 301/386 (77%), Gaps = 6/386 (1%)
Query: 633 FDEIVEIRYISEGQEVYDVTTETH--NFIGGNMPTLLHNTVTQHQLAKWSDAQVVIYIGC 690
FD +V S +VYD+ + NFIGGN +LHNTV QHQLAKWSDA +V+YIGC
Sbjct: 371 FDRVVSKEMHSGVFDVYDLMVPDYGYNFIGGNGLIVLHNTVIQHQLAKWSDANIVVYIGC 430
Query: 691 GERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRD 750
GERGNEMT++L FP+LKDP TG+PLM+RTVLIANTSNMPVAAREASIYTGITIAEY+RD
Sbjct: 431 GERGNEMTEILTTFPELKDPNTGQPLMDRTVLIANTSNMPVAAREASIYTGITIAEYYRD 490
Query: 751 MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDY 810
MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL +++EFYER+GR + D
Sbjct: 491 MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRVSEFYERSGRARLVSPDE 550
Query: 811 RVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVD 870
R GS++VIGAVSPPGGD SEPV QNTLRV +VFWALDA LA RRHFP+INWL SYSLY +
Sbjct: 551 RYGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTE 610
Query: 871 AVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLRED 930
++ W+ KNV EW A+R++AME+LQ+ESELQE+ ++VG DA+PE+E++IL VAR++RED
Sbjct: 611 DLRSWYDKNVSSEWSALRERAMEILQRESELQEVAQLVGYDAMPEKEKSILDVARIIRED 670
Query: 931 YLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKLPVREEIGRMKF 990
+LQQ AFDE+D YC +KQ M++ ++ +A+ G ++ +A L VRE++ RMK
Sbjct: 671 FLQQSAFDEIDAYCSLKKQYLMLKAIMEIDTYQNKALDSGATMDNLASLAVREKLSRMKI 730
Query: 991 EPDVGKIKALIDKTNEQFEELFKKYG 1016
P+ + N+ EE+ K+YG
Sbjct: 731 VPEA----QVESYYNDLVEEIHKEYG 752
Score = 369 bits (936), Expect = e-100
Identities = 191/365 (52%), Positives = 256/365 (69%), Gaps = 9/365 (2%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+IIR++GP+VVA+ ++ AKMY+VV+VGE+GLIGEII++EG+++ IQVYE+TAG+RP E
Sbjct: 2 GKIIRISGPVVVAEDVEDAKMYDVVKVGEMGLIGEIIKIEGNRSTIQVYEDTAGIRPDEK 61
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V T LSVELGPG+L SIYDGIQRPL+VI+ +GDFIARG+ PAL R KKW F+P V
Sbjct: 62 VENTRRPLSVELGPGILKSIYDGIQRPLDVIKITSGDFIARGLNPPALDRQKKWEFVPAV 121
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
K G+ V G I+G V ETS+ITH+IMVP GI G++ IA +GE+ +E+VIA V + +G+
Sbjct: 122 KKGETVFPGQILGTVQETSLITHRIMVPEGISGKVTMIA-DGEHRVEDVIATV-SGNGKS 179
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
+++M WPVR R + KLPPE+PL+TGQRVID FP AKGGTAA+PGPFGSGKCV G
Sbjct: 180 YDIQMMTTWPVRKARRVQRKLPPEIPLVTGQRVIDALFPVAKGGTAAVPGPFGSGKCVSG 239
Query: 245 DTLVLTKEFGLIKIKDLY--KILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIKAT 302
DT VL + G +I DL+ I D K + NEE L P+ +Y +IVE +
Sbjct: 240 DTPVLL-DAGERRIGDLFMEAIQDQKNAVEIGQNEEIVRLHDPLRIYSMVGSEIVESVSH 298
Query: 303 HVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKK 362
+Y G S ++ +RT GR+++VTP+HKLF K G + E A ++ +GD I A
Sbjct: 299 AIYHGKSNAIVTVRTENGREVRVTPVHKLF----VKIGNSVIERPASEVNEGDEIACASV 354
Query: 363 IDGGE 367
+ G+
Sbjct: 355 SENGD 359
>dbj|BAB00608.1| (AB045977) A-ATPase A-subunit [Thermoplasma acidophilum]
>gi|9369338|emb|CAB99208.1| (AJ292523) A-ATPase A-subunit
[Thermoplasma acidophilum]
>gi|9502270|gb|AAF88065.1|AF286477_1 (AF286477) A-ATPase
A-subunit [Thermoplasma acidophilum]
Length = 763
Score = 490 bits (1249), Expect = e-137
Identities = 238/386 (61%), Positives = 296/386 (76%), Gaps = 6/386 (1%)
Query: 633 FDEIVEIRYISEGQEVYDVTTETH--NFIGGNMPTLLHNTVTQHQLAKWSDAQVVIYIGC 690
FD +V S +VYD+ + NFIGGN +LHNTV QHQLAKWSDA +V+YIGC
Sbjct: 370 FDRVVSKEMHSGVFDVYDLMVPDYGYNFIGGNGLIVLHNTVIQHQLAKWSDANIVVYIGC 429
Query: 691 GERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRD 750
GERGNEMT++L FP+LKDP TG+PLM IANTSNMPVAAREASIYTGITIAEY+RD
Sbjct: 430 GERGNEMTEILTTFPELKDPNTGQPLMTGLSFIANTSNMPVAAREASIYTGITIAEYYRD 489
Query: 751 MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDY 810
MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL +++EFYER+GR + D
Sbjct: 490 MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRVSEFYERSGRARLVSPDE 549
Query: 811 RVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVD 870
R GS++VIGAVSPPGGD SEPV QNTLRV +VFWALDA LA RRHFP+INWL SYSLY +
Sbjct: 550 RYGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTE 609
Query: 871 AVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLRED 930
++ W+ KNV EW A+R++AME+LQ+ESELQE+ ++VG DA+PE+E++IL VAR++RED
Sbjct: 610 DLRSWYDKNVSSEWSALRERAMEILQRESELQEVAQLVGYDAMPEKEKSILDVARIIRED 669
Query: 931 YLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKLPVREEIGRMKF 990
+LQQ AFDE+D YC +KQ M++ ++ +A+ G ++ +A L VRE++ RMK
Sbjct: 670 FLQQSAFDEIDAYCSLKKQYLMLKAIMEIDTYQNKALDSGATMDNLASLAVREKLSRMKI 729
Query: 991 EPDVGKIKALIDKTNEQFEELFKKYG 1016
P+ + N+ EE+ K+YG
Sbjct: 730 VPEA----QVESYYNDLVEEIHKEYG 751
Score = 322 bits (817), Expect = 1e-86
Identities = 173/364 (47%), Positives = 240/364 (65%), Gaps = 8/364 (2%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+IIR++GP+VVA+ ++ AKMY+VV+VGE+GLIGEII++EG+++ IQVYE+TAG+RP E
Sbjct: 2 GKIIRISGPVVVAEDVEDAKMYDVVKVGEMGLIGEIIKIEGNRSTIQVYEDTAGIRPDEK 61
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V T LSVELGPG+L SIYDGIQRPL+VI+ +GDFIARG+ PAL R KKW F+P V
Sbjct: 62 VENTRRPLSVELGPGILKSIYDGIQRPLDVIKITSGDFIARGLNPPALDRQKKWEFVPAV 121
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
K G+ V G I+G V ETS+ITH+IMVP GI G++ IA +GE+ +E+VIA V + +G+
Sbjct: 122 KKGETVFPGQILGTVQETSLITHRIMVPEGISGKVTMIA-DGEHRVEDVIATV-SGNGKS 179
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
+++M WPVR R + KL PL+T Q FP A+ +PGPFGSGKCV G
Sbjct: 180 YDIQMMTTWPVRKARRVQRKLLSRDPLVTAQSGNRCAFPVAEAANCRVPGPFGSGKCVSG 239
Query: 245 DTLVLTKEFGLIKIKDLY-KILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIKATH 303
DT VL + G +I DL+ + + K + + NEE L +Y +IVE +
Sbjct: 240 DTPVLL-DAGERRIGDLFMEAIRPKERGEIGQNEEIVRLHDSWRIYSMVGSEIVETVSHA 298
Query: 304 VYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKKI 363
+Y G S ++ +RT GR+++VTP+HKLF K G + E A ++ +GD I
Sbjct: 299 IYHGKSNAIVNVRTENGREVRVTPVHKLF----VKIGNSVIERPASEVNEGDEIAWPSVS 354
Query: 364 DGGE 367
+ G+
Sbjct: 355 ENGD 358
>gi|11498766 H+-transporting ATP synthase, subunit A (atpA) [Archaeoglobus
fulgidus] >gi|7436319|pir||E69395 H+-transporting ATP
synthase, subunit A (atpA) homolog - Archaeoglobus
fulgidus >gi|2649416|gb|AAB90074.1| (AE001023)
H+-transporting ATP synthase, subunit A (atpA)
[Archaeoglobus fulgidus]
Length = 581
Score = 479 bits (1219), Expect = e-134
Identities = 233/324 (71%), Positives = 272/324 (83%), Gaps = 2/324 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSDAQ+V+YIGCGERGNEMT+VLEEFP+L+DP+TGKPLMERTVL+ANTSNM
Sbjct: 241 TVTQHQLAKWSDAQIVVYIGCGERGNEMTEVLEEFPELEDPRTGKPLMERTVLVANTSNM 300
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTGITIAEYFRDMGYDVA+ ADSTSRWAEA+REISGRLEEMPGEEGYPAYL
Sbjct: 301 PVAAREASVYTGITIAEYFRDMGYDVAIQADSTSRWAEAMREISGRLEEMPGEEGYPAYL 360
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS+LAEFYERAGRV TL + +GSV+V+GAVSPPGGDFSEPV QNTLR+VKVFWALDA
Sbjct: 361 ASRLAEFYERAGRVKTLAGN--IGSVTVVGAVSPPGGDFSEPVTQNTLRIVKVFWALDAK 418
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RRHFPAINWL SYSLYVD +KDW+ +NV EW +R AME+LQ+E+ LQEIV++VG
Sbjct: 419 LAARRHFPAINWLQSYSLYVDTLKDWFAENVSEEWNELRRWAMEVLQEEANLQEIVQLVG 478
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALPE +R +L VAR++RE YL Q A+ VDTYC +KQ M++ + D +A+
Sbjct: 479 SDALPESQRVLLEVARIIREVYLIQYAYHPVDTYCSVQKQYDMLKAIKQINDWFYQALEA 538
Query: 970 GVPLEEIAKLPVREEIGRMKFEPD 993
G ++EIA + EE R KFE D
Sbjct: 539 GKTIDEIAGVEGLEEFARAKFEED 562
Score = 296 bits (749), Expect = 1e-78
Identities = 149/283 (52%), Positives = 198/283 (69%), Gaps = 9/283 (3%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I R++GPLVVA+G+K A+MY++ +VGE GL+GE++ L G K +IQVYE+T GV+PG+
Sbjct: 10 GEIYRISGPLVVAEGLK-ARMYDLCKVGEEGLMGEVVGLVGQKVLIQVYEDTEGVKPGDK 68
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V TG LSVELGPGL+ +IYDG+QRPL V++E +GDFI RG+ AP L R KW F P V
Sbjct: 69 VENTGMPLSVELGPGLIRNIYDGVQRPLPVLKEVSGDFIGRGIEAPGLDRKAKWEFKPLV 128
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
K G+KV G+IIG V ET ++ KI+VPP ++ ++ EG +T+E+ IA ++ +
Sbjct: 129 KKGEKVKPGEIIGTVQETEVVEQKILVPPNVKEGVIAEIYEGSFTVEDTIAVLEDGT--- 185
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
ELK+Y +WPVR+ RPY EKLPP VPLITGQR++DTFFP AKGGTAAIPGPFGSGK V
Sbjct: 186 -ELKLYHKWPVRIPRPYVEKLPPVVPLITGQRILDTFFPVAKGGTAAIPGPFGSGKTVTQ 244
Query: 245 DTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
L + ++ +Y +G + EE+ ELE P T
Sbjct: 245 HQLAKWSDAQIV----VYIGCGERGNEMTEVLEEFPELEDPRT 283
>sp|Q60186|ATPA_METMA ATP SYNTHASE ALPHA CHAIN (ATPASE SUBUNIT A) >gi|11267101|pir||T45107
H+-transporting ATP synthase (EC 3.6.1.34) chain A
[imported] - Methanosarcina mazei
>gi|1199638|gb|AAC06375.1| (U47274) A1AO H+ ATPase,
subunit A [Methanosarcina mazei]
Length = 578
Score = 454 bits (1155), Expect = e-126
Identities = 214/343 (62%), Positives = 281/343 (81%), Gaps = 3/343 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ QL+KWSD ++V+YIGCGERGNEM DVL EFP+L++P+TG+PLMERT+L+ANTSNM
Sbjct: 235 TVTQQQLSKWSDTEIVVYIGCGERGNEMADVLWEFPELEEPQTGRPLMERTILVANTSNM 294
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTG+T+AEYFRDMGYDV+LMADSTSRW EA+REIS RLEEMPGEEGYPAYL
Sbjct: 295 PVAAREASVYTGMTLAEYFRDMGYDVSLMADSTSRWPEAMREISSRLEEMPGEEGYPAYL 354
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+++LAEFYERAG TL + GS++ IGAVSPPGGDFSEPV QNTLR+VKVFWALDA
Sbjct: 355 SARLAEFYERAGVAETLCGE--KGSITAIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAK 412
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
L+++RHFPAINWL SYSLY + + DW+ +NV P++ MR++AM++LQ ESELQEIV++VG
Sbjct: 413 LSQKRHFPAINWLNSYSLYKEDLNDWFTENVAPDYVPMRERAMDMLQTESELQEIVQLVG 472
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALPE ++ +L + RM+RE +LQQ+AF +DTY P EKQ +M+ ++ + D M+A+
Sbjct: 473 SDALPEEQQLLLEITRMIREIFLQQNAFHPIDTYSPFEKQYKIMKAIMKWGDAAMDALKS 532
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDV-GKIKALIDKTNEQFEEL 1011
GVP EI K+ ++ + ++K+E + + A++ K +++F L
Sbjct: 533 GVPSSEILKIESKDSLPKVKYEENFEDSLNAVLAKMDKEFAAL 575
Score = 287 bits (726), Expect = 5e-76
Identities = 154/287 (53%), Positives = 191/287 (65%), Gaps = 10/287 (3%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
M KG I RV GP+V A G+ AKMY++ +VG GL+GE+I++ GDK +IQVYEET GVR
Sbjct: 1 MEVKGEIYRVAGPVVTAIGLD-AKMYDLCKVGNEGLMGEVIQIVGDKTIIQVYEETGGVR 59
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
PGEP + TG SL+VELGPGLL+SIYDG+QRPL V+ E+TG FI RGVTA L K W F
Sbjct: 60 PGEPCVTTGMSLAVELGPGLLSSIYDGLQRPLHVLLERTGGFIGRGVTADGLDHKKLWEF 119
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
P VK GD V+GGD+IG V ET I HKIM+PP I G + +I G +T+ + I +
Sbjct: 120 KPVVKKGDGVIGGDVIGVVQETVNIEHKIMLPPDISGTVSDI-RSGSFTVVDTICTLT-- 176
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
E EL+M QRWPVR RP K KL PE PL+TGQR++D FP AKGGTAAIPGPFGSGK
Sbjct: 177 --EGPELQMMQRWPVRKPRPVKRKLTPEKPLVTGQRILDGLFPVAKGGTAAIPGPFGSGK 234
Query: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
V L + ++ +Y +G + + E+ ELE P T
Sbjct: 235 TVTQQQLSKWSDTEIV----VYIGCGERGNEMADVLWEFPELEEPQT 277
>sp|P22662|ATPA_METBA ATP SYNTHASE ALPHA CHAIN >gi|80984|pir||A34283 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Methanosarcina
barkeri >gi|149820|gb|AAA72215.1| (J04836) ATPase alpha
subunit [Methanosarcina barkeri]
Length = 578
Score = 452 bits (1151), Expect = e-126
Identities = 217/343 (63%), Positives = 280/343 (81%), Gaps = 3/343 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ LAKWSD ++V+YIGCGERGNEM DVL EFP+L+DP+TG+PLMERTVLIANTSNM
Sbjct: 235 TVTQQSLAKWSDTEIVVYIGCGERGNEMADVLSEFPELEDPQTGRPLMERTVLIANTSNM 294
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTGITIAEY+RDMG DV+LMADSTSRWAEA+REIS RLEEMPGEEGYPAYL
Sbjct: 295 PVAAREASVYTGITIAEYYRDMGLDVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYL 354
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+++LAEFYERAG +L + GS++VIGAVSPPGGDFSEPV QNTLR+VKVFWALDA
Sbjct: 355 SARLAEFYERAGVAESLCGE--TGSITVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAK 412
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
L++RRHFPAINWL SYSLY D++ DW+ NV P++ +R++AME+LQ ESELQEIV++VG
Sbjct: 413 LSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVG 472
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALP+ ++ +L + RMLRE +LQQ+AF VD Y P ++Q +++ ++ + D M+A+
Sbjct: 473 SDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFDQQYKILKAIMKWGDAAMDALKS 532
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGK-IKALIDKTNEQFEEL 1011
GVP+ EI KL + + ++K+E + + A++ + +++F L
Sbjct: 533 GVPVTEIIKLESKNVLAKVKYEEKFDESMNAVLAQMDKEFASL 575
Score = 284 bits (719), Expect = 3e-75
Identities = 153/287 (53%), Positives = 193/287 (66%), Gaps = 10/287 (3%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
M KG I RV+GP+V A G++ AKMY++V+VG GL+GE+I++ G K +IQVYEETAG++
Sbjct: 1 MEVKGEIYRVSGPVVTAIGLQ-AKMYDLVKVGNEGLMGEVIQILGPKTIIQVYEETAGIK 59
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
PGEP + TGSSLSVELGPGLL+SIYDG+QRPL V+ EK G FI RGV+A L K W F
Sbjct: 60 PGEPCVSTGSSLSVELGPGLLSSIYDGVQRPLHVLLEKMGSFIQRGVSADGLDHKKLWDF 119
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
P VK GD V GGD+IG V ET I HKIMVPP I G I +I + G +T+ + I +
Sbjct: 120 KPIVKKGDSVKGGDVIGVVQETVNIEHKIMVPPDISGTISDI-KSGNFTVVDTICTLTDG 178
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
+ EL+M QRWPVR RP K KL P PL+TG R++D FP AKGGTAAIPGPFGSGK
Sbjct: 179 T----ELQMMQRWPVRRPRPVKAKLTPTRPLVTGMRILDGLFPVAKGGTAAIPGPFGSGK 234
Query: 241 CVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
V +L + ++ +Y +G + + E+ ELE P T
Sbjct: 235 TVTQQSLAKWSDTEIV----VYIGCGERGNEMADVLSEFPELEDPQT 277
>pir||E72733 probable membrane-associated ATPase alpha chain APE0405 - Aeropyrum
pernix (strain K1) >gi|5104045|dbj|BAA79361.1| (AP000059)
598aa long hypothetical membrane-associated ATPase alpha
chain [Aeropyrum pernix]
Length = 598
Score = 446 bits (1135), Expect = e-124
Identities = 212/342 (61%), Positives = 272/342 (78%), Gaps = 9/342 (2%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVT H LA+WS+A+VVIYIGCGERGNEMT+VLE FP+ KDP TGKPLM+RTVLIANTSNM
Sbjct: 249 TVTLHSLAQWSEARVVIYIGCGERGNEMTEVLERFPQYKDPWTGKPLMDRTVLIANTSNM 308
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIY GITIAEY+RDMGYDV L+ADSTSRWAEALREI+GRLEEMP EEGYP+YL
Sbjct: 309 PVAAREASIYVGITIAEYYRDMGYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYL 368
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS+LAEFYERAGRV LGS R GSV+V+GAVSPPGGDFSEPV +T R ++VFWALD
Sbjct: 369 ASRLAEFYERAGRVKALGSPERSGSVTVVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTK 428
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RH+PAINWL SYS YVD V WWH+NVD W+ RD+AM++L +ESELQEIVR+VG
Sbjct: 429 LAYSRHYPAINWLMSYSAYVDLVTQWWHENVDKRWREYRDEAMDILLRESELQEIVRLVG 488
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
+ L E+++ +L AR++++ +L+Q+AFD +D + P+KQ +++++++ + K++E I +
Sbjct: 489 TEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLKMIMDIHRKSLELIEK 548
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEEL 1011
GV ++I + +GR+ + +KA N+Q E++
Sbjct: 549 GVTTQQIL-----QALGRLY----IDIVKAKFTIPNDQLEKI 581
Score = 317 bits (805), Expect = 3e-85
Identities = 161/292 (55%), Positives = 212/292 (72%), Gaps = 19/292 (6%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
+ KG I+R++GPLVVA+GM GA+MYE+V VGE LIGEI R+ GD+A IQVYE T+G++
Sbjct: 2 LAVKGSIVRISGPLVVAEGMSGAQMYEMVYVGEDRLIGEITRIRGDRAFIQVYESTSGLK 61
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-------FIARGVTAPALP 113
PGEPV+GTG+ LSVELGPGLL +IYDG+QRPL +I EK + F+ RG+ AP LP
Sbjct: 62 PGEPVVGTGAPLSVELGPGLLGTIYDGVQRPLPIIAEKVAEVDPRRRMFVERGIQAPPLP 121
Query: 114 RDKKWHFIPK-VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEE 172
RD+K+HF P+ +K GDKV GGD +G VPETS+I H +MVPPGI G + +A EG+Y++E+
Sbjct: 122 RDRKFHFKPEPLKEGDKVEGGDALGRVPETSLIEHVVMVPPGIRGRLKWLASEGDYSVED 181
Query: 173 VIAKVKTPSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAI 232
IA V+ ++ E++M+QRWPVR+ RP+KEKL P++PLITG R+IDTFFP AKGGT A+
Sbjct: 182 TIAVVERDGRDV-EIRMHQRWPVRIPRPFKEKLEPQLPLITGVRIIDTFFPMAKGGTGAV 240
Query: 233 PGPFGSGKCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELER 284
PG FG+GK V +L E ++ I G G++ GNE LER
Sbjct: 241 PGGFGTGKTVTLHSLAQWSEARVV-------IYIGCGER---GNEMTEVLER 282
>sp|Q48332|ATPA_HALVO ATP SYNTHASE ALPHA CHAIN >gi|629402|pir||S45144 H+-transporting ATP
synthase (EC 3.6.1.34) chain A [validated] - Haloferax
volcanii >gi|496904|emb|CAA56051.1| (X79516) membrane
ATPase [Haloferax volcanii] >gi|1098057|prf||2115218D
ATPase:SUBUNIT=alpha [Haloferax volcanii]
Length = 586
Score = 446 bits (1134), Expect = e-124
Identities = 219/344 (63%), Positives = 267/344 (76%), Gaps = 3/344 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKW+DA +V+Y+GCGERGNEMT+V+E+FP+L DPKTG PLM RT LIANTSNM
Sbjct: 245 TVTQHQLAKWADADIVVYVGCGERGNEMTEVIEDFPELDDPKTGNPLMARTCLIANTSNM 304
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+ IYTGITIAEY+RDMGYDVALMADSTSRWAEA+REIS RLEEMPGEEGYPAYL
Sbjct: 305 PVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYL 364
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
A++L+EFYERAG T+ + GSVSVIGAVSPPGGDFSEPV QNTLR+VK FWALDAD
Sbjct: 365 AARLSEFYERAGYFTTVNGE--EGSVSVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDAD 422
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RRHFPAINW SYSLY + + W+ +NV+ +W R A+++L +E+ELQEIV++VG
Sbjct: 423 LAERRHFPAINWNESYSLYQEQLDPWFVENVEDDWAEERQWAVDVLDEENELQEIVQLVG 482
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALPE ++ L +AR LRE YLQQ+AF DTYC PEK ++ + F D+ +A+
Sbjct: 483 KDALPEDQQLTLEIARYLREAYLQQNAFHPTDTYCSPEKTYGILTAIHAFNDEAFKALEA 542
Query: 970 GVPLEEIAKLPVREEIGRMKFEPD-VGKIKALIDKTNEQFEELF 1012
GVP+EEI + + R+ + D I+ L + EQ EL+
Sbjct: 543 GVPVEEIQAIEAAPRLNRIGVQEDWEAYIEDLKAEITEQLRELY 586
Score = 260 bits (658), Expect = 5e-68
Identities = 139/284 (48%), Positives = 184/284 (63%), Gaps = 10/284 (3%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I V+GP+V A G+ A+M +VV VG+ GL+GE+I +EGD IQVYEET+GV PGEP
Sbjct: 13 GVIASVSGPVVTARGLD-ARMNDVVYVGDEGLMGEVIEIEGDLTTIQVYEETSGVGPGEP 71
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V TG L+V+LGPG++ +IYDG+QRPL+V+ K F+ RGV AP + D+KW F P
Sbjct: 72 VESTGEPLTVDLGPGMMDAIYDGVQRPLDVLESKMDSAFLDRGVDAPGIDLDEKWEFEPT 131
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
V GD+V GD++G VPET I HK+MVPP G V EEGE+++ E + V+ SGE
Sbjct: 132 VSEGDEVAPGDVVGTVPETVTIEHKVMVPPDFGGGEVVAVEEGEFSVTEAV--VELDSGE 189
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
E+ M+Q WPVR RP EK P PL++GQR++D FP AKGGTAAIPGPFGSGK V
Sbjct: 190 --EITMHQEWPVRQARPAAEKKTPREPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVT 247
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
L + ++ +Y +G + E++ EL+ P T
Sbjct: 248 QHQLAKWADADIV----VYVGCGERGNEMTEVIEDFPELDDPKT 287
>sp|P09639|ATPA_SULAC MEMBRANE-ASSOCIATED ATP SYNTHASE ALPHA CHAIN (SUL-ATPASE ALPHA)
>gi|81110|pir||A28652 H+-transporting ATP synthase (EC
3.6.1.34) alpha chain, membrane-associated - Sulfolobus
acidocaldarius >gi|152927|gb|AAA72192.1| (J03218) ATPase
alpha subunit [Sulfolobus acidocaldarius]
Length = 592
Score = 440 bits (1119), Expect = e-122
Identities = 203/350 (58%), Positives = 273/350 (78%), Gaps = 5/350 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVT LAKWS A+VVIY+GCGERGNEMTD L FPKLKDP TGKPL+ RT+L+ANTSNM
Sbjct: 241 TVTLQSLAKWSAAKVVIYVGCGERGNEMTDELRSFPKLKDPWTGKPLLLRTILVANTSNM 300
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+SIY G+T+AEYFRD GYDV L+ADSTSRWAEALR++ GR+EEMP EEG+P+YL
Sbjct: 301 PVAARESSIYVGVTMAEYFRDQGYDVLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYL 360
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S+LAE+YERAGRV+ LG+ R GSV++ AVSPPGGDF+EPV NTLR V+VFW LD
Sbjct: 361 PSRLAEYYERAGRVIALGNPERYGSVTIASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVS 420
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA+ RH+PAINW+ +S YVD V WWHKNVDP WK MRD M++L +E EL++IVR+VG
Sbjct: 421 LAQARHYPAINWIQGFSAYVDLVAQWWHKNVDPNWKEMRDTMMKVLIREDELRQIVRLVG 480
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
P+ L E+++ +L A+++++ +L+++A+D++D + P+KQV +MR++ FY+++ + IS+
Sbjct: 481 PEELAEKDKLVLEAAKLIKDAFLKENAYDDIDAFSSPQKQVRIMRLIYIFYNQSQDLISK 540
Query: 970 GVPLEEIAKL--PVREEIGRMKF---EPDVGKIKALIDKTNEQFEELFKK 1014
GVPL++I P+ EI R+K+ ++ KI + +K F+ L K+
Sbjct: 541 GVPLKKILDKVGPIEPEIIRIKYTIKNDELNKIDEIENKLKATFDSLLKE 590
Score = 311 bits (788), Expect = 3e-83
Identities = 149/243 (61%), Positives = 189/243 (77%), Gaps = 2/243 (0%)
Query: 1 MVAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
MV++GR++RV GPLV+ADGM+ A+M+EVV V +L L+GEI R+EGD+A IQVYE T GV+
Sbjct: 1 MVSEGRVVRVNGPLVIADGMREAQMFEVVYVSDLKLVGEITRIEGDRAFIQVYESTDGVK 60
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLE-VIREKTGDFIARGVTAPALPRDKKWH 119
PG+ V +G+ LSVELGPGL+ IYDG+QRPL+ + + F+ARGV+ PAL R KWH
Sbjct: 61 PGDKVYRSGAPLSVELGPGLIGKIYDGLQRPLDSIAKVSNSPFVARGVSIPALDRQTKWH 120
Query: 120 FIPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKT 179
F+PKVK GDKV GDIIG V ET +I H+I++PP + G + E+A EG+YT+E+V+A V
Sbjct: 121 FVPKVKSGDKVGPGDIIGVVQETDLIEHRILIPPNVHGTLKELAREGDYTVEDVVAVVDM 180
Query: 180 PSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSG 239
EI +KMYQ+WPVR+ RPYKEKL P PL+TG RV+DT FP AKGGTAAIPGPFGSG
Sbjct: 181 NGDEI-PVKMYQKWPVRIPRPYKEKLEPVEPLLTGIRVLDTVFPIAKGGTAAIPGPFGSG 239
Query: 240 KCV 242
K V
Sbjct: 240 KTV 242
>pir||A56812 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain [validated] -
Thermus aquaticus >gi|49048|emb|CAA45340.1| (X63855)
ATPase alpha-subunit [Thermus thermophilus]
>gi|1510118|dbj|BAA09873.1| (D63799) vacuolar type ATP
synthase subunit [Thermus thermophilus]
Length = 585
Score = 438 bits (1115), Expect = e-121
Identities = 214/344 (62%), Positives = 268/344 (77%), Gaps = 3/344 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ LAKWS+A VV+Y+GCGERGNEMTDVL EFP+L DPKTG PLM RTVLIANTSNM
Sbjct: 235 TVTQQSLAKWSNADVVVYVGCGERGNEMTDVLVEFPELTDPKTGGPLMHRTVLIANTSNM 294
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIY G+TIAEYFRD G+ VALMADSTSRWAEALREIS RLEEMP EEGYP YL
Sbjct: 295 PVAAREASIYVGVTIAEYFRDQGFSVALMADSTSRWAEALREISSRLEEMPAEEGYPPYL 354
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
A++LA FYERAG+V+TLG + G+V+++GAVSPPGGD SEPV Q+TLR+V FW LDA
Sbjct: 355 AARLAAFYERAGKVITLGGE--EGAVTIVGAVSPPGGDMSEPVTQSTLRIVGAFWRLDAS 412
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RRHFPAINW SYSL+ A+ W+ +NV ++ +RD ELLQ+E+ LQEIV++VG
Sbjct: 413 LAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVG 472
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDAL + ER ++ V R++RED+LQQ+A+ EVD YC +K +M+++L FY + AI R
Sbjct: 473 PDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKR 532
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFK 1013
GV ++EI +LPV E IGR ++ + + A ++ ++ + FK
Sbjct: 533 GVSIDEILQLPVLERIGRARYVSE-EEFPAYFEEAMKEIQGAFK 575
Score = 283 bits (716), Expect = 8e-75
Identities = 144/284 (50%), Positives = 189/284 (65%), Gaps = 9/284 (3%)
Query: 4 KGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGE 63
+G I ++ GP V+A GM GA+MY++ +VGE GL+GEIIRL+GD A +QVYE+T+G++ GE
Sbjct: 3 QGVIQKIAGPAVIAKGMLGARMYDICKVGEEGLVGEIIRLDGDTAFVQVYEDTSGLKVGE 62
Query: 64 PVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPK 123
PV+ TG L+VELGPG+L IYDGIQRPLE IREKTG +I RGV AL R+KKW + P
Sbjct: 63 PVVSTGLPLAVELGPGMLNGIYDGIQRPLERIREKTGIYITRGVVVHALDREKKWAWTPM 122
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
VK GD+V GG ++G VPE THKI+VPP + G + E+ GEYT+EE + ++ +
Sbjct: 123 VKPGDEVRGGMVLGTVPEFG-FTHKILVPPDVRGRVKEVKPAGEYTVEEPVVVLEDGT-- 179
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
ELKMY WPVR RP + KL P P +TG R++D FP A GGTAAIPGPFGSGK V
Sbjct: 180 --ELKMYHTWPVRRARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKTVT 237
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
+L ++ +Y +G + + E+ EL P T
Sbjct: 238 QQSLAKWSNADVV----VYVGCGERGNEMTDVLVEFPELTDPKT 277
>sp|Q08636|NTPA_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT A (NA(+)-TRANSLOCATING ATPASE
SUBUNIT A) >gi|421413|pir||A46733 Na+-transporting ATPase
(EC 3.6.1.-) chain A - Enterococcus hirae
>gi|868004|dbj|BAA04275.1| (D17462) Na+ -ATPase subunit A
[Enterococcus hirae] >gi|912449|dbj|BAA02969.1| (D13816)
Na+ -ATPase alpha subunit [Enterococcus hirae]
Length = 593
Score = 437 bits (1113), Expect = e-121
Identities = 216/343 (62%), Positives = 267/343 (76%), Gaps = 4/343 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QHQ+AKWSD +V+Y+GCGERGNEMTDV+ EFP+L DP TG+ LMERTVLIANTSNM
Sbjct: 239 TVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGESLMERTVLIANTSNM 298
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGITIAEYFRDMGYDVA+MADSTSRWAEALRE+SGRLEEMPG+EGYPAYL
Sbjct: 299 PVAAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYL 358
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S+LAE+YER+GRV+ LGSD R GS++ I AVSP GGD SEPV QNTLRVVKVFW LD+
Sbjct: 359 GSRLAEYYERSGRVIALGSDQREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSS 418
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA++RHFP+INW+ SYSLY V + + + +W M + M +LQ+E +L EIVR+VG
Sbjct: 419 LAQKRHFPSINWIQSYSLYSTEVGRYMDQILQQDWSDMVTEGMRILQEEEQLNEIVRLVG 478
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
D+L + +R L VA+ +REDYLQQ+AFD+VDT+ EKQ M++V+L F + +A+S
Sbjct: 479 IDSLSDNDRLTLEVAKSIREDYLQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSL 538
Query: 970 GVPLEEIAK--LPVREEIGRMKFEPDVGKIKALIDKTNEQFEE 1010
G EI + + VRE I R K+ P+ + A I NE+ +E
Sbjct: 539 GAYFNEIMEGTVAVRERISRSKYIPE--EELAKISSINEEIKE 579
Score = 271 bits (685), Expect = 3e-71
Identities = 143/284 (50%), Positives = 193/284 (67%), Gaps = 7/284 (2%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+II+V+GPLV+A+ M A + ++ VG+LG+IGEII + D A IQVYEET+G+ PGEP
Sbjct: 4 GKIIKVSGPLVMAENMSEASIQDMCLVGDLGVIGEIIEMRQDVASIQVYEETSGIGPGEP 63
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPK 123
V TG +LSVELGPG+++ ++DGIQRPL+ E T +F+ RGV PAL +K+W F
Sbjct: 64 VRSTGEALSVELGPGIISQMFDGIQRPLDTFMEVTQSNFLGRGVQLPALDHEKQWWFEAT 123
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
++ G +V GDIIG V ET II HKIMVP GI+G + +I E G +TI++ I ++T G
Sbjct: 124 IEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI-ESGSFTIDDPICVIETEQG- 181
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+KEL M Q+WPVR RP K+KL P+VP+ITGQRVIDTFFP KGG AA+PGPFG+GK V
Sbjct: 182 LKELTMMQKWPVRRGRPIKQKLNPDVPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTVV 241
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
+ + L+ +Y +G + + E+ EL P T
Sbjct: 242 QHQIAKWSDVDLV----VYVGCGERGNEMTDVVNEFPELIDPNT 281
>gb|AAG20277.1| (AE005102) H+-transporting ATP synthase subunit A; AtpA
[Halobacterium sp. NRC-1]
Length = 556
Score = 432 bits (1098), Expect = e-119
Identities = 211/346 (60%), Positives = 262/346 (74%), Gaps = 5/346 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ LAK++DA +V+YIGCGERGNEMT+V+E+FP+L DP+TG PLM RT LIANTSNM
Sbjct: 213 TVTQQSLAKFADADIVVYIGCGERGNEMTEVIEDFPELPDPQTGNPLMARTTLIANTSNM 272
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+ IYTGITIAEY+RDMGYDVALMADSTSRWAEA+REIS RLEEMPGEEGYPAYL
Sbjct: 273 PVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYL 332
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
A++L+EFYERAG GS+SVIGAVSPPGGDFSEPV QNTLR+VK FWALD+D
Sbjct: 333 AARLSEFYERAGYFENFNG--TEGSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSD 390
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RRHFPAINW SYSLY D + W+ NV +W R A+++L +ESEL+EIV++VG
Sbjct: 391 LAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVG 450
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALPE ++ L VAR +RE +LQQ+A +VD YCPPEK ++ + ++++ EA+
Sbjct: 451 KDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDA 510
Query: 970 GVPLEEIAKLPVREEIGRMKFEPD---VGKIKALIDKTNEQFEELF 1012
GVP+EEI + + R+ PD ++ + + EQ EL+
Sbjct: 511 GVPVEEITSIDAAPRLNRLGTTPDDEHEAEVAEIKQQITEQLRELY 556
Score = 245 bits (618), Expect = 2e-63
Identities = 123/263 (46%), Positives = 173/263 (65%), Gaps = 8/263 (3%)
Query: 25 MYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEPVIGTGSSLSVELGPGLLTSI 84
M +VV VG+ GL+GE+I +EGD IQVYEET+G+ PG+PV TG L+V+LGPG+L SI
Sbjct: 1 MNDVVYVGDEGLMGEVIEIEGDVTTIQVYEETSGIGPGQPVDNTGEPLTVDLGPGMLDSI 60
Query: 85 YDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKVKVGDKVVGGDIIGEVPETSI 144
YDG+QRPL+V+ ++ G F+ RGV AP + D W F P V+ GD+V GD++G V ET
Sbjct: 61 YDGVQRPLDVLEDEMGAFLDRGVDAPGIDLDTDWEFEPTVEAGDEVAAGDVVGTVDETVS 120
Query: 145 ITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEK 204
I HK++VPP +G V E G +T+++ + ++ T GE E++M+Q WPVR +RP +K
Sbjct: 121 IEHKVLVPPRSDGGEVVAVESGTFTVDDTVVELDT--GE--EIQMHQEWPVRRQRPTVDK 176
Query: 205 LPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTLVLTKEFGLIKIKDLYKI 264
P PL++GQR++D FP AKGGTAAIPGPFGSGK V +L + ++ +Y
Sbjct: 177 QTPTEPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQQSLAKFADADIV----VYIG 232
Query: 265 LDGKGKKTVNGNEEWTELERPIT 287
+G + E++ EL P T
Sbjct: 233 CGERGNEMTEVIEDFPELPDPQT 255
>sp|P25163|ATPA_HALSA ATP SYNTHASE ALPHA CHAIN >gi|81070|pir||S14732 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain [validated] -
Halobacterium salinarum >gi|43640|emb|CAA49775.1|
(X70294) ATP synthase subunit [Halobacterium salinarum]
Length = 585
Score = 431 bits (1097), Expect = e-119
Identities = 210/346 (60%), Positives = 261/346 (74%), Gaps = 5/346 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ LAK++DA +V+YIGCGERGNEMT+V+E+FP+L DP+TG PLM RT LIANTSNM
Sbjct: 242 TVTQQSLAKFADADIVVYIGCGERGNEMTEVIEDFPELPDPQTGNPLMARTTLIANTSNM 301
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVA RE+ IYTGITIAEY+RDMGYDVALMADSTSRWAEA+REIS RLEEMPGEEGYPAYL
Sbjct: 302 PVAGRESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYL 361
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
A++L+EFYERAG GS+SVIGAVSPPGGDFSEPV QNTLR+VK FWALD+D
Sbjct: 362 AARLSEFYERAGYFENFNG--TEGSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSD 419
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RRHFPAINW SYSLY D + W+ NV +W R A+++L +ESEL+EIV++VG
Sbjct: 420 LAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQSAVDILDEESELEEIVQLVG 479
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
DALPE ++ L VAR +RE +LQQ+A +VD YCPPEK ++ + ++++ EA+
Sbjct: 480 KDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDA 539
Query: 970 GVPLEEIAKLPVREEIGRMKFEPD---VGKIKALIDKTNEQFEELF 1012
GVP+EEI + + R+ PD ++ + + EQ EL+
Sbjct: 540 GVPVEEITSIDAAPRLNRLGTTPDDEHEAEVAEIKQQITEQLRELY 585
Score = 257 bits (650), Expect = 4e-67
Identities = 132/283 (46%), Positives = 186/283 (65%), Gaps = 9/283 (3%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I V+GP+V A G+ A+M +VV VG+ GL+GE+I +EGD IQVYEET+G+ PG+P
Sbjct: 11 GEIESVSGPVVTATGLD-AQMNDVVYVGDEGLMGEVIEIEGDVTTIQVYEETSGIGPGQP 69
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKV 124
V TG L+V+LGPG+L SIYDG+QRPL+V+ ++ G F+ RGV AP + D W F P V
Sbjct: 70 VDNTGEPLTVDLGPGMLDSIYDGVQRPLDVLEDEMGAFLDRGVDAPGIDLDTDWEFEPTV 129
Query: 125 KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEI 184
+ GD+V GD++G V ET I HK++VPP +G V E G +T+++ + ++ T GE
Sbjct: 130 EAGDEVAAGDVVGTVDETVSIEHKVLVPPRSDGGEVVAVESGTFTVDDTVVELDT--GE- 186
Query: 185 KELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDG 244
E++M+Q WPVR +RP +K P PL++GQR++D FP AKGGTAAIPGPFGSGK V
Sbjct: 187 -EIQMHQEWPVRRQRPTVDKQTPTEPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQ 245
Query: 245 DTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
+L + ++ +Y +G + E++ EL P T
Sbjct: 246 QSLAKFADADIV----VYIGCGERGNEMTEVIEDFPELPDPQT 284
>emb|CAB57737.1| (Y18930) atpase alpha chain (membrane-associated) [Sulfolobus
solfataricus]
Length = 592
Score = 417 bits (1061), Expect = e-115
Identities = 198/347 (57%), Positives = 267/347 (76%), Gaps = 10/347 (2%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVT LAKWS A++VIY+GCGERGNEMTD L +FP LKDP TG+PL+ERT+L+ANTSNM
Sbjct: 240 TVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWTGRPLLERTILVANTSNM 299
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIY GIT+AEYFRD GYD L+ADSTSRWAEALR++ GR+EEMP EEG+P+YL
Sbjct: 300 PVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYL 359
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S+LAE+YERAGRV T+G+ R GSV+V AVSPPGGDF+EPV TLR VKVFW LD
Sbjct: 360 PSRLAEYYERAGRVKTIGNPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVS 419
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA+ RH+PAINWL +S YVD V +WW+ NVDP+W+ MRD + L +E EL++IVR+VG
Sbjct: 420 LAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVG 479
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
P++L E+++ IL AR+++E +L+Q+A+D++D + P+KQ +MR++ F + + R
Sbjct: 480 PESLAEKDKLILETARLIKEAFLKQNAYDDIDAFSSPQKQARIMRLIYLFNTYASKLVER 539
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALI--DKTNEQFEELFKK 1014
G+P ++I + +G++ P++ + KA I D+ N +++EL +K
Sbjct: 540 GIPTKKIV-----DSMGQLL--PEIIRSKAAIKNDELN-RYDELERK 578
Score = 304 bits (770), Expect = 4e-81
Identities = 157/281 (55%), Positives = 201/281 (70%), Gaps = 12/281 (4%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRI+R+ GPLVVAD M+ A+MYEVV VGE LIGEI R+EGD+A IQVYE+T+G++P EP
Sbjct: 4 GRIVRINGPLVVADNMRNAQMYEVVEVGEPRLIGEITRIEGDRAFIQVYEDTSGIKPNEP 63
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPK 123
V TG+ LS+ELGPGL+ I+DG+QRPL+ I+E T FIARG+ P++ R KWHF+PK
Sbjct: 64 VYRTGAPLSIELGPGLIGKIFDGLQRPLDSIKELTKSPFIARGIKVPSIDRKTKWHFVPK 123
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
VK GDKV GG IIG V ET ++ H+I+VPP + G + E+ EG+YT+E+ IA V E
Sbjct: 124 VKKGDKVEGGSIIGIVNETPLVEHRILVPPYVHGTLKEVVAEGDYTVEDPIAIVDMNGDE 183
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+ +K+ Q+WPVR+ RP+KEKL P PL+TG RV+DT FP AKGGTAAIPGPFGSGK V
Sbjct: 184 V-PVKLMQKWPVRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTV- 241
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELER 284
TL ++ KI I G G++ GNE EL +
Sbjct: 242 --TLQSLAKWSAAKI----VIYVGCGER---GNEMTDELRQ 273
>gb|AAK40879.1| ATP synthase subunit A (atpA) [Sulfolobus solfataricus]
Length = 592
Score = 417 bits (1061), Expect = e-115
Identities = 198/347 (57%), Positives = 267/347 (76%), Gaps = 10/347 (2%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVT LAKWS A++VIY+GCGERGNEMTD L +FP LKDP TG+PL+ERT+L+ANTSNM
Sbjct: 240 TVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWTGRPLLERTILVANTSNM 299
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIY GIT+AEYFRD GYD L+ADSTSRWAEALR++ GR+EEMP EEG+P+YL
Sbjct: 300 PVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYL 359
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S+LAE+YERAGRV T+G+ R GSV+V AVSPPGGDF+EPV TLR VKVFW LD
Sbjct: 360 PSRLAEYYERAGRVKTIGNPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVS 419
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA+ RH+PAINWL +S YVD V +WW+ NVDP+W+ MRD + L +E EL++IVR+VG
Sbjct: 420 LAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVG 479
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
P++L E+++ IL AR+++E +L+Q+A+D++D + P+KQ +MR++ F + + R
Sbjct: 480 PESLAEKDKLILETARLIKEAFLKQNAYDDIDAFSSPQKQARIMRLIYLFNTYASKLVER 539
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALI--DKTNEQFEELFKK 1014
G+P ++I + +G++ P++ + KA I D+ N +++EL +K
Sbjct: 540 GIPTKKIV-----DSMGQLL--PEIIRSKAAIKNDELN-RYDELERK 578
Score = 304 bits (770), Expect = 4e-81
Identities = 157/281 (55%), Positives = 201/281 (70%), Gaps = 12/281 (4%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRI+R+ GPLVVAD M+ A+MYEVV VGE LIGEI R+EGD+A IQVYE+T+G++P EP
Sbjct: 4 GRIVRINGPLVVADNMRNAQMYEVVEVGEPRLIGEITRIEGDRAFIQVYEDTSGIKPNEP 63
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPK 123
V TG+ LS+ELGPGL+ I+DG+QRPL+ I+E T FIARG+ P++ R KWHF+PK
Sbjct: 64 VYRTGAPLSIELGPGLIGKIFDGLQRPLDSIKELTKSPFIARGIKVPSIDRKTKWHFVPK 123
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
VK GDKV GG IIG V ET ++ H+I+VPP + G + E+ EG+YT+E+ IA V E
Sbjct: 124 VKKGDKVEGGSIIGIVNETPLVEHRILVPPYVHGTLKEVVAEGDYTVEDPIAIVDMNGDE 183
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+ +K+ Q+WPVR+ RP+KEKL P PL+TG RV+DT FP AKGGTAAIPGPFGSGK V
Sbjct: 184 V-PVKLMQKWPVRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTV- 241
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELER 284
TL ++ KI I G G++ GNE EL +
Sbjct: 242 --TLQSLAKWSAAKI----VIYVGCGER---GNEMTDELRQ 273
>pir||C71313 probable V-type ATPase, subunit A (atpA-2) - syphilis spirochete
>gi|3322821|gb|AAC65516.1| (AE001228) V-type ATPase,
subunit A (atpA-2) [Treponema pallidum]
Length = 605
Score = 416 bits (1058), Expect = e-115
Identities = 202/345 (58%), Positives = 263/345 (75%), Gaps = 6/345 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
T+TQH +AKW DA +++YIGCGERGNEMTDVL EFPKL DP+TG+ LMERT+LIANTSNM
Sbjct: 249 TMTQHAVAKWCDADIIVYIGCGERGNEMTDVLSEFPKLIDPRTGRSLMERTILIANTSNM 308
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PV+ARE S+Y+GIT+AEY+RDMG VA+MADSTSRWAEALRE+SGR+EEMP EEG+PAYL
Sbjct: 309 PVSAREVSLYSGITLAEYYRDMGMHVAIMADSTSRWAEALRELSGRMEEMPAEEGFPAYL 368
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
++LAEFYERAGRV T + R GSVS+IGAVSP GGDFSEPV Q+T R ++ FWALD +
Sbjct: 369 PTRLAEFYERAGRVETCVA--REGSVSIIGAVSPLGGDFSEPVTQHTKRFIRCFWALDRE 426
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA RH+PAI W+ SYS Y V WW K DP A+R A++LL+KE LQ+IVR+VG
Sbjct: 427 LAHARHYPAIGWIDSYSEYAQEVSAWWSK-YDPRAGALRAAALDLLRKEQRLQQIVRLVG 485
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDALP +R +L+V M++ +LQQ+AFD D + PEKQV ++R +++F+++ + +
Sbjct: 486 PDALPGEDRLVLMVCEMIKGGFLQQNAFDPTDVFSCPEKQVQILRTIVDFHERAVVLLRA 545
Query: 970 GVPLEEIAKLPVREEIGRMKF---EPDVGKIKALIDKTNEQFEEL 1011
G+ L +++L RE I RMK DV K++ + D +F++L
Sbjct: 546 GISLSALSQLSCRELIVRMKTTYGNEDVHKMQKVYDTMCTEFDQL 590
Score = 216 bits (545), Expect = 9e-55
Identities = 118/247 (47%), Positives = 152/247 (60%), Gaps = 12/247 (4%)
Query: 2 VAKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRP 61
V GR++RV+GP+V A+G+ +Y+VV VGE LIGEIIRL+ KAV+QVYE+ G+R
Sbjct: 6 VVTGRVVRVSGPIVYAEGLSACSVYDVVDVGEASLIGEIIRLDESKAVVQVYEDDTGMRV 65
Query: 62 GEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFI 121
GE V LSV LGPGL+ +IYDGIQRPLE + ++ G F+ G + L +W F
Sbjct: 66 GEKVTSLRRPLSVRLGPGLIGTIYDGIQRPLERLFQEDGAFLRPGARSQPLDGSVRWDFR 125
Query: 122 PKVK-------VGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIV-EIAEEGEYTIEEV 173
P G + G ++G V ET + H IMVPP I G ++ G YTI+E
Sbjct: 126 PHCNERGEALCAGIPIAPGSVLGTVQETPSVVHTIMVPPDIRGSVLSSFKGAGAYTIDEE 185
Query: 174 IAKVKTPSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIP 233
I +T GE L + Q WPVR RP+ +KL PL+TGQR ID FFP +KGGTAAIP
Sbjct: 186 IG--RTDLGE--PLFLSQYWPVRRARPFSKKLAVCEPLVTGQRAIDVFFPLSKGGTAAIP 241
Query: 234 GPFGSGK 240
G FG+GK
Sbjct: 242 GGFGTGK 248
>pir||A75488 v-type ATP synthase, A subunit - Deinococcus radiodurans (strain R1)
>gi|6458405|gb|AAF10278.1|AE001926_10 (AE001926) v-type
ATP synthase, A subunit [Deinococcus radiodurans]
Length = 582
Score = 412 bits (1047), Expect = e-113
Identities = 201/344 (58%), Positives = 256/344 (73%), Gaps = 3/344 (0%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQ +AK+ +A +V+Y+GCGERGNEMTDVL EFP+L+DPKTG PLM RT+LIANTSNM
Sbjct: 238 TVTQQSVAKYGNADIVVYVGCGERGNEMTDVLVEFPELEDPKTGGPLMHRTILIANTSNM 297
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTG+T+AEYFRD GY V+LMADSTSRWAEALREIS RLEEMP EEGYP YL
Sbjct: 298 PVAAREASVYTGVTLAEYFRDQGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYL 357
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+KLA FYERAG V TL + G+VSVIGAVSP GGD SEPV Q TLR+ FW LDA
Sbjct: 358 GAKLAAFYERAGAVKTLAGE--DGAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAG 415
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LARRRHFPAINW SYSL+ + W+ +NV P++ +R + LLQ+E+ LQE+V++VG
Sbjct: 416 LARRRHFPAINWNGSYSLFTPILDKWYRENVGPDFPELRQRIGSLLQQEAALQEVVQLVG 475
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
PDAL + ER I+ RMLR+D+LQQ+ FD VD K +M++ L FYD+ A+
Sbjct: 476 PDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMKMFLKFYDEAEAALRN 535
Query: 970 GVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFK 1013
G+ ++EI + PV E++ R ++ P+ + A + ++ ++ FK
Sbjct: 536 GLTIDEIIQNPVIEKLARARYTPE-NEFMAYGEGVMDELDQTFK 578
Score = 270 bits (683), Expect = 6e-71
Identities = 137/284 (48%), Positives = 189/284 (66%), Gaps = 9/284 (3%)
Query: 4 KGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGE 63
+G + + GP V+A GM GAKMY++VRVG+ L+GEIIRL+GD A +QVYE+TAG+ GE
Sbjct: 6 QGVVQSIAGPAVIAKGMYGAKMYDIVRVGQERLVGEIIRLDGDTAFVQVYEDTAGLTVGE 65
Query: 64 PVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPK 123
PV TG LSVELGPG+L IYDGIQRPL+ IRE +G+FIARG+ +L R++KW F P
Sbjct: 66 PVETTGLPLSVELGPGMLNGIYDGIQRPLDKIREASGNFIARGIEVSSLNREQKWDFTPS 125
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
V+ GD V G I+G VPE S THKI+VPP ++G + +A G+YTI++ IA+++ +
Sbjct: 126 VQAGDTVTGSGILGTVPEFS-FTHKILVPPEVQGRLRSVAPAGQYTIDDTIAELEDGT-- 182
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+L++ WPVR RP ++KL P +P +TG R++D FP GG AAIPGPFGSGK V
Sbjct: 183 --KLRLAHYWPVRAPRPVQKKLDPSLPFLTGMRILDVMFPLVMGGAAAIPGPFGSGKTVT 240
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
++ ++ +Y +G + + E+ ELE P T
Sbjct: 241 QQSVAKYGNADIV----VYVGCGERGNEMTDVLVEFPELEDPKT 280
>gb|AAF53231.1| (AE003638) CG3762 gene product [alt 1] [Drosophila melanogaster]
>gi|7297990|gb|AAF53232.1| (AE003638) CG3762 gene product
[alt 2] [Drosophila melanogaster]
>gi|7297991|gb|AAF53233.1| (AE003638) CG3762 gene product
[alt 3] [Drosophila melanogaster]
Length = 614
Score = 372 bits (944), Expect = e-101
Identities = 189/358 (52%), Positives = 259/358 (71%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 254 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTS 313
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 314 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 373
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 374 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 433
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ D++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 434 KKLAQRKHFPSINWLISYSKYMRALDDFYDKNF-PEFVPLRTKVKEILQEEEDLSEIVQL 492
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D +CP K V M+R +++FYD ++
Sbjct: 493 VGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLRNIIDFYDMARHSV 552
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
E +I +RE +G MKF+ V KIKA ++ +E ++ F+
Sbjct: 553 ESTAQSENKITWNVIREAMGNIMYQLSSMKFKDPVKDGEAKIKADFEQLHEDLQQAFR 610
Score = 248 bits (626), Expect = 3e-64
Identities = 128/245 (52%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GR+ V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 17 GRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDP 76
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL+ I E T +I +GV P+L R W F P
Sbjct: 77 VLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASWEFNPL 136
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
VKVG + GGD+ G V E +++ HK++V P +G + IA G Y +++V+ + + G
Sbjct: 137 NVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEF-DG 195
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
EI + M Q WPVR RP EKLP PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 196 EITKHTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 255
Query: 243 DGDTL 247
L
Sbjct: 256 ISQAL 260
>gb|AAB02270.1| (U59146) vacuolar ATPase subunit A [Drosophila melanogaster]
>gi|1373435|gb|AAB02271.1| (U59147) vacuolar ATPase
subunit A [Drosophila melanogaster]
Length = 614
Score = 371 bits (942), Expect = e-101
Identities = 189/358 (52%), Positives = 259/358 (71%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 254 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTS 313
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 314 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPRDSGYPA 373
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 374 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 433
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ D++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 434 KKLAQRKHFPSINWLISYSKYMRALDDFYDKNF-PEFVPLRTKVKEILQEEEDLSEIVQL 492
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D +CP K V M+R +++FYD ++
Sbjct: 493 VGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLRNIIDFYDMARHSV 552
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
E +I +RE +G MKF+ V KIKA ++ +E ++ F+
Sbjct: 553 ESTAQSENKITWNVIREAMGNIMYQLSSMKFKDPVKDGEAKIKADFEQLHEDLQQAFR 610
Score = 245 bits (619), Expect = 2e-63
Identities = 127/245 (51%), Positives = 164/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GR+ V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 17 GRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDP 76
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL+ I E T +I +GV P+L R W F P
Sbjct: 77 VLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASWEFNPL 136
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
VKVG + GGD+ G V E +++ HK++V P +G + IA G Y +++V+ + + G
Sbjct: 137 NVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEF-DG 195
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
EI + M Q WPVR P EKLP PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 196 EITKHTMLQVWPVRHHAPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 255
Query: 243 DGDTL 247
L
Sbjct: 256 ISQAL 260
>gi|4502307 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha
polypeptide, 70kD, isoform 2 [Homo sapiens]
>gi|586208|sp|P38607|VAT0_HUMAN VACUOLAR ATP SYNTHASE
CATALYTIC SUBUNIT A, OSTEOCLAST ISOFORM (V-ATPASE 69 KD
SUBUNIT) (ISOFORM H068) >gi|1082431|pir||A46091
H+-transporting ATPase (EC 3.6.1.35) chain A, vacuolar
(HO68 type) - human >gi|291866|gb|AAA35578.1| (L09234)
ATPase [Homo sapiens]
Length = 615
Score = 369 bits (937), Expect = e-101
Identities = 188/358 (52%), Positives = 259/358 (71%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 255 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPQLSLEIDGVTESIMKRTALVANTS 314
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 315 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 374
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 375 YLGARLASFYERAGRVKCLGNPDREGSVSIVGAVSPPGGDFSDPVTTATLGIVQVFWGLD 434
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ D++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 435 KKLAQRKHFPSINWLISYSKYMRALDDFYDKNF-PEFVPLRTKVKEILQEEEDLSEIVQL 493
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D +CP K V M++ ++ FYD + A+
Sbjct: 494 VGKASLAETDKITLEVAKLLKDDFLQQNSYSPYDRFCPFYKTVGMLKNMIAFYDMSRHAV 553
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
E +I +R+ +G MKF+ V KIKA ++ +E ++ F+
Sbjct: 554 ESTAQSENKITWNVIRDSMGNILYQLSSMKFKDPVKDGEAKIKADFEQLHEDIQQAFR 611
Score = 252 bits (638), Expect = 1e-65
Identities = 127/245 (51%), Positives = 168/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYE+T+GV G+P
Sbjct: 18 GFVFAVSGPVVTAERMAGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEDTSGVTVGDP 77
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL+ I E + +I +GV PAL R +W F P
Sbjct: 78 VLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELSNSIYIPKGVNVPALSRTAQWDFSPV 137
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
VKVG + GGD+ G V E +++ HK+++PP +G + IAE G YT+++V+ + + G
Sbjct: 138 SVKVGSHITGGDLYGLVHENTLVKHKLLLPPRAKGTVTYIAEPGNYTVDDVVLETEF-DG 196
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
E + M Q WPVR RP EKLP PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 197 ERSKFTMLQVWPVRQPRPVTEKLPANYPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 256
Query: 243 DGDTL 247
+L
Sbjct: 257 ISQSL 261
>sp|O23654|VATA_ARATH VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KDA SUBUNIT)
>gi|2266990|gb|AAB97128.1| (U65638) vacuolar type ATPase
subunit A [Arabidopsis thaliana]
>gi|3834305|gb|AAC83021.1| (AC005679) Identical to
gb|U65638 Arabidopsis thaliana vacuolar type ATPase
subunit A mRNA. ESTs gb|N96435, gb|N96106, gb|N96189,
gb|N96091, gb|AA042286, gb|F14324, gb|W43643, gb|N96027,
gb|N96299, gb|R29943, gb|T43460, gb|T43544, gb|T22472,
gb|T14078>
Length = 623
Score = 368 bits (935), Expect = e-100
Identities = 187/354 (52%), Positives = 254/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP++ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSTALESFYEK-FDPDFINIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISR--GVPLEEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ R G+ ++I ++ +G + KFE L++K + +++L
Sbjct: 558 VERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDL 611
Score = 242 bits (612), Expect = 1e-62
Identities = 126/245 (51%), Positives = 162/245 (65%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLTVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVYIPRGVSVPALDKDCLWEFQPN 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K GD + GGD+ V E +++ H + +PP G+I IA G+Y++++ + +++ G
Sbjct: 142 KFVEGDTITGGDLYATVFENTLMNHLVALPPDAMGKITYIAPAGQYSLKDTVIELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 IKKSYTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>dbj|BAA87891.1| (AB004247) H+-ATPase catalytic subunit [Citrus unshiu]
Length = 623
Score = 368 bits (934), Expect = e-100
Identities = 187/354 (52%), Positives = 253/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ +++ DP++ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISRGVPL--EEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ +G + ++I ++ +G + KFE AL+ K + E+L
Sbjct: 558 VEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 611
Score = 246 bits (621), Expect = 1e-63
Identities = 124/245 (50%), Positives = 164/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+V+ADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVIADGMNGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I ++GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAIRSGDVYIPRGVSVPALDKDTLWEFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ GD + GGD+ V E S++ H + +PP G++ +A G+Y++++ + +++ G
Sbjct: 142 KIGEGDLLTGGDLYATVFENSLMQHHVALPPDAMGKVTYVAPAGQYSLKDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>sp|P09469|VATA_DAUCA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
>gi|67952|pir||PXPZV9 H+-transporting ATPase (EC
3.6.1.35), vacuolar, 69K chain - carrot
>gi|167560|gb|AAA33139.1| (J03769) vacular H+-ATPase
[Daucus carota]
Length = 623
Score = 367 bits (933), Expect = e-100
Identities = 191/361 (52%), Positives = 253/361 (69%), Gaps = 20/361 (5%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K D ++ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSTALESFYEK-FDSDFIDIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISRGVPL--EEIAKLPVREEIGRM-------KFEPD-------VGKIKALIDKTNEQFEE 1010
+ RG + ++I+ ++ +G + KFE VGK K L D F
Sbjct: 558 VERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRN 617
Query: 1011 L 1011
L
Sbjct: 618 L 618
Score = 248 bits (626), Expect = 3e-64
Identities = 126/245 (51%), Positives = 166/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ GD + GGD+ V E S++ H + +PP G+I +A G+Y++++ + +++ G
Sbjct: 142 KIGEGDLLTGGDLYATVFENSLMQHHVALPPDAMGKITYVAPAGQYSLKDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>sp|P31400|VATA_MANSE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|102967|pir||S21107
H+-transporting ATPase (EC 3.6.1.35) chain A, vacuolar -
tobacco hornworm >gi|11062|emb|CAA45537.1| (X64233)
H(+)-transporting ATPase [Manduca sexta]
Length = 617
Score = 367 bits (931), Expect = e-100
Identities = 188/358 (52%), Positives = 257/358 (71%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 257 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTVEIEGVTESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPDREGSVSIVGAVSPPGGDFSDPVTAATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ D++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSINWLISYSKYMRALDDFYEKNY-PEFVPLRTKVKEILQEEEDLSEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D +CP K V M++ +++FYD + A+
Sbjct: 496 VGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIISFYDMSRHAV 555
Query: 968 -SRGVPLEEIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
S ++ +R+ +G MKF+ V KIKA D+ E F+
Sbjct: 556 ESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEAKIKADFDQLLEDMSAAFR 613
Score = 246 bits (622), Expect = 8e-64
Identities = 127/245 (51%), Positives = 164/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 20 GYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDP 79
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG+L SI+DGIQRPL+ I E T +I +GV P+L R+ W F P
Sbjct: 80 VLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGVNVPSLAREVDWEFNPL 139
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
VKVG + GGD+ G V E +++ HK+++PP +G + IA G Y + +V+ + + G
Sbjct: 140 NVKVGSHITGGDLYGIVHENTLVKHKMLMPPRAKGTVTYIAPAGNYKVTDVVLETEF-DG 198
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
E + M Q WPVR RP EKLP PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 199 EKAQYTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 258
Query: 243 DGDTL 247
L
Sbjct: 259 ISQAL 263
>sp|Q39291|VATA_BRANA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(TONOPLAST ATPASE 70 KD SUBUNIT) (BN59)
>gi|1362024|pir||S57790 H+-transporting ATPase (EC
3.6.1.35) 70K chain, vacuolar (clone BN59) - rape
>gi|558479|gb|AAA82881.1| (U15604) tonoplast ATPase 70
kDa subunit [Brassica napus]
Length = 623
Score = 367 bits (931), Expect = e-100
Identities = 191/361 (52%), Positives = 253/361 (69%), Gaps = 20/361 (5%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K D ++ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSTALESFYEK-FDSDFIDIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISRGVPL--EEIAKLPVREEIGRM-------KFEPD-------VGKIKALIDKTNEQFEE 1010
+ RG + ++I+ ++ +G + KFE VGK K L D F
Sbjct: 558 VERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRN 617
Query: 1011 L 1011
L
Sbjct: 618 L 618
Score = 247 bits (624), Expect = 5e-64
Identities = 127/245 (51%), Positives = 165/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLTVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ PAL +D W F PK
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDCLWEFQPK 141
Query: 124 VKV-GDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
V GD + GGD+ V E S++ H + +PP G+I +A G+Y++++ + +++ G
Sbjct: 142 DFVEGDTITGGDLYATVFENSLMQHHVALPPDAMGKITYLAPAGQYSLKDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKSFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>dbj|BAB18682.1| (AB032840) vacuolar proton-ATPase [Hordeum vulgare]
Length = 621
Score = 366 bits (930), Expect = e-100
Identities = 190/354 (53%), Positives = 249/354 (69%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 257 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 316
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 317 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 376
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLAS+LA FYERAG+V LGS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 377 AYLASRLASFYERAGKVQCLGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 436
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP + MR KA E+LQ+E +L EIV+
Sbjct: 437 DKKLAQRKHFPSVNWLISYSKYSTALEGYYEK-FDPGFIDMRTKAREVLQREDDLNEIVQ 495
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D YCP K V MMR +++F +A
Sbjct: 496 LVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQA 555
Query: 967 ISRGVPLE--EIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ R + +I V+ +G + KFE L+ K + +++L
Sbjct: 556 VERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQKLYDDL 609
Score = 248 bits (626), Expect = 3e-64
Identities = 128/245 (52%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 20 GYVRKVSGPVVVADGMGGAAMYELVRVGHDSLIGEIIRLEGDSATIQVYEETAGLTVNDP 79
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LS ELGPG+L +I+DGIQRPL+ I K+GD +I RGV+ PAL +D+ W F P
Sbjct: 80 VLRTKKPLSCELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWEFQPN 139
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ VGD + GD+ V E +++ H I +PPG G+I IA G+Y++++ + +++ G
Sbjct: 140 KLGVGDNITNGDLYATVFENTLMKHHIALPPGAMGKISYIAPAGQYSLQDTVLELEF-QG 198
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
KE M WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 199 IKKEFTMLHTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 258
Query: 243 DGDTL 247
L
Sbjct: 259 ISQAL 263
>sp|Q40002|VATA_HORVU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
>gi|7436321|pir||T04409 probable H+-transporting ATPase
(EC 3.6.1.35) chain A, vacuolar - barley (fragment)
>gi|1051258|gb|AAB60306.1| (U36939) vacuolar ATPase
catalytic subunit [Hordeum vulgare]
Length = 580
Score = 366 bits (930), Expect = e-100
Identities = 190/354 (53%), Positives = 249/354 (69%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 216 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 275
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 276 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 335
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLAS+LA FYERAG+V LGS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 336 AYLASRLASFYERAGKVQCLGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 395
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP + MR KA E+LQ+E +L EIV+
Sbjct: 396 DKKLAQRKHFPSVNWLISYSKYSTALEGYYEK-FDPGFIDMRTKAREVLQREDDLNEIVQ 454
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D YCP K V MMR +++F +A
Sbjct: 455 LVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQA 514
Query: 967 ISRGVPLE--EIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ R + +I V+ +G + KFE L+ K + +++L
Sbjct: 515 VERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQKLYDDL 568
Score = 216 bits (545), Expect = 9e-55
Identities = 113/223 (50%), Positives = 146/223 (64%), Gaps = 3/223 (1%)
Query: 27 EVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEPVIGTGSSLSVELGPGLLTSIYD 86
E+VRVG LIGEIIRLEGD A IQVYEETAG+ +PV+ T LS ELGPG+L +I+D
Sbjct: 1 ELVRVGHDSLIGEIIRLEGDSATIQVYEETAGLTVNDPVLRTKKPLSCELGPGILGNIFD 60
Query: 87 GIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP-KVKVGDKVVGGDIIGEVPETSI 144
GIQRPL+ I K+ D +I RGV+ PAL +D+ W F P K+ VGD + GD+ V E ++
Sbjct: 61 GIQRPLKTIAIKSRDVYIPRGVSVPALDKDQLWEFQPNKLGVGDNITNGDLYATVFENTL 120
Query: 145 ITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEK 204
+ H I +PPG G+I IA G+Y++++ + +++ G KE M WPVR RP K
Sbjct: 121 MKHHIALPPGAMGKISYIAPAGQYSLQDTVLELEF-QGIKKEFTMLHTWPVRTPRPVASK 179
Query: 205 LPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
L + PL+TGQRV+D FP GGT AIPG FG GK V L
Sbjct: 180 LAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL 222
>gb|AAA61761.2| (U19745) V-ATPase A subunit [Drosophila melanogaster]
>gi|6003626|gb|AAF00515.1|AF185049_1 (AF185049) vacuolar
ATPase subunit A [Drosophila melanogaster]
>gi|7297994|gb|AAF53236.1| (AE003638) Vha68-1 gene
product [Drosophila melanogaster]
Length = 614
Score = 366 bits (930), Expect = e-100
Identities = 190/358 (53%), Positives = 256/358 (71%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 254 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTS 313
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+VA+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 314 NMPVAAREASIYTGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPA 373
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 374 YLGARLATFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 433
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ +++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 434 KKLAQRKHFPSINWLISYSKYMRALDEYYDKNY-PEFVPLRTKVKEILQEEEDLSEIVQL 492
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D CP K V M+R ++ FY+ A+
Sbjct: 493 VGKASLAETDKVTLEVAKLLKDDFLQQNSYSPYDRVCPFYKTVGMLRNIMAFYETARHAV 552
Query: 968 -SRGVPLEEIAKLPVREEIG-------RMKFEPDV----GKIKALIDKTNEQFEELFK 1013
S +I +RE +G MKF+ V KIKA D+ E ++ F+
Sbjct: 553 ESTAQSDNKITWNTIRESMGGIMYQLSSMKFKDPVKDGEQKIKADYDQLYEDLQQAFR 610
Score = 239 bits (604), Expect = 1e-61
Identities = 124/245 (50%), Positives = 161/245 (65%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GR+ V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 17 GRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDP 76
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL I T +I +GV AL R + W F P
Sbjct: 77 VLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMWEFNPL 136
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
V+VG + GGD+ G V E +++ +++V P +G + IA G Y +E+++ + + G
Sbjct: 137 NVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEF-DG 195
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
EI + M Q WPVR RP EKLP PL TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 255
Query: 243 DGDTL 247
L
Sbjct: 256 ISQAL 260
>sp|P49087|VATA_MAIZE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
>gi|1049253|gb|AAA80346.1| (U36436) vacuolar ATPase 69
kDa subunit [Zea mays]
Length = 561
Score = 366 bits (930), Expect = e-100
Identities = 188/354 (53%), Positives = 253/354 (71%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S+++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 197 TVISQALSKYSNSEAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 256
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 257 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 316
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LGS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 317 AYLAARLASFYERAGKVKCLGSPDRNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 376
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP++ +R KA E+LQ+E +L EIV+
Sbjct: 377 DKKLAQRKHFPSVNWLISYSKYSKALESFYEK-FDPDFIDIRTKAREVLQREDDLNEIVQ 435
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++F +A
Sbjct: 436 LVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQA 495
Query: 967 ISR--GVPLEEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ R G +I ++ +G + KFE +AL+ K + +++L
Sbjct: 496 VERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFKKLYDDL 549
Score = 192 bits (483), Expect = 2e-47
Identities = 99/203 (48%), Positives = 132/203 (64%), Gaps = 3/203 (1%)
Query: 47 KAVIQVYEETAGVRPGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIAR 105
+A IQVYEETAG+ +PV+ T LSVELGPG+L +I+DGIQRPL+ I K+GD +I R
Sbjct: 2 RATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPR 61
Query: 106 GVTAPALPRDKKWHFIP-KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAE 164
GV+ PAL +D W F P K+ VGD + GGD+ V E +++ H + +PPG G+I IA
Sbjct: 62 GVSVPALDKDVLWEFQPTKLGVGDVITGGDLYATVFENTLMQHHVALPPGSMGKISYIAP 121
Query: 165 EGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQ 224
G+Y +++ + +++ G K+ M Q WPVR RP KL + PL+TGQRV+D FP
Sbjct: 122 AGQYNLQDTVLELEF-QGIKKKFTMLQTWPVRSPRPVASKLAADTPLLTGQRVLDALFPS 180
Query: 225 AKGGTAAIPGPFGSGKCVDGDTL 247
GGT AIPG FG GK V L
Sbjct: 181 VLGGTCAIPGAFGCGKTVISQAL 203
>sp|Q38676|VAA1_ACEAT VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A ISOFORM 1 (V-ATPASE 69 KD
SUBUNIT) >gi|1303673|dbj|BAA09097.1| (D50528) adenosine
triphosphatase A subunit [Acetabularia acetabulum]
Length = 613
Score = 365 bits (927), Expect = 1e-99
Identities = 188/361 (52%), Positives = 257/361 (71%), Gaps = 18/361 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG---KPLMERTVLIANT 726
TV L+K+S++ ++Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 247 TVISQALSKYSNSDGIVYVGCGERGNEMAEVLMDFPQLTMTMPDGREESIMKRTTLVANT 306
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGIT++EYFRDMGY+ A+MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 307 SNMPVAAREASIYTGITLSEYFRDMGYNFAMMADSTSRWAEALREISGRLAEMPADSGYP 366
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYL ++LA FYER+GRV +GS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 367 AYLGARLASFYERSGRVACIGSPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGL 426
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y++A++ ++ K D ++ +R A E+LQKE EL EIV+
Sbjct: 427 DKKLAQRKHFPSVNWLISYSKYLNALEPFYEK-FDSDFVTLRQVAREVLQKEDELNEIVQ 485
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ IL AR L+EDYLQQ++F + D YCP K V MMR ++ F+ +A
Sbjct: 486 LVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQA 545
Query: 967 ISR----GVPLEEIAKLPVREEIGRM-------KFE---PDVGKIKALIDKTNEQFEELF 1012
I R V ++I ++ ++G + KFE G + A +++ NE+ +E F
Sbjct: 546 IERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVVTAHLNELNEELKEKF 605
Query: 1013 K 1013
+
Sbjct: 606 R 606
Score = 256 bits (647), Expect = 9e-67
Identities = 136/245 (55%), Positives = 169/245 (68%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+VVAD M G+ MYE+VRVG LIGEIIRLEGD A IQVYEET+G+ G+
Sbjct: 10 GSIKKVSGPVVVADNMGGSAMYELVRVGTGELIGEIIRLEGDTATIQVYEETSGLTVGDG 69
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V+ T LSV+LGPG+L +I+DGIQRPL+ I + +GD FI RGV P+L + K+W F P
Sbjct: 70 VLRTKQPLSVDLGPGILGNIFDGIQRPLKAIADVSGDVFIPRGVNVPSLDQTKQWEFRPS 129
Query: 124 V-KVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
KVGD+V GGDIIG VPE S++ HK+M+ P +G + IA G YTI E I +V+ G
Sbjct: 130 AFKVGDRVTGGDIIGIVPENSLLDHKVMLLPQAKGTVTYIAAPGNYTINEKIIEVEF-QG 188
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
E M Q WPVR RP EKL + PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 189 AKYEYSMKQSWPVRSPRPVVEKLLADTPLLTGQRVLDSLFPGVRGGTCAIPGAFGCGKTV 248
Query: 243 DGDTL 247
L
Sbjct: 249 ISQAL 253
>sp|P31405|VATA_GOSHI VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KDA SUBUNIT)
>gi|167313|gb|AAA33050.1| (L03186) vacuolar H+-ATPase
catalytic subunit [Gossypium hirsutum]
Length = 623
Score = 364 bits (924), Expect = 3e-99
Identities = 187/354 (52%), Positives = 253/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP++ ++R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSGALESFYEK-FDPDFISIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++F +A
Sbjct: 498 LVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQA 557
Query: 967 ISR--GVPLEEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ + G+ ++I ++ +G + KFE +AL+ K + E+L
Sbjct: 558 VEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDL 611
Score = 248 bits (626), Expect = 3e-64
Identities = 127/245 (51%), Positives = 166/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDALWDFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ GD + GGD+ V E S++ H + +PP G+I IA G+Y++++ + +++ G
Sbjct: 142 KIGEGDLLTGGDLYATVFENSLMQHHVALPPDAMGKITYIAPPGQYSLKDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKQFTMLQTWPVRTPRPVATKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>gb|AAC17840.1| (AF050673) vacuolar H+-ATPase catalytic subunit [Gossypium hirsutum]
Length = 623
Score = 364 bits (924), Expect = 3e-99
Identities = 187/354 (52%), Positives = 253/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K DP++ ++R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSGALESFYEK-FDPDFISIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++F +A
Sbjct: 498 LVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQA 557
Query: 967 ISR--GVPLEEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ + G+ ++I ++ +G + KFE +AL+ K + E+L
Sbjct: 558 VEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDL 611
Score = 248 bits (627), Expect = 2e-64
Identities = 127/245 (51%), Positives = 166/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ GD + GGD+ V E S++ H + +PP G+I IA G+Y++++ + +++ G
Sbjct: 142 KIGEGDLLTGGDLYATVFENSLMQHHVALPPDAMGKITYIAPPGQYSLKDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKQFTMLQTWPVRTPRPVATKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>sp|P13548|VATA_PHAAU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(VAA3-1) >gi|849136|gb|AAC49174.1| (U26709) vacuolar
H+-ATPase subunit A [Vigna radiata]
Length = 623
Score = 363 bits (923), Expect = 4e-99
Identities = 185/354 (52%), Positives = 251/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGIT+AEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYER G+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYERPGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ +++ DP++ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISRGVPL--EEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+ RG ++I ++ +G + KFE AL+ + + E+L
Sbjct: 558 VERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQKLHEDL 611
Score = 247 bits (625), Expect = 4e-64
Identities = 128/245 (52%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEETAG+ +P
Sbjct: 22 GYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ PAL +D W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ GD + GGD+ V E +++ H I +PP G+I IA G+Y+I + + +++ G
Sbjct: 142 KIGEGDLLTGGDLYATVFENTLMQHHIALPPDAMGKITYIAPPGQYSITDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VKKKFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>sp|P48602|VATA_DROME VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|641918|gb|AAA61760.1| (U19742)
vacuolar ATPase subunit A [Drosophila melanogaster]
Length = 614
Score = 363 bits (922), Expect = 5e-99
Identities = 188/358 (52%), Positives = 255/358 (70%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 254 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTS 313
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+VA+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 314 NMPVAAREASIYTGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPA 373
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 374 YLGARLATFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 433
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ +++ KN PE+ +R K E+LQ+E +L EIV++
Sbjct: 434 KKLAQRKHFPSINWLISYSKYMRALDEYYDKNY-PEFVPLRTKVKEILQEEEDLSEIVQL 492
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA++L++D+LQQ+++ D CP K V M+R ++ FY+ +
Sbjct: 493 VGKASLAETDKVTLEVAKLLKDDFLQQNSYSPYDRVCPFYKTVGMLRNIMAFYETARHCL 552
Query: 968 -SRGVPLEEIAKLPVREEIG-------RMKFEPDV----GKIKALIDKTNEQFEELFK 1013
S +I ++E +G MKF+ V KIKA D+ E ++ F+
Sbjct: 553 ESTAQSDNKITWNTIKESMGGIMYQLSSMKFKDPVKDGEQKIKADYDQLYEDLQQAFR 610
Score = 235 bits (592), Expect = 3e-60
Identities = 123/245 (50%), Positives = 160/245 (65%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GR+ V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+
Sbjct: 17 GRVYAVSGPVVSAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDR 76
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL I T +I +GV AL R + W F P
Sbjct: 77 VLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMWEFNPL 136
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
V+VG + GGD+ G V E +++ +++V P +G + IA G Y +E+++ + + G
Sbjct: 137 NVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEF-DG 195
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
EI + M Q WPVR RP EKLP PL TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 196 EITKHTMLQVWPVRHARPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV 255
Query: 243 DGDTL 247
L
Sbjct: 256 ISQAL 260
>sp|Q26975|VATA_TRYCO VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|480568|pir||S37049
H+-transporting ATPase (EC 3.6.1.35) chain A, vacuolar -
Trypanosoma congolense >gi|397636|emb|CAA81062.1|
(Z25814) vacuolar ATPase (catalytic (A) subunit)
[Trypanosoma congolense]
Length = 610
Score = 363 bits (921), Expect = 7e-99
Identities = 184/358 (51%), Positives = 258/358 (71%), Gaps = 12/358 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP--LMERTVLIANTS 727
TV L+K+S++ VIY+GCGERGNEM +VL +FP L G+ +M+RT L+ANTS
Sbjct: 252 TVISQALSKFSNSDAVIYVGCGERGNEMAEVLMDFPTLTTVIDGREESIMKRTCLVANTS 311
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEY+RDMG +A+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 312 NMPVAAREASIYTGITLAEYYRDMGKHIAMMADSTSRWAEALREISGRLAEMPADGGYPA 371
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL+++LA FYERAGRV +G R GSV+++GAVSPPGGDFS+PV TL +V+VFW L+
Sbjct: 372 YLSARLASFYERAGRVTCIGGPKREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLE 431
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y++A++ +++ +DP++ +R A E+LQ+E ELQEIV++
Sbjct: 432 KRLAQRKHFPSVNWLISYSKYLNALEPFFN-TLDPDYMRLRSVAAEILQREEELQEIVQL 490
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG D+L E ++ IL A+++RE++LQQ+AF D YCPP K M+R ++ FY+++ +
Sbjct: 491 VGKDSLSESDKIILETAKVIREEFLQQNAFTPYDKYCPPYKTCWMLRNIVAFYEESQRVV 550
Query: 968 SRGVPLEEIAKLPVREEI-------GRMKF-EPDVGKIKALIDKTNEQFEELFKKYGA 1017
+ +I +RE I MKF +P G+ +A ++ +Q EE+ + +
Sbjct: 551 AESAGELKITWNYIREMIPHIYTGLTEMKFRDPQEGE-EANVEFYRKQNEEIVSAFAS 607
Score = 245 bits (620), Expect = 1e-63
Identities = 125/245 (51%), Positives = 162/245 (66%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V+A+ M G+ MYE+V+VG L+GEIIRLEGD A IQVYEET G+ G+P
Sbjct: 15 GAVKAVSGPVVIAENMGGSAMYELVQVGSFRLVGEIIRLEGDTATIQVYEETGGLTVGDP 74
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVI-REKTGDFIARGVTAPALPRDKKWHFIPK 123
V TG LS+ELGPG+++ I+DGIQRPL+ I R FI RGV +L K+W F P
Sbjct: 75 VYCTGKPLSLELGPGIMSEIFDGIQRPLDTIYRMVENVFIPRGVQVKSLNDQKQWDFKPC 134
Query: 124 VKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
+KVGD V GGDIIG V E S++ H IM+PP + G + I G YT+++ I +++ +G
Sbjct: 135 LKVGDLVSGGDIIGSVVENSLMYNHSIMIPPNVRGRVTSIVPSGNYTLQDDIIELEY-NG 193
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
+K LK+ RWPVR RP K PL+TGQRV+D FP +GGT AIPG FG GK V
Sbjct: 194 TVKSLKLMHRWPVRTPRPVASKESGNHPLLTGQRVLDALFPSVQGGTCAIPGAFGCGKTV 253
Query: 243 DGDTL 247
L
Sbjct: 254 ISQAL 258
>pir||T27035 hypothetical protein Y49A3A.2 - Caenorhabditis elegans
>gi|4008438|emb|CAA22076.1| (AL033512) predicted using
Genefinder~contains similarity to Pfam domain: PF00006
(ATP synthase alpha/beta family), Score=739.2,
E-value=5.6e-219, N=1; PF00306 (ATP synthase ab C
terminal), Score=205.7, E-value=2.3e-58, N=1~cDNA EST
yk4d5.3 comes from >
Length = 606
Score = 361 bits (916), Expect = 3e-98
Identities = 183/351 (52%), Positives = 252/351 (71%), Gaps = 11/351 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ +IY+GCGERGNEM++VL +FP+L G +M+RT L+ANTS
Sbjct: 246 TVISQSLSKYSNSDAIIYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMKRTALVANTS 305
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEYFRDMG +VA+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 306 NMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPA 365
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YLA++LA FYERAGRV LGS R GSV+++GAVSPPGGDF++PV TL +V+VFW LD
Sbjct: 366 YLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLD 425
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+++++ KN PE+ ++R K E+LQ+E +L EIV++
Sbjct: 426 KKLAQRKHFPSINWLISYSEYMRALEEFYEKNY-PEFVSLRTKCKEILQEEEDLSEIVQL 484
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + + D +CP K V M++ ++ FYD A+
Sbjct: 485 VGKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGFYDLARHAV 544
Query: 968 SRGVPLE-EIAKLPVREEIG-------RMKFEPDVGKIKALIDKTNEQFEE 1010
+ +I +++ +G MKF+ V +A I K E E
Sbjct: 545 EATAQSDNKITWNVIKDSMGDLIYQLSAMKFKDPVADGEAKIRKDYEDLAE 595
Score = 239 bits (603), Expect = 1e-61
Identities = 125/246 (50%), Positives = 166/246 (66%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 8 GFVYGVSGPVVTAEKMAGSAMYELVRVGHQELVGEIIRLEGDYATIQVYEETSGVTIGDP 67
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFI-- 121
V+ TG LSVELGPG++ SI+DGIQRPL+ I + T +I +GV+ AL R+ +W F+
Sbjct: 68 VLRTGKPLSVELGPGIMGSIFDGIQRPLKDIADITQSIYIPKGVSTNALSREARWDFVVS 127
Query: 122 PKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG V GGDIIG V E +I HKI++PP G I +A G+YT+E+ + +++ +
Sbjct: 128 KDLRVGGHVTGGDIIGTVDENLLIKHKILLPPSACGTITFVAPSGQYTVEDTLLELEF-A 186
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKL PL+ GQRV+D FP +GGT AIPG FG GK
Sbjct: 187 GRKQKFSMLQIWPVRSPRPVTEKLAANNPLLCGQRVLDALFPCVQGGTTAIPGAFGCGKT 246
Query: 242 VDGDTL 247
V +L
Sbjct: 247 VISQSL 252
>gb|AAF53234.1| (AE003638) CG5075 gene product [Drosophila melanogaster]
Length = 743
Score = 360 bits (913), Expect = 6e-98
Identities = 181/358 (50%), Positives = 256/358 (70%), Gaps = 14/358 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L+ G + +M+RT L+ANTS
Sbjct: 379 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPQLEVEVNGTMESIMKRTALVANTS 438
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 439 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADAGYPA 498
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAG V LGS R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 499 YLGARLASFYERAGLVKCLGSPDREGSVSIVGAVSPPGGDFSDPVTSATLSIVQVFWGLD 558
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ + D +++ +PE+ +R KA ++LQ+E +L EIV++
Sbjct: 559 KKLAQRKHFPSVNWLQSYSKYMRTL-DTYYEESNPEFTHLRAKAKKVLQEEDDLAEIVQL 617
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+ML++D+LQQ+++ + D YCP K + M++ ++ FYD + ++
Sbjct: 618 VGKSSLNEEDKITLEVAKMLKDDFLQQNSYSQYDAYCPFFKTIGMLKNMMTFYDAAILSV 677
Query: 968 SRGVPLE--------EIAKLPVREEIGRMKF-EPDVGKIKAL--IDKTNEQFEELFKK 1014
E I + E+ MKF +P +G+ L ++K ++ F++
Sbjct: 678 QNTADNEARVTWGLIRIKAANILYELSTMKFIDPKLGEATVLESMNKLHDNILSTFRE 735
Score = 239 bits (603), Expect = 1e-61
Identities = 127/246 (51%), Positives = 167/246 (67%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
GRI V+GP+V A+ M GA MYE+VRVG L+GEIIRLEGD A IQVYE+T+GV G+P
Sbjct: 141 GRIFGVSGPVVNAEEMAGAAMYELVRVGHSQLVGEIIRLEGDMATIQVYEDTSGVSVGDP 200
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V TG LSVELGPG++ SI+DGIQRPL I E T ++ +G+ P+LPR+ + F P
Sbjct: 201 VYQTGKPLSVELGPGIMGSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPG 260
Query: 123 KVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
K+K+ + GGDI G V E S++ H++++PP +G I +A G Y ++EVI + + +
Sbjct: 261 KLKIDALITGGDIYGSVFENSMMHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVETEF-N 319
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
EI + M Q WPVR RP ++KLP PL+TGQRV+D FFP +GGT AIPG FG GK
Sbjct: 320 DEITKHTMLQVWPVRRCRPVEDKLPSNSPLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKT 379
Query: 242 VDGDTL 247
V L
Sbjct: 380 VISQAL 385
>gi|6680752 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha 70
kDa, isoform 2; 70-kDa subunit [Mus musculus]
>gi|1718086|sp|P50516|VATA_MOUSE VACUOLAR ATP SYNTHASE
CATALYTIC SUBUNIT A, UBIQUITOUS ISOFORM (V-ATPASE 69 KDA
SUBUNIT) >gi|1184659|gb|AAC52410.1| (U13837) vacuolar
adenosine triphosphatase subunit A [Mus musculus]
Length = 617
Score = 359 bits (912), Expect = 8e-98
Identities = 185/358 (51%), Positives = 253/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP--LMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKAESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEGDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ +++FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMISFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE +G MKF+ V KIKA + E + F+
Sbjct: 556 ETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFR 613
Score = 242 bits (612), Expect = 1e-62
Identities = 130/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG SVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW FIP
Sbjct: 79 VLRTGKPRSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWEFIPS 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGSVTYIAPPGNYDASNVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>sp|Q39442|VATA_BETVU VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
>gi|1418409|emb|CAA67305.1| (X98767) V-type ATPase [Beta
vulgaris]
Length = 623
Score = 359 bits (912), Expect = 8e-98
Identities = 188/354 (53%), Positives = 249/354 (70%), Gaps = 13/354 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADS SRWAEALREISGRL EMP + GYP
Sbjct: 319 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSGSRWAEALREISGRLAEMPADSGYP 378
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYE AG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 379 AYLAARLASFYEAAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 438
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y A++ ++ K D E+ +R KA E+LQ+E +L EIV+
Sbjct: 439 DKKLAQRKHFPSVNWLISYSKYSGALESFYEK-FDSEFIDIRTKAREVLQREDDLNEIVQ 497
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++FY+ +A
Sbjct: 498 LVGKDALAETDKITLDTAKLLREDYLAQNAFTAYDKFCPFYKSVWMMRNIIHFYNLANQA 557
Query: 967 ISRGVPLE------EIAKLPVREEIGRM---KFEPDVGKIKALIDKTNEQFEEL 1011
+ RG + + KL + + R+ KFE AL+ K + E+L
Sbjct: 558 VERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFKKLNEDL 611
Score = 249 bits (630), Expect = 9e-65
Identities = 128/245 (52%), Positives = 166/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEET G+ +P
Sbjct: 22 GYIRKVSGPVVVADGMNGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETGGLTVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ P L +D +W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPPLDKDTQWDFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ VGD + GGD+ V E S++ H +++PP G+I IA G YTI++ + +++ G
Sbjct: 142 KLGVGDLLTGGDLYAIVDENSLMQHHVVLPPDAMGKITYIAPAGNYTIQDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
+K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AI G FG GK V
Sbjct: 201 VVKKFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAILGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
>sp|O16109|VATA_AEDAE VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|2454488|gb|AAB71659.1|
(AF008922) V-ATPase A-subunit [Aedes aegypti]
Length = 615
Score = 359 bits (911), Expect = 1e-97
Identities = 189/359 (52%), Positives = 255/359 (70%), Gaps = 17/359 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L G + +M+RT L+ANTS
Sbjct: 255 TVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTS 314
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 315 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 374
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 375 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 434
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL SYS Y+ A+ D++ KN E+ K E+LQ+E +L EIV++
Sbjct: 435 KKLAQRKHFPSINWLISYSKYMRALDDFYDKNFQ-EFVPTAYKVKEILQEEEDLSEIVQL 493
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQV-TMMRVLLNFYDKTMEA 966
VG +L E ++ L VA++L++D+LQQ+++ D +CP K V M+R ++ FYD A
Sbjct: 494 VGKASLAETDKITLEVAKLLKDDFLQQNSYSAYDRFCPFYKTVGRMLRNMIGFYDMARHA 553
Query: 967 ISRGVPLE-EIAKLPVREEIGR-------MKFEPDVG----KIKALIDKTNEQFEELFK 1013
+ E +I +R+ +G MKF+ D G KIKA D+ E ++ F+
Sbjct: 554 VETTAQSENKITWNVIRDSMGNILYQLSSMKFK-DPGRMAKKIKADFDQLYEDLQQAFR 611
Score = 226 bits (571), Expect = 8e-58
Identities = 120/246 (48%), Positives = 159/246 (63%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A+ M G+ MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 17 GYVFAVSGPVVTAERMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDP 76
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ SI+DGIQRPL+ I E T +I G L ++ P
Sbjct: 77 VLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTSSIYIPEGCEHSLLVPYRRLGIQPL 136
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
+ +G + G D+ G V E +++ HK++VPP +G + IA G YT++++I + +
Sbjct: 137 ERKGLGSHITGRDLYGLVHENTLVKHKLLVPPRAKGTVRYIAPPGNYTVDDIILETEF-D 195
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
GEI + M Q WPVR RP EKLP PL+TGQRV+D+ FP +GGT AIPG FG GK
Sbjct: 196 GEINKWSMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKT 255
Query: 242 VDGDTL 247
V L
Sbjct: 256 VISQAL 261
>dbj|BAA36691.1| (AB016483) vacuolar-type H+-ATPase subunit A [Ascidia sydneiensis
samea]
Length = 619
Score = 359 bits (911), Expect = 1e-97
Identities = 182/348 (52%), Positives = 249/348 (71%), Gaps = 11/348 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP--LMERTVLIANTS 727
TV L+K+S++ +++Y+GCGERGNEM++VL +FP+L G+ +M+RT L+ANTS
Sbjct: 259 TVISQSLSKFSNSDIIVYVGCGERGNEMSEVLRDFPELTVYMYGREESIMKRTTLVANTS 318
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 319 NMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 378
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV GS R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 379 YLGARLASFYERAGRVTCQGSPSREGSVSLVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 438
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ ++ D++ KN P++ +R K E+LQ+E EL EIV++
Sbjct: 439 KKLAQRKHFPSVNWLISYSNYMRSLDDFYDKNY-PDFVPLRVKVKEILQEEEELSEIVQL 497
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ F D YCP K V M+R ++ FYD ++
Sbjct: 498 VGKSSLAETDKITLEVAKIIKDDFLQQNGFSAYDRYCPFYKTVGMIRNMIAFYDMARASV 557
Query: 968 -SRGVPLEEIAKLPVRE-------EIGRMKFEPDVGKIKALIDKTNEQ 1007
S +I +RE + MKF+ + +A I + EQ
Sbjct: 558 ESTAQSDNKITWAIIRENLSDILYRLSSMKFKDPIKDGEAKIKREIEQ 605
Score = 256 bits (647), Expect = 9e-67
Identities = 127/246 (51%), Positives = 167/246 (67%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A+ M G+ MYE+VRVG L+GEIIRL+GD+A IQVYEET+GV G+P
Sbjct: 21 GTVFGVSGPVVTAEHMSGSSMYELVRVGHSELVGEIIRLDGDRATIQVYEETSGVTVGDP 80
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG+L +IYDGIQRPLEVI+++T +I RGV AL R +W F P
Sbjct: 81 VLRTGKPLSVELGPGILNNIYDGIQRPLEVIQQQTKSIYIPRGVNTLALNRSAQWDFAPT 140
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
+VG + GGDI G + E S+I H++M+PP G + +AE G Y +++ + +V+
Sbjct: 141 KAFQVGSHITGGDIYGLIQENSLIQHRVMLPPKARGRVTYVAEAGHYNVDDTLLEVEF-D 199
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G +K+ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT IPG FG GK
Sbjct: 200 GVVKKYSMLQVWPVRQPRPCVEKLPANYPLLTGQRVLDALFPSVQGGTTGIPGAFGCGKT 259
Query: 242 VDGDTL 247
V +L
Sbjct: 260 VISQSL 265
>gb|AAB50981.1| (U49169) vacuolar H+-ATPase A subunit [Dictyostelium discoideum]
Length = 618
Score = 358 bits (910), Expect = 1e-97
Identities = 183/358 (51%), Positives = 249/358 (69%), Gaps = 13/358 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ ++Y+GCGERGNEM +VL EFP+L K P+M+RT L+ANTS
Sbjct: 258 TVISQSLSKFSNSDAIVYVGCGERGNEMAEVLMEFPELHTKVGDKEEPIMQRTCLVANTS 317
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEYFRDMG +VA+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 318 NMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLAEMPADSGYPA 377
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV +G R+GSV+++GAVSPPGGDF++PV TL +V+VFW LD
Sbjct: 378 YLGARLASFYERAGRVSCIGHPTRIGSVTIVGAVSPPGGDFADPVTAATLGIVQVFWGLD 437
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+INWL S+S Y+ A+ D + +DPE+ +R +A E+LQ E +L EIV++
Sbjct: 438 KKLAQRKHFPSINWLISFSKYMQAL-DTHYDQMDPEFVPLRTRAKEILQMEEDLSEIVQL 496
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG D+L E E+ + VAR++R+D+LQQ+ F D CP K V M++ ++ FY+ +A+
Sbjct: 497 VGQDSLGESEKITIEVARIIRDDFLQQNGFSPYDKCCPFFKTVWMLKNMMTFYNLAQKAV 556
Query: 968 SRGVPLEEIAKLPVREE-------IGRMKF-EPDVGK--IKALIDKTNEQFEELFKKY 1015
++ ++ E I MKF +P G+ + A NE F+ +
Sbjct: 557 ESSTADNKVTWNQIKNELKEIIHRITSMKFQDPTDGEQTLTAHFSTLNEDIITAFRNF 614
Score = 257 bits (649), Expect = 5e-67
Identities = 133/248 (53%), Positives = 173/248 (69%), Gaps = 4/248 (1%)
Query: 3 AKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPG 62
++G ++ V+GP+V+A+ + GA MYE+VRVG L+GEIIRLE D A IQVYEET+G+ G
Sbjct: 18 SQGFVLSVSGPVVIANQLAGAAMYELVRVGHNQLVGEIIRLEEDTATIQVYEETSGLTVG 77
Query: 63 EPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFI 121
+PV+ T L+VELGPG++ +I+DGIQRPL I E T G +I RG+ P+L R KW +
Sbjct: 78 DPVLRTHKPLTVELGPGIMNNIFDGIQRPLNAIAEITKGIYIPRGINTPSLNRTIKWPYQ 137
Query: 122 P--KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKT 179
P K+KVGD V GGDI G+V E ++I HKIMVPP G IVEIA GEYT++ + ++
Sbjct: 138 PDTKLKVGDNVSGGDIFGQVVENNLIIHKIMVPPKEMGTIVEIAPAGEYTLDHALLTIEF 197
Query: 180 PSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSG 239
G+ K+L M WPVR RP EKLP PL+TGQRV+D+ FP +GGT AIPG FG G
Sbjct: 198 -DGKRKQLTMVHNWPVRSARPVIEKLPCNYPLLTGQRVLDSLFPCVQGGTCAIPGAFGCG 256
Query: 240 KCVDGDTL 247
K V +L
Sbjct: 257 KTVISQSL 264
>pir||S19659 H+-transporting ATPase (EC 3.6.1.35) chain A, vacuolar - bovine
>gi|163|emb|CAA41276.1| (X58386) H(+)-ATPase subunit A
[Bos taurus] >gi|228275|prf||1802274A vacuolar H
ATPase:SUBUNIT=A [Bos taurus]
Length = 618
Score = 358 bits (909), Expect = 2e-97
Identities = 185/358 (51%), Positives = 252/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 258 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 317
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 318 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 377
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 378 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 437
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 438 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 496
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 497 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 556
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE +G MKF+ V KIKA + E + F+
Sbjct: 557 ETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFR 614
Score = 243 bits (613), Expect = 9e-63
Identities = 130/246 (52%), Positives = 161/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 20 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 79
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 80 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDVKWDFTPC 139
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 140 KNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 198
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 199 GIKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 258
Query: 242 VDGDTL 247
V +L
Sbjct: 259 VISQSL 264
>sp|Q03498|VATA_PLAFA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|477307|pir||A48582 vacuolar
ATPase A subunit homolog - malaria parasite (Plasmodium
falciparum) >gi|160736|gb|AAA29782.1| (L08200) vacuolar
ATPase [Plasmodium falciparum]
Length = 611
Score = 358 bits (909), Expect = 2e-97
Identities = 174/350 (49%), Positives = 250/350 (70%), Gaps = 11/350 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKL--KDPKTGKPLMERTVLIANTS 727
T L+K+S+++V+IY+GCGERGNEM ++L +FP+L K +M+RT L+ANTS
Sbjct: 251 TCVSQALSKYSNSEVIIYVGCGERGNEMAEILSDFPELTTKVDNEDVGIMQRTCLVANTS 310
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+ EYFRDMGY+ +MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 311 NMPVAAREASIYTGITLCEYFRDMGYNATMMADSTSRWAEALREISGRLAEMPADSGYPA 370
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAG+V +GS R+GS++++GAVSPPGGDFS+PV T+ +V+ FW LD
Sbjct: 371 YLGARLASFYERAGKVKCIGSPSRIGSITIVGAVSPPGGDFSDPVTTATMSIVQAFWGLD 430
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NW TS+S YV ++ ++ N D ++ ++R K ++LQ+ES+L +IV++
Sbjct: 431 KKLAQRKHFPSVNWSTSFSKYVRQLEQYF-DNFDQDFLSLRQKISDILQQESDLNDIVQL 489
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG D+L E ++ ++ VA+++RED+LQQ+AF + D CP +K V MMR++ +FY + +
Sbjct: 490 VGKDSLSEDQKVVMEVAKIIREDFLQQNAFSDYDYMCPLQKTVGMMRIICHFYAQCLRT- 548
Query: 968 SRGVPLEEIAKLPVREEIGRM--KFEPDVGKIKALIDKTNEQFEELFKKY 1015
L+E + G + P + KI + + + +E FKKY
Sbjct: 549 -----LQEYDSRERKIGWGSIYNTLRPTINKITHMKFENPKNSDEYFKKY 593
Score = 224 bits (566), Expect = 3e-57
Identities = 120/243 (49%), Positives = 162/243 (66%), Gaps = 6/243 (2%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + +V G LV+A+ M G +MYE+ +VG L+GEIIRLEG+ A IQVYE+T+G+ G+P
Sbjct: 12 GVVYKVAGSLVIAENMSGTRMYELAKVGWNKLVGEIIRLEGNYAYIQVYEDTSGLSVGDP 71
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFI-- 121
VI TG++LSVELGPG+L +IYDGIQRPLE I GD +I +G+ +L DK+W F
Sbjct: 72 VIKTGNALSVELGPGILDNIYDGIQRPLERIANVCGDVYIYKGIDMTSLDHDKQWQFYAD 131
Query: 122 PKVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
K+K+ D V GGDI G V E + HKIM PP +G + IA +G YT+++ I +++
Sbjct: 132 KKLKLNDIVTGGDIFGFVDENKLFKEHKIMAPPNAKGRLTYIAPDGSYTLKDKIFELEY- 190
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
G+ + WPVR RP EK+ + L+TGQRV+D+ FP +GGT AIPG FG GK
Sbjct: 191 QGKKYTYGLSHLWPVRDPRPVLEKVTGDTLLLTGQRVLDSLFPTVQGGTCAIPGAFGCGK 250
Query: 241 -CV 242
CV
Sbjct: 251 TCV 253
>sp|P31404|VATA_BOVIN VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A, UBIQUITOUS ISOFORM
(V-ATPASE 69 KD SUBUNIT) >gi|162705|gb|AAA30392.1|
(M80430) vacuolar H+-ATPase A subunit [Bos taurus]
Length = 617
Score = 358 bits (909), Expect = 2e-97
Identities = 185/358 (51%), Positives = 252/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE +G MKF+ V KIKA + E + F+
Sbjct: 556 ETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFR 613
Score = 239 bits (604), Expect = 1e-61
Identities = 129/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVEL PG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVELCPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDVKWDFTPC 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GIKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>prf||1902186A vacuolar H ATPase:SUBUNIT=70kD [Bos taurus]
Length = 618
Score = 358 bits (909), Expect = 2e-97
Identities = 185/358 (51%), Positives = 252/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 258 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 317
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 318 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 377
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 378 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 437
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 438 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 496
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 497 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 556
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE +G MKF+ V KIKA + E + F+
Sbjct: 557 ETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFR 614
Score = 240 bits (605), Expect = 8e-62
Identities = 129/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 20 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 79
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 80 VLRTHKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDVKWDFTPC 139
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 140 KNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 198
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 199 GIKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 258
Query: 242 VDGDTL 247
V +L
Sbjct: 259 VISQSL 264
>sp|Q38677|VAA2_ACEAT VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A ISOFORM 2 (V-ATPASE 69 KD
SUBUNIT) >gi|1303679|dbj|BAA09098.1| (D50529) adenosine
triphosphatase A subunit [Acetabularia acetabulum]
Length = 613
Score = 358 bits (909), Expect = 2e-97
Identities = 187/367 (50%), Positives = 251/367 (67%), Gaps = 22/367 (5%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG---KPLMERTVLIANT 726
TV L+K+S++ ++Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 247 TVISQALSKYSNSDGIVYVGCGERGNEMAEVLMDFPQLTMTMPDGREESIMKRTTLVANT 306
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGIT++EYFRDMGY+ A+MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 307 SNMPVAAREASIYTGITLSEYFRDMGYNFAMMADSTSRWAEALREISGRLAEMPADSGYP 366
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYL ++LA FYER+GRV +GS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 367 AYLGARLASFYERSGRVACIGSPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGL 426
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+HFP++NWL SYS Y++A++ ++ K D ++ +R A E+LQKE EL EIV+
Sbjct: 427 DKKLAQRKHFPSVNWLISYSKYLNALEPFYEK-FDNDFVDIRQVAREVLQKEDELNEIVQ 485
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E ++ IL A L+EDYL Q++F + D YCP K V MMR ++ F+ +A
Sbjct: 486 LVGKDALAESDKIILETADFLKEDYLAQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQA 545
Query: 967 ISRGVP--------LEEIAKLPVRE---EIGRMKFEPD-------VGKIKALIDKTNEQF 1008
I R L I K + + ++ KFE G++ L D+ E+F
Sbjct: 546 IERTATGNSDGQKLLSNIIKAKLGDLLYKVSSQKFEDPSDGESVVTGRLNELNDELKEKF 605
Query: 1009 EELFKKY 1015
L +Y
Sbjct: 606 RALEDEY 612
Score = 251 bits (634), Expect = 3e-65
Identities = 134/245 (54%), Positives = 168/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+VVAD M G+ MYE+VRVG LIGEIIRLEGD A IQVYEET+G+ G+
Sbjct: 10 GSIKKVSGPVVVADNMGGSAMYELVRVGTGELIGEIIRLEGDTATIQVYEETSGLTVGDG 69
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSV+LGPG+L +I+DGIQRPL+ I + +GD FI RGV P+L + K+W F P
Sbjct: 70 VLRTKQPLSVDLGPGILGNIFDGIQRPLKAIADVSGDVFIPRGVNVPSLDQTKQWEFHPS 129
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
+VGD+V GGDIIG VPE +++ HK+M+ P +G I IA G Y I E I +V+ G
Sbjct: 130 SYRVGDRVTGGDIIGTVPENTLLDHKVMLIPQAKGTITYIAPAGNYNINERIIEVEF-QG 188
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
E M Q WPVR RP EKL + PL+TGQRV+D+ FP +GGT AIPG FG GK V
Sbjct: 189 TKYEYCMKQSWPVRSPRPVVEKLLADTPLLTGQRVLDSLFPGVRGGTCAIPGAFGCGKTV 248
Query: 243 DGDTL 247
L
Sbjct: 249 ISQAL 253
>gb|AAA21531.1| (U04849) putative vacuolar proton-transporting ATPase catalytic
subunit [Entamoeba histolytica]
Length = 607
Score = 356 bits (905), Expect = 5e-97
Identities = 181/354 (51%), Positives = 253/354 (71%), Gaps = 16/354 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKL--KDPKTGKPLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM +VL +FP L K + +M RT L+ANTS
Sbjct: 249 TVISQALSKYSNSDVIIYVGCGERGNEMAEVLRDFPALSIKVGDKEESIMTRTALVANTS 308
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EY+RDMGY+VA+MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 309 NMPVAAREASIYTGITLSEYYRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPA 368
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YLA++LA FYERAG V LGS R+GSVS++GAVSPPGGDFS+PV +TL +V+VFW LD
Sbjct: 369 YLAARLASFYERAGMVECLGSPKRIGSVSIVGAVSPPGGDFSDPVTTSTLNIVQVFWGLD 428
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFPA+NW S+S Y+ ++ D ++ + D E+ +RDK E+LQ E L +IV++
Sbjct: 429 KKLAQRKHFPAVNWNISFSKYIKSL-DSYYNSKDEEFVPLRDKIKEILQMEEGLLQIVQL 487
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG D+L E ++ L +AR++++D+LQQ+++ D CP K ++R +++FY++ +A+
Sbjct: 488 VGQDSLAETDKLTLEIARVIKDDFLQQNSYTPYDFSCPFYKTCGIIRNIIHFYNEAFQAL 547
Query: 968 SRGVPLEEIAKLPVRE-------EIGRMKF-EPDVGKIKALIDKTNEQFEELFK 1013
S +I ++ I RMK+ EP G+ NE++ EL++
Sbjct: 548 SVDYEDHKITWATIKSAMSDLLVRISRMKYEEPSQGE-----QVINEKYGELYR 596
Score = 258 bits (653), Expect = 2e-67
Identities = 128/244 (52%), Positives = 171/244 (69%), Gaps = 2/244 (0%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G++ V+GP+V+A+ M GA M E+VRVG GL+GEIIRLEG A IQVYEETAG++ G+
Sbjct: 13 GKVYSVSGPVVIAENMLGAAMNELVRVGSRGLMGEIIRLEGTTATIQVYEETAGLQLGDM 72
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V T LSVELGPG++TSI+DGIQRPL I EK+G FI RG++ +L ++W F P
Sbjct: 73 VERTMKPLSVELGPGIMTSIFDGIQRPLVSIAEKSGSIFIPRGISVASLDHQREWEFTPL 132
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
VK GD V GGDIIG VPE++++ HKI+VPP + G + +AE G YT+++ + ++ +G+
Sbjct: 133 VKKGDHVSGGDIIGTVPESALVVHKILVPPTVMGTVTWVAEAGNYTLDDKVIGIEF-NGK 191
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+EL M WPVR RP EK+ PL+TGQR++D+ FP +GGT AIPG FG GK V
Sbjct: 192 TEELSMAHHWPVRKPRPTAEKITSTTPLVTGQRILDSLFPCIQGGTCAIPGAFGCGKTVI 251
Query: 244 GDTL 247
L
Sbjct: 252 SQAL 255
>gi|4502305 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha
polypeptide, 70kD, isoform 1 [Homo sapiens]
>gi|586210|sp|P38606|VATA_HUMAN VACUOLAR ATP SYNTHASE
CATALYTIC SUBUNIT A, UBIQUITOUS ISOFORM (V-ATPASE 69 KD
SUBUNIT) (ISOFORM VA68) >gi|291868|gb|AAA83249.1|
(L09235) ATPase [Homo sapiens]
Length = 617
Score = 356 bits (904), Expect = 7e-97
Identities = 177/332 (53%), Positives = 243/332 (72%), Gaps = 4/332 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGRMKFEPDVGKIK 998
+ +I +RE +G + ++ K K
Sbjct: 556 ETTAQSDNKITWSIIREHMGDILYKLSSMKFK 587
Score = 238 bits (602), Expect = 2e-61
Identities = 127/246 (51%), Positives = 159/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETCGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSV++GPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVDVGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWDFTPC 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WP R RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFTMVQVWPARQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>pir||B46091 H+-transporting ATPase (EC 3.6.1.35) chain A, vacuolar (VA68 type)
- human
Length = 617
Score = 356 bits (904), Expect = 7e-97
Identities = 177/332 (53%), Positives = 243/332 (72%), Gaps = 4/332 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGRMKFEPDVGKIK 998
+ +I +RE +G + ++ K K
Sbjct: 556 ETTAQSDNKITWSIIREHMGDILYKLSSMKFK 587
Score = 239 bits (603), Expect = 1e-61
Identities = 127/246 (51%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSV++GPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVDVGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWDFTPC 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WP R RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFTMVQVWPARQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>gb|AAF14870.1|AF113129_1 (AF113129) vacuolar ATPase isoform VA68 [Homo sapiens]
Length = 617
Score = 356 bits (904), Expect = 7e-97
Identities = 177/332 (53%), Positives = 243/332 (72%), Gaps = 4/332 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGRMKFEPDVGKIK 998
+ +I +RE +G + ++ K K
Sbjct: 556 ETTAQSDNKITWSIIREHMGDILYKLSSMKFK 587
Score = 241 bits (609), Expect = 3e-62
Identities = 129/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWDFTPC 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WP R RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFTMVQVWPARQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>gi|11434143 ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha
polypeptide, 70kD, isoform 1 [Homo sapiens]
Length = 617
Score = 356 bits (904), Expect = 7e-97
Identities = 177/332 (53%), Positives = 243/332 (72%), Gaps = 4/332 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGRMKFEPDVGKIK 998
+ +I +RE +G + ++ K K
Sbjct: 556 ETTAQSDNKITWSIIREHMGDILYKLSSMKFK 587
Score = 242 bits (612), Expect = 1e-62
Identities = 130/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET GV G+P
Sbjct: 19 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETCGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWDFTPC 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>sp|P48414|VATA_CYACA VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE A SUBUNIT)
>gi|7436322|pir||T14360 H+-transporting ATPase (EC
3.6.1.35) chain A - red alga (Cyanidium caldarium)
>gi|576659|gb|AAA85820.1| (U17100) V-ATPase A subunit
[Cyanidium caldarium]
Length = 587
Score = 355 bits (901), Expect = 2e-96
Identities = 170/319 (53%), Positives = 242/319 (75%), Gaps = 4/319 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP--LMERTVLIANTS 727
TV L+K+S++ ++Y+GCGERGNEM +VL++FP+L + +M+RT+L+ANTS
Sbjct: 250 TVISQALSKFSNSDGIVYVGCGERGNEMAEVLKDFPELTMTVGDREESIMKRTLLVANTS 309
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EY+RDMG ++++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 310 NMPVAAREASIYTGITVSEYYRDMGLNISMMADSTSRWAEALREISGRLAEMPADSGYPA 369
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YLA++LA FYERAG+V LGS R GS++++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 370 YLAARLASFYERAGKVSCLGSPNRQGSITIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 429
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A++ ++ + PE+ + KA E+LQ E +L EIV++
Sbjct: 430 KKLAQRKHFPSVNWLISYSKYMKALEPYYEERF-PEFLNYQQKAREILQTEDDLMEIVQL 488
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG D+L E ++ L VA+M+RED+L Q++F E D +CP K V M+R +++FY+ +A+
Sbjct: 489 VGKDSLAENDKITLEVAKMIREDFLAQNSFTEYDRFCPFYKSVLMLRNMIHFYELANKAV 548
Query: 968 SRGVPLEEIAKLPVREEIG 986
G + + ++E++G
Sbjct: 549 -EGSGEQHLTLAQIKEQMG 566
Score = 263 bits (664), Expect = 1e-68
Identities = 136/246 (55%), Positives = 172/246 (69%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+V A+ M GA MYE+VRVG L+GEIIRLEG A IQVYEET+G+ G+P
Sbjct: 12 GIIKKVSGPVVSAENMDGAAMYELVRVGNEQLVGEIIRLEGSVATIQVYEETSGLTIGDP 71
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TGS LSVELGPGL+ +I+DGIQRPLE I E++ FI RGV PAL R K W F P
Sbjct: 72 VLCTGSPLSVELGPGLMGNIFDGIQRPLEKIAERSNSVFIPRGVNVPALDRKKVWEFRPA 131
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
+KVGD + GDI G VPET +I HKIM+PP G+IV +A G+YT+E+ + ++ +
Sbjct: 132 DNLKVGDPITAGDIYGIVPETPLIDHKIMLPPNQMGKIVFLAPPGDYTLEDTVLEIDF-N 190
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G+ K+ M +WPVR+ RP EKL + PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 191 GQKKKFSMVHQWPVRLPRPVTEKLRADKPLLTGQRVLDALFPSVQGGTCAIPGAFGCGKT 250
Query: 242 VDGDTL 247
V L
Sbjct: 251 VISQAL 256
>emb|CAB55557.1| (AJ131823) H(+)-transporting ATP synthase [Scherffelia dubia]
Length = 615
Score = 354 bits (898), Expect = 3e-96
Identities = 183/366 (50%), Positives = 253/366 (69%), Gaps = 21/366 (5%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG---KPLMERTVLIANT 726
TV L+K+S++ +IY+GCGERGNEM +VL EFP L + +M+RT L+ANT
Sbjct: 250 TVISQALSKFSNSDGIIYVGCGERGNEMAEVLYEFPALTMTMPDGREESIMKRTTLVANT 309
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGIT+AEYFRDMGY+ ++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 310 SNMPVAAREASIYTGITLAEYFRDMGYNFSMMADSTSRWAEALREISGRLAEMPADSGYP 369
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYL ++LA FYER+GRV LGS R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 370 AYLGARLASFYERSGRVKCLGSPGREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGL 429
Query: 847 DADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
D LA+R+H P++NWL SYS Y +++ +++ D E+ ++R KA ++L KE L EIV+
Sbjct: 430 DKKLAQRKHLPSVNWLISYSKYEKSLEP-FYEGFDSEFASIRRKAKDILAKEDGLNEIVQ 488
Query: 907 IVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEA 966
+VG DAL E + IL AR+++EDYLQQ++F + D YCP K V M++ ++ FYD + A
Sbjct: 489 LVGKDALAESNKIILETARLIKEDYLQQNSFTKYDKYCPFYKAVLMLKNMVLFYDLSNAA 548
Query: 967 ISRGVPLEEIAKLP---VREEIGR-------MKFEPDV-------GKIKALIDKTNEQFE 1009
+ + + + +K+ ++ +G MKFE G++ L ++ + F
Sbjct: 549 VEKTMSSTDASKITLSIIKNRLGNLMYSLVSMKFEDPADGEEVVKGRLVELGNQLRDAFR 608
Query: 1010 ELFKKY 1015
L ++Y
Sbjct: 609 SLEEEY 614
Score = 250 bits (631), Expect = 7e-65
Identities = 134/245 (54%), Positives = 166/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+VVAD + GA YE+VRVG+ LIGEIIRLEGD A IQ YEETAG++ G+
Sbjct: 13 GVIKKVSGPVVVADKIAGAGCYELVRVGDQNLIGEIIRLEGDTATIQCYEETAGLQVGDI 72
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V T S L+VELGPGLL I+DGIQRPL+ I E +GD FI RGV+ P+L R W FIP
Sbjct: 73 VKRTYSPLAVELGPGLLGQIFDGIQRPLKAIAEASGDCFIPRGVSVPSLDRSHMWEFIPG 132
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
+++GD GGDI G V E +++ H+IM+PPG +G I IA G+YTI E + +++ G
Sbjct: 133 ALRMGDLATGGDIYGLVHENTLLDHRIMLPPGAKGRISYIAPPGQYTITEKVIELEF-QG 191
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
KE M WPVR RP +KL PL+TGQRV+D FFP GGT AIPG FG GK V
Sbjct: 192 VKKEYSMMNLWPVRSPRPVAQKLLGSTPLLTGQRVLDAFFPSVLGGTCAIPGAFGCGKTV 251
Query: 243 DGDTL 247
L
Sbjct: 252 ISQAL 256
>pir||I50716 A1 isoform of vacuolar H+-ATPase subunit A - chicken
>gi|790617|gb|AAC59680.1| (U22077) A1 isoform of vacuolar
H+-ATPase subunit A [Gallus gallus]
Length = 617
Score = 353 bits (897), Expect = 5e-96
Identities = 183/358 (51%), Positives = 250/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 257 TVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 316
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 317 NMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA 376
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 377 YLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 436
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 437 KKLAQRKHFPSVNWLISYSKYTRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 495
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 496 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMRRRAV 555
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE + MKF+ V KIKA + E + F+
Sbjct: 556 ENTAQSDNKITWSIIRENMSEILYRLTSMKFKDPVKDGETKIKADYAQLFEDMQNAFR 613
Score = 241 bits (609), Expect = 3e-62
Identities = 129/246 (52%), Positives = 160/246 (64%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A +QVYEET+GV G+P
Sbjct: 19 GYVQGVSGPVVTACNMAGAAMYELVRVGHSELVGEIIRLEGDLATVQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISTLTKSIYIPRGVNVSALSRDVKWDFTPS 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGVVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 198 GVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 257
Query: 242 VDGDTL 247
V +L
Sbjct: 258 VISQSL 263
>sp|P11592|VATA_NEUCR VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 67 KD SUBUNIT)
>gi|67953|pir||PXNCV7 H+-transporting ATPase (EC
3.6.1.35), vacuolar, 67K chain - Neurospora crassa
>gi|168926|gb|AAA33621.1| (J03955) vacuolar ATPase vma-1
[Neurospora crassa]
Length = 607
Score = 351 bits (892), Expect = 2e-95
Identities = 172/334 (51%), Positives = 246/334 (73%), Gaps = 6/334 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV ++K+S++ V++Y+GCGERGNEM +VL++FP+L G+ P+M+RT LIANTS
Sbjct: 253 TVISQSVSKFSNSDVIVYVGCGERGNEMAEVLKDFPELSIEVDGRKEPIMKRTTLIANTS 312
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEYFRD G +VA+MADS+SRWAEALREISGRL EMP ++G+PA
Sbjct: 313 NMPVAAREASIYTGITVAEYFRDQGMNVAMMADSSSRWAEALREISGRLGEMPADQGFPA 372
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL +KLA FYERAG+V LGS R GSVS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 373 YLGAKLASFYERAGKVQALGSPPREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 432
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+IN SYS Y+ + D W++ P++ +RD+ +LL EL ++V++
Sbjct: 433 KKLAQRKHFPSINTSVSYSKYL-TILDKWYEREYPDFPRLRDRIRQLLSDSEELDQVVQL 491
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG AL + ++ L +A +++ED+LQQ+ + + D +CP K MM++++ F+D+ +AI
Sbjct: 492 VGKSALSDPDKITLDMATLIKEDFLQQNGYSDYDQFCPIWKTEWMMKLMMGFHDEAQKAI 551
Query: 968 SRGVPLEEI--AKLPVREEIGRMKFE-PDVGKIK 998
++G ++ A ++ ++ +KFE P G+ K
Sbjct: 552 AQGQNWNKVREATQDLQAQLKSLKFEVPSEGQEK 585
Score = 265 bits (669), Expect = 2e-69
Identities = 136/240 (56%), Positives = 166/240 (68%), Gaps = 3/240 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+I V+GP+VVA+ M G MYE+V+VG L+GE+IR+ GD+A IQVYEETAGV G+P
Sbjct: 16 GKIYSVSGPVVVAEDMIGVAMYELVKVGHDQLVGEVIRINGDQATIQVYEETAGVMVGDP 75
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V+ TG LSVELGPGLL +IYDGIQRPLE I E + +I RG+ PAL R KKW F P
Sbjct: 76 VLRTGKPLSVELGPGLLNNIYDGIQRPLEKIAEASNSIYIPRGIATPALDRKKKWEFTPT 135
Query: 124 VKVGDKVVGGDIIGEVPETSIIT-HKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
+KVGD + GGD+ G V E S I+ HKI++PP G I IAE+GEYT+EE I +V+ G
Sbjct: 136 MKVGDHIAGGDVWGTVYENSFISVHKILLPPRARGTITRIAEKGEYTVEEKILEVEF-DG 194
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
+ E M Q WPVRV RP EK P + GQRV+D FP +GGT AIPG FG GK V
Sbjct: 195 KKTEYPMMQTWPVRVPRPAAEKHSANQPFLVGQRVLDALFPSVQGGTVAIPGAFGCGKTV 254
>sp|P31406|VATA_SCHPO VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 67 KDA SUBUNIT)
>gi|283082|pir||S25334 H+-transporting ATPase (EC
3.6.1.35) chain A, vacuolar - fission yeast
(Schizosaccharomyces pombe) >gi|1065902|emb|CAA48573.1|
(X68580) vacuolar H+-ATPase subunit A
[Schizosaccharomyces pombe] >gi|5706506|emb|CAB52268.1|
(AL109739) vacuolar atp synthase catalytic subunit a
[Schizosaccharomyces pombe]
Length = 619
Score = 351 bits (892), Expect = 2e-95
Identities = 179/351 (50%), Positives = 249/351 (69%), Gaps = 12/351 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP--LMERTVLIANTS 727
TV L+K+S++ +++Y+GCGERGNEM +VL +FP+L GKP +M+RT L+ANTS
Sbjct: 265 TVISQSLSKYSNSDLIVYVGCGERGNEMAEVLMDFPELTIDINGKPEPIMKRTTLVANTS 324
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEY+RD G +V++MADSTSRWAEALREISGRL EMP + GYPA
Sbjct: 325 NMPVAAREASIYTGITLAEYYRDQGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPA 384
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL +KLA FYERAGR LGS R G+VS++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 385 YLGAKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 444
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+IN SYS Y++A++ W+ + V P + +RD+ +++Q+E + EI+++
Sbjct: 445 KKLAQRKHFPSINTSLSYSKYINALQPWYEERV-PGFNTLRDQIKQIIQQEDSMLEIIQL 503
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG AL E ++ L +A +++ D+LQQ+ + + D CP K MMR ++ +Y K A+
Sbjct: 504 VGKSALSETDKVTLDIAGIIKNDFLQQNGYSDYDRCCPLYKTYHMMRNMIAYYTKAKSAV 563
Query: 968 SRG-VPLEEI--AKLPVREEIGRMKFE-PDVGKIKALIDKTNEQFEELFKK 1014
G VP +I + + E+ MKFE P+ G+ + + E +E L KK
Sbjct: 564 ETGSVPWSKIKESTSDIFYELTSMKFENPNEGEKEIV-----EHYETLHKK 609
Score = 231 bits (583), Expect = 3e-59
Identities = 131/316 (41%), Positives = 182/316 (57%), Gaps = 12/316 (3%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I V+GP+VVA M G MYE+VRVG L+GE+IR+ DK IQVYEET+G+ G+P
Sbjct: 26 GSIFSVSGPVVVAANMLGCSMYELVRVGHEELVGEVIRIHQDKCTIQVYEETSGLTVGDP 85
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPK 123
V TG LSVELGPGL +IYDGIQRPL+ I +K+ +I RG+ +L R+ KW F P
Sbjct: 86 VQRTGKPLSVELGPGLAETIYDGIQRPLKQIFDKSQSIYIPRGINTESLNREHKWDFTPN 145
Query: 124 --VKVGDKVVGGDIIGEVPETSIIT-HKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTP 180
+++GD V GGD+ G V E S+ HKIM+PP G + IAE G Y ++E + +V+
Sbjct: 146 KDLRIGDHVSGGDVFGSVFENSLFNDHKIMLPPRARGTVTYIAEAGSYHVDEKLLEVEF- 204
Query: 181 SGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGK 240
+G+ M WPVR RP + L PL+TGQRV+D +P +GGT AIPG FG GK
Sbjct: 205 NGKKHSFSMLHTWPVRAARPVADNLTANQPLLTGQRVLDALYPCVQGGTTAIPGAFGCGK 264
Query: 241 CVDGDTLVLTKEFGLI-------KIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKD 293
V +L LI + ++ ++L + T++ N + + + TL
Sbjct: 265 TVISQSLSKYSNSDLIVYVGCGERGNEMAEVLMDFPELTIDINGKPEPIMKRTTLVANTS 324
Query: 294 GKIVEIKATHVYKGFS 309
V + +Y G +
Sbjct: 325 NMPVAAREASIYTGIT 340
>sp|Q29048|VATA_PIG VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|1082966|pir||A56807
H+-transporting ATP synthase (EC 3.6.1.34), vacuolar
type, catalytic chain - pig >gi|1968|emb|CAA44213.1|
(X62338) H+ ATPase [Sus scrofa]
Length = 618
Score = 351 bits (890), Expect = 3e-95
Identities = 182/358 (50%), Positives = 251/358 (69%), Gaps = 15/358 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ V+IY+GCGER NEM++VL +FP+L GK +M+RT L+ANTS
Sbjct: 258 TVISQSLSKYSNSDVIIYVGCGERVNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTS 317
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT++EYFRDMGY V++MA+STSRWAEALREISGRL EMP + GYPA
Sbjct: 318 NMPVAAREASIYTGITLSEYFRDMGYHVSMMANSTSRWAEALREISGRLAEMPADSGYPA 377
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL ++LA FYERAGRV LG+ R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD
Sbjct: 378 YLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD 437
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EIV++
Sbjct: 438 KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQL 496
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG +L E ++ L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+
Sbjct: 497 VGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDLARRAV 556
Query: 968 SRGVPLE-EIAKLPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+ +I +RE +G MKF+ V KIKA + E + F+
Sbjct: 557 ETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDVQNAFR 614
Score = 242 bits (612), Expect = 1e-62
Identities = 129/246 (52%), Positives = 161/246 (65%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A IQVYEET+GV G+P
Sbjct: 20 GYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDP 79
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I +T +I RGV AL RD KW F P
Sbjct: 80 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDVKWEFTPS 139
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I H+IM+PP G + IA G Y +V+ +++
Sbjct: 140 KNLRVGSHITGGDIYGIVNENSLIKHRIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 198
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP +GGT AIPG FG GK
Sbjct: 199 GVKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT 258
Query: 242 VDGDTL 247
V +L
Sbjct: 259 VISQSL 264
>emb|CAB51771.1| (AJ009881) vacuolar ATPase subunit a [Eremothecium gossypii]
Length = 617
Score = 348 bits (884), Expect = 2e-94
Identities = 171/348 (49%), Positives = 247/348 (70%), Gaps = 11/348 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTS 727
TV L+K+S++ +IY+GCGERGNEM +VL EFP+L G+ P+M+RT L+ANTS
Sbjct: 264 TVISQSLSKYSNSDAIIYVGCGERGNEMAEVLMEFPELFTEVNGRKEPIMKRTTLVANTS 323
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEYFRD G +V+++ADS+SRWAEALREISGRL EMP ++G+PA
Sbjct: 324 NMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPA 383
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL +KLA FYERAG+ V LGS RVGSVS++ AVSP GGDFS+PV +TL + +VFW LD
Sbjct: 384 YLGAKLASFYERAGKAVALGSPDRVGSVSIVAAVSPAGGDFSDPVTTSTLGITQVFWGLD 443
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+IN SYS Y + + ++ N PE+ +RD+ E+L EL+++V++
Sbjct: 444 KKLAQRKHFPSINTSVSYSKYTNVLNKYYDSNY-PEFPVLRDRIKEILSNAEELEQVVQL 502
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG AL ++++ +L VA +++ED+LQQ+ + D +CP K MM+ ++++D+ +++
Sbjct: 503 VGKSALSDKDKIVLDVATLIKEDFLQQNGYSTYDAFCPIWKTYDMMKAFVSYFDEAQKSV 562
Query: 968 SRGVPLEEIAKL--PVREEIGRMK-FEPDVGKIKALIDKTNEQFEELF 1012
S G +++ V+ + K FEP G+ + + +FE+LF
Sbjct: 563 SNGANWAVLSEATGDVKHAVSSSKFFEPSRGE-----REVHAEFEKLF 605
Score = 260 bits (658), Expect = 5e-68
Identities = 134/246 (54%), Positives = 173/246 (69%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+I V+GP+VVA+ M G MYE+V+VG L+GE+IRL+GDKA IQVYEETAGV G+P
Sbjct: 26 GQIYSVSGPVVVAENMVGCAMYELVKVGHHNLVGEVIRLDGDKATIQVYEETAGVTVGDP 85
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPGL+ +IYDGIQRPL+ I+E++ +I RGV APAL R+ KW F P
Sbjct: 86 VLRTGKPLSVELGPGLMETIYDGIQRPLKAIKEQSQSIYIPRGVDAPALSREVKWAFKPG 145
Query: 123 KVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
K+ VGD + GGDI G + E S++ HKI++PP G I IA GEYT++E + +V+
Sbjct: 146 KLGVGDHISGGDIFGSIFENSLLEDHKILLPPRARGTITWIAPAGEYTVDETVLEVEF-D 204
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G+ M+ WPVRV RP EKL + PL+TGQRV+D+ FP +GGT IPG FG GK
Sbjct: 205 GKKYSYSMFHTWPVRVPRPVTEKLSADYPLLTGQRVLDSLFPCVQGGTTCIPGAFGCGKT 264
Query: 242 VDGDTL 247
V +L
Sbjct: 265 VISQSL 270
>emb|CAA98761.1| (Z74233) ORF YDL184w-b [Saccharomyces cerevisiae]
Length = 617
Score = 345 bits (875), Expect = 2e-93
Identities = 172/352 (48%), Positives = 244/352 (68%), Gaps = 12/352 (3%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTS 727
TV L+K+S++ +IY+GCGERGNEM +VL EFP+L +G +P+M+RT L+ANTS
Sbjct: 264 TVISQSLSKYSNSDAIIYVGCGERGNEMAEVLMEFPELYTEMSGTKEPIMKRTTLVANTS 323
Query: 728 NMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA 787
NMPVAAREASIYTGIT+AEYFRD G +V+++ADS+SRWAEALREISGRL EMP ++G+PA
Sbjct: 324 NMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPA 383
Query: 788 YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALD 847
YL +KLA FYERAG+ V LGS R GSVS++ AVSP GGDFS+PV TL + +VFW LD
Sbjct: 384 YLGAKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFWGLD 443
Query: 848 ADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
LA+R+HFP+IN SYS Y + + ++ N PE+ +RD+ E+L EL+++V++
Sbjct: 444 KKLAQRKHFPSINTSVSYSKYTNVLNKFYDSNY-PEFPVLRDRMKEILSNAEELEQVVQL 502
Query: 908 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAI 967
VG AL + ++ L VA +++ED+LQQ+ + D +CP K MMR ++++D+ +A+
Sbjct: 503 VGKSALSDSDKITLDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAV 562
Query: 968 SRGVPLEEIAKL--PVREEIGRMKF------EPDV-GKIKALIDKTNEQFEE 1010
+ G ++A V+ + KF E +V G+ + L+ E+F E
Sbjct: 563 ANGANWSKLADSTGDVKHAVSSSKFFEPSRGEKEVHGEFEKLLSTMQERFAE 614
Score = 257 bits (649), Expect = 5e-67
Identities = 132/246 (53%), Positives = 171/246 (68%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I V+GP+V+A+ M G MYE+V+VG L+GE+IR++GDKA IQVYEETAG+ G+P
Sbjct: 26 GAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQVYEETAGLTVGDP 85
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPGL+ +IYDGIQRPL+ I+E++ +I RG+ PAL R KW F P
Sbjct: 86 VLRTGKPLSVELGPGLMETIYDGIQRPLKAIKEESQSIYIPRGIDTPALDRTIKWQFTPG 145
Query: 123 KVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
K +VGD + GGDI G V E S+I +HKI++PP G I IA GEYT++E I +V+
Sbjct: 146 KFQVGDHISGGDIYGSVFENSLISSHKILLPPRSRGTITWIAPAGEYTLDEKILEVEF-D 204
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G+ + +Y WPVRV RP EKL + PL+TGQRV+D FP +GGT IPG FG GK
Sbjct: 205 GKKSDFTLYHTWPVRVPRPVTEKLSADYPLLTGQRVLDALFPCVQGGTTCIPGAFGCGKT 264
Query: 242 VDGDTL 247
V +L
Sbjct: 265 VISQSL 270
>pir||I50715 A2 isoform of vacuolar H+-ATPase subunit A - chicken
>gi|790615|gb|AAC59679.1| (U22076) A2 isoform of vacuolar
H+-ATPase subunit A [Gallus gallus]
>gi|1098356|prf||2115408A vacuolar H
ATPase:SUBUNIT=A:ISOTYPE=A2 [Gallus gallus]
Length = 611
Score = 344 bits (872), Expect = 4e-93
Identities = 178/346 (51%), Positives = 242/346 (69%), Gaps = 15/346 (4%)
Query: 682 AQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTSNMPVAAREASIY 739
+ V+IY+GCGERGNEM++VL +FP+L GK +M+RT L+ANTSNMPVAAREASIY
Sbjct: 263 SDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIY 322
Query: 740 TGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
TGIT++EYFRDMGY V++MADSTSRWAEALREISGRL EMP + GYPAYL ++LA FYER
Sbjct: 323 TGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYER 382
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
AGRV LG+ R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++
Sbjct: 383 AGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSV 442
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERA 919
NWL SYS Y A+ +++ K+ E+ +R KA E+LQ+E +L EIV++VG +L E ++
Sbjct: 443 NWLISYSKYTRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKI 501
Query: 920 ILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLE-EIAK 978
L VA+++++D+LQQ+ + D +CP K V M+ ++ FYD A+ + +I
Sbjct: 502 TLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMRRRAVENTAQSDNKITW 561
Query: 979 LPVREEIGR-------MKFEPDV----GKIKALIDKTNEQFEELFK 1013
+RE + MKF+ V KIKA + E + F+
Sbjct: 562 SIIRENMSEILYRLTSMKFKDPVKDGETKIKADYAQLFEDMQNAFR 607
Score = 217 bits (548), Expect = 4e-55
Identities = 116/223 (52%), Positives = 146/223 (65%), Gaps = 4/223 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G + V+GP+V A M GA MYE+VRVG L+GEIIRLEGD A +QVYEET+GV G+P
Sbjct: 19 GYVQGVSGPVVTACNMAGAAMYELVRVGHSELVGEIIRLEGDLATVQVYEETSGVSVGDP 78
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPG++ +I+DGIQRPL I T +I RGV AL RD KW F P
Sbjct: 79 VLRTGKPLSVELGPGIMGAIFDGIQRPLSDISTLTKSIYIPRGVNVSALSRDVKWDFTPS 138
Query: 123 -KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++VG + GGDI G V E S+I HKIM+PP G + IA G Y +V+ +++
Sbjct: 139 KNLRVGSHITGGDIYGVVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-E 197
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQ 224
G ++ M Q WPVR RP EKLP PL+TGQRV+D FP+
Sbjct: 198 GVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPK 240
>sp|P38078|VATA_CANTR VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A [CONTAINS: VMA1-DERIVED
ENDONUCLEASE (VDE) (PI-CTR I ENDONUCLEASE)]
>gi|1076955|pir||A46080 H+-transporting ATPase (EC
3.6.1.35) chain A precursor, vacuolar - yeast (Candida
tropicalis) >gi|170889|gb|AAB03895.1| (M64984) ORF
[Candida tropicalis]
Length = 1088
Score = 330 bits (838), Expect = 4e-89
Identities = 170/350 (48%), Positives = 238/350 (67%), Gaps = 15/350 (4%)
Query: 672 TQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGK--PLMERTVLIANTSNM 729
T HQ + + + CGERGNEM +VL EFP+L +G+ P+M+RT L+ANTSNM
Sbjct: 740 TDHQFLL---SNMALVHNCGERGNEMAEVLMEFPELFTEISGRKEPIMKRTTLVANTSNM 796
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGIT+AEYFRD G +V+++ADS+SRWAEALREISGRL EMP ++G+PAYL
Sbjct: 797 PVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYL 856
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+KLA FYERAG+ LGS RVGSVS++ AVSP GGDFS+PV +TL + +VFW LD
Sbjct: 857 GAKLASFYERAGKATALGSPDRVGSVSIVAAVSPAGGDFSDPVTTSTLGITQVFWGLDKK 916
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
LA+R+HFP+IN SYS Y + + ++ N PE+ +RDK E+L EL+++V++VG
Sbjct: 917 LAQRKHFPSINTSVSYSKYTNVLNKYYDSNY-PEFPQLRDKIREILSNAEELEQVVQLVG 975
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISR 969
AL + ++ L VA +++ED+LQQ+ + D +CP K MMR +++YD+ +AI+
Sbjct: 976 KSALSDSDKITLDVATLIKEDFLQQNGYSSYDAFCPIWKTFDMMRAFISYYDEAQKAIAN 1035
Query: 970 GVPLEEIAK--LPVREEIGRMK-FEPDVGKIKA------LIDKTNEQFEE 1010
G ++A+ V+ + K FEP G+ + L+ +E+F E
Sbjct: 1036 GAQWSKLAESTSDVKHAVSSAKFFEPSRGQKEGEKEFGDLLTTISERFAE 1085
Score = 250 bits (632), Expect = 5e-65
Identities = 127/246 (51%), Positives = 170/246 (68%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+I V+GP+V+A+ M G MYE+V+VG L+GE+IR+ GDKA IQVYEETAGV G+P
Sbjct: 26 GQIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRINGDKATIQVYEETAGVTVGDP 85
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPGL+ +IYDGIQRPL+ I++++ +I RG+ PAL R ++ F P
Sbjct: 86 VLRTGKPLSVELGPGLMETIYDGIQRPLKAIKDESQSIYIPRGIDVPALSRTVQYDFTPG 145
Query: 123 KVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
++KVGD + GGDI G + E S++ HKI++PP G I IAE G Y +EE + +V+
Sbjct: 146 QLKVGDHITGGDIFGSIYENSLLDDHKILLPPRARGTITSIAEAGSYNVEEPVLEVEF-D 204
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G+ + M WPVRV RP EKL + PL+TGQRV+D+ FP +GGT IPG FG GK
Sbjct: 205 GKKHKYSMMHTWPVRVPRPVAEKLTADHPLLTGQRVLDSLFPCVQGGTTCIPGAFGCGKT 264
Query: 242 VDGDTL 247
V +L
Sbjct: 265 VISQSL 270
>dbj|BAA89598.1| (AB036926) vacuolar H+-ATPase A subunit [Citrus unshiu]
Length = 317
Score = 328 bits (833), Expect = 1e-88
Identities = 166/305 (54%), Positives = 222/305 (72%), Gaps = 10/305 (3%)
Query: 716 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGR 775
+M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGR
Sbjct: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGR 61
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
L EMP + GYPAYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV
Sbjct: 62 LAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSA 121
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELL 895
TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ +++ DP++ +R KA E+L
Sbjct: 122 TLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVL 180
Query: 896 QKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRV 955
Q+E +L EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR
Sbjct: 181 QREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRN 240
Query: 956 LLNFYDKTMEAISRGVPL--EEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNE 1006
+++FY+ +A+ +G + ++I ++ +G + KFE AL+ K +
Sbjct: 241 IIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKK 300
Query: 1007 QFEEL 1011
E+L
Sbjct: 301 LHEDL 305
>gi|6320016 vacuolar ATPase V1 domain subunit A (69 kDa); Tfp1p [Saccharomyces
cerevisiae] >gi|137464|sp|P17255|VATA_YEAST VACUOLAR ATP
SYNTHASE CATALYTIC SUBUNIT A [CONTAINS: ENDONUCLEASE
PI-SCEI (VMA1-DERIVED ENDONUCLEASE) (VDE) (SCE VMA
INTEIN)] >gi|67951|pir||PXBYVA H+-transporting ATPase (EC
3.6.1.35) chain A precursor, vacuolar - yeast
(Saccharomyces cerevisiae) >gi|171650|gb|AAA34664.1|
(J05409) H+-ATPase subunit a [Saccharomyces cerevisiae]
>gi|1004309|emb|CAA58261.1| (X83276) ORF D1286
[Saccharomyces cerevisiae] >gi|1431301|emb|CAA98760.1|
(Z74233) ORF YDL185w [Saccharomyces cerevisiae]
Length = 1071
Score = 328 bits (832), Expect = 2e-88
Identities = 167/339 (49%), Positives = 235/339 (69%), Gaps = 13/339 (3%)
Query: 683 QVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTSNMPVAAREASIYT 740
QVV++ CGERGNEM +VL EFP+L +G +P+M+RT L+ANTSNMPVAAREASIYT
Sbjct: 732 QVVVH-NCGERGNEMAEVLMEFPELYTEMSGTKEPIMKRTTLVANTSNMPVAAREASIYT 790
Query: 741 GITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERA 800
GIT+AEYFRD G +V+++ADS+SRWAEALREISGRL EMP ++G+PAYL +KLA FYERA
Sbjct: 791 GITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERA 850
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
G+ V LGS R GSVS++ AVSP GGDFS+PV TL + +VFW LD LA+R+HFP+IN
Sbjct: 851 GKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSIN 910
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAI 920
SYS Y + + ++ N PE+ +RD+ E+L EL+++V++VG AL + ++
Sbjct: 911 TSVSYSKYTNVLNKFYDSNY-PEFPVLRDRMKEILSNAEELEQVVQLVGKSALSDSDKIT 969
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKL- 979
L VA +++ED+LQQ+ + D +CP K MMR ++++D+ +A++ G ++A
Sbjct: 970 LDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAVANGANWSKLADST 1029
Query: 980 -PVREEIGRMKF------EPDV-GKIKALIDKTNEQFEE 1010
V+ + KF E +V G+ + L+ E+F E
Sbjct: 1030 GDVKHAVSSSKFFEPSRGEKEVHGEFEKLLSTMQERFAE 1068
Score = 257 bits (649), Expect = 5e-67
Identities = 132/246 (53%), Positives = 171/246 (68%), Gaps = 4/246 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I V+GP+V+A+ M G MYE+V+VG L+GE+IR++GDKA IQVYEETAG+ G+P
Sbjct: 26 GAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQVYEETAGLTVGDP 85
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ TG LSVELGPGL+ +IYDGIQRPL+ I+E++ +I RG+ PAL R KW F P
Sbjct: 86 VLRTGKPLSVELGPGLMETIYDGIQRPLKAIKEESQSIYIPRGIDTPALDRTIKWQFTPG 145
Query: 123 KVKVGDKVVGGDIIGEVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPS 181
K +VGD + GGDI G V E S+I +HKI++PP G I IA GEYT++E I +V+
Sbjct: 146 KFQVGDHISGGDIYGSVFENSLISSHKILLPPRSRGTITWIAPAGEYTLDEKILEVEF-D 204
Query: 182 GEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKC 241
G+ + +Y WPVRV RP EKL + PL+TGQRV+D FP +GGT IPG FG GK
Sbjct: 205 GKKSDFTLYHTWPVRVPRPVTEKLSADYPLLTGQRVLDALFPCVQGGTTCIPGAFGCGKT 264
Query: 242 VDGDTL 247
V +L
Sbjct: 265 VISQSL 270
>gb|AAB63978.1| (M21609) transmembrane ATPase-like protein [Saccharomyces cerevisiae]
Length = 1031
Score = 325 bits (825), Expect = 1e-87
Identities = 166/339 (48%), Positives = 234/339 (68%), Gaps = 13/339 (3%)
Query: 683 QVVIYIGCGERGNEMTDVLEEFPKLKDPKTG--KPLMERTVLIANTSNMPVAAREASIYT 740
QVV++ CGERGNEM +VL EFP+L +G +P+M+RT L+ANTSNMPVAAREASIYT
Sbjct: 692 QVVVH-NCGERGNEMAEVLMEFPELYTEMSGTKEPIMKRTTLVANTSNMPVAAREASIYT 750
Query: 741 GITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERA 800
GIT+AEYFRD G +V+++ADS+SRWAEALREISGRL EMP ++G+PAYL +KLA FYERA
Sbjct: 751 GITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERA 810
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
G+ V LGS R GSVS++ AVSP GDFS+PV TL + +VFW LD LA+R+HFP+IN
Sbjct: 811 GKAVALGSPDRTGSVSIVAAVSPADGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSIN 870
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAI 920
SYS Y + + ++ N PE+ +RD+ E+L EL+++V++VG AL + ++
Sbjct: 871 TSVSYSKYTNVLNKFYDSNY-PEFPVLRDRMKEILSNAEELEQVVQLVGKSALSDSDKIT 929
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKL- 979
L VA +++ED+LQQ+ + D +CP K MMR ++++D+ +A++ G ++A
Sbjct: 930 LDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAVANGANWSKLADST 989
Query: 980 -PVREEIGRMKF------EPDV-GKIKALIDKTNEQFEE 1010
V+ + KF E +V G+ + L+ E+F E
Sbjct: 990 GDVKHAVSSSKFFEPSRGEKEVHGEFEKLLSTMQERFAE 1028
Score = 242 bits (610), Expect = 2e-62
Identities = 125/231 (54%), Positives = 160/231 (69%), Gaps = 4/231 (1%)
Query: 20 MKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEPVIGTGSSLSVELGPG 79
M G MYE+V+VG L+GE+IR++GDKA IQVYEETAG+ G+PV+ TG LSVELGPG
Sbjct: 1 MIGCAMYELVKVGHDNLVGEVIRIDGDKATIQVYEETAGLTVGDPVLRTGKPLSVELGPG 60
Query: 80 LLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP-KVKVGDKVVGGDIIG 137
L+ +IYDGIQRPL+ I+E++ +I RG+ PAL R KW F P K +VGD + GGDI G
Sbjct: 61 LMETIYDGIQRPLKAIKEESQSIYIPRGIDTPALDRTIKWQFTPGKFQVGDHISGGDIYG 120
Query: 138 EVPETSII-THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVR 196
V E S+I +HKI++PP G I IA GEYT++E I +V+ G+ + +Y WPVR
Sbjct: 121 SVFENSLISSHKILLPPRSRGTITWIAPAGEYTLDEKILEVEF-DGKKSDFTLYHTWPVR 179
Query: 197 VKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
V RP EKL + PL+TGQRV+D FP +GGT IPG FG GK V +L
Sbjct: 180 VPRPVTEKLSADYPLLTGQRVLDALFPCVQGGTTCIPGAFGCGKTVISQSL 230
>pir||S18887 H+-transporting ATPase (EC 3.6.1.35) catalytic chain, renal - pig
(fragment)
Length = 374
Score = 307 bits (778), Expect = 4e-82
Identities = 154/279 (55%), Positives = 209/279 (74%), Gaps = 8/279 (2%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEE---FPKLKDPKTGK--PLMERTVLIA 724
TV L+K+S++ V+IY+GCGE EM + FP+L GK +M+RT L+A
Sbjct: 99 TVISQSLSKYSNSDVIIYVGCGEE--EMRCLKSSGSGFPELTMEVDGKVESIMKRTALVA 156
Query: 725 NTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
NTSNMPVAAREASIYTGIT++EYFRDMGY V++MA+STSRWAEA REISGRL EMP + G
Sbjct: 157 NTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMANSTSRWAEAHREISGRLAEMPADSG 216
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
YPAYL ++LA FYERAGRV LG+ R GSV+++GAVSPPGGDFS+PV TL +V+VFW
Sbjct: 217 YPAYLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFW 276
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
LD LA+R+HFP++NWL SYS Y+ A+ +++ K+ E+ +R KA E+LQ+E +L EI
Sbjct: 277 GLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF-TEFVPLRTKAKEILQEEEDLAEI 335
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTY 943
V++VG +L E ++ L VA+++++D+LQQ+ + D +
Sbjct: 336 VQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF 374
Score = 97.1 bits (238), Expect = 9e-19
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 143 SIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYK 202
S+I H+IM+PP G + IA G Y +V+ +++ G ++ M Q WPVR RP
Sbjct: 2 SLIKHRIMLPPRNRGTVTYIAPPGNYDTSDVVLELEF-EGVKEKFSMVQVWPVRQVRPVT 60
Query: 203 EKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
EKLP PL+TGQRV+D FP +GGT AIPG FG GK V +L
Sbjct: 61 EKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSL 105
>gb|AAB40515.1| (U18938) vacuolar-ATPase catalytic subunit-A [Giardia intestinalis]
Length = 654
Score = 298 bits (755), Expect = 2e-79
Identities = 157/350 (44%), Positives = 221/350 (62%), Gaps = 44/350 (12%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKL--------------KDPKTG-K 714
TV ++K+ + V++YIGCGERGNEM ++L +FP++ ++ KT
Sbjct: 261 TVVSQSISKYGNTDVIVYIGCGERGNEMAEILTDFPEMTFEAKKRVIGPSGQQEIKTVVS 320
Query: 715 PLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISG 774
+ RTVL+ANTSNMPVAAREASIYTGITI+E+FRD GY+V L+ADSTSRWAEALREISG
Sbjct: 321 DIFSRTVLVANTSNMPVAAREASIYTGITISEFFRDQGYNVTLLADSTSRWAEALREISG 380
Query: 775 RLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSD------------------------- 809
RL +PGE GYPA L SKL+ FYERAGRV+ LG+
Sbjct: 381 RLGGIPGEGGYPADLTSKLSHFYERAGRVICLGNSNGAWSPENILDPTSGAISSTEQGLL 440
Query: 810 ---YRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYS 866
R+GSVSVIGAVSP GD S+ V +TL +V+VFW L +LA +HFP+++WL SYS
Sbjct: 441 QPGQRIGSVSVIGAVSPAAGDLSDAVAVSTLAIVQVFWGLSKNLANGKHFPSVDWLISYS 500
Query: 867 LYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVARM 926
+ + W++ D + ++KA LLQ E +QE ++VG D+L + E+ IL V +
Sbjct: 501 RCTETLAPWYNAR-DISFLTNKEKAKTLLQNEVAIQETAQLVGYDSLDDSEKLILDVCNL 559
Query: 927 LREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEI 976
++E +LQQ+++ D +CP K M+R ++++Y+ A+ +G +E+
Sbjct: 560 IQEGFLQQNSYTVYDKFCPFIKTDLMLRNIVHYYESCKTALGQGHSYQEL 609
Score = 187 bits (469), Expect = 7e-46
Identities = 115/255 (45%), Positives = 149/255 (58%), Gaps = 15/255 (5%)
Query: 3 AKGRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPG 62
+ G I + GP+V A M G M+EV VG+ LIGEII+L+GD AVIQVYE+T+G+
Sbjct: 8 SNGLIQSIAGPVVTATNMTGCFMFEVCYVGKARLIGEIIQLKGDSAVIQVYEDTSGLEVN 67
Query: 63 EPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFI 121
+ V +G LSV LGPGLL+SIYDGIQRPLE I + T FI RG++APAL +++W F
Sbjct: 68 DCVYKSGRLLSVHLGPGLLSSIYDGIQRPLEKIAQITNSHFIPRGISAPALDLERRWTFR 127
Query: 122 PKVKVGDKVVGGDIIGEVPETSIITHKIMVPP-------------GIEGEIVEIAEEGEY 168
P VK+GD + GDI G VPE ++ KIM+ E + + Y
Sbjct: 128 PLVKLGDLLSVGDIFGIVPENDLLECKIMLQSMDSTRLQMRKRTFQAERLLKYVRPTDAY 187
Query: 169 TI-EEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKG 227
T+ +E V +G+ + PVR + +KLP PLITGQR +D FP A G
Sbjct: 188 TVKDEEKILVLEYAGQRYYYGLAHYHPVRSPKKVFKKLPCINPLITGQRTLDGLFPLAIG 247
Query: 228 GTAAIPGPFGSGKCV 242
TAAIPG FG GK V
Sbjct: 248 ATAAIPGGFGCGKTV 262
>pir||B72121 ATP synthase, chain A CP0686 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39) >gi|4376347|gb|AAD18241.1|
(AE001594) ATP Synthase Subunit A [Chlamydophila
pneumoniae CWL029] >gi|7189600|gb|AAF38495.1| (AE002227)
ATP synthase, subunit A [Chlamydophila pneumoniae AR39]
>gi|8978461|dbj|BAA98298.1| (AP002545) ATP synthase
subunit A [Chlamydophila pneumoniae J138]
Length = 591
Score = 284 bits (720), Expect = 3e-75
Identities = 146/292 (50%), Positives = 196/292 (67%), Gaps = 3/292 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QH L+K++ +VI CGER E+ +VL+EFP L DP TGK LM RT +I NTS+M
Sbjct: 249 TVLQHHLSKYAAVDIVILCACGERAGEVVEVLQEFPHLIDPHTGKSLMHRTCIICNTSSM 308
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+SIY G+TIAEY+R MG D+ L+ADSTSRWA+ALREISGRLEE+PGEE +PAYL
Sbjct: 309 PVAARESSIYLGVTIAEYYRQMGLDILLLADSTSRWAQALREISGRLEEIPGEEAFPAYL 368
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+S++A FYER G + T D GS+++ GAVSP GG+F EPV Q+TL VV F L
Sbjct: 369 SSRIAAFYERGGAITT--KDGSEGSLTICGAVSPAGGNFEEPVTQSTLAVVGAFCGLSKA 426
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
A R +P+I+ L S+S Y++ V + V W KA + L+K SE+ + + +VG
Sbjct: 427 RADARRYPSIDPLISWSKYLNQVGQILEEKVS-GWGGAVKKAAQFLEKGSEIGKRMEVVG 485
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYD 961
+ + + I L A + YLQQ+AFD VD YCP E+Q+ + ++ +D
Sbjct: 486 EEGVSMEDMEIYLKAELYDFCYLQQNAFDPVDCYCPFERQIELFSLISRIFD 537
Score = 148 bits (371), Expect = 2e-34
Identities = 92/244 (37%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 3 AKGRIIRVTGPL--VVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVR 60
A+G +I G L V DG V V L E+I + + +QV+E+T G
Sbjct: 9 AQGHVIEAYGNLLRVRFDGYVRQGEVAYVNVDNTWLKAEVIEVADQEVKVQVFEDTQGAC 68
Query: 61 PGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHF 120
G V +G L ELGPGLL I+DG+Q LEV+ E + F+ RG A+ W++
Sbjct: 69 RGALVTFSGHLLEAELGPGLLQGIFDGLQNRLEVLAEDSS-FLQRGKHVNAISDHNLWNY 127
Query: 121 IPKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVE--IAEEGEYTIEEVIAKVK 178
P VGD + GD++G VPE THKIMVP E+ + EG Y V+AK +
Sbjct: 128 TPVASVGDTLRRGDLLGTVPEGRF-THKIMVPFSCFQEVTLTWVISEGTYNAHTVVAKAR 186
Query: 179 TPSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGS 238
G+ M QRWP++ EK+P + G R++DT P KGGT PGPFG+
Sbjct: 187 DAQGKECAFTMVQRWPIKQAFIEGEKIPAHKIMDVGLRILDTQIPVLKGGTFCTPGPFGA 246
Query: 239 GKCV 242
GK V
Sbjct: 247 GKTV 250
>pir||E81687 ATP synthase, chain A TC0582 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190620|gb|AAF39416.1| (AE002326) ATP
synthase, subunit A [Chlamydia muridarum]
Length = 591
Score = 275 bits (697), Expect = 1e-72
Identities = 141/291 (48%), Positives = 194/291 (66%), Gaps = 3/291 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QH L+K++ +V+ CGER E+ ++L+EFP L DP TG+ LM RT +I NTS+M
Sbjct: 249 TVLQHHLSKYAAVDIVVLCACGERAGEVVEILQEFPHLTDPHTGQSLMHRTCIICNTSSM 308
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+SIY GITIAEY+R MG V L+ADSTSRWA+ALREISGRLEE+PGEE +PAYL
Sbjct: 309 PVAARESSIYLGITIAEYYRQMGLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPAYL 368
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS++A FYER G V D GS+++ GAVSP GG+F EPV Q TL VV F L
Sbjct: 369 ASRIAAFYERGGAVKM--KDGSEGSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKA 426
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
A R +P+I+ + S+S Y+D+V + K V P W KA L++ +E+ + + +VG
Sbjct: 427 RADARRYPSIDPMISWSKYLDSVAEILEKKV-PGWGDSVKKASRFLEEGAEIGKRIEVVG 485
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFY 960
+ + + I L + + YLQQ+AFD D YCP ++Q+ + ++ + +
Sbjct: 486 EEGISMEDIEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMSHIF 536
Score = 157 bits (394), Expect = 4e-37
Identities = 98/243 (40%), Positives = 131/243 (53%), Gaps = 6/243 (2%)
Query: 4 KGRIIRVTGPL--VVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRP 61
+G ++ G L V DG V V + L EII + GD+ +QV+EET G+
Sbjct: 10 QGYVVEAYGNLLRVHFDGHVRQGEVAYVSVDDTWLKAEIIEVVGDEVKVQVFEETQGISR 69
Query: 62 GEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFI 121
G V +G L ELGPGLL I+DG+Q LEV+ + T F+ RG A+ R+ W +
Sbjct: 70 GALVTFSGHLLEAELGPGLLQGIFDGLQNRLEVLAD-TSLFLKRGEYVNAICRETVWAYT 128
Query: 122 PKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGI--EGEIVEIAEEGEYTIEEVIAKVKT 179
K VGD + GD++G V E HKIMVP E I + G+YT++ VIAK +T
Sbjct: 129 QKASVGDVLSRGDVLGTVKEGRF-DHKIMVPFSCFEEVTITWVISSGDYTVDTVIAKGRT 187
Query: 180 PSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSG 239
SG E M Q+WP++ EK+P + G RV+DT P KGGT PGPFG+G
Sbjct: 188 ASGAELEFTMVQKWPIKQAFLEGEKVPSHEIMDVGLRVLDTQIPVLKGGTFCTPGPFGAG 247
Query: 240 KCV 242
K V
Sbjct: 248 KTV 250
>pir||B71531 probable ATP synthase chain A - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3328724|gb|AAC67901.1| (AE001303) ATP
Synthase Subunit A [Chlamydia trachomatis]
Length = 591
Score = 275 bits (695), Expect = 2e-72
Identities = 139/292 (47%), Positives = 195/292 (66%), Gaps = 3/292 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QH L+K++ +V+ CGER E+ ++L+EFP L DP TG+ LM RT +I NTS+M
Sbjct: 249 TVLQHHLSKYAAVDIVVLCACGERAGEVVEILQEFPHLTDPHTGQSLMHRTCIICNTSSM 308
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAARE+SIY GITIAEY+R MG + L+ADSTSRWA+ALREISGRLEE+PGEE +PAYL
Sbjct: 309 PVAARESSIYLGITIAEYYRQMGLHILLLADSTSRWAQALREISGRLEEIPGEEAFPAYL 368
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
AS++A FYER G V D GS+++ GAVSP GG+F EPV Q TL VV F L
Sbjct: 369 ASRIAAFYERGGAVKM--KDGSEGSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKA 426
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
A R +P+I+ + S+S Y+D+V + K V P W +A L++ +E+ + + +VG
Sbjct: 427 RADARRYPSIDPMISWSKYLDSVAEILEKKV-PGWGESVKQASRFLEEGAEIGKRIEVVG 485
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYD 961
+ + + I L + + YLQQ+AFD D YCP ++Q+ + ++ + ++
Sbjct: 486 EEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMNHIFN 537
Score = 156 bits (390), Expect = 1e-36
Identities = 96/243 (39%), Positives = 130/243 (52%), Gaps = 6/243 (2%)
Query: 4 KGRIIRVTGPL--VVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRP 61
+G ++ G L V DG V V + L EII + GD+ IQV+EET G+
Sbjct: 10 QGYVVEAYGNLLRVHVDGHVRQGEVAYVSVDDTWLKAEIIEVVGDEVKIQVFEETQGISR 69
Query: 62 GEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFI 121
G V +G L ELGPGLL I+DG+Q LE++ + T F+ RG A+ R+ W +
Sbjct: 70 GALVTFSGHLLEAELGPGLLQGIFDGLQNRLEILAD-TSLFLRRGEYVNAICRETVWAYT 128
Query: 122 PKVKVGDKVVGGDIIGEVPETSIITHKIMVPPGI--EGEIVEIAEEGEYTIEEVIAKVKT 179
K VG + GD++G V E HKIMVP E I + G YT++ V+AK +T
Sbjct: 129 QKASVGSVLSRGDVLGTVKEGRF-DHKIMVPFSCFEEVTITWVISSGNYTVDTVVAKGRT 187
Query: 180 PSGEIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSG 239
+GE E M Q+WP++ EK+P + G RV+DT P KGGT PGPFG+G
Sbjct: 188 STGEELEFTMVQKWPIKQAFLEGEKVPSHEIMDVGLRVLDTQIPVLKGGTFCTPGPFGAG 247
Query: 240 KCV 242
K V
Sbjct: 248 KTV 250
>pir||F70111 V-type ATPase, subunit A (atpA) homolog - Lyme disease spirochete
>gi|2687979|gb|AAC66483.1| (AE001122) V-type ATPase,
subunit A (atpA) [Borrelia burgdorferi]
Length = 551
Score = 262 bits (663), Expect = 1e-68
Identities = 142/296 (47%), Positives = 191/296 (63%), Gaps = 13/296 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV Q ++ +D VVI CGER E+ + L+EFP+L DPKTGK LM+RT +I NTS+M
Sbjct: 221 TVLQQVTSRNADVDVVIIAACGERAGEVVETLKEFPELMDPKTGKSLMDRTCIICNTSSM 280
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YT ITI EY+R MG D+ L+ADSTSRWA+A+RE+SGRLEE+PGEE +PAYL
Sbjct: 281 PVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYL 340
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S +A FYERAG VV D +GSV+V G+VSP GG+F EPV Q TL+VV F L +
Sbjct: 341 ESVIASFYERAGIVVLNNGD--IGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRE 398
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
+ R FPAI+ L S+S Y K V + K + A L K +E+ +++++VG
Sbjct: 399 RSDARKFPAISPLESWSKY---------KGVIDQKKT--EYARSFLVKGNEINQMMKVVG 447
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTME 965
+ + + I L + +L YLQQ++FD +D E+Q M ++ N E
Sbjct: 448 EEGISNDDFLIYLKSELLDSCYLQQNSFDSIDAAVSSERQNYMFDIVYNILKTNFE 503
Score = 182 bits (456), Expect = 2e-44
Identities = 104/223 (46%), Positives = 139/223 (61%), Gaps = 6/223 (2%)
Query: 25 MYEVVRVGELG--LIGEIIRLEGDKAVIQVYEETAGVRPGEPVIGTGSSLSVELGPGLLT 82
M EV+ V G L E+IR+ G++ QV+E T G+ G+ V T L+VELGPGLLT
Sbjct: 1 MNEVLFVKTAGRNLKAEVIRIRGNEVDAQVFELTKGISVGDLVEFTDKLLTVELGPGLLT 60
Query: 83 SIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFIPKVKVGDKVVGGDIIGEVPET 142
+YDG+Q PL + + G F+ RGV L +DKKW+F KVGD V+ GD +G V E
Sbjct: 61 QVYDGLQNPLPELAIQCGFFLERGVYLRPLNKDKKWNFKKTSKVGDIVIAGDFLGFVIE- 119
Query: 143 SIITHKIMVP--PGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVK-R 199
+ H+IM+P +IVEI +G+Y+I+E IA ++ SG + M WPV+V
Sbjct: 120 GTVHHQIMIPFYKRDSYKIVEIVSDGDYSIDEQIAVIEDDSGMRHNITMSFHWPVKVPIT 179
Query: 200 PYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
YKE+L P P++T R+IDTFFP AKGGT IPGPFG+GK V
Sbjct: 180 NYKERLIPSEPMLTQTRIIDTFFPVAKGGTFCIPGPFGAGKTV 222
>pir||S18313 Na+-transporting ATPase (EC 3.6.1.-) alpha chain - Enterococcus
hirae (fragment)
Length = 359
Score = 259 bits (654), Expect = 1e-67
Identities = 137/284 (48%), Positives = 190/284 (66%), Gaps = 7/284 (2%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+II+V+GPLV+A+ M A + ++ VG+LG+IGEII + D A IQVYEET+G+ PGEP
Sbjct: 4 GKIIKVSGPLVMAENMSEASIQDMCLVGDLGVIGEIIEMRQDVASIQVYEETSGIGPGEP 63
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPK 123
V TG +LSVELGPG+++ ++DGIQRPL+ E T +F+ RGV PAL +K W F
Sbjct: 64 VRSTGEALSVELGPGIISQMFDGIQRPLDTFMEVTQSNFVGRGVQLPALDHEKPWWFEGT 123
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
++ G + G++IG + ET +I KIMVP GI+G + +I E G +TI++ I ++T G
Sbjct: 124 IEGGTEGSSGNLIGYLDETKVIQPKIMVPNGIKGTVQKI-ESGSFTIDDPICVIETEQG- 181
Query: 184 IKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVD 243
+KEL M Q+WPVR RP K+KL P+VP+ITGQRVIDTFFP KGG AA+PGPFG+GK V
Sbjct: 182 LKELTMMQKWPVRRGRPIKQKLNPDVPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTVV 241
Query: 244 GDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
+ + L+ +Y +G + + E+ EL P T
Sbjct: 242 QHQIAKWSDVDLV----VYVGCGERGNEMTDVVNEFPELIDPNT 281
Score = 190 bits (479), Expect = 5e-47
Identities = 92/120 (76%), Positives = 103/120 (85%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QHQ+AKWSD +V+Y+GCGERGNEMTDV+ EFP+L DP TG+ LMERTVLIANTSNM
Sbjct: 239 TVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGESLMERTVLIANTSNM 298
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREASIYTGITIAEYFR MG +A+MA+S WAEA E S RLEEMPG+EGYPAYL
Sbjct: 299 PVAAREASIYTGITIAEYFRKMGNKLAIMANSPFWWAEAPPENSRRLEEMPGDEGYPAYL 358
>pir||G71325 probable V-type ATPase, subunit A (atpA-1) - syphilis spirochete
>gi|3322709|gb|AAC65412.1| (AE001220) V-type ATPase,
subunit A (atpA-1) [Treponema pallidum]
Length = 589
Score = 254 bits (643), Expect = 3e-66
Identities = 138/291 (47%), Positives = 192/291 (65%), Gaps = 17/291 (5%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QH ++ +D VV+ CGER E+ + L EFP L DP+TG+ LMERTV++ NTS+M
Sbjct: 246 TVLQHSTSRNADVDVVVIAACGERAGEVVETLREFPDLTDPRTGRSLMERTVIVCNTSSM 305
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVA+REAS+YTG+T+AEY+R MG DV L+ADSTSRWA+ALRE+SGRLEE+PGEE +PAYL
Sbjct: 306 PVASREASVYTGVTLAEYYRQMGLDVLLLADSTSRWAQALREMSGRLEEIPGEEAFPAYL 365
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
S +A FYERAG VV L S + GSV++ G VSP GG+F EPV Q TL+VV F L +
Sbjct: 366 ESCIAAFYERAG-VVRLRSGEK-GSVTIGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRE 423
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
+ R +PA++ L S+S Y + + +A+ L++ +E+++++R+VG
Sbjct: 424 RSDARRYPAVHPLDSWSKYPSVL----------DARAVA-YGRSFLRRGAEVEQMMRVVG 472
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQ----VTMMRVL 956
+ + + L L YLQQ++FD VD+ P +Q +MRVL
Sbjct: 473 EEGTSMEDFLVYLKGSFLDSVYLQQNSFDTVDSAVPVARQKHCYAIVMRVL 523
Score = 207 bits (522), Expect = 4e-52
Identities = 120/246 (48%), Positives = 149/246 (59%), Gaps = 10/246 (4%)
Query: 4 KGRIIRVTGPLVVA--DGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRP 61
KG + V G +V +G+ V VG L EIIR+ G +A +QV+E T GV
Sbjct: 5 KGIVSAVNGNMVSVTFEGVVSLNEVGYVHVGNARLKAEIIRVRGREAQLQVFEITRGVSV 64
Query: 62 GEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGDFIARGVTAPALPRDKKWHFI 121
G+ V TG LSVELGPGLL +YDG+Q PL ++ EK G F+ RGV PAL R +W F
Sbjct: 65 GDRVEFTGDLLSVELGPGLLGQVYDGLQNPLPLLAEKVGYFLERGVYLPALSRTSEWMFT 124
Query: 122 PKVKVGDKVVGGDIIGEVPETSIITHKIMVP--PGIEGEIVEIAEEGEYTIEEVIAKVKT 179
P V VG++VV GD++G PE + H+IMVP G E+V I G Y + +VIA+V+
Sbjct: 125 PHVSVGERVVRGDVLGYTPE-GALKHRIMVPFHMGDSYEVVFIQTAGTYRVHDVIARVRD 183
Query: 180 PSGEIKELKMYQRWPVRVKRP---YKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPF 236
G EL M RWP VKRP Y E+L P PL+T R IDTFFP AKGGT IPGPF
Sbjct: 184 AQGHEHELTMAFRWP--VKRPVHCYAERLKPTEPLVTSIRTIDTFFPVAKGGTYCIPGPF 241
Query: 237 GSGKCV 242
G+GK V
Sbjct: 242 GAGKTV 247
>emb|CAA71931.1| (Y11038) BV-70/5 [Beta vulgaris]
Length = 332
Score = 252 bits (638), Expect = 1e-65
Identities = 129/245 (52%), Positives = 166/245 (67%), Gaps = 3/245 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G I +V+GP+VVADGM GA MYE+VRVG LIGEIIRLEGD A IQVYEET G+ +P
Sbjct: 22 GYIRKVSGPVVVADGMNGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETGGLTVNDP 81
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIP- 122
V+ T LSVELGPG+L +I+DGIQRPL+ I +++GD +I RGV+ P L +D +W F P
Sbjct: 82 VLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPPLDKDTQWDFQPK 141
Query: 123 KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSG 182
K+ VGD + GGD+ V E S++ H + +PP G+I IA G YTI++ + +++ G
Sbjct: 142 KLGVGDLLTGGDLYAIVDENSLMQHHVALPPDAMGKITYIAPAGNYTIQDTVLELEF-QG 200
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCV 242
+K+ M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V
Sbjct: 201 VVKKFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTV 260
Query: 243 DGDTL 247
L
Sbjct: 261 ISQAL 265
Score = 85.4 bits (208), Expect = 3e-15
Identities = 42/74 (56%), Positives = 55/74 (73%), Gaps = 3/74 (4%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 259 TVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 318
Query: 727 SNMPVAAREASIYT 740
SNMPVAAREASIYT
Sbjct: 319 SNMPVAAREASIYT 332
>pir||S13589 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
Methanococcus thermolithotrophicus (fragment)
>gi|226473|prf||1513503A H ATPase [Methanococcus
thermolithotrophicus]
Length = 310
Score = 250 bits (633), Expect = 4e-65
Identities = 121/150 (80%), Positives = 134/150 (88%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TVTQHQLAKWSD VV+YIGCGERGNEMT+V+EEFP L+D KT LM+RTVLIANTSNM
Sbjct: 161 TVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLEDIKTVNKLMDRTVLIANTSNM 220
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
PVAAREAS+YTGITIAEYFRDMGY V L ADSTSRWAEA+REISGRLEEMPGEEGYPAYL
Sbjct: 221 PVAAREASVYTGITIAEYFRDMGYGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYL 280
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIG 819
AS+LA+FYERAGRV LGSD + G + ++G
Sbjct: 281 ASRLAQFYERAGRVNCLGSDDKQGFICIVG 310
Score = 199 bits (500), Expect = 2e-49
Identities = 106/205 (51%), Positives = 136/205 (65%), Gaps = 7/205 (3%)
Query: 80 LLTSIYDGIQRPLEVIREKTGD-FIARGVTAPALPRDKKWHFIPKVKVGDKVVGGDIIGE 138
++ ++YDGIQRPL I +TG FI RGV P+LPRD KW F P V VGD V GD+IG
Sbjct: 1 MMKAMYDGIQRPLTAIETETGSIFIPRGVHVPSLPRDVKWDFTPTVNVGDIVSEGDVIGT 60
Query: 139 VPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVK 198
VPET I HKIMVP G+ G++ EI + G +T+EE +A ++T +G+ KE+ M Q+WPVR
Sbjct: 61 VPETPSIIHKIMVPVGVNGKVKEI-KSGSFTVEETVAVIETENGD-KEVTMMQKWPVRKP 118
Query: 199 RPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTLVLTKEFGLIKI 258
RP+K KLPP +PLITGQRV DTFF AKGGT+AIPGPFGSGK V L + ++
Sbjct: 119 RPHKGKLPPIIPLITGQRVEDTFFGLAKGGTSAIPGPFGSGKTVTQHQLAKWSDVDVV-- 176
Query: 259 KDLYKILDGKGKKTVNGNEEWTELE 283
+Y +G + EE+ LE
Sbjct: 177 --VYIGCGERGNEMTEVIEEFPHLE 199
>gb|AAA79992.1| (U36438) V-ATPase 66 kDa subunit [Acer pseudoplatanus]
Length = 336
Score = 250 bits (631), Expect = 7e-65
Identities = 120/181 (66%), Positives = 147/181 (80%), Gaps = 3/181 (1%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 155 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 214
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 215 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 274
Query: 787 AYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWAL 846
AYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW L
Sbjct: 275 AYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGL 334
Query: 847 D 847
+
Sbjct: 335 E 335
Score = 134 bits (334), Expect = 5e-30
Identities = 69/162 (42%), Positives = 97/162 (59%), Gaps = 3/162 (1%)
Query: 88 IQRPLEVIREKTGDF-IARGVTAPALPRDKKWHFIPK-VKVGDKVVGGDIIGEVPETSII 145
IQRPL+ I + +GD + RGV PAL +D W F PK + GD + GGD+ E S++
Sbjct: 1 IQRPLKTIAKISGDVCVPRGVAVPALDKDILWEFQPKKIGEGDLLTGGDLYATAFENSLM 60
Query: 146 THKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEKL 205
H + +PP G++ IA G+Y++++ + +++ G K++ M Q WPVR RP KL
Sbjct: 61 QHHVALPPDGMGKVTYIAPPGQYSLKDTVLELEF-QGVKKKITMLQTWPVRTPRPVASKL 119
Query: 206 PPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
+ PL+TGQRV+D FP GGT AIPG FG GK V L
Sbjct: 120 AADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL 161
>emb|CAA44922.1| (X63285) 73 kDa subunit of Na+-ATPase [Enterococcus hirae]
>gi|228238|prf||1801236A Na ATPase:SUBUNIT=alpha
[Enterococcus hirae]
Length = 328
Score = 240 bits (605), Expect = 8e-62
Identities = 128/271 (47%), Positives = 177/271 (65%), Gaps = 7/271 (2%)
Query: 18 DGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEPVIGTGSSLSVELG 77
+ M A + ++ VG+LG+IGEII + D A IQVYEET+G+ PGEPV TG +LSVELG
Sbjct: 1 ENMSEASIQDMCLVGDLGVIGEIIEMRQDVASIQVYEETSGIGPGEPVRSTGEALSVELG 60
Query: 78 PGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPKVKVGDKVVGGDII 136
PG+++ ++DGIQRPL+ E T +F+ RGV PAL +K W F ++ G + G++I
Sbjct: 61 PGIISQMFDGIQRPLDTFMEVTQSNFVGRGVQLPALDHEKPWWFEGTIEGGTEGSSGNLI 120
Query: 137 GEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVR 196
G + ET +I KIMVP GI+G + +I E G +TI++ I ++T G +KEL M Q+WPVR
Sbjct: 121 GYLDETKVIQPKIMVPNGIKGTVQKI-ESGSFTIDDPICVIETEQG-LKELTMMQKWPVR 178
Query: 197 VKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTLVLTKEFGLI 256
RP K+KL P+VP+ITGQRVIDTFFP KGG AA+PGPFG+GK V + + L+
Sbjct: 179 RGRPIKQKLNPDVPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTVVQHQIAKWSDVDLV 238
Query: 257 KIKDLYKILDGKGKKTVNGNEEWTELERPIT 287
+Y +G + + E+ EL P T
Sbjct: 239 ----VYVGCGERGNEMTDVVNEFPELIDPNT 265
Score = 162 bits (405), Expect = 2e-38
Identities = 79/106 (74%), Positives = 89/106 (83%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
TV QHQ+AKWSD +V+Y+GCGERGNEMTDV+ EFP+L DP TG+ LMERTVLIANTSNM
Sbjct: 223 TVVQHQIAKWSDVDLVVYVGCGERGNEMTDVVNEFPELIDPNTGESLMERTVLIANTSNM 282
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGR 775
PVAAREASIYTGITIAEYFR MG +A+MA+S WAEA E S R
Sbjct: 283 PVAAREASIYTGITIAEYFRKMGNKLAIMANSPFWWAEAPPENSRR 328
>emb|CAA54241.1| (X76913) v-type Na-ATPase [Enterococcus hirae]
Length = 187
Score = 188 bits (472), Expect = 3e-46
Identities = 97/186 (52%), Positives = 133/186 (71%), Gaps = 3/186 (1%)
Query: 5 GRIIRVTGPLVVADGMKGAKMYEVVRVGELGLIGEIIRLEGDKAVIQVYEETAGVRPGEP 64
G+II+V+GPLV+A+ M A + ++ VG+LG+IGEII + D A IQVYEET+G+ PGEP
Sbjct: 4 GKIIKVSGPLVMAENMSEASIQDMCLVGDLGVIGEIIEMRQDVASIQVYEETSGIGPGEP 63
Query: 65 VIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPALPRDKKWHFIPK 123
V TG +LSVELGPG+++ ++DGIQRPL+ E T +F+ RGV PAL +K+W F
Sbjct: 64 VRSTGEALSVELGPGIISQMFDGIQRPLDTFMEVTQSNFLGRGVQLPALDHEKQWWFEAT 123
Query: 124 VKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGE 183
++ G +V GDIIG V ET II HKIMVP GI+G + +I E G +TI++ I ++T G
Sbjct: 124 IEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI-ESGSFTIDDPICVIETEQG- 181
Query: 184 IKELKM 189
+KEL M
Sbjct: 182 LKELTM 187
>gb|AAF18994.1|AF212304_1 (AF212304) vacuolar H+-ATPase catalytic subunit [Allium cepa]
Length = 183
Score = 183 bits (461), Expect = 6e-45
Identities = 89/131 (67%), Positives = 108/131 (81%), Gaps = 3/131 (2%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANT 726
TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANT
Sbjct: 53 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANT 112
Query: 727 SNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYP 786
SNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYP
Sbjct: 113 SNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYP 172
Query: 787 AYLASKLAEFY 797
AYLA++LA FY
Sbjct: 173 AYLAARLASFY 183
Score = 71.8 bits (173), Expect = 4e-11
Identities = 33/59 (55%), Positives = 36/59 (60%)
Query: 189 MYQRWPVRVKRPYKEKLPPEVPLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
M Q WPVR RP KL + PL+TGQRV+D FP GGT AIPG FG GK V L
Sbjct: 1 MLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL 59
>dbj|BAA94379.1| (AB033377) vacuolar H+-ATPase subunit A [Nepenthes alata]
Length = 101
Score = 171 bits (428), Expect = 5e-41
Identities = 81/101 (80%), Positives = 92/101 (90%)
Query: 731 VAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLA 790
VAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA
Sbjct: 1 VAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 60
Query: 791 SKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
++LA FYERAG+V LGS R GSV+++GAVSPPGGDFS+P
Sbjct: 61 ARLASFYERAGKVKCLGSPERTGSVTIVGAVSPPGGDFSDP 101
>pir||E64477 replication factor C homolog - Methanococcus jannaschii
>gi|1592072|gb|AAB99433.1| (U67583) activator 1
(replication factor C), 35 KD subunit [Methanococcus
jannaschii]
Length = 1847
Score = 151 bits (378), Expect = 3e-35
Identities = 134/423 (31%), Positives = 206/423 (48%), Gaps = 78/423 (18%)
Query: 234 GPFGSGKCVDGDTLVLT----KEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLY 289
GP G GKC+ GDT V+ +E G + + +I +GK T+ N + ++
Sbjct: 47 GPPGVGKCLTGDTKVIVNGEIREIGEV----IEEISNGKFGVTLTNNLKVLGID------ 96
Query: 290 GYKDGKIVEIKATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAK 349
+DGKI E +VYK + +I+I+T+ GR++KVT H L KNG EI+ A+
Sbjct: 97 --EDGKIREFDVQYVYKDKTNTLIKIKTKMGRELKVTTYHPLLINH--KNG-EIKWEKAE 151
Query: 350 DLKKGDRIIVAKKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADG--TLK 407
+LK GD++ + I E +E+LAE+LGY I DG +
Sbjct: 152 NLKVGDKLATPRYILFNE-------------------SDYNEELAEWLGYFIGDGHADKE 192
Query: 408 PRTVAIYNNDESLLRRANELANELF---NIEGKIVKGRTVKALLIHSKALVEFFSKLGVP 464
+ N DE L +R EL +LF I+ +I K RT + ++SK VEF KLG+
Sbjct: 193 SNKITFTNGDEKLRKRFAELTEKLFKDAKIKERIHKDRT-PDIYVNSKEAVEFIDKLGL- 250
Query: 465 RNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLL 524
R KKA ++PKE++ S + ++AF++AY CDG + K I + TAS+E A Y L
Sbjct: 251 RGKKADKVRIPKEIMRS--DALRAFLRAYFDCDGGIE--KHSIVLSTASKEMAEDLVYAL 306
Query: 525 AKLGIYAIIREKI--IGDKVYYRVVISGESNLE--------------KLGIERVGRGYTS 568
+ GI A +REK+ +KVYY +VIS SNL K +E + +
Sbjct: 307 LRFGIIAKLREKVNKNNNKVYYHIVISNSSNLRTFLDNIGFSQERKLKKLLEIIKDENPN 366
Query: 569 YDIVPVEVEELYNALGRPYAELKRAGIEIHNYLSGENMSYEMFRKFAK------FVGMEE 622
D++ ++ E++ R +L R + +N SY RK + + +EE
Sbjct: 367 LDVITIDKEKIRYIRDRLKVKLTRD-------IEKDNWSYNKCRKITQELLKEIYYRLEE 419
Query: 623 IAE 625
+ E
Sbjct: 420 LKE 422
>pir||S65525 H+-transporting ATPase (EC 3.6.1.35), vacuolar chain a (clone
70-3) - maize (fragment) >gi|1480426|emb|CAA63117.1|
(X92373) V-type H+-ATPase [Zea mays]
Length = 212
Score = 132 bits (330), Expect = 1e-29
Identities = 69/158 (43%), Positives = 95/158 (59%), Gaps = 3/158 (1%)
Query: 92 LEVIREKTGD-FIARGVTAPALPRDKKWHFIP-KVKVGDKVVGGDIIGEVPETSIITHKI 149
L+ I K+GD +I RGV+ PAL +D W F P K+ VGD + GGD+ V E +++ H +
Sbjct: 1 LKTIAIKSGDVYIPRGVSVPALDKDVLWEFQPTKLGVGDVITGGDLYATVFENTLMQHHV 60
Query: 150 MVPPGIEGEIVEIAEEGEYTIEEVIAKVKTPSGEIKELKMYQRWPVRVKRPYKEKLPPEV 209
+PPG G+I IA G+Y +++ + +++ G K+ M Q WPVR RP KL +
Sbjct: 61 ALPPGSMGKISYIAPAGQYNLQDTVLELEF-QGIKKKFTMLQTWPVRSPRPVASKLAADT 119
Query: 210 PLITGQRVIDTFFPQAKGGTAAIPGPFGSGKCVDGDTL 247
PL+TGQRV+D FP GGT IPG FG GK V L
Sbjct: 120 PLLTGQRVLDALFPSVLGGTCCIPGAFGCGKTVISQAL 157
>sp|P54647|VATA_DICDI VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT A (V-ATPASE 69 KD SUBUNIT)
(V-ATPASE A-SUBUNIT) >gi|904099|gb|AAA70420.1| (L43963)
vacuolar proton transporting ATPase subunit A
[Dictyostelium discoideum]
Length = 129
Score = 130 bits (324), Expect = 7e-29
Identities = 66/128 (51%), Positives = 89/128 (68%), Gaps = 3/128 (2%)
Query: 54 EETAGVRPGEPVIGTGSSLSVELGPGLLTSIYDGIQRPLEVIREKT-GDFIARGVTAPAL 112
+ET+G+ G+PV+ T L+VELGPG++ +I+DGIQRPL I E T G +I RG+ P+L
Sbjct: 1 QETSGLTVGDPVLRTHKPLTVELGPGIMNNIFDGIQRPLNAIAEITFGIYIPRGINTPSL 60
Query: 113 PRDKKWHFIP--KVKVGDKVVGGDIIGEVPETSIITHKIMVPPGIEGEIVEIAEEGEYTI 170
R KW + P K+KVGD V GGDI G+V E ++I HKIMVPP G IVEIA GEYT+
Sbjct: 61 NRTIKWPYQPDTKLKVGDNVSGGDIFGQVVENNLIIHKIMVPPKEMGTIVEIAPAGEYTL 120
Query: 171 EEVIAKVK 178
+ + ++
Sbjct: 121 DHALLTIE 128
>gb|AAF24768.1|AF218356_1 (AF218356) vacuolar H+-ATPase catalytic subunit [Allium cepa]
Length = 189
Score = 119 bits (295), Expect = 2e-25
Identities = 68/179 (37%), Positives = 106/179 (58%), Gaps = 11/179 (6%)
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
VFW LD A+R+HFP++NWL SYS Y A++ ++ K D ++ +R KA E+LQ+E +L
Sbjct: 1 VFWGLDKK-AQRKHFPSVNWLISYSKYSKALESFYDK-FDSDFIDIRTKAREVLQREDDL 58
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYD 961
EIV++VG DAL E ++ L A++LREDYL Q+AF D +CP K V MMR +++F
Sbjct: 59 NEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNT 118
Query: 962 KTMEAISRGVPL--EEIAKLPVREEIGRM-------KFEPDVGKIKALIDKTNEQFEEL 1011
+A+ RG ++I ++ +G + KFE L+ K + +++L
Sbjct: 119 LANQAVERGAGSDGQKITYSVIKHRLGDLFYRLVSQKFEDPAEGEDVLVAKFKKLYDDL 177
>sp|P42466|ATPB_HERAU ATP SYNTHASE BETA CHAIN >gi|560837|emb|CAA54203.1| (X76876) ATPase
beta-subunit [Herpetosiphon aurantiacus]
Length = 471
Score = 116 bits (288), Expect = 1e-24
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 13/260 (5%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
++ G GER E D++ E K P T + + ++TV++ N P AR + +T+A
Sbjct: 178 VFAGVGERSREGNDLIHEMKDSKIPGTDQTVFDKTVMVFGQMNEPPGARLRVALSALTMA 237
Query: 746 EYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVT 805
EYFR+ G DV L D+ R+ +A E+S L MP + GY L +++ E ER
Sbjct: 238 EYFREEGRDVLLFVDNIFRFTQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERI----- 292
Query: 806 LGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSY 865
+ + GS++ + AV P D+++P T + +L+ ++ + +PA++ L S
Sbjct: 293 --TSTKTGSITSLQAVYVPADDYTDPAPATTFAHLDATISLERSISEKGIYPAVDPLAST 350
Query: 866 SLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVAR 925
S +D V E + + +LQ+ +LQ+I+ I+G + L + ++ + AR
Sbjct: 351 SRILDP------NIVGEEHYRVATEVQRMLQRYKDLQDIIAILGVEELSDDDKLTVSRAR 404
Query: 926 MLREDYLQQDAFDEVDTYCP 945
L + Q EV T P
Sbjct: 405 KLERFFSQPFGVAEVFTNIP 424
>pir||F71231 probable replication factor C subunit - Pyrococcus horikoshii
>gi|3256498|dbj|BAA29181.1| (AP000001) 855aa long
hypothetical replication factor C subunit [Pyrococcus
horikoshii]
Length = 855
Score = 116 bits (288), Expect = 1e-24
Identities = 113/392 (28%), Positives = 182/392 (45%), Gaps = 88/392 (22%)
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPE-VPLITGQR-VIDTFFPQAKGGTAA---IPGPFG 237
E++E+K+ +++P+ EK P+ + I GQ ++ K G+ GP G
Sbjct: 6 EVREVKV-------LEKPWVEKYRPQRLDEIVGQEHIVKRLKHYVKTGSMPHLLFAGPPG 58
Query: 238 SGKCVDGDTLVLTKEFGLIKIKDLYKILDG--------KGKKTVNGNEEWTELERPITLY 289
GKC+ GDT V+ L ++++L + + G KG K + +E
Sbjct: 59 VGKCLTGDTKVIANG-QLFELRELVEKISGGKFGPTPVKGLKVIGIDE------------ 105
Query: 290 GYKDGKIVEIKATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAK 349
DGK+ E + +VYK + +I IRTR GR++KVTP H L R +NG EI+ V A+
Sbjct: 106 ---DGKLREFEVQYVYKDKTERLIRIRTRLGRELKVTPYHPLLVNR--RNG-EIKWVKAE 159
Query: 350 DLKKGDRIIVAKKIDGGERVKLNIRVEQKRGKKIRIPDVL-DEKLAEFLGYLIADG--TL 406
+LK GD++ V + +P V ++ LAE+LGY + G
Sbjct: 160 ELKPGDKLAVPR----------------------FLPIVTGEDPLAEWLGYFLGGGYADS 197
Query: 407 KPRTVAIYNNDESLLRRANELANELFNIE--GKIVKGRTVKALLIHSKALVEFFSKLGVP 464
K + N D L +R EL +LF+ +I + ++SK ++ + LG
Sbjct: 198 KENLIMFTNEDPLLRQRFMELTEKLFSDARIREITHENGTSKVYVNSKKALKLVNSLG-- 255
Query: 465 RNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLL 524
+PKE +++F++AY C+G N I + TAS+E + +Y L
Sbjct: 256 ------NAHIPKECW----RGIRSFLRAYFDCNGGVKGN--AIVLATASKEMSQEIAYAL 303
Query: 525 AKLGIYAIIREKIIGDKVYYRVVISGESNLEK 556
A GI + I+E YRV+ISG N++K
Sbjct: 304 AGFGIISRIQE--------YRVIISGSDNVKK 327
>gb|AAF22498.1|AF098522_8 (AF098522) F1F0-ATPase subunit beta [Lactobacillus acidophilus]
Length = 478
Score = 113 bits (280), Expect = 1e-23
Identities = 93/346 (26%), Positives = 165/346 (46%), Gaps = 41/346 (11%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
++HN +H + ++ G GER E D+ E ++ +T ++
Sbjct: 166 IIHNIAQEH-------GGISVFTGVGERTREGNDLYFEMK-------ASGVLSKTAMVFG 211
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 212 QMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 271
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y + +++ + ER + + GS++ I AV P D+++P T +
Sbjct: 272 YQPTI-TRMGQLQERI-------TSTKKGSITSIQAVYVPADDYTDPAPSTTFAYLDATT 323
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S +D + V E + + +LQ+ ELQ+I
Sbjct: 324 NLERSLVEQGIYPAVDPLESSSSALDP------EEVGQEHYEVATRVQHVLQRYHELQDI 377
Query: 905 VRIVGPDALPERERAILLVAR----MLREDYLQQDAFDEV-DTYCPPEKQVTMMRVLLNF 959
+ ++G D L + E+ I+ AR L +++ + F V +Y P ++ + +++L+
Sbjct: 378 ISVLGMDELSDEEKLIVARARKVQFFLSQNFFVAEQFTGVPGSYVPIKETIKGFKLILDG 437
Query: 960 Y-DKTMEAISRGV-PLEEIAKLPVREEIGRMKFEPDVGKIKALIDK 1003
+ D E RGV P+E++ K +E+G +P+ KAL++K
Sbjct: 438 HLDDLPEDAFRGVGPIEDVLK--KAQEMGVTPSDPEA---KALLEK 478
>pir||D72404 flagellum-specific ATP synthase - Thermotoga maritima (strain
MSB8) >gi|4980716|gb|AAD35310.1|AE001706_9 (AE001706)
flagellum-specific ATP synthase [Thermotoga maritima]
Length = 438
Score = 112 bits (277), Expect = 2e-23
Identities = 69/203 (33%), Positives = 107/203 (51%), Gaps = 14/203 (6%)
Query: 676 LAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAARE 735
+A+ + A + + GERG E+ + +E G+ ++R++L+ +TS+ P AR
Sbjct: 177 IARNTTADINVLALIGERGREVREFIER-------DLGEEGLKRSILVVSTSDQPALARV 229
Query: 736 ASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAE 795
S+ T +IAE+FRD+GYDV LM DS +RWA A RE+ + E P GYP + + L +
Sbjct: 230 KSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPK 289
Query: 796 FYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRH 855
ERAG SD GS++ I V DF+EP+ +V L LA H
Sbjct: 290 ILERAG-----NSD--KGSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 342
Query: 856 FPAINWLTSYSLYVDAVKDWWHK 878
+PA++ L S S ++ + H+
Sbjct: 343 YPAVDVLASVSRLMNDIVTEEHR 365
>sp|Q03234|ATPB_LACCA ATP SYNTHASE BETA CHAIN >gi|421578|pir||S30597 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Lactobacillus casei
>gi|43972|emb|CAA45840.1| (X64542) ATPase (beta-subunit)
[Lactobacillus casei]
Length = 470
Score = 111 bits (275), Expect = 4e-23
Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + +ME T ++
Sbjct: 168 LIHNIAEEH-------GGISVFTGVGERTREGNDLYFEMKE-------SGVMENTAMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L +P G
Sbjct: 214 QMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GSV+ I A+ P D+++P + T +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKKGSVTSIQAIYVPADDYTDPAPRTTFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E + + ++LQ+ ELQ+I
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTP------EIVGEEHYKVATEVQQVLQRYRELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQVT-MMRVL 956
+ I+G D L + E+ I VAR R + F+ + +Y P E+ V ++L
Sbjct: 381 ISILGMDELSDEEKVI--VARARRVQFFLSQNFNVAERFTGQPGSYVPVEETVKGFKQIL 438
Query: 957 LNFYDKTMEAISRGV-PLEEIAKLPVREEIGRMKFEP 992
YD E R V +EE+ E+ +M F P
Sbjct: 439 EGKYDDYPEDAFRSVGRIEEVV-----EKAKKMGFAP 470
>gb|AAF02210.1| (AF059739) H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus
lactis subsp. cremoris]
Length = 469
Score = 109 bits (271), Expect = 1e-22
Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 39/321 (12%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++E+T ++
Sbjct: 169 LIHNIAQEH-------GGISVFTGVGERTREGNDLYWEMKE-------SGVIEKTAMVFG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 215 QMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 274
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GSV+ I A+ P D+++P +
Sbjct: 275 YQPTLATEMGQLQERI-------TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 327
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E + + +LQ+ ELQ+I
Sbjct: 328 NLERRLTQMGIYPAVDPLASSSRALTP------EIVGEEHYEVAMEVQRVLQRYKELQDI 381
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQV-TMMRVL 956
+ I+G D L + E+ +LV R R + F + +Y P +K V +L
Sbjct: 382 IAILGMDELSDDEK--ILVGRARRIQFFLSQNFHVAEQFTGQPGSYVPIDKTVHDFKEIL 439
Query: 957 LNFYDKTMEAISRGV-PLEEI 976
YD+ E RGV P+E++
Sbjct: 440 EGKYDEVPEDAFRGVGPIEDV 460
>sp|P43451|ATPB_ENTHR ATP SYNTHASE BETA CHAIN >gi|153573|gb|AAA26859.1| (M90060) H+
ATPase [Enterococcus faecalis]
Length = 468
Score = 109 bits (269), Expect = 2e-22
Identities = 90/315 (28%), Positives = 146/315 (45%), Gaps = 38/315 (12%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++E+T ++
Sbjct: 168 LIHNIAQEH-------GGISVFTGVGERTREGNDLYYE---MKD----SGVIEKTAMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 214 QMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GS++ I A+ P D+++P +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E + + +LQ+ ELQ+I
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAP------EIVGEEHYKVATEVQHVLQRYRELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQVTMMR-VL 956
+ I+G D L ++E+ +LV+R R + F+ + +Y P E+ V R +L
Sbjct: 381 IAILGMDELSDQEK--VLVSRARRVQFFLSQNFNVAEQFTGLPGSYVPVEETVKGFREIL 438
Query: 957 LNFYDKTMEAISRGV 971
YD E R V
Sbjct: 439 EGKYDDLPEEAFRSV 453
>pir||H82928 ATP synthase beta chain UU129 [imported] - Ureaplasma urealyticum
>gi|6899088|gb|AAF30535.1|AE002114_2 (AE002114) ATP
synthase beta chain [Ureaplasma urealyticum]
Length = 464
Score = 107 bits (265), Expect = 6e-22
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L+HN H + ++ G GER E D+ E + ++++T L
Sbjct: 162 MQELIHNIAKNH-------GGLSVFAGVGERTREGNDLYYEMAE-------SDVLDKTAL 207
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR +G+T+AE FRD G DV L D+ R+ +A E+S L MP
Sbjct: 208 VFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 267
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ + ER + + GS++ + AV P D ++P T +
Sbjct: 268 AVGYQPTLAFEMGQLQERI-------TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLD 320
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
LD +A +PAI+ L S S +D + V + ++ + +E+LQ+ EL
Sbjct: 321 AKVVLDRAIASLGLYPAISPLQSTSRLLDPLV------VGVKHYSVARRVIEILQRFMEL 374
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQ 934
Q+I+ I+G D L E +R +++ AR +R +YL Q
Sbjct: 375 QDIIAILGMDELSEEDRQLVMRARKVR-NYLSQ 406
>gb|AAD16426.1| (AF101055) ATP synthase subunit beta [Clostridium acetobutylicum]
Length = 466
Score = 107 bits (264), Expect = 8e-22
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 22/287 (7%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
++ G GER E D+ E +KD ++ +T L+ N P AR TG+T+A
Sbjct: 179 VFTGVGERTREGNDLYYE---MKD----SGVINKTALVFGQMNEPPGARMRVALTGLTMA 231
Query: 746 EYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVT 805
EYFRD G DV L D+ R+ +A E+S L +P GY LA+++ ER
Sbjct: 232 EYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLANEMGALQERI----- 286
Query: 806 LGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSY 865
+ + GS++ + AV P D ++P T + L +++ +PA++ L S
Sbjct: 287 --TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSREISNLGIYPAVSPLEST 344
Query: 866 SLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVAR 925
S +D + V E + +K +L++ ELQ+I+ I+G D L + +R LLV R
Sbjct: 345 SRILDP------RIVGEEHYEVANKVKHILERYQELQDIIAILGVDELSDEDR--LLVGR 396
Query: 926 MLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVP 972
R AF + + + Q ++ + + + ++ +P
Sbjct: 397 ARRVQRFLSQAFSVAEQFTGMKGQFVPVKDTIRSFKEILDGKCDDLP 443
>pir||C75198 activator 1, replication factor c, small chain PAB0068 - Pyrococcus
abyssi (strain Orsay) >gi|5457543|emb|CAB49034.1|
(AJ248283) activator 1, replication factor C, small
subunit [Pyrococcus abyssi]
Length = 1437
Score = 107 bits (264), Expect = 8e-22
Identities = 116/392 (29%), Positives = 185/392 (46%), Gaps = 81/392 (20%)
Query: 183 EIKELKMYQRWPVRVKRPYKEKLPPE-VPLITGQR-VIDTFFPQAKGGTAA---IPGPFG 237
E++E+K+ +++P+ EK P+ + I GQ ++ K G+ GP G
Sbjct: 6 EVREVKV-------LEKPWVEKYRPQKLEEIVGQEHIVKRLKHYVKTGSMPHLLFAGPPG 58
Query: 238 SGKCVDGDTLVLTKEFGLIKIKDLY-KILDGK-GKKTVNGNEEWTELERPITLYGY-KDG 294
GKC+ GD V+ L I +L +I +GK G V G +T+ G +DG
Sbjct: 59 VGKCLTGDAKVIANG-ELTTIGELVERISNGKLGPTPVRG----------LTVLGIDEDG 107
Query: 295 KIVEIKATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKG 354
K+VE+ +VYK ++ +++IRTR GR++KVTP H L R +NG +I V A++LK G
Sbjct: 108 KLVELPVEYVYKDKTSELVKIRTRLGRELKVTPYHPLLVNR--RNG-KIEWVKAEELKPG 164
Query: 355 DRIIVAKKIDGGERVKLNIRVEQKRGKKIRIPDVLDEKLAEFLGYLIADG-TLKPRTVAI 413
DR+ + + LN D LAE+LGY +G T V
Sbjct: 165 DRLAIPSFLP----AMLN-----------------DNPLAEWLGYFFGNGYTDSEERVVF 203
Query: 414 YNNDESLLRRANELANELFNIEGKIVKGRTVKALLIHS--KALVEFFSKLGVPRNKKART 471
+ + L +R EL +LF + +K + K + S K LV+ +K +P +
Sbjct: 204 ESKSKELRKRFMELTRKLF--QDAEIKEDSGKVYVSSSEVKRLVKSLNKDSIPE----QA 257
Query: 472 WKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYA 531
WK +++F++AY C+ E K +I + TA +E A SY LA LGI A
Sbjct: 258 WK-----------GLRSFLRAYFDCNA---EIKDKIIVSTAGKEIAEQISYALAGLGIVA 303
Query: 532 IIREKIIGDKVYYRVVISGESNLEKLGIERVG 563
+ +K V+IS N+ + ++ +G
Sbjct: 304 EVDDK-------GSVIISDPENVSRF-LDEIG 327
>gb|AAD00918.1| (AF001955) proton-translocating ATPase beta subunit [Streptococcus
sanguinis]
Length = 468
Score = 106 bits (263), Expect = 1e-21
Identities = 90/315 (28%), Positives = 143/315 (44%), Gaps = 38/315 (12%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++E+T ++
Sbjct: 168 LIHNIAQEH-------GGISVFTGVGERTREGNDLYWEMKE-------SGVIEKTAMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 214 QMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GSV+ I A+ P D+++P +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E A+ + +LQ+ ELQ+I
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSP------EIVGEEHYAVAAEVKRVLQRYHELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQVT-MMRVL 956
+ I+G D L + E+ LVAR R + F+ + +Y P + V +L
Sbjct: 381 IAILGMDELSDDEKT--LVARARRIQFFLSQNFNVAEQFTGQPGSYVPVAETVRGFKEIL 438
Query: 957 LNFYDKTMEAISRGV 971
+DK E RGV
Sbjct: 439 EGKHDKLPEDAFRGV 453
>sp|P42470|ATPB_WOLSU ATP SYNTHASE BETA CHAIN >gi|587588|emb|CAA54207.1| (X76880) ATPase
beta-subunit [Wolinella succinogenes]
Length = 467
Score = 106 bits (261), Expect = 2e-21
Identities = 81/295 (27%), Positives = 136/295 (45%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++++ L
Sbjct: 165 LIHNVAFKH-------SGYSVFAGVGERTREGNDLYHEMKE-------SGVLDKVALCYG 210
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +TG+T+AEYFRD G DV + D+ R+A++ E+S L +P G
Sbjct: 211 QMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVG 270
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LAS++ + ER + + GS++ + AV P D ++P + +
Sbjct: 271 YQPTLASEMGKLQERI-------TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ +A + +PA++ L S S +D + V + ++LQK +LQ+I
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDP------QVVGEDHYKTATGVQQVLQKYKDLQDI 377
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G D L E ++ ++ AR + E +L Q F P K VT+ L F
Sbjct: 378 IAILGMDELSEEDKRVVERARRI-EKFLSQPFFVAEVFTGSPGKYVTLQETLEGF 431
>sp|P52607|FLII_BORBU FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436104|pir||H70135
flagellum-specific ATP synthase (fliI) homolog - Lyme
disease spirochete >gi|1165272|gb|AAA85611.1| (U43739)
FliI [Borrelia burgdorferi] >gi|2688178|gb|AAC66660.1|
(AE001137) flagellum-specific ATP synthase (fliI)
[Borrelia burgdorferi]
Length = 436
Score = 106 bits (261), Expect = 2e-21
Identities = 76/231 (32%), Positives = 119/231 (50%), Gaps = 20/231 (8%)
Query: 676 LAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAARE 735
+AK S+A V + GERG E+ + +E + G+ ++++VL+ +TS+ +R
Sbjct: 178 IAKNSNADVNVIAFIGERGRELNEFIEH-------ELGEERLKKSVLVVSTSDESPISRY 230
Query: 736 ASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAE 795
Y IAEYFR+ G DVAL+ DS +R+A A RE+S L E P +GYP + ++
Sbjct: 231 KGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPI 290
Query: 796 FYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRH 855
ER+ G + GSV+ V G DF+EPV N V+ LD DL R
Sbjct: 291 LLERS------GFNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGI 344
Query: 856 FPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
+P+IN L+S S + H+ + E + + KA LL + ++++R
Sbjct: 345 YPSINVLSSTSRSI-------HRIMSLEKQKLIMKARNLLSIYKDYEDLIR 388
>gi|11498767 H+-transporting ATP synthase, subunit B (atpB) [Archaeoglobus
fulgidus] >gi|7436117|pir||F69395 H+-transporting ATP
synthase, subunit B (atpB) homolog - Archaeoglobus
fulgidus >gi|2649415|gb|AAB90073.1| (AE001023)
H+-transporting ATP synthase, subunit B (atpB)
[Archaeoglobus fulgidus]
Length = 472
Score = 106 bits (261), Expect = 2e-21
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 29/293 (9%)
Query: 658 FIGGNMPTLLHNTVTQHQLAKWSDAQ------VVIYIGCGERGNEMTDVLEEFPKLKDPK 711
F G +P HN + Q+A+ + + VI+ G E ++EF +
Sbjct: 150 FSGSGLP---HNDIAL-QIARQAKVRGEGEEFAVIFAAMGITYEEAYQFMKEFER----- 200
Query: 712 TGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADST--SRWAEAL 769
TG +ER V+ N +N P R + +T AE+ YD+ ++ T + + EAL
Sbjct: 201 TGA--LERAVVFLNLANDPAIERLLTPRMALTAAEFLA-YEYDLHILVILTDMTNYCEAL 257
Query: 770 REISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFS 829
REIS EE+PG GYP Y+ + LA YERAGR+ R G+++ + ++ PG D +
Sbjct: 258 REISAAREEVPGRRGYPGYMYTDLATIYERAGRI-----RGRKGTITQMPILTMPGDDIT 312
Query: 830 EPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYS-LYVDAVKDWWHKNVDPEWKAMR 888
P+ T + + L +L + +P IN L S S L + + + + + P+W
Sbjct: 313 HPIPDLTGYITEGQIVLSRELHAKGIYPPINVLPSLSRLMKEGIGEGYTREDHPQW---N 369
Query: 889 DKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD 941
D+ + +L+ +V IVG +AL ER+R L A ++QQ +++ D
Sbjct: 370 DQMYAAYAEGVDLRGLVAIVGEEALSERDRLFLKFADEFERRFVQQGRYEDRD 422
>sp|P33253|ATPB_MYCGA ATP SYNTHASE BETA CHAIN >gi|282594|pir||S24339 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Mycoplasma
gallisepticum >gi|44302|emb|CAA45551.1| (X64256)
adenosinetriphosphatase [Mycoplasma gallisepticum]
Length = 471
Score = 105 bits (259), Expect = 3e-21
Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN T H + ++ G GER E D+ E + ++++T L+
Sbjct: 169 LIHNIATGH-------GGLSVFAGVGERTREGNDLYYEMIE-------GGVIDKTALVFG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD+ DV L D+ R+ +A E+S L MP G
Sbjct: 215 QMNEPPGARMRVALTGLTMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 274
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ ER + + GS++ + A+ P D ++P T +
Sbjct: 275 YQPTLAEEMGSLQERI-------TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKT 327
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
LD ++A FPA+N L S S +D V + K +LQK ELQ+I
Sbjct: 328 VLDRNIASLGIFPAVNPLDSTSRLLDP------SVVGIQHYQTARKVQMILQKFLELQDI 381
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ I+G D L E ++ + AR +R ++L Q F
Sbjct: 382 IAILGIDELSEEDKLTVSRARKIR-NFLSQPFF 413
>sp|O83417|FLII_TREPA FLAGELLUM-SPECIFIC ATP SYNTHASE >gi|7436100|pir||A71329 probable
flagellum-specific ATP synthase (fliI) - syphilis
spirochete >gi|3322685|gb|AAC65390.1| (AE001218)
flagellum-specific ATP synthase (fliI) [Treponema
pallidum]
Length = 447
Score = 105 bits (259), Expect = 3e-21
Identities = 85/269 (31%), Positives = 127/269 (46%), Gaps = 29/269 (10%)
Query: 676 LAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAARE 735
+A+ +DA V + GERG E+ D + G ++R+V+++ TS+ AR
Sbjct: 180 IARNTDADVSVIALIGERGREVMDFVAH-------DLGPEGLKRSVIVSATSDESPLARV 232
Query: 736 ASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAE 795
YT IAEYFRD G V L+ DS +R+A+A REI E+P GY + L +
Sbjct: 233 RGAYTATAIAEYFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPK 292
Query: 796 FYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRH 855
ERAG + +GSV+ V G D EP+ +V L LA+R H
Sbjct: 293 LLERAG-------SFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNH 345
Query: 856 FPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI----VGPD 911
+PAI+ L S S H+ + + K L +E++++VR+ G D
Sbjct: 346 YPAIDVLQSVSRLA-------HRVLGADMKEAVRIVRRALAVYAEVEDLVRVGAYQQGSD 398
Query: 912 ALPERERAILLVARMLREDYLQQDAFDEV 940
A E +RAI + A + E +L Q A + V
Sbjct: 399 A--ELDRAIAMRAEL--ERFLTQGAQERV 423
>gb|AAD15915.1| (AF069392) polar flagellum-specific ATP synthase FliI [Vibrio
parahaemolyticus]
Length = 439
Score = 105 bits (259), Expect = 3e-21
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 23/288 (7%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
+VT + + + AQVV+ GERG E+ + +EE G+ R+V++A ++
Sbjct: 173 SVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEI-------LGEDGRRRSVVVAAPADA 225
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
R T +TIAEYFRD G DV L+ DS +R+A+A REI+ + E P +GYP +
Sbjct: 226 SPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSV 285
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+KL ERAG GS + GS++ V G D +P+ + ++ L +
Sbjct: 286 FAKLPALVERAGN----GSPEQ-GSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
+A H+PAI+ S S + + H + KA+R + + + +K +L I
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMS---KAVR-QVLSICRKNQDLVSI-GAYK 395
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLL 957
P P + A L ++ ++YLQQ + V P + V M+R +L
Sbjct: 396 PGTDPAIDGAFTLKPKL--DEYLQQRMKESV----PYDMCVNMLRNIL 437
>sp|P12698|ATPB_BACME ATP SYNTHASE BETA CHAIN >gi|67849|pir||PWBSBM H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Bacillus megaterium
>gi|142561|gb|AAA82526.1| (M20255) ATP synthase beta
subunit [Bacillus megaterium]
Length = 472
Score = 104 bits (258), Expect = 4e-21
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 34/298 (11%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + ++ G GER E D+ E T ++++T ++
Sbjct: 171 LINNIAQEH-------GGISVFAGVGERTREGNDLYHEM-------TDSGVIKKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR+ TG+T+AEYFRD G DV D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + VGSV+ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L+ +PA++ L S S + + V E A+ + + LQ+ ELQ+I
Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSP------EIVGEEHYAIARQVQQTLQRYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDT-----YCPPEKQVTMMRVLL 957
+ I+G D L + ++ ++ AR + + +L Q + E T Y P ++ V + +L
Sbjct: 384 IAILGMDELSDEDKLVVPRARRV-QFFLSQTSVAEQFTGQKGSYVPVKETVKGFKEIL 440
>sp|P42469|ATPB_STIAU ATP SYNTHASE BETA CHAIN >gi|587526|emb|CAA54206.1| (X76879) ATPase
beta-subunit [Stigmatella aurantiaca]
Length = 481
Score = 104 bits (258), Expect = 4e-21
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 686 IYIGCGERGNEMTDVLEEFPK--LKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
++ G GER E D+ E + + P+T + + VL+ N P AR + +T
Sbjct: 186 VFAGVGERTREGNDLYHEMQEGNVSTPRTW--MESQCVLVYGQMNEPPGARARVALSALT 243
Query: 744 IAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
IAEYFRDM G+DV L D+ R+ +A E+S L +P GY L++++ ER
Sbjct: 244 IAEYFRDMEGHDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQERITS 303
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
GSV+ + A+ P D ++P T + L+ ++ +PA++ L
Sbjct: 304 TTK-------GSVTSVQAIYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPL 356
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S +D V PE A+ K +LQK ELQ+I+ I+G D L E ++ +
Sbjct: 357 DSTSRILDP------NVVGPEHYAVARKVQGILQKYKELQDIIAILGMDELSETDKLTVA 410
Query: 923 VARMLREDYLQQDAFDEVDTYCP 945
AR +++ Q EV T P
Sbjct: 411 RARKIQKFLSQPFHVAEVFTGAP 433
>pir||A83435 ATP synthase in type III secretion system PA1697 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9947670|gb|AAG05086.1|AE004596_12 (AE004596) ATP
synthase in type III secretion system [Pseudomonas
aeruginosa]
Length = 440
Score = 104 bits (256), Expect = 7e-21
Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL + V ++ V + GERG E+ + +E G+ + R
Sbjct: 173 GGGKSTLLASLVRN------AEVDVTVLALVGERGREVREFIES-------DLGEQGLRR 219
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
+VL+ TS+ P R + + +IAEYFRD G V L+ DS +R+A A REI E
Sbjct: 220 SVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREIGLAAGEP 279
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L ERAG+ GS++ + V G D SEPV T +
Sbjct: 280 PTRRGYPPSVFAALPRLMERAGQ-------SERGSITALYTVLVEGDDMSEPVADETRSI 332
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVD---PEWKAMRDKAMELLQ 896
+ L LA H+PAI+ L S S ++ + D ++ EW A ++ +ELL
Sbjct: 333 LDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEE-VELLL 391
Query: 897 KESELQEIVRIVGPDALPERERAI 920
K E Q+ G D+ E +RAI
Sbjct: 392 KIGEYQK-----GQDS--EADRAI 408
>sp|Q48333|ATPB_HALVO ATP SYNTHASE BETA CHAIN >gi|629403|pir||S45145 H+-transporting ATP
synthase (EC 3.6.1.34) chain B [validated] - Haloferax
volcanii >gi|496905|emb|CAA56052.1| (X79516) membrane
ATPase [Haloferax volcanii] >gi|1098058|prf||2115218E
ATPase:SUBUNIT=beta [Haloferax volcanii]
Length = 468
Score = 103 bits (255), Expect = 9e-21
Identities = 78/252 (30%), Positives = 124/252 (48%), Gaps = 17/252 (6%)
Query: 685 VIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITI 744
V++ G E + +E+F + TG +ER+V+ N ++ P R + +T
Sbjct: 182 VVFGAMGITQEEANEFMEDFER-----TGA--LERSVVFTNLADDPAVERTVTPRLALTT 234
Query: 745 AEYFR-DMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRV 803
AEY D Y V ++ + + EALREI EE+PG GYP Y+ + LA+ YERAGR+
Sbjct: 235 AEYLAFDKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRI 294
Query: 804 VTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLT 863
R GSV+ I ++ PG D + P+ T + + +D DL + P IN L
Sbjct: 295 -----QGRDGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIRPPINPLP 349
Query: 864 SYSLYVDAVKDWWHKNVDPEWKA-MRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S +D D + + E A + D+ + +L+++V IVG +AL ER+ L
Sbjct: 350 SLSRLMD---DGIGEGLTREDHADVSDQMYAAYAEGEDLRDLVNIVGREALSERDNKYLD 406
Query: 923 VARMLREDYLQQ 934
A +++ Q
Sbjct: 407 FAERFEAEFVNQ 418
>dbj|BAB07473.1| (AP001519) ATP synthase beta subunit [Bacillus halodurans]
Length = 470
Score = 103 bits (255), Expect = 9e-21
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + ++ G GER E D+ E + ++++T ++
Sbjct: 171 LINNIAQEH-------GGISVFAGVGERTREGNDLYHEM-------SDSGVIKKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +G+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALSGLTMAEYFRDKQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + +VGSV+ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L+ +PA++ L S S + + V E + + + LQK ELQ+I
Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSP------EIVGEEHYNVARQVQQTLQKYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L E ++ I+ AR ++
Sbjct: 384 IAILGMDELSEEDKLIVARARRIQ 407
>gb|AAB51413.1| (L76303) flagellar export apparatus [Borrelia burgdorferi]
Length = 436
Score = 103 bits (254), Expect = 1e-20
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 676 LAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAARE 735
+AK S+A V + GERG E+ + +E + G+ ++++VL+ +TS+ +R
Sbjct: 178 IAKNSNADVNVIAFIGERGRELNEFIEH-------ELGEERLKKSVLVVSTSDESPISRY 230
Query: 736 ASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAE 795
Y IAEYFR+ G DVA DS +R+A A RE+S L E P +GYP + ++
Sbjct: 231 KGAYVATMIAEYFREQGKDVAFCFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPI 290
Query: 796 FYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRH 855
ER+ G + GSV+ V G DF+EPV N V+ LD DL R
Sbjct: 291 LLERS------GFNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGI 344
Query: 856 FPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVR 906
+P+IN L+S S + H+ + E + + KA LL + ++++R
Sbjct: 345 YPSINVLSSTSRSI-------HRIMSLEKQKLIMKARNLLSIYKDYEDLIR 388
>gb|AAB86534.1| (AF010151) PscN [Pseudomonas aeruginosa]
Length = 440
Score = 103 bits (254), Expect = 1e-20
Identities = 79/247 (31%), Positives = 116/247 (45%), Gaps = 24/247 (9%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL + V ++ V + GERG E+ + +E G+ + R
Sbjct: 173 GGGKSTLLASLVRN------AEVDVTVLALVGERGREVREFIES-------DLGEQGLRR 219
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
+VL+ TS+ P R + + +IAEYFRD G V L+ DS +R+A A REI E
Sbjct: 220 SVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREIGLAAGEP 279
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L ERAG+ GS++ + V G D SEPV T +
Sbjct: 280 PTRRGYPPSVFAALPRLMERAGQ-------SERGSITALYTVLVEGDDMSEPVADETRSI 332
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVD---PEWKAMRDKAMELLQ 896
+ L LA H+PAI+ L S S ++ + D ++ EW A ++ +ELL
Sbjct: 333 LDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEE-VELLL 391
Query: 897 KESELQE 903
K E Q+
Sbjct: 392 KIGEYQK 398
>pir||C81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector beta chain
Cj0107 [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967601|emb|CAB72591.1| (AL139074) ATP
synthase F1 sector beta subunit [Campylobacter jejuni]
Length = 465
Score = 103 bits (254), Expect = 1e-20
Identities = 79/295 (26%), Positives = 135/295 (44%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++++ L
Sbjct: 165 LIHNVAFKH-------SGYSVFAGVGERTREGNDLYNEMKESN-------VLDKVALCYG 210
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD MG DV + D+ R++++ E+S L +P G
Sbjct: 211 QMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVG 270
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LAS++ +F ER + + GS++ + AV P D ++P +
Sbjct: 271 YQPTLASEMGKFQERI-------TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ +A + +PA++ L S S +D + E + +LQK +LQ+I
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDP------NIIGEEHYKVARGVQSVLQKYKDLQDI 377
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G D L E ++ ++ AR + E +L Q F P K +++ + F
Sbjct: 378 IAILGMDELSEEDKLVVERARKI-EKFLSQPFFVAEVFTGSPGKYISLEDTIAGF 431
>gb|AAF64075.1|AF147781_1 (AF147781) ATP synthase beta subunit [Bacillus thermoleovorans]
Length = 473
Score = 103 bits (254), Expect = 1e-20
Identities = 76/264 (28%), Positives = 125/264 (46%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++ +T ++
Sbjct: 171 LIHNIAQEH-------GGISVFAGVGERTREGNDLYHE---MKD----SGVISKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + GS++ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ LA +PA++ L S S + + V E + K + LQ+ ELQ+I
Sbjct: 330 NLERKLAEMGIYPAVDPLASTSRALAP------EIVGEEHYQVARKVQQTLQRYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L + ++ ++ AR ++
Sbjct: 384 IAILGMDELSDEDKLVVHRARRIQ 407
>sp|P22478|ATPB_BACFI ATP SYNTHASE BETA CHAIN >gi|80091|pir||S17726 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Bacillus firmus
(strain OF4) >gi|142551|gb|AAC08044.1| (M60117) ATP
synthase beta subunit [Bacillus firmus]
Length = 469
Score = 102 bits (253), Expect = 1e-20
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + + ++ G GER E D+ E T ++++T ++
Sbjct: 170 LINNIAQEHGV-------ISVFAGVGERTREGNDLYHEM-------TDSGVIKKTAMVFG 215
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +G+T+AE+FRD G DV L D+ R+ +A E+S L MP G
Sbjct: 216 QMNEPPGARMRVALSGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVG 275
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ ER + +VGSV+ I A+ P D+++P T +
Sbjct: 276 YQPTLATEMGHLQERI-------TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 328
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L+ +PA++ L S S + + V E ++ + + LQK ELQ+I
Sbjct: 329 NLERKLSEMGIYPAVDPLASTSRALSP------EIVGEEHYSVARQVQQTLQKYKELQDI 382
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L E ++ ++ AR ++
Sbjct: 383 IAILGMDELSEEDKLVVHRARRIQ 406
>pir||A71486 probable yop N (flagellar-type ATPase) - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3329120|gb|AAC68264.1|
(AE001337) Yops secretion ATPase [Chlamydia trachomatis]
Length = 442
Score = 102 bits (253), Expect = 1e-20
Identities = 76/231 (32%), Positives = 113/231 (48%), Gaps = 23/231 (9%)
Query: 677 AKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREA 736
A+ +D V+ IG ERG E+ + +E G+ M+R+V++ +TS+ R
Sbjct: 188 AEEADINVIALIG--ERGREVREFIEN-------DLGEEGMKRSVIVVSTSDQSSQLRLN 238
Query: 737 SIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEF 796
+ Y G IAEYFRD G V LM DS +R+A ALRE+ E P GY + S L +
Sbjct: 239 AAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKL 298
Query: 797 YERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHF 856
ERAG SD G+++ V G D +EPV ++ L LA+ H+
Sbjct: 299 LERAG-----ASD--KGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHY 351
Query: 857 PAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRI 907
PAI+ L S S + A+ V E + + +A E+L K + ++RI
Sbjct: 352 PAIDVLASISRLLTAI-------VPEEQRRIIGRAREVLAKYKANEMLIRI 395
>gb|AAC38612.1| (AF049488) BscN [Bordetella bronchiseptica]
Length = 444
Score = 102 bits (252), Expect = 2e-20
Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL L K + V + GERG E+ + LE + G +
Sbjct: 174 GGGKSTLLG------MLVKGAAVDVTVVALIGERGREVREFLEH-------ELGPEGRRK 220
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
+V++ TS+ R + Y IAEYFRD G V DS +R+A A REI +
Sbjct: 221 SVIVCATSDKSSMERAKAAYVATAIAEYFRDQGQRVLFRMDSVTRFARAQREIGLAAGDP 280
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L + ERAG T GS++ + V G D +EPV T +
Sbjct: 281 PTRRGYPPSVFATLPKLMERAGMNQT-------GSITALYTVLVEGDDMNEPVADETRSI 333
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
+ L L H+PA++ L S S ++AV V P K + + EL+ K
Sbjct: 334 LDGHIVLSRKLGAANHYPAVDVLASASRVMNAV-------VSPRHKYLAGRMRELMAKYQ 386
Query: 900 ELQEIVRI----VGPDA-LPERERAILLVARMLREDYLQQDAFDE 939
+++ +V+I G DA E + I + LR+ +++AF++
Sbjct: 387 DVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFED 431
>sp|P95789|ATPB_STRMU ATP SYNTHASE BETA CHAIN >gi|4239652|gb|AAD13383.1| (U31170) ATPase,
beta subunit [Streptococcus mutans]
Length = 468
Score = 102 bits (252), Expect = 2e-20
Identities = 87/315 (27%), Positives = 140/315 (43%), Gaps = 38/315 (12%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++E+T ++
Sbjct: 168 LIHNIAQEH-------GGISVFTGVGERTREGNDLYWEMKE-------SGVIEKTAMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 214 QMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GSV+ I A+ P D+++P +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E + + +LQ+ ELQ+I
Sbjct: 327 NLERRLTQMGIYPAVDPLASSSRALSP------EIVGQEHYDVATEVQHVLQRYRELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQVT-MMRVL 956
+ I+G D L + E+ LV R R + F+ + +Y P + V +L
Sbjct: 381 IAILGMDELSDEEKT--LVGRARRIQFFLSQNFNVAEQFTGQPGSYVPVAETVRGFKEIL 438
Query: 957 LNFYDKTMEAISRGV 971
YD+ E R V
Sbjct: 439 EGKYDELPEDAFRSV 453
>prf||1211283A ATPase beta F1 [thermophilic bacterium PS3]
Length = 473
Score = 101 bits (250), Expect = 3e-20
Identities = 75/264 (28%), Positives = 125/264 (46%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++ +T ++
Sbjct: 171 LIHNIAQEH-------GGISVFAGVGERTREGNDLYHE---MKD----SGVISKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAIG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + GS++ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ LA +PA++ L S S + + V E + K + L++ ELQ+I
Sbjct: 330 NLERKLAEMGIYPAVDPLVSTSRALAP------EIVGEEHYQVARKVQQTLERYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L + ++ ++ AR ++
Sbjct: 384 IAILGMDELSDEDKLVVHRARRIQ 407
>sp|P41009|ATPB_BACCA ATP SYNTHASE BETA CHAIN >gi|533290|dbj|BAA07248.1| (D38058) ATPase
subunit beta [Bacillus caldotenax]
Length = 473
Score = 101 bits (250), Expect = 3e-20
Identities = 75/264 (28%), Positives = 125/264 (46%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++ +T ++
Sbjct: 171 LIHNIAQEH-------GGISVFAGVGERTREGNDLYHE---MKD----SGVISKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + GS + I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTAKGSTTSIQAIYVPADDYTDPAPATTFSHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ ++A +PA++ L S S + + V E + K + LQ+ ELQ+I
Sbjct: 330 NLERNVAEMGIYPAVDPLASTSRALAP------EIVGEEHYQVARKVQQTLQRYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L + ++ ++ AR ++
Sbjct: 384 IAILGMDELSDEDKLVVHRARRIQ 407
>pir||T10475 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Peptococcus
niger (fragment) >gi|587507|emb|CAA54205.1| (X76878)
ATPase beta-subunit [Peptococcus niger]
Length = 427
Score = 101 bits (250), Expect = 3e-20
Identities = 75/253 (29%), Positives = 120/253 (46%), Gaps = 22/253 (8%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
++ G GER E D+L E + ++++T L+ N P AR TG+T+A
Sbjct: 186 VFAGVGERTREGKDLLVEMRE-------SGVIDKTSLVFGQMNEPPGARMRIALTGLTVA 238
Query: 746 EYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVV 804
EYFRD DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 239 EYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI---- 294
Query: 805 TLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTS 864
+ GS++ + AV P D ++P T + L+ ++ + +PA++ L S
Sbjct: 295 ---TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLAS 351
Query: 865 YSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVA 924
S +D + V E + E+LQ+ ELQ+I+ I+G D L + E+ + A
Sbjct: 352 TSRILDP------RIVGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEEKLTVARA 405
Query: 925 RMLREDYLQQDAF 937
R + E +L Q F
Sbjct: 406 RRI-ERFLSQSFF 417
>sp|P42467|ATPB_PEPNI ATP SYNTHASE BETA CHAIN
Length = 427
Score = 101 bits (250), Expect = 3e-20
Identities = 75/253 (29%), Positives = 120/253 (46%), Gaps = 22/253 (8%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
++ G GER E D+L E + ++++T L+ N P AR TG+T+A
Sbjct: 186 VFAGVGERTREGKDLLVEMRE-------SGVIDKTSLVFGQMNEPPGARMRIALTGLTVA 238
Query: 746 EYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVV 804
EYFRD DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 239 EYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI---- 294
Query: 805 TLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTS 864
+ GS++ + AV P D ++P T + L+ ++ + +PA++ L S
Sbjct: 295 ---TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLAS 351
Query: 865 YSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVA 924
S +D + V E + E+LQ+ ELQ+I+ I+G D L + E+ + A
Sbjct: 352 TSRILDP------RIVGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEEKLTVARA 405
Query: 925 RMLREDYLQQDAF 937
R + E +L Q F
Sbjct: 406 RRI-ERFLSQSFF 417
>sp|P12986|ATPB_VIBAL ATP SYNTHASE BETA CHAIN >gi|79235|pir||S06082 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Vibrio alginolyticus
>gi|48339|emb|CAA34181.1| (X16050) uncD (AA 1-467)
[Vibrio alginolyticus]
Length = 467
Score = 101 bits (249), Expect = 4e-20
Identities = 92/341 (26%), Positives = 144/341 (41%), Gaps = 33/341 (9%)
Query: 618 VGMEEIAENHLTHVLFDEIV-EIRYISEGQEVYDVTTETHN-----FIGG-------NMP 664
VG EE+ H + ++E EI + G +V D+ GG NM
Sbjct: 102 VGAEEVYSIHRSAPSYEEQSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMM 161
Query: 665 TLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIA 724
L++N QH + + ++ G GER E D E + KP + ++
Sbjct: 162 ELINNIALQH-------SGLSVFAGVGERTREGNDFYYEMQEAGVVNVEKPEESKVAMVY 214
Query: 725 NTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP G
Sbjct: 215 GQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVG 274
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 275 YQPTLAEEMGVLQERI-------TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATV 327
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ ++A +PAI+ L S S +D + V + + + LQ+ EL++I
Sbjct: 328 VLNRNIAAMGLYPAIDPLDSTSRMLDPLV------VGQDHYEVARGVQQTLQRYKELKDI 381
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCP 945
+ I+G D L E ++ ++ AR + Q EV T P
Sbjct: 382 IAILGMDELSEEDKQVVSRARKIERFLTQPYHVAEVFTGDP 422
>sp|Q50331|ATPB_MYCPN ATP SYNTHASE BETA CHAIN >gi|2127619|pir||S62849 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Mycoplasma
pneumoniae >gi|2146069|pir||S73570 ATP synthase beta
chain - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1209766|gb|AAC43659.1| (U43738) ATP synthase beta
chain [Mycoplasma pneumoniae] >gi|1673912|gb|AAB95892.1|
(AE000024) ATP synthase beta chain [Mycoplasma
pneumoniae]
Length = 475
Score = 101 bits (249), Expect = 4e-20
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 29/273 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + + ++ G GER E D+ E + ++++T L+
Sbjct: 169 LIHNIAKEH-------SGLSVFAGVGERTREGNDLYYEMIQ-------GGVIDKTALVFG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR T +T+AEYFRD DV L D+ R+ +A E+S L MP G
Sbjct: 215 QMNEPPGARMRVALTALTMAEYFRDHDNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 274
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER T GS++ + A+ P D ++P T +
Sbjct: 275 YQPTLATEMGQLQERIASTKT-------GSITSVQAIYVPADDLTDPAPATTFTHLDAKT 327
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
LD ++A FPAIN L S S +D V + +LQ+ +ELQ+I
Sbjct: 328 VLDRNIAALGIFPAINPLESTSRLLDP------NIVGINHYKVALGVQNILQRFAELQDI 381
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ I+G D L + ++ I+ AR +R ++L Q F
Sbjct: 382 IAILGIDELADEDKIIVERARRIR-NFLSQPFF 413
>pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1.-) beta chain
- Streptococcus mutans
Length = 469
Score = 101 bits (249), Expect = 4e-20
Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 28/267 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++E+T ++
Sbjct: 168 LIHNIAQEH-------GGISVFTGVGERTREGNDLYWEMKE-------SGVIEKTAMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP G
Sbjct: 214 QMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + + GSV+ I A+ P D+++P +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L + +PA++ L S S + + V E + + +LQ+ ELQ+I
Sbjct: 327 NLERRLTQMGIYPAVDPLASSSRALSP------EIVGQEHYDVATEVQHVLQRYRELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDY 931
+ I+G D L + E+ ++ AR +
Sbjct: 381 IAILGMDELSDEEKTLVGRARRFSSSF 407
>gi|11467760 CF1 beta subunit of ATP synthase [Nephroselmis olivacea]
>gi|5880689|gb|AAD54782.1|AF137379_5 (AF137379) CF1 beta
subunit of ATP synthase [Nephroselmis olivacea]
Length = 491
Score = 100 bits (247), Expect = 8e-20
Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + K + L+ N P AR T +T
Sbjct: 187 VSVFGGVGERTREGNDLYMEMCESKVINKADVKSSKVALVYGQMNEPPGARMRVGLTALT 246
Query: 744 IAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 247 MAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER--- 303
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+T D GS++ I AV P D ++P T + L +LA + +PA++ L
Sbjct: 304 -ITSTKD---GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPL 359
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + W D A R K + LQ+ ELQ+I+ I+G D L E +R I+
Sbjct: 360 DSTSTMLQP----WILGDDHYGTAQRVK--QTLQRYKELQDIIAILGLDELSEEDRMIVA 413
Query: 923 VARMLREDYLQQDAF-DEVDTYCP 945
AR + E +L Q F EV T P
Sbjct: 414 RARKI-ERFLSQPFFVAEVFTGAP 436
>sp|P42006|ATPB_BACST ATP SYNTHASE BETA CHAIN >gi|534854|dbj|BAA07255.1| (D38060) ATPase
subunit beta [Bacillus stearothermophilus]
Length = 473
Score = 100 bits (246), Expect = 1e-19
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++ +T ++
Sbjct: 171 LIHNIAQEH-------GGISVFAGFGERTREGNDLYHE---MKD----SGVISKTGMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P R TG+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGPRMRVALTGLTMAEYFRDEQGQDVLLFIDNNFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + GS++ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ LA +PA++ L S S + + V E + K + LQ+ ELQ+I
Sbjct: 330 NLERKLAEMGIYPAVDPLASTSRALAP------EIVGEEHYQVARKVQQTLQRYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L + ++ ++ AR ++
Sbjct: 384 IAILGMDELSDEDKLVVHRARRIQ 407
>sp|P25075|ATPX_BACFI ATP SYNTHASE BETA CHAIN >gi|67850|pir||PWBSBF H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Bacillus firmus
(strain RAB)
Length = 467
Score = 99.8 bits (245), Expect = 1e-19
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 29/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + + ++ G GER E D+ E T +++++ ++
Sbjct: 169 LINNIAQEHGV-------ISVFAGVGERTREGNDLYHEM-------TDSGVIKKSAMVFG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR A +G+T+AE+FRD G DV L D+ S + +A E+S L MP G
Sbjct: 215 QMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVDNIS-FTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + +VGSV+ I A+ P D+++P T +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L+ +PA++ L S S + + V E ++ + + LQK ELQ+I
Sbjct: 327 NLERKLSEMGIYPAVDPLASTSRALSP------EIVGEEHYSVARQVQQTLQKYKELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L E ++ ++ AR ++
Sbjct: 381 IAILGMDELSEEDKLVVHRARRIQ 404
>gi|11467696 ATP synthase CF1 subunit b [Guillardia theta]
>gi|5915725|sp|O78491|ATPB_GUITH ATP SYNTHASE BETA CHAIN
>gi|3603021|gb|AAC35682.1| (AF041468) ATP synthase CF1
subunit b [Guillardia theta]
Length = 475
Score = 99.8 bits (245), Expect = 1e-19
Identities = 83/277 (29%), Positives = 125/277 (44%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + K + L+ N P AR T +T
Sbjct: 179 VSVFGGVGERTREGNDLYMEMKESKVINESNLGESKVALVYGQMNEPPGARMRVGLTALT 238
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 239 MAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQER--- 295
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+T ++ GS++ I AV P D ++P T + L +LA + +PA++ L
Sbjct: 296 -ITSTTE---GSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRNLAAKGIYPAVDPL 351
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + V E + E LQ+ ELQ+I+ I+G D L E +R I+
Sbjct: 352 DSTSTMLQI------NIVGQEHYSCAQNVKETLQRYKELQDIIAILGLDELSEEDRQIVA 405
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V++ + F
Sbjct: 406 RARKI-ERFLSQPFFVAEVFTGSPGKYVSLADTMKGF 441
>pir||B82114 flagellum-specific ATP synthase FliI VC2130 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656681|gb|AAF95275.1| (AE004286) flagellum-specific
ATP synthase FliI [Vibrio cholerae]
Length = 439
Score = 99.8 bits (245), Expect = 1e-19
Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 23/289 (7%)
Query: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNM 729
+VT + + + AQVV+ GERG E+ + +EE G +R+V++A ++
Sbjct: 173 SVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEI-------LGVDGRQRSVVVAAPADS 225
Query: 730 PVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYL 789
R T +TIAEYFRD G DV L+ DS +R+A+A REI+ + E P +GYP +
Sbjct: 226 SPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSV 285
Query: 790 ASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDAD 849
+KL ERAG G ++ GS++ V G D +P+ + ++ L +
Sbjct: 286 FAKLPALVERAGN----GGPHQ-GSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340
Query: 850 LARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVG 909
+A H+PAI+ S S + + H + KA+R + + + +K +L I
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTDEHLLMS---KAVR-QILSVCRKNQDLVSI-GAYK 395
Query: 910 PDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLN 958
P + A L ++ + YLQQ + V P + V M+R +L+
Sbjct: 396 PGTDKAIDAAFTLKPKL--DQYLQQAMKETV----PYDMCVNMLRHVLS 438
>pir||F82036 ATP synthase F1, beta chain VC2764 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657365|gb|AAF95903.1|
(AE004342) ATP synthase F1, beta subunit [Vibrio
cholerae]
Length = 467
Score = 99.8 bits (245), Expect = 1e-19
Identities = 79/284 (27%), Positives = 124/284 (42%), Gaps = 20/284 (7%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L++N QH + + ++ G GER E D E + +P + +
Sbjct: 159 NMMELINNIALQH-------SGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVA 211
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
++ N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP
Sbjct: 212 MVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 271
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 272 AVGYQPTLAEEMGVLQERI-------TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLD 324
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L+ ++A +PAI+ L S S +D + V E + LQ+ EL
Sbjct: 325 ATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLV------VGQEHYDVARGVQATLQRYKEL 378
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCP 945
++I+ I+G D L E ++ ++ AR + Q EV T P
Sbjct: 379 KDIIAILGMDELSEADKQVVARARKIERFLTQPYHVAEVFTGDP 422
>gi|11467034 ATP Synthase, beta subunit [Euglena gracilis]
>gi|399080|sp|P31476|ATPB_EUGGR ATP SYNTHASE BETA CHAIN
>gi|418792|pir||S34547 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Euglena gracilis chloroplast
>gi|415784|emb|CAA50128.1| (X70810) ATP Synthase, beta
subunit [Euglena gracilis]
Length = 480
Score = 99.5 bits (244), Expect = 2e-19
Identities = 83/277 (29%), Positives = 125/277 (44%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ +E + + LI N P AR T +T
Sbjct: 185 VSVFGGVGERTREGNDLYQEMKESGVINDRNFKESKVALIYGQMNEPPGARMRVGLTALT 244
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 245 MAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 302
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ +VGS++ I AV P D ++P T + L +LA + +PA++ L
Sbjct: 303 -----TSTKVGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPL 357
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S ++ W V E + LQ+ ELQ+I+ I+G D L E +R ++
Sbjct: 358 DSTS---TMLQPW---IVGEEHYNTAQSVKKTLQRYKELQDIIAILGLDELSEEDRLVVS 411
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K VT+ + F
Sbjct: 412 RARKV-ERFLSQPFFVAEVFTGSPGKYVTLAETIEGF 447
>gi|10955560 ATPase YscN [Yersinia enterocolitica]
>gi|732261|sp|P40290|YSCN_YEREN PROBABLE ATP SYNTHASE
YSCN (YOPS SECRETION ATPASE) >gi|1073735|pir||A55520
yscN protein - Yersinia enterocolitica
>gi|4324347|gb|AAD16824.1| (AF102990) ATPase YscN
[Yersinia enterocolitica]
Length = 439
Score = 99.5 bits (244), Expect = 2e-19
Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 27/248 (10%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL + L + ++ V + GERG E+ + +E G+ + +
Sbjct: 172 GGGKSTLLAS------LIRSAEVDVTVLALIGERGREVREFIES-------DLGEEGLRK 218
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
VL+ TS+ P R + + +IAEYFRD G V L+ DS +R+A A REI E
Sbjct: 219 AVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEP 278
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L ERAG+ GS++ + V G D +EPV T +
Sbjct: 279 PTRRGYPPSVFAALPRLMERAGQ-------SSKGSITALYTVLVEGDDMTEPVADETRSI 331
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
+ L LA H+PAI+ L S S ++ + V E K LL K
Sbjct: 332 LDGHIILSRKLAAANHYPAIDVLRSASRVMNQI-------VSKEHKTWAGDLRRLLAKYE 384
Query: 900 ELQEIVRI 907
E++ +++I
Sbjct: 385 EVELLLQI 392
>pir||B64244 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Mycoplasma
genitalium
Length = 382
Score = 99.5 bits (244), Expect = 2e-19
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 29/273 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + + ++ G GER E D+ E + ++++TVL+
Sbjct: 76 LIHNIAKEH-------SGLSVFAGVGERTREGNDLYYEMIQ-------GGVIDKTVLVFG 121
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR T +T+AEYFRD +V L D+ R+ +A E+S L MP G
Sbjct: 122 QMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 181
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ + ER T GS++ + A+ P D ++P T +
Sbjct: 182 YQPTLAIEMGKLQERIASTKT-------GSITSVQAIYVPADDLTDPAPATTFTHLDAKT 234
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
LD ++A FPAIN L S S +D V + +LQ+ +ELQ+I
Sbjct: 235 VLDRNIAALGIFPAINPLESTSRLLDP------SVVGINHYKVALGVQNILQRFAELQDI 288
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ I+G D L + ++ I+ AR +R ++L Q F
Sbjct: 289 IAILGIDELSDEDKIIVERARRIR-NFLSQPFF 320
>sp|P47639|ATPB_MYCGE ATP SYNTHASE BETA CHAIN >gi|3844991|gb|AAC71627.1| (U39722) ATP
synthase F1, subunit beta (atpD) [Mycoplasma genitalium]
Length = 476
Score = 99.5 bits (244), Expect = 2e-19
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 29/273 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + + ++ G GER E D+ E + ++++TVL+
Sbjct: 170 LIHNIAKEH-------SGLSVFAGVGERTREGNDLYYEMIQ-------GGVIDKTVLVFG 215
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR T +T+AEYFRD +V L D+ R+ +A E+S L MP G
Sbjct: 216 QMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 275
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ + ER T GS++ + A+ P D ++P T +
Sbjct: 276 YQPTLAIEMGKLQERIASTKT-------GSITSVQAIYVPADDLTDPAPATTFTHLDAKT 328
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
LD ++A FPAIN L S S +D V + +LQ+ +ELQ+I
Sbjct: 329 VLDRNIAALGIFPAINPLESTSRLLDP------SVVGINHYKVALGVQNILQRFAELQDI 382
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ I+G D L + ++ I+ AR +R ++L Q F
Sbjct: 383 IAILGIDELSDEDKIIVERARRIR-NFLSQPFF 414
>gi|10955631 Yops secretion ATPase YscN homolog [Yersinia pestis]
>gi|10955791|ref|NP_047598.1| Yops secretion protein
[Yersinia pestis] >gi|11266663|pir||T43585 yopS
secretion protein - Yersinia pestis plasmid pCD1
>gi|2996241|gb|AAC62564.1| (AF053946) Yops secretion
ATPase YscN homolog [Yersinia pestis]
>gi|3822071|gb|AAC69791.1| (AF074612) Yops secretion
protein [Yersinia pestis] >gi|5832460|emb|CAB54917.1|
(AL117189) putative Yops secretion ATP synthase
[Yersinia pestis]
Length = 439
Score = 99.5 bits (244), Expect = 2e-19
Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 27/248 (10%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL + L + ++ V + GERG E+ + +E G+ + +
Sbjct: 172 GGGKSTLLAS------LIRSAEVDVTVLALIGERGREVREFIES-------DLGEEGLRK 218
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
VL+ TS+ P R + + +IAEYFRD G V L+ DS +R+A A REI E
Sbjct: 219 AVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEP 278
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L ERAG+ GS++ + V G D +EPV T +
Sbjct: 279 PTRRGYPPSVFAALPRLMERAGQ-------SSKGSITALYTVLVEGDDMTEPVADETRSI 331
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
+ L LA H+PAI+ L S S ++ + V E K LL K
Sbjct: 332 LDGHIILSRKLAAANHYPAIDVLRSASRVMNQI-------VSKEHKTWAGDLRRLLAKYE 384
Query: 900 ELQEIVRI 907
E++ +++I
Sbjct: 385 EVELLLQI 392
>sp|P07677|ATPB_BACP3 ATP SYNTHASE BETA CHAIN >gi|77453|pir||A25504 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - thermophilic
bacterium PS-3 >gi|2981977|pdb|1SKY|E Chain E, Crystal
Structure Of The Nucleotide Free Alpha3beta3 Sub-Complex
Of F1-Atpase From The Thermophilic Bacillus Ps3
>gi|45804|emb|CAA28277.1| (X04609) beta subunit (AA
1-473) [thermophilic bacterium PS3]
>gi|45817|emb|CAA30655.1| (X07804) TF1-beta subunit (AA
1 - 473) [thermophilic bacterium PS3]
>gi|217147|dbj|BAA00066.1| (D00113) thermophilic proton
ATPase beta subunit [thermophilic bacterium PS3]
Length = 473
Score = 99.1 bits (243), Expect = 2e-19
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E +KD ++ +T ++
Sbjct: 171 LIHNIAQEH-------GGISVFAGVGERTREGNDLYHE---MKD----SGVISKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD G D L D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALTGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALLGRMPSAIG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + GS++ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ LA +PA++ L S S + + V E + K + L++ ELQ+I
Sbjct: 330 NLERKLAEMGIYPAVDPLVSTSRALAP------EIVGEEHYQVARKVQQTLERYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L + ++ ++ AR ++
Sbjct: 384 IAILGMDELSDEDKLVVHRARRIQ 407
>sp|Q03235|ATPB_PECFR ATP SYNTHASE BETA CHAIN >gi|421322|pir||S30598 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Pectinatus
frisingensis >gi|581446|emb|CAA45841.1| (X64543) ATPase
(beta-subunit) [Pectinatus frisingensis]
Length = 470
Score = 98.7 bits (242), Expect = 3e-19
Identities = 82/295 (27%), Positives = 130/295 (43%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN TQH ++ G GER E D+ E T ++ +T L+
Sbjct: 168 LIHNIATQH-------GGYSVFSGVGERTREGNDLWSEM-------TESGVINKTALVYG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRDMGY-DVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AEYFRD+ + DV L D+ R+ +A E+S L MP G
Sbjct: 214 QMNEPPGARMRVALTGLTMAEYFRDVQHQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y L + + ER + + GS++ + AV P D ++P T +
Sbjct: 274 YQPTLTTDVGALQERI-------TSTKKGSITSVQAVYVPADDLTDPGPAATFTHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L +A +PA++ L S S +D H + ++ R +LQK ELQ+I
Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDP-----HVIGEDHYEVARG-VQAVLQKYKELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G + L + ++ + AR ++ +L Q F P K V + + F
Sbjct: 381 IAILGMEELSDADKLTVARARKIQR-FLSQPFFVAEQFTGSPGKYVPLKETIRGF 434
>sp|P37809|ATPB_BACSU ATP SYNTHASE BETA CHAIN (VEGETATIVE PROTEIN 31) (VEG31)
>gi|2118188|pir||I40368 H+-transporting ATP synthase (EC
3.6.1.34) beta chain (atpD) - Bacillus subtilis
>gi|433991|emb|CAA82260.1| (Z28592) ATP synthase subunit
beta [Bacillus subtilis] >gi|2636206|emb|CAB15698.1|
(Z99122) ATP synthase (subunit beta) [Bacillus subtilis]
Length = 473
Score = 98.7 bits (242), Expect = 3e-19
Identities = 84/321 (26%), Positives = 145/321 (45%), Gaps = 35/321 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + ++ G GER E D+ E + ++ +T ++
Sbjct: 171 LINNIAQEH-------GGISVFAGVGERTREGNDLFYEM-------SDSGVINKTAMVFG 216
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR TG+T+AE+FRD+ G DV D+ R+ +A E+S L MP G
Sbjct: 217 QMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVG 276
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + VGSV+ I A+ P D+++P T +
Sbjct: 277 YQPTLATEMGQLQERI-------TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L +PA++ L S S + + V E A+ + LQ+ ELQ+I
Sbjct: 330 NLERKLTEMGIYPAVDPLASTSRALAP------EIVGEEHYAVAREVQSTLQRYKELQDI 383
Query: 905 VRIVGPDALPERERAILLVARML-----REDYLQQDAFDEVDTYCPPEKQVT-MMRVLLN 958
+ I+G D L E ++ ++ AR + + ++ + + +Y P ++ V +L
Sbjct: 384 IAILGMDELGEEDKLVVHRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVQGFKEILAG 443
Query: 959 FYDKTMEAISRGV-PLEEIAK 978
YD E R V +EE+ +
Sbjct: 444 KYDHLPEDAFRLVGRIEEVVE 464
>gi|6322581 F(1)F(0)-ATPase complex beta subunit, mitochondrial; Atp2p
[Saccharomyces cerevisiae] >gi|2144519|pir||PWBYB
H+-transporting ATP synthase (EC 3.6.1.34) beta chain
precursor - yeast (Saccharomyces cerevisiae)
>gi|1015845|emb|CAA89652.1| (Z49621) ORF YJR121w
[Saccharomyces cerevisiae] >gi|1483632|gb|AAC49475.1|
(U46215) F1-ATPase beta-subunit [Saccharomyces
cerevisiae]
Length = 511
Score = 98.7 bits (242), Expect = 3e-19
Identities = 81/264 (30%), Positives = 119/264 (44%), Gaps = 22/264 (8%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLME---RTVLIANTSNMPVAAREASIYTGI 742
++ G GER E D+ E + TG +E + L+ N P AR TG+
Sbjct: 216 VFTGVGERTREGNDLYREMKE-----TGVINLEGESKVALVFGQMNEPPGARARVALTGL 270
Query: 743 TIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAG 801
TIAEYFRD G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 271 TIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI- 329
Query: 802 RVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINW 861
+ + GSV+ + AV P D ++P T + L ++ +PA++
Sbjct: 330 ------TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 383
Query: 862 LTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAIL 921
L S S +DA V E + K E LQ LQ+I+ I+G D L E+++ +
Sbjct: 384 LDSKSRLLDAAV------VGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTV 437
Query: 922 LVARMLREDYLQQDAFDEVDTYCP 945
AR ++ Q A EV T P
Sbjct: 438 ERARKIQRFLSQPFAVAEVFTGIP 461
>dbj|BAA23688.1| (AB006151) proton-translocating ATPase, beta subunit [Ruminococcus
albus]
Length = 479
Score = 98.7 bits (242), Expect = 3e-19
Identities = 104/409 (25%), Positives = 169/409 (40%), Gaps = 57/409 (13%)
Query: 538 IGDKVYYRVVISGESNLEKLGIERVGRGYT-SYDIVPVEVEELYNALGRPYAELKRAGIE 596
IGD V + +S L + G++ V G S + + ++N LG P L
Sbjct: 50 IGDDVVRCIAMSSTDGLVR-GVDAVDTGRAISVPVGRETLSRMFNLLGDPVDNLPAPETA 108
Query: 597 IHNYLSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETH 656
+ E SYE E+ A N + I I +G ++
Sbjct: 109 ERWEIHREPPSYE-----------EQTAANEILETGIKVIDLIAPYLKGGKI-------- 149
Query: 657 NFIGGN-------MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKD 709
GG + L++N QH + ++ G GER E D+ E +
Sbjct: 150 GLFGGAGVGKTVLIQELINNVANQH-------GGISVFTGVGERTREGNDLYWEMKE--- 199
Query: 710 PKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEA 768
++++TVL+ N P AR +G+T+AEYFRD+ G DV L D+ R+ +A
Sbjct: 200 ----SGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQA 255
Query: 769 LREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDF 828
E+S L MP GY LA+++ ER + GS++ + AV P D
Sbjct: 256 GSEVSALLGRMPSAVGYQPTLATEMGALQERI-------TSTNKGSITSVQAVYVPADDL 308
Query: 829 SEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMR 888
++P T + L +A FPA++ L S S + + V E +
Sbjct: 309 TDPAPATTFAHLDATTVLSRSIASLGIFPAVDPLESTSRILTP------EIVGNEHYQVA 362
Query: 889 DKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ +LQ+ ELQ+I+ I+G D L + ++ + AR ++ +L Q F
Sbjct: 363 RQVQSILQRYVELQDIIAIMGMDELSDEDKLTVSRARKIQR-FLSQPFF 410
>sp|Q57669|ATPB_METJA ATP SYNTHASE BETA CHAIN >gi|2118192|pir||A64327 H+-transporting ATP
synthase (EC 3.6.1.34) B chain - Methanococcus
jannaschii >gi|1590954|gb|AAB98199.1| (U67477)
H+-transporting ATP synthase, subunit B (atpB)
[Methanococcus jannaschii]
Length = 465
Score = 97.9 bits (240), Expect = 5e-19
Identities = 82/286 (28%), Positives = 138/286 (47%), Gaps = 29/286 (10%)
Query: 658 FIGGNMPTLLHNTVTQHQLAKWSDAQ------VVIYIGCGERGNEMTDVLEEFPKLKDPK 711
F G +P HN + Q+A+ + + V++ G E +EEF K
Sbjct: 155 FSGSGLP---HNQLAA-QIARQAKVRGEGEKFAVVFAAMGITSEEANFFMEEFRK----- 205
Query: 712 TGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYF---RDMGYDVALMADSTSRWAEA 768
TG +ER V+ N ++ P R + +T+AEY +DM + + ++ D T+ + EA
Sbjct: 206 TGA--LERAVVFINLADDPAIERILTPRIALTVAEYLAYEKDM-HVLVILTDMTN-YCEA 261
Query: 769 LREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDF 828
LREIS E+PG GYP Y+ + LA YERAGRV R G+++ I ++ P D
Sbjct: 262 LREISAARNEVPGRRGYPGYMYTDLATIYERAGRV-----KGRTGTITQIPILTMPDDDI 316
Query: 829 SEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMR 888
+ P+ T + + L +L R+ +P ++ L S S A + K +
Sbjct: 317 THPIPDLTGYITEGQIVLSRELHRKGIYPPVDVLPSLSRL--AGNGQGPGKTREDHKKVV 374
Query: 889 DKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQ 934
++A + L+++V +VG +AL +R+RA L A + +++Q
Sbjct: 375 NQAYAAYAEGRSLRDLVAVVGEEALTDRDRAYLKFADEFEDKFVRQ 420
>gb|AAB61298.1| (AF004014) F1F0-ATPase beta subunit [Helicobacter pylori]
Length = 469
Score = 97.9 bits (240), Expect = 5e-19
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H ++ G GER E D+ E K G ++++ L
Sbjct: 168 LIHNVAYKHN-------GYSVFAGVGERTREGNDLYFEM------KEGG-VLDKVALCYG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +TG+T+AEYFRD G DV + D+ R+A++ E+S L +P G
Sbjct: 214 QMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ + ER + + GS++ + AV P D ++P + +
Sbjct: 274 YQPTLAGEMGKLQERI-------ASTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ +A + +PA++ L S S + + + + + ++LQK +LQ+I
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSP------QMIGEKHYEIATGIQQVLQKYKDLQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G D L E ++ + AR + E +L Q F P K VT+ L F
Sbjct: 381 IAILGLDELSEEDKKTVERARKI-EKFLSQPFFVAEVFTGSPGKYVTLQETLEGF 434
>sp|P55988|ATPB_HELPY ATP SYNTHASE BETA CHAIN >gi|7436090|pir||D64661 ATP synthase F1,
subunit beta - Helicobacter pylori (strain 26695)
>gi|2314283|gb|AAD08174.1| (AE000619) ATP synthase F1,
subunit beta (atpD) [Helicobacter pylori 26695]
Length = 469
Score = 97.9 bits (240), Expect = 5e-19
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H ++ G GER E D+ E K G ++++ L
Sbjct: 168 LIHNVAYKHN-------GYSVFAGVGERTREGNDLYFEM------KEGG-VLDKVALCYG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +TG+T+AEYFRD G DV + D+ R+A++ E+S L +P G
Sbjct: 214 QMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ + ER + + GS++ + AV P D ++P + +
Sbjct: 274 YQPTLAGEMGKLQERI-------ASTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ +A + +PA++ L S S + + + + + ++LQK +LQ+I
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSP------QMIGEKHYEVATGIQQVLQKYKDLQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G D L E ++ + AR + E +L Q F P K VT+ L F
Sbjct: 381 IAILGLDELSEEDKKTVERARKI-EKFLSQPFFVAEVFTGSPGKYVTLQETLEGF 434
>sp|Q9ZK81|ATPB_HELPJ ATP SYNTHASE BETA CHAIN >gi|7436085|pir||D71855 ATP synthase F1,
chain beta - Helicobacter pylori (strain J99)
>gi|4155651|gb|AAD06639.1| (AE001533) ATP synthase F1,
subunit beta [Helicobacter pylori J99]
Length = 469
Score = 97.9 bits (240), Expect = 5e-19
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 29/295 (9%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H ++ G GER E D+ E K G ++++ L
Sbjct: 168 LIHNVAYKHN-------GYSVFAGVGERTREGNDLYFEM------KEGG-VLDKVALCYG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +TG+T+AEYFRD G DV + D+ R+A++ E+S L +P G
Sbjct: 214 QMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRIPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA ++ + ER + + GS++ + AV P D ++P + +
Sbjct: 274 YQPTLAGEMGKLQERI-------ASTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ +A + +PA++ L S S + + + + + ++LQK +LQ+I
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSP------QMIGEKHYEIATGIQQVLQKYKDLQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
+ I+G D L E ++ + AR + E +L Q F P K VT+ L F
Sbjct: 381 IAILGLDELSEEDKKTVERARKI-EKFLSQPFFVAEVFTGSPGKYVTLQETLEGF 434
>gb|AAF49540.1| (AE003528) CG5389 gene product [Drosophila melanogaster]
Length = 604
Score = 97.9 bits (240), Expect = 5e-19
Identities = 82/279 (29%), Positives = 122/279 (43%), Gaps = 20/279 (7%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
+++G GER E D+ E + K + VL+ N P AR + TG+TIA
Sbjct: 258 VFVGAGERTREGNDLYHEMIESKVISLEDD-SSKVVLVFGQMNEPPGARSRVVLTGLTIA 316
Query: 746 EYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVV 804
EYFRD+ G DV L D+ R+ +A E+S L +P GY L + + ER
Sbjct: 317 EYFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI---- 372
Query: 805 TLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTS 864
+ R GS++ + AV P D S+P T + L +A +PA++ L S
Sbjct: 373 ---TSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDS 429
Query: 865 YSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVA 924
S +D V E + + LQ LQ+I+ I+G D L E ++ + A
Sbjct: 430 SSRILDP------DVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARA 483
Query: 925 RMLREDYLQQDAFDEVDT-----YCPPEKQVTMMRVLLN 958
R ++ Q E+ T P EK V + LLN
Sbjct: 484 RKMQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLN 522
>sp|P30399|ATPB_CUSRE ATP SYNTHASE BETA CHAIN >gi|82303|pir||S20476 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - southern Asian
dodder chloroplast >gi|58333|emb|CAA43866.1| (X61698)
H(+)-transporting ATP synthase [Cuscuta reflexa]
Length = 490
Score = 97.5 bits (239), Expect = 7e-19
Identities = 79/277 (28%), Positives = 122/277 (43%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + + L+ N P AR T +T
Sbjct: 194 VSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALT 253
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY L++++ ER
Sbjct: 254 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 311
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ + GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 312 -----TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 366
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S+ + + V E K + LQ+ ELQ+I+ I+G D L E +R +
Sbjct: 367 DSTSMMLQP------RLVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 420
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V + ++ F
Sbjct: 421 RARKI-ERFLSQPFFVAEVFTGSPGKYVGLAETIIGF 456
>dbj|BAA12667.1| (D84449) proton ATPase beta subunit [Desulfovibrio vulgaris]
>gi|5811568|dbj|BAA83613.1| (AB022018) F1F0-ATPase beta
subunit [Desulfovibrio vulgaris]
Length = 471
Score = 97.5 bits (239), Expect = 7e-19
Identities = 80/279 (28%), Positives = 122/279 (43%), Gaps = 30/279 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
+++N QH + ++ G GER E D+ E +KD ++E+ LI
Sbjct: 169 MINNIAKQH-------GAISVFAGVGERTREGNDLYHE---MKDAG----VLEKAALIYG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR T + AEYFRD+ DV L D+ R+ +A E+S L MP G
Sbjct: 215 QMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVG 274
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y L + L ER V GS++ + AV P D ++P T +
Sbjct: 275 YQPTLGTDLGGLQERITSTVK-------GSITSVQAVYVPADDLTDPAPATTFSHLDGTL 327
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L +A +PA++ L S S +D V PE ++ ++LQK +LQ+I
Sbjct: 328 VLSRQIAELGIYPAVDPLDSTSRILDP------NVVGPEHYSVARAVQQVLQKYKDLQDI 381
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTY 943
+ I+G D L + ++ L VAR R F +T+
Sbjct: 382 IAILGMDELSDEDK--LTVARARRIQRFLSQPFHVAETF 418
>gb|AAB51731.1| (U93823) ATP synthase beta chain [Tmesipteris tannensis]
Length = 443
Score = 97.5 bits (239), Expect = 7e-19
Identities = 82/277 (29%), Positives = 122/277 (43%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + K + L+ N P AR T +T
Sbjct: 163 VSVFGGVGERTREGNDLYTEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALT 222
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
IAEYFRD+ DV L D+ R+ +A E+S L MP GY L++++ ER
Sbjct: 223 IAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 280
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ R GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 281 -----TSTREGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 335
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S ++ W V E + LQ+ ELQ+I+ I+G D L E +R +
Sbjct: 336 DSTS---TMLQPW---IVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEEDRLTVA 389
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V++ + F
Sbjct: 390 RARKI-ERFLSQPFFVAEVFTGSPGKYVSLAETIKGF 425
>gb|AAD50871.1| (AF168929) ATP synthase beta subunit [Mayaca aubletii]
Length = 496
Score = 97.5 bits (239), Expect = 7e-19
Identities = 79/277 (28%), Positives = 122/277 (43%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + + L+ N P AR T +T
Sbjct: 196 VSVFGGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALT 255
Query: 744 IAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ G DV L D+ R+ +A E+S L MP GY L++++ ER
Sbjct: 256 MAEYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 313
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ + GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 314 -----TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 368
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + + V E + + + LQ+ ELQ+I+ I+G D L E +R +
Sbjct: 369 DSTSTMLQP------RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 422
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V + + F
Sbjct: 423 RARKI-ERFLSQPFFVAEVFTGSPGKYVGLAETIRGF 458
>emb|CAB89960.1| (AJ235571) ATP synthase beta subunit [Prostanthera ovalifolia]
Length = 492
Score = 97.5 bits (239), Expect = 7e-19
Identities = 79/277 (28%), Positives = 122/277 (43%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + G + L+ N P AR T +T
Sbjct: 195 VSVFGGVGERTREGNDLYMEMKESGVINEGNIAESKVALVYGQMNEPPGARMRVGLTALT 254
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY L++++ ER
Sbjct: 255 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 312
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ + GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 313 -----TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 367
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + + V E + + + LQ+ ELQ+I+ I+G D L E +R +
Sbjct: 368 DSTSTMLQP------RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVA 421
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V + + F
Sbjct: 422 RARKI-ERFLSQPFFVAEVFTGSPGKYVGLAETIRGF 457
>sp|Q05373|ATPB_SYNP1 ATP SYNTHASE BETA CHAIN >gi|480499|pir||S36972 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Synechococcus sp.
(PCC 6716) >gi|49227|emb|CAA49882.1| (X70432) ATP
synthase (beta) [Synechococcus sp.]
Length = 482
Score = 97.1 bits (238), Expect = 9e-19
Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 26/300 (8%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L++N TQH V ++ G GER E D+ E + P + L
Sbjct: 172 MMELINNIATQH-------GGVSVFAGVGERTREGNDLYNEMIESGVIDKDDPSKSKIAL 224
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR +G+T+AEYFRD+ DV L D+ R+ +A E+S L MP
Sbjct: 225 VYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPS 284
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY L + + ER + GS++ I AV P D ++P T +
Sbjct: 285 AVGYQPTLGTDVGALQERITSTME-------GSITSIQAVYVPADDLTDPAPATTFAHLD 337
Query: 842 VFWALDADLARRRHFPAINWL--TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
L LA + +PA++ L TS L D V ++ LQ+
Sbjct: 338 GTTVLSRGLAAKGIYPAVDPLGSTSNMLQPDIVGSEHYQTARA--------VQATLQRYK 389
Query: 900 ELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
ELQ+I+ I+G D L E +R + AR + E +L Q F P K VT+ + F
Sbjct: 390 ELQDIIAILGLDELSEEDRLTVARARKV-ERFLSQPFFVAEVFTGAPGKYVTLEETIKGF 448
>prf||1508208B ATPase beta [Enterobacter aerogenes]
Length = 460
Score = 97.1 bits (238), Expect = 9e-19
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E T ++++
Sbjct: 159 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHEM-------TDSNVLDKVS 204
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP
Sbjct: 205 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 264
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 265 AVGYQPTLAEEMGVLQERI-------TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 317
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PA++ L S S +D + V E LLQ+ EL
Sbjct: 318 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPLV------VGQEHYDTARGVQSLLQRYQEL 371
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++I+ I+G D L E ++ ++ AR ++ +L Q F P K V++ + F
Sbjct: 372 KDIIAILGMDELSEEDKLVVARARKIQR-FLSQPFFVAEVFTGSPGKYVSLKDTIRGF 428
>gi|11467561 ATP synthase CF1 subunit beta [Odontella sinensis]
>gi|1352032|sp|P49647|ATPB_ODOSI ATP SYNTHASE BETA CHAIN
>gi|421741|pir||S33353 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Odontella sinensis
>gi|7436087|pir||S78366 H+-transporting ATP synthase (EC
3.6.1.34) beta chain - Odontella sinensis chloroplast
>gi|297868|emb|CAA51161.1| (X72497) ATPase [Odontella
sinensis] >gi|1185256|emb|CAA91739.1| (Z67753) ATP
synthase CF1 subunit beta [Odontella sinensis]
Length = 475
Score = 97.1 bits (238), Expect = 9e-19
Identities = 81/277 (29%), Positives = 122/277 (43%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ EE + + L+ N P AR T +T
Sbjct: 180 VSVFGGVGERTREGNDLYEEMKESGVINENNFKESKVALVYGQMNEPPGARMRVGLTALT 239
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 240 MAEYFRDVNKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI-- 297
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ GS++ I AV P D ++P T + L +LA + +PA++ L
Sbjct: 298 -----TSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPL 352
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + V E + + E LQ+ ELQ+I+ I+G D L E +R +
Sbjct: 353 DSTSTMLQP------GIVSGEHYEIAETVKETLQRYKELQDIIAILGIDELSEEDRLTVA 406
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V++ + F
Sbjct: 407 RARKV-ERFLSQPFFVAEIFTGSPGKYVSLEETIKGF 442
>sp|P50002|ATPB_ACEWO ATP SYNTHASE BETA CHAIN, SODIUM ION SPECIFIC (NA(+)-TRANSLOCATING
ATPASE BETA CHAIN) >gi|2118189|pir||I39748
Na+-transporting ATP synthase (EC 3.6.1.-) beta chain -
Acetobacterium woodii >gi|501149|gb|AAA79908.1| (U10505)
F1FO ATPase beta subunit [Acetobacterium woodii]
>gi|1096934|prf||2113197B Na ATPase:ISOTYPE=beta
[Acetobacterium woodii]
Length = 466
Score = 97.1 bits (238), Expect = 9e-19
Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 28/261 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N TQH + ++ G GER E D+ E + ++ +T L
Sbjct: 166 LINNIATQH-------GGLSVFAGVGERTREGNDLYYEMME-------SGVINKTALCFG 211
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR G+T+AEYFRD G DV L D+ R+ +A E+S L MP G
Sbjct: 212 QMNEPPGARMRIALAGLTMAEYFRDDEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 271
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ ER +T S GS++ + AV P D ++P T +
Sbjct: 272 YQPTLATEMGALQER----ITSTSK---GSITSVQAVYDPADDLTDPAPATTFAHLDATT 324
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L + + +PA++ L S S +D K V E + E+LQ+ ELQ+I
Sbjct: 325 VLSRAITEKGIYPAVDPLDSTSRILDP------KIVGQEHYETAREVQEILQRYKELQDI 378
Query: 905 VRIVGPDALPERERAILLVAR 925
+ I+G D L + ++ + AR
Sbjct: 379 IAILGMDELSDADKITVSRAR 399
>sp|O03069|ATPB_EQUAR ATP SYNTHASE BETA CHAIN >gi|1934690|gb|AAB51732.1| (U93824) ATP
synthase beta chain [Equisetum arvense]
Length = 473
Score = 97.1 bits (238), Expect = 9e-19
Identities = 81/277 (29%), Positives = 125/277 (44%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + K + L+ N P AR T +T
Sbjct: 196 VSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALT 255
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY LA+++ ER
Sbjct: 256 MAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGCLQERI-- 313
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ + GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 314 -----TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 368
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S ++ W V E + + LQ+ ELQ+I+ I+G D L E++R ++
Sbjct: 369 DSTST---VLQPWI---VGEEHYEVAQGVKQTLQRYKELQDIIAILGLDELSEQDRLLVA 422
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V++ + F
Sbjct: 423 RARKI-ERFLSQPFFVAEVFTGSPGKYVSLNETIRGF 458
>emb|CAB90085.1| (AJ235484) ATP synthase beta subunit [Gonocaryum litorale]
>gi|11558458|emb|CAC17758.1| (AJ400883) ATP synthase
subunit B [Gonocaryum litorale]
Length = 485
Score = 97.1 bits (238), Expect = 9e-19
Identities = 80/277 (28%), Positives = 121/277 (42%), Gaps = 15/277 (5%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V ++ G GER E D+ E + + L+ N P AR T +T
Sbjct: 188 VSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALT 247
Query: 744 IAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGR 802
+AEYFRD+ DV L D+ R+ +A E+S L MP GY L++++ ER
Sbjct: 248 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 305
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
+ + GS++ I AV P D ++P T + L LA + +PA++ L
Sbjct: 306 -----TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 360
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILL 922
S S + + V E K + LQ+ ELQ+I+ I+G D L E +R I+
Sbjct: 361 DSTSTMLQP------RIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEEDRLIVA 414
Query: 923 VARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
AR + E +L Q F P K V + + F
Sbjct: 415 RARKI-ERFLSQPFFVAEVFTGSPGKYVDLAETIRGF 450
>sp|P26527|ATPB_SYNY3 ATP SYNTHASE BETA CHAIN >gi|67845|pir||PWYBB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Synechocystis sp.
(strain PCC 6803) >gi|47516|emb|CAA41137.1| (X58129)
ATPase subunit beta [Synechocystis PCC6803]
>gi|1653171|dbj|BAA18087.1| (D90911) ATP synthase b
subunit [Synechocystis sp.]
Length = 483
Score = 96.7 bits (237), Expect = 1e-18
Identities = 85/298 (28%), Positives = 127/298 (42%), Gaps = 22/298 (7%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L++N QH V ++ G GER E D+ E + KP + L
Sbjct: 172 MMELINNIAIQH-------GGVSVFGGVGERTREGNDLYNEMIESNVINADKPEESKIAL 224
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR T +T+AEYFRD+ DV L D+ R+ +A E+S L MP
Sbjct: 225 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 284
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY L + + + ER + + GS++ I AV P D ++P T +
Sbjct: 285 AVGYQPTLGTDVGDLQERI-------TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 337
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L LA + +PA++ L S S + V E + LQ+ EL
Sbjct: 338 GTTVLSRGLAAKGIYPAVDPLDSTSTMLQP------SIVGSEHYDTAREVQSTLQRYKEL 391
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
Q+I+ I+G D L E +R + AR + E +L Q F P K V++ + F
Sbjct: 392 QDIIAILGLDELSEEDRLTVDRARKI-ERFLSQPFFVAEVFTGAPGKYVSLADTIKGF 448
>sp|P40291|YSCN_YERPS PROBABLE ATP SYNTHASE YSCN (YOPS SECRETION ATPASE)
>gi|388096|gb|AAA20119.1| (L23522) yscN [Yersinia
pseudotuberculosis] >gi|392946|gb|AAA73398.1| (U00998)
YscN [Yersinia pseudotuberculosis]
Length = 439
Score = 96.7 bits (237), Expect = 1e-18
Identities = 74/248 (29%), Positives = 112/248 (44%), Gaps = 27/248 (10%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TLL + L + ++ V + GERG E+ + +E G+ + +
Sbjct: 172 GGGKSTLLAS------LIRSAEVDVTVLALIGERGPEVREFIES-------DLGEEGLRK 218
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
L+ TS+ P R + + +IAEYFRD G V L+ DS +R+A A REI E
Sbjct: 219 AFLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEP 278
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P GYP + + L ERAG+ GS++ + V G D +EPV T +
Sbjct: 279 PTRRGYPPSVFAALPRLMERAGQ-------SSKGSITALYTVLVEGDDMTEPVADETRSI 331
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
+ L LA H+PAI+ L S S ++ + V E K LL K
Sbjct: 332 LDGHIILSRKLAAANHYPAIDVLRSASRVMNQI-------VSKEHKTWAGHLRRLLAKYE 384
Query: 900 ELQEIVRI 907
E++ +++I
Sbjct: 385 EVELLLQI 392
>gb|AAA22253.1| (M31107) ATP synthase beta subunit (atpD) (EC 3.6.1.3) [Bacillus
firmus]
Length = 467
Score = 96.3 bits (236), Expect = 1e-18
Identities = 73/264 (27%), Positives = 128/264 (47%), Gaps = 29/264 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H + + ++ G GER E D+ E T +++++ ++
Sbjct: 169 LINNIAQEHGV-------ISVFAGVGERTREGNDLYHEM-------TDSGVIKKSAMVFG 214
Query: 726 TSNMPVAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR A +G+T+AE+FRD G DV L + S + +A E+S L MP G
Sbjct: 215 QMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVVNIS-FTQAGSEVSALLGRMPSAVG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y LA+++ + ER + +VGSV+ I A+ P D+++P T +
Sbjct: 274 YQPTLATEMGQLQERI-------TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L+ L+ +PA++ L S S + + V E ++ + + LQK ELQ+I
Sbjct: 327 NLERKLSEMGIYPAVDPLASTSRALSP------EIVGEEHYSVARQVQQTLQKYKELQDI 380
Query: 905 VRIVGPDALPERERAILLVARMLR 928
+ I+G D L E ++ ++ AR ++
Sbjct: 381 IAILGMDELSEEDKLVVHRARRIQ 404
>sp|P55717|Y4YI_RHISN PROBABLE ATP SYNTHASE Y4YI >gi|2182734|gb|AAB91948.1| (AE000107)
Y4yI; HrcN homolog [Rhizobium sp. NGR234]
Length = 451
Score = 96.3 bits (236), Expect = 1e-18
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TL+ Q+ K + A VVI GERG E+ + +E G+ + R
Sbjct: 184 GGGKSTLIS------QIVKGAAADVVIVALIGERGREVREFVERH-------LGEEGLRR 230
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
+++ TS+ R +AEYFR+ G VAL+ DS +R+ A+REI E
Sbjct: 231 AIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEP 290
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P G+P + + L ERAG LG GS++ V G +P+ + + +
Sbjct: 291 PTRRGFPPSVFAALPGLLERAG----LGER---GSITAFYTVLVEGDGTGDPIAEESRGI 343
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
+ L LA R HFPAI+ L S S +DAV H+ ++ +LL + +
Sbjct: 344 LDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFR-------DLLARYA 396
Query: 900 ELQEIVRI----VGPDALPERERAILLVARMLREDYLQQDAFDEVDTY 943
E + ++ + G D P +RA+ + + +++L+Q DEV +
Sbjct: 397 ECEFLINVGEYKQGGD--PLTDRAVASIGEL--KEFLRQSE-DEVSDF 439
>sp|P00824|ATPB_ECOLI ATP SYNTHASE BETA CHAIN >gi|67830|pir||PWECB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Escherichia coli
>gi|41038|emb|CAA23527.1| (V00267) reading frame beta
[Escherichia coli] >gi|42277|emb|CAA23594.1| (V00311)
reading frame papB [Escherichia coli]
>gi|146325|gb|AAA83875.1| (M25464) H+ ATPase F1 beta
subunit [Escherichia coli] >gi|148139|gb|AAA24737.1|
(J01594) ATP synthase beta subunit (atp-8) [Escherichia
coli] >gi|290581|gb|AAA62084.1| (L10328) ATP synthase F1
beta subunit [Escherichia coli]
>gi|899257|emb|CAA25782.1| (X01631) uncD protein
[Escherichia coli] >gi|1790170|gb|AAC76755.1| (AE000450)
membrane-bound ATP synthase, F1 sector, beta-subunit
[Escherichia coli K12]
Length = 460
Score = 96.0 bits (235), Expect = 2e-18
Identities = 80/298 (26%), Positives = 127/298 (41%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E T ++++
Sbjct: 159 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHEM-------TDSNVIDKVS 204
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP
Sbjct: 205 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 264
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 265 AVGYQPTLAEEMGVLQERI-------TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 317
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PA++ L S S +D + V E +LQ+ EL
Sbjct: 318 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPLV------VGQEHYDTARGVQSILQRYQEL 371
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++I+ I+G D L E ++ ++ AR ++ +L Q F P K V++ + F
Sbjct: 372 KDIIAILGMDELSEEDKLVVARARKIQR-FLSQPFFVAEVFTGSPGKYVSLKDTIRGF 428
>pir||D64071 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Haemophilus
influenzae (strain Rd KW20)
Length = 468
Score = 96.0 bits (235), Expect = 2e-18
Identities = 82/298 (27%), Positives = 129/298 (42%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD ++++
Sbjct: 167 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHE---MKDSN----VLDKVS 212
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV D+ R+ A E+S L MP
Sbjct: 213 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 272
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 273 AVGYQPTLAEEMGVLQERI-------TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 325
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PA++ L S S +D + V E + +LQ+ EL
Sbjct: 326 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLV------VGQEHYDVARGVQGILQRYKEL 379
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++I+ I+G D L E ++ ++ AR + E +L Q F P K VT+ + F
Sbjct: 380 KDIIAILGMDELSEEDKLVVARARKI-ERFLSQPFFVAEVFTGSPGKYVTLKDTIRGF 436
>sp|P43715|ATPB_HAEIN ATP SYNTHASE BETA CHAIN >gi|1573457|gb|AAC22137.1| (U32730) ATP
synthase F1, subunit beta (atpD) [Haemophilus influenzae
Rd]
Length = 457
Score = 96.0 bits (235), Expect = 2e-18
Identities = 82/298 (27%), Positives = 129/298 (42%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD ++++
Sbjct: 156 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHE---MKDSN----VLDKVS 201
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV D+ R+ A E+S L MP
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 262 AVGYQPTLAEEMGVLQERI-------TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PA++ L S S +D + V E + +LQ+ EL
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLV------VGQEHYDVARGVQGILQRYKEL 368
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++I+ I+G D L E ++ ++ AR + E +L Q F P K VT+ + F
Sbjct: 369 KDIIAILGMDELSEEDKLVVARARKI-ERFLSQPFFVAEVFTGSPGKYVTLKDTIRGF 425
>sp|P42468|ATPB_BURCE ATP SYNTHASE BETA CHAIN >gi|587502|emb|CAA54204.1| (X76877) ATPase
beta-subunit [Burkholderia cepacia]
Length = 463
Score = 95.6 bits (234), Expect = 3e-18
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 28/284 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L++N +H ++ G GER E D E +KD ++++
Sbjct: 162 NMMELINNIAKEH-------GGYSVFAGVGERTREGNDFYHE---MKDSN----VLDKVA 207
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R + TG+T+AE+FRD G DV D+ R+ A E+S L MP
Sbjct: 208 LVYGQMNEPPGNR-LRVLTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPS 266
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ + ER + + GS++ + AV P D ++P T +
Sbjct: 267 AVGYQPTLAEEMGKLQERI-------TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLD 319
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L D+A +PA++ L S S +D + E ++ + + LQ+ EL
Sbjct: 320 ATVVLSRDIASLGIYPAVDPLDSTSRQIDP------NVIGEEHYSITRRVQQTLQRYKEL 373
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCP 945
++I+ I+G D L ++ + AR ++ Q EV T P
Sbjct: 374 RDIIAILGMDELSPEDKLSVARARKIQRFLSQPFHVAEVFTGSP 417
>gb|AAF19362.1|AF188265_8 (AF188265) ATP synthase subunit beta [Salmonella typhimurium]
Length = 460
Score = 95.6 bits (234), Expect = 3e-18
Identities = 79/298 (26%), Positives = 127/298 (42%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E T ++++
Sbjct: 159 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHEM-------TDSNVIDKVS 204
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP
Sbjct: 205 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 264
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 265 AVGYQPTLAEEMGVLQERI-------TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 317
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PA++ L S S +D + V E +LQ+ EL
Sbjct: 318 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPLV------VGQEHYDTARGVQSILQRYQEL 371
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++++ I+G D L E ++ ++ AR ++ +L Q F P K V++ + F
Sbjct: 372 KDVIAILGMDELSEEDKLVVARARKIQR-FLSQPFFVAEVFTGSPGKYVSLKDTIRGF 428
>sp|Q07232|ATPB_BUCAP ATP SYNTHASE BETA CHAIN >gi|2827018|gb|AAC38110.1| (AF008210) ATP
synthase subunit beta [Buchnera aphidicola]
Length = 466
Score = 95.2 bits (233), Expect = 3e-18
Identities = 79/276 (28%), Positives = 123/276 (43%), Gaps = 28/276 (10%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD K ++++
Sbjct: 165 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHE---MKDSK----VLDKVS 210
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 211 LVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 270
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 271 AVGYQPTLAEEMGLLQERI-------TSTKEGSITSVQAVYVPADDLTDPSPATTFAHLD 323
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PAI+ L S S +D V E +LQ+ EL
Sbjct: 324 STVTLSRQIAALGIYPAIDPLNSTSRQLDPYI------VGDEHYDTARGVQSILQRYQEL 377
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAF 937
++I+ I+G D L + ++ ++ AR ++ +L Q F
Sbjct: 378 KDIIAILGMDELSQEDKILVSRARKIQR-FLSQPFF 412
>pir||C82952 ATP synthase beta chain PA5554 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951894|gb|AAG08939.1|AE004967_10
(AE004967) ATP synthase beta chain [Pseudomonas
aeruginosa]
Length = 458
Score = 95.2 bits (233), Expect = 3e-18
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 28/298 (9%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD ++++
Sbjct: 157 NMMELIRNIAIEH-------SGYSVFAGVGERTREGNDFYHE---MKDSN----VLDKVA 202
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+T+AE FRD G DV L D+ R+ A E+S L MP
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 262
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ I AV P D ++P T +
Sbjct: 263 AVGYQPTLAEEMGVLQERI-------TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLD 315
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L D+A +PA++ L S S +D + + + +LQ+ EL
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLV------IGQDHYDTARGVQYVLQRYKEL 369
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF 959
++I+ I+G D L E ++ ++ AR ++ +L Q F P K V++ + F
Sbjct: 370 KDIIAILGMDELSEADKLLVARARKIQR-FLSQPFFVAEVFTGSPGKYVSLKDTIAGF 426
>gb|AAC38383.1| (AF022236) EscN [Escherichia coli]
Length = 446
Score = 93.6 bits (229), Expect = 1e-17
Identities = 82/294 (27%), Positives = 131/294 (43%), Gaps = 44/294 (14%)
Query: 680 SDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIY 739
+ A +++ GERG E+ + L P+ + + VL+ TS+ P R + +
Sbjct: 194 ASADIIVLALIGERGREVNEFLALLPQ--------STLSKCVLVVTTSDRPALERMKAAF 245
Query: 740 TGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
T TIAEYFRD G +V LM DS +R+A A R++ E G+P + S L + ER
Sbjct: 246 TATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLER 305
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
AG GS++ I V + ++P+ ++ L +LA HFPAI
Sbjct: 306 AGPAPK-------GSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAI 358
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAM--RDKAMELLQKESELQEIVRIVGPDALPERE 917
+ S S + V H E K + K +ELL + E +G D PE +
Sbjct: 359 DIGLSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEY-----TMGQD--PEAD 411
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGV 971
+AI R L ++++QQ D ++ Y+KT+E++ + V
Sbjct: 412 KAI--KNRKLIQNFIQQSTKD------------------ISSYEKTIESLFKVV 445
>gb|AAC31513.1| (AF071034) L0034 [Escherichia coli]
Length = 446
Score = 93.6 bits (229), Expect = 1e-17
Identities = 82/294 (27%), Positives = 131/294 (43%), Gaps = 44/294 (14%)
Query: 680 SDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIY 739
+ A +++ GERG E+ + L P+ + + VL+ TS+ P R + +
Sbjct: 194 ASADIIVLALIGERGREVNEFLALLPQ--------STLSKCVLVVTTSDRPALERMKAAF 245
Query: 740 TGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
T TIAEYFRD G +V LM DS +R+A A R++ E G+P + S L + ER
Sbjct: 246 TATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLER 305
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
AG GS++ I V + ++P+ ++ L +LA HFPAI
Sbjct: 306 AGPAPK-------GSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAI 358
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAM--RDKAMELLQKESELQEIVRIVGPDALPERE 917
+ S S + V H E K + K +ELL + E +G D PE +
Sbjct: 359 DIGLSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEY-----TMGQD--PEAD 411
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGV 971
+AI R L ++++QQ D ++ Y+KT+E++ + V
Sbjct: 412 KAI--KNRKLIQNFIQQSTKD------------------ISSYEKTIESLFKVV 445
>emb|CAB90064.1| (AJ235459) ATP synthase beta subunit [Dischidia lanceolata]
Length = 457
Score = 93.6 bits (229), Expect = 1e-17
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 22/270 (8%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N HQ V ++ G GER E D+ +E + + L+
Sbjct: 165 LINNIAKAHQ-------GVSVFAGVGERTREGNDLYKEMKESGVINEQNLSESKVALVYG 217
Query: 726 TSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR T +T+AEYFRD+ DV L D+ R+ +A E+S L +P G
Sbjct: 218 QMNEPPGARMXVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVG 277
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y L++++ ER + + GS++ I AV P D ++P T +
Sbjct: 278 YQPTLSTEMGSLQERI-------TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 330
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L LA + +PA++ L S S + K V E + + LQ+ E+Q+I
Sbjct: 331 VLSRGLAAKGIYPAVDPLDSTSTMLQP------KIVGDEHYETAQQVKQTLQRYKEVQDI 384
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQ 934
+ I+G D L E +R + AR + E +L Q
Sbjct: 385 IAILGLDELSEEDRLTVARARKI-ERFLSQ 413
>sp|P57124|ATPB_BUCAI ATP SYNTHASE BETA CHAIN >gi|10038701|dbj|BAB12736.1| (AP001118) ATP
synthase beta chain [Buchnera sp. APS]
Length = 465
Score = 93.6 bits (229), Expect = 1e-17
Identities = 77/276 (27%), Positives = 120/276 (42%), Gaps = 28/276 (10%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E ++++
Sbjct: 164 NMMELIRNIAVEH-------SGYSVFTGVGERTREGNDFYHEM-------NDSQVLDKVS 209
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 210 LVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPS 269
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY LA ++ ER + + GS++ + AV P D ++P T +
Sbjct: 270 AVGYQPTLAEEMGLLQERI-------TSTKNGSITSVQAVYVPADDLTDPSPATTFAHLD 322
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L +A +PAI+ L S S +D V E +LQ+ EL
Sbjct: 323 STVTLSRQIASLGIYPAIDPLNSTSRQLDPYI------VGDEHYETALGVQSILQRYQEL 376
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAF 937
++I+ I+G D L E+++ ++ AR ++ +L Q F
Sbjct: 377 KDIIAILGMDELAEKDKLLVSRARKIQR-FLSQPFF 411
>pir||A26926 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Anabaena sp
Length = 471
Score = 93.2 bits (228), Expect = 1e-17
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 37/278 (13%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L++N TQH V ++ G GER E D+ E + + L
Sbjct: 172 MMELINNIATQH-------GGVSVFAGVGERTREGNDLYNEM-----------IDSKNAL 213
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR +G+T+AEYFRD+ DV L D+ R+ +A E+S L MP
Sbjct: 214 VYGQMNEPPGARMRVGLSGLTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 273
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY L + + + ER +T ++ GS++ I AV P D ++P T +
Sbjct: 274 AVGYQPTLGTDVGQLQER----ITSTTE---GSITSIQAVYVPADDLTDPAPATTFAHLD 326
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNV--DPEWKAMRDKAMELLQKES 899
L LA + +PA++ L S S + N+ D + R LQ+
Sbjct: 327 GTTVLSRGLASKGIYPAVDPLGSTSTMLQP-------NIVGDEHYNTAR-AVQSTLQRYK 378
Query: 900 ELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAF 937
ELQ+I+ I+G D L E +R ++ AR + E +L Q F
Sbjct: 379 ELQDIIAILGLDELSEEDRLLVARARKV-ERFLSQPFF 415
>sp|P06540|ATPB_ANASP ATP SYNTHASE BETA CHAIN >gi|142006|gb|AAA21993.1| (M15336) ATPase
beta-subunit [Anabaena sp.]
Length = 471
Score = 93.2 bits (228), Expect = 1e-17
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 37/278 (13%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L++N TQH V ++ G GER E D+ E + + L
Sbjct: 172 MMELINNIATQH-------GGVSVFAGVGERTREGNDLYNEM-----------IDSKNAL 213
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR +G+T+AEYFRD+ DV L D+ R+ +A E+S L MP
Sbjct: 214 VYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 273
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY L + + + ER +T ++ GS++ I AV P D ++P T +
Sbjct: 274 AVGYQPTLGTDVGQLQER----ITSTTE---GSITSIQAVYVPADDLTDPAPATTFAHLD 326
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNV--DPEWKAMRDKAMELLQKES 899
L LA + +PA++ L S S + N+ D + R LQ+
Sbjct: 327 GTTVLSRGLASKGIYPAVDPLGSTSTMLQP-------NIVGDEHYNTAR-AVQSTLQRYK 378
Query: 900 ELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAF 937
ELQ+I+ I+G D L E +R ++ AR + E +L Q F
Sbjct: 379 ELQDIIAILGLDELSEEDRLLVARARKV-ERFLSQPFF 415
>emb|CAA50332.1| (X71013) ATP synthase beta subunit [Drosophila melanogaster]
Length = 500
Score = 93.2 bits (228), Expect = 1e-17
Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 32/306 (10%)
Query: 686 IYIGCGERGNEMTDVLEEFPK-----LKDPKTGKPLMERTVLIANTSNMPVAAREASIYT 740
++ G GER E D+ E + LKD KT K L+ N P AR T
Sbjct: 204 VFAGVGERTREGNDLYNEMIEGGVISLKD-KTSK-----VALVYGQMNEPPGARARVALT 257
Query: 741 GITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
G+T+AEYFRD G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 258 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQER 317
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
+ + GS++ + A+ P D ++P T + L +A +PA+
Sbjct: 318 I-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 370
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERA 919
+ L S S +D + E + ++LQ LQ+I+ I+G D L E ++
Sbjct: 371 DPLDSTSRIMDP------NIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKL 424
Query: 920 ILLVARMLREDYLQQDAFDEVDT-----YCPPEKQVT-MMRVLLNFYDKTMEAISRGV-P 972
+ AR ++ Q EV T P E+ + +L YD E V P
Sbjct: 425 TVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGP 484
Query: 973 LEEIAK 978
+EE+ +
Sbjct: 485 IEEVCR 490
>sp|Q25117|ATPB_HEMPU ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR
>gi|391913|dbj|BAA04178.1| (D17361) H(+)-transporting
ATPase beta subunit [Hemicentrotus pulcherrimus]
>gi|1094359|prf||2105433A H ATPase:SUBUNIT=beta
[Hemicentrotus pulcherrimus]
Length = 523
Score = 93.2 bits (228), Expect = 1e-17
Identities = 94/332 (28%), Positives = 143/332 (42%), Gaps = 42/332 (12%)
Query: 686 IYIGCGERGNEMTDVLEEFPK-----LKDPKTGKPLMERTVLIANTSNMPVAAREASIYT 740
++ G GER E D+ E + LKD + + L+ N P AR T
Sbjct: 227 VFAGVGERTREGNDLYHEMIEGGVISLKDDTS------KVALVYGQMNEPPGARARVALT 280
Query: 741 GITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
G+T+AEYFRD G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 281 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER 340
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
+ + GS++ + A+ P D ++P T + L +A +PA+
Sbjct: 341 I-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAV 393
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERA 919
+ L S S +D V ++ ++LQ LQ+I+ I+G D L E ++
Sbjct: 394 DPLDSSSRIMDP------NVVGERHYSIARGVQKILQDNKTLQDIIAILGMDELSEDDKL 447
Query: 920 ILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKL 979
+ AR ++ Q EV T P K V+M + F E+I +G E L
Sbjct: 448 TVSRARKIQRFLSQPFQVAEVFT-GSPGKLVSMAETIDGF-----ESIIKG----ECDHL 497
Query: 980 PVREEIGRMKFEPDVGKIKALIDKTNEQFEEL 1011
P EI VG I+ + DK + EEL
Sbjct: 498 P---EIAFYM----VGNIQDVKDKADRLAEEL 522
>sp|Q26976|VATB_TRYCO VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE B SUBUNIT)
>gi|480569|pir||S37050 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - Trypanosoma congolense
>gi|397638|emb|CAA81063.1| (Z25815) vacuolar ATPase
(regulatory (B) subunit) [Trypanosoma congolense]
Length = 485
Score = 93.2 bits (228), Expect = 1e-17
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 717 MERTVLIANTSNMPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISGR 775
ME+TVL N +N P R + +T AEY D G V ++ S +A+ALRE+S
Sbjct: 229 MEKTVLFMNLANDPTIERIVTPRLALTTAEYLAYDCGKHVLVILTDMSSYADALREVSAA 288
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
EE+PG G+P Y+ + LA YERAGRV+ R GS++ I ++ P D + P+
Sbjct: 289 REEVPGRRGFPGYMYTDLACIYERAGRVLG-----RAGSITQIPILTMPNDDITHPIPDL 343
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKA---- 891
T + + +D L R+ +P IN L S S + KN E RD +
Sbjct: 344 TGYITEGQIYVDRQLHNRQLYPPINILPSLSRLM--------KNAIGEGMTRRDHSGVSN 395
Query: 892 -MELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQV 950
M + ++ + +VG + L + L + ++ Q + D + +
Sbjct: 396 QMYARMRLDDILAMKAVVGEETLSSEDLLHLEFLEKFEKKFICQGFHESRDVFQSLDLCW 455
Query: 951 TMMR----VLLNFYD-KTMEAISRGVPL 973
++R VLLN D KT G P+
Sbjct: 456 QLLRIFPKVLLNKIDVKTRNEFYDGQPM 483
>sp|Q05825|ATPB_DROME ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR
>gi|542579|pir||JN0760 H+-transporting ATP synthase (EC
3.6.1.34) beta chain precursor - fruit fly (Drosophila
melanogaster) >gi|2133670|pir||S64699 H+-transporting
ATP synthase (EC 3.6.1.34) beta chain - fruit fly
(Drosophila melanogaster)
Length = 505
Score = 93.2 bits (228), Expect = 1e-17
Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 32/306 (10%)
Query: 686 IYIGCGERGNEMTDVLEEFPK-----LKDPKTGKPLMERTVLIANTSNMPVAAREASIYT 740
++ G GER E D+ E + LKD KT K L+ N P AR T
Sbjct: 209 VFAGVGERTREGNDLYNEMIEGGVISLKD-KTSK-----VALVYGQMNEPPGARARVALT 262
Query: 741 GITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
G+T+AEYFRD G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 263 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQER 322
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
+ + GS++ + A+ P D ++P T + L +A +PA+
Sbjct: 323 I-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 375
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERA 919
+ L S S +D + E + ++LQ LQ+I+ I+G D L E ++
Sbjct: 376 DPLDSTSRIMDP------NIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKL 429
Query: 920 ILLVARMLREDYLQQDAFDEVDT-----YCPPEKQVT-MMRVLLNFYDKTMEAISRGV-P 972
+ AR ++ Q EV T P E+ + +L YD E V P
Sbjct: 430 TVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGP 489
Query: 973 LEEIAK 978
+EE+ +
Sbjct: 490 IEEVCR 495
>gb|AAB69192.1| (AF005744) YsaN [Yersinia enterocolitica]
Length = 465
Score = 93.2 bits (228), Expect = 1e-17
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 661 GNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERT 720
G+ T L + + H +A D V+ IG ERG E+T+ + E P +T
Sbjct: 163 GSGKTSLMSMIMNHAVA---DICVIALIG--ERGREVTEFIHELQT-------SPRAAQT 210
Query: 721 VLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMP 780
+L+ TS+ P R + +AEYFRD G DV L DS +R+A ALR+++ E+P
Sbjct: 211 ILVYATSDSPAVERCNAALLATAMAEYFRDQGKDVLLFVDSMTRYARALRDVALAAGELP 270
Query: 781 GEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVV 840
GYPA + +L ER G + + GS++ V + S+P+ ++
Sbjct: 271 ARRGYPASVFEQLPLLLERPGAL-------QHGSITAFYTVLLESEEESDPIGDEIRSII 323
Query: 841 KVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHK 878
L A LA R H+PAI+ L S S V H+
Sbjct: 324 DGHIYLSAQLAGRGHYPAIDILHSISRVFSKVTTPQHR 361
>pir||B75009 ribonucleotide reductase (nrd) PAB1057 - Pyrococcus abyssi (strain
Orsay) >gi|5459026|emb|CAB50512.1| (AJ248288)
ribonucleotide reductase (nrd) [Pyrococcus abyssi]
Length = 2122
Score = 93.2 bits (228), Expect = 1e-17
Identities = 98/319 (30%), Positives = 150/319 (46%), Gaps = 42/319 (13%)
Query: 232 IPGPFGSGKCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGY 291
I G C GDT +LT++ GLI I++ I+ GKK + +T G
Sbjct: 714 IVGTTTGAACFTGDTRILTEK-GLIPIEE---IVHETGKKP-----------KVVTHAGL 758
Query: 292 KDGKIVEIKATHVYKGFSAGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDL 351
KD I+E Y + + T G ++KVT HK +NG + + K+L
Sbjct: 759 KD--IIE-----TYDNGEMEVFRVTTEDGYELKVTGDHKFLV--FDENGNPTLKPL-KEL 808
Query: 352 KKGDRI-IVAKKIDGGERVKLNIRVEQK-RGKKIRIPDVLDEKLAEFLGYLIADGTL--- 406
K GD + I+A + GGE V+L+ +E K +G + +P LDEKLA LG + ADG +
Sbjct: 809 KVGDYVYILAPEWKGGEYVELDTNIELKGKGYNVNLPSKLDEKLAYLLGIIYADGHIRHY 868
Query: 407 ------KPRTVAIY-NNDESLLR-RANELANELFNIEGK-IVKGRTVKALL-IHSKALVE 456
K + IY + DE+ ++ + E+F IE K +K K +L I S +V+
Sbjct: 869 FENGKRKNSKIEIYLHQDETEIKEKVKRYFKEIFGIEPKEFLKEEQHKVILVIPSTKIVK 928
Query: 457 FFSKLGVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEA 516
F G+ ++ K+ +VP+ + S P V+ AF+ + DG D+N I + S E
Sbjct: 929 FLEINGLLKD-KSENIRVPEAIFRSRPSVIAAFLAGFFDGDGSIDQNY-RIAFKSISREF 986
Query: 517 AYGFSYLLAKLGIYAIIRE 535
L LGI I+E
Sbjct: 987 IKEAQLLFLALGIVTSIQE 1005
Score = 73.0 bits (176), Expect = 2e-11
Identities = 102/383 (26%), Positives = 156/383 (40%), Gaps = 79/383 (20%)
Query: 224 QAKGGTAAIPGPFGSGKCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELE 283
+AKGG P CV G+T +LT E G IK ++L+K+ +GK E E
Sbjct: 1286 EAKGGPIRATNP-----CVVGETRILTPE-GYIKAEELFKLAKERGKMEAIAVEGIAEGG 1339
Query: 284 RP------ITLYGYKD-------GKIVEIK-----ATHVYKGFSAGMIEIRTRTGRKIKV 325
P I L G K G VE+ +V+K + +RT+ G +I
Sbjct: 1340 EPYAYSLEILLPGDKQVKYETVHGNAVEVADPVSVPAYVWKVGMKEVARVRTKEGYEITA 1399
Query: 326 TPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKKIDGGERVKLNIRVEQKRGKKIRI 385
T HKL T K KDLK GD+I++ + VE+ G
Sbjct: 1400 TLDHKLMTPEGWKE--------IKDLKPGDKILLPR-----------FEVEEDFGS---- 1436
Query: 386 PDVLDEKLAEFLGYLIADGTL--KPRTVAIYNN---DESLLRRANELANELFNIEGKIVK 440
+ + E LA LG+ I DG L K + Y N +E + + E+ + F I+ + +
Sbjct: 1437 -ESIGEDLAFVLGWFIGDGYLNVKDKRAWFYFNAEKEEEIAWKIREILAKRFEIKAEPHR 1495
Query: 441 GRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYY 500
L + KA E+ + V N+K ++P+ + +P + +F++ DGY
Sbjct: 1496 YGNQIKLGVRGKAY-EWLESI-VKTNEK----RIPEIVYRLKPNEIASFLRGLFSADGYV 1549
Query: 501 DENKGEIEIVTASEEAAYGFSYLLAKLGIYAII----------------REKIIGDKVYY 544
D N I + + S E LL GI + I E+ + YY
Sbjct: 1550 D-NDMAIRLTSKSRELLREVQDLLLLFGILSKIYERPYKREFKYTTKDGEERTYTTEGYY 1608
Query: 545 RVVISGESNLEKLGIERVG-RGY 566
+VI+ S K+ ER+G GY
Sbjct: 1609 ELVIANYS--RKIFAERIGLEGY 1629
>sp|Q57710|IF2P_METJA PROBABLE TRANSLATION INITIATION FACTOR IF-2 >gi|2127929|pir||G64332
FUN12/bIF-2 family probable translation initiation
factor homolog (intron-containing) - Methanococcus
jannaschii >gi|1590990|gb|AAB98248.1| (U67481)
translation initiation factor aIF-2 (infB)
[Methanococcus jannaschii]
Length = 1155
Score = 92.8 bits (227), Expect = 2e-17
Identities = 104/393 (26%), Positives = 167/393 (42%), Gaps = 90/393 (22%)
Query: 234 GPFGSGKCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKD 293
G GKC+ VLT E+G IKI+DL+KI GK+ V +E + I ++ +
Sbjct: 24 GHVDHGKCLMPHEKVLT-EYGEIKIEDLFKI----GKEIVEKDELKEIRKLNIKVHTLNE 78
Query: 294 -GKIVEIKATHVYKGFSAG-MIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDL 351
G+I I A +V+K G MI+++ + I TP H +T NG + A+++
Sbjct: 79 NGEIKIINAPYVWKLKHKGKMIKVKLKNWHSITTTPEHPF----LTNNGW----IKAENI 130
Query: 352 KKGDRIIVAKKIDGGERVK--------------LNIRVEQKRGKKIRIP----------- 386
KKG + + +KI G E + L ++V +K K + +P
Sbjct: 131 KKGMYVAIPRKIYGNEDFEKFIEFINSKILTNELIVKVNEKDLKNVELPSTKIYKKQKNV 190
Query: 387 ----DVLDEKLA---------------------------------EFLGYLIADGTLKPR 409
D+++ L F G + DG +
Sbjct: 191 FRSEDIIEHNLNIEKISFSPRIHRCGKPQHYIKLPKSLNEWKAIFYFAGVMFGDGCVD-- 248
Query: 410 TVAIYNNDESLLRRANELANELFNIEGKIVKGRTVKALLIHS--KALVEFFSKL-GVPRN 466
I NNDE + + L N IE + +K ++ ++ + AL+ L P
Sbjct: 249 --RIANNDEEVFNKLKSLNN--LGIEVERIKRKSSYEIIFKNGKNALINLLKILFDYPSE 304
Query: 467 KKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFSYLLAK 526
KK+ K+P+ L I+ E+V FIK Y DGY + + IE+++AS+E G S LL +
Sbjct: 305 KKSHNIKIPQILYIAPKELVAEFIKGYFDADGYVNLRQNRIEVISASKEFIEGLSILLLR 364
Query: 527 L----GIYAIIREKIIGDKVYYRVVISGESNLE 555
IY I + K YY++ I G+ NL+
Sbjct: 365 FEITSKIYEIKKSYKETKKKYYQLNIVGKRNLK 397
>pir||JC5798 F0F1-ATPase (EC 3.4.-.-) beta chain - Methanosarcina barkeri
>gi|2605819|gb|AAC38049.1| (AF028006) ATP synthase beta
subunit [Methanosarcina barkeri]
Length = 469
Score = 92.8 bits (227), Expect = 2e-17
Identities = 82/273 (30%), Positives = 128/273 (46%), Gaps = 29/273 (10%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
++HN V QHQ V I+ G GER E ++ + +KD ++ TV++
Sbjct: 168 MIHNVVKQHQ-------GVSIFCGIGERCREGEELYRD---MKDAG----VLPNTVMVFG 213
Query: 726 TSNMPVAAREASIYTGITIAEYFRD-MGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR +T +T+AEYFRD DV L+ D+ R+ +A E+SG + +MP G
Sbjct: 214 QMNEPPGARFRVGHTALTMAEYFRDDERRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLG 273
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y L ++L+E ER S G++ I AV P DF++P +T +
Sbjct: 274 YQPTLGTELSELEERI-------STTDAGAIMSIQAVYVPADDFTDPSAVHTFSHLSASI 326
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L A +PAI+ L S S K V + + + L + SEL++I
Sbjct: 327 VLSRKRASEGLYPAIDPLQSNS------KMATPGIVGERHYLLAQEIRQTLAQYSELKDI 380
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ ++G + L +R ++ AR L E +L Q F
Sbjct: 381 ISMLGLEQLSPEDRNVVARARRL-ERFLTQPFF 412
>gb|AAF59391.1| (AE003846) ATPsyn-beta gene product [Drosophila melanogaster]
Length = 505
Score = 92.8 bits (227), Expect = 2e-17
Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 32/306 (10%)
Query: 686 IYIGCGERGNEMTDVLEEFPK-----LKDPKTGKPLMERTVLIANTSNMPVAAREASIYT 740
++ G GER E D+ E + LKD KT K L+ N P AR T
Sbjct: 209 VFAGVGERTREGNDLYNEMIEGGVISLKD-KTSK-----VALVYGQMNEPPGARARVALT 262
Query: 741 GITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYER 799
G+T+AEYFRD G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 263 GLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQER 322
Query: 800 AGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAI 859
+ + GS++ + A+ P D ++P T + L +A +PA+
Sbjct: 323 I-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 375
Query: 860 NWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERA 919
+ L S S +D + E + ++LQ LQ+I+ I+G D L E ++
Sbjct: 376 DPLDSTSRIMDP------NIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKL 429
Query: 920 ILLVARMLREDYLQQDAFDEVDT-----YCPPEKQVT-MMRVLLNFYDKTMEAISRGV-P 972
+ AR ++ Q EV T P E+ + +L YD E V P
Sbjct: 430 TVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGP 489
Query: 973 LEEIAK 978
+EE+ +
Sbjct: 490 IEEVVE 495
>pir||G81024 ATP synthase F1, beta chain NMB1934 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227192|gb|AAF42263.1| (AE002542) ATP synthase F1,
beta subunit [Neisseria meningitidis MC58]
Length = 465
Score = 92.4 bits (226), Expect = 2e-17
Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 33/290 (11%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L++N H + + ++ G GER E D E +KD ++++
Sbjct: 157 NMMELINNIAKAH-------SGLSVFAGVGERTREGNDFYHE---MKDSN----VLDKVA 202
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRD------MGYDVALMADSTSRWAEALREISGR 775
++ N P R TG+T+AEYFRD G DV D+ R+ A E+S
Sbjct: 203 MVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSAL 262
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
L MP GY LA ++ ER T GS++ I AV P D ++P
Sbjct: 263 LGRMPSAVGYQPTLAEEMGRLQERITSTQT-------GSITSIQAVYVPADDLTDPSPAT 315
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELL 895
T + L D+A +PA++ L S S +D + + E + L
Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMV------LGQEHYDVARGVQSTL 369
Query: 896 QKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCP 945
QK EL++I+ I+G D L + ++ ++ AR ++ Q EV T P
Sbjct: 370 QKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSP 419
>gb|AAB17681.1| (L12251) putative ATPase [Sinorhizobium fredii]
Length = 450
Score = 91.7 bits (224), Expect = 4e-17
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 660 GGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMER 719
GG TL+ Q+ K + A V I+ +RG E+ + +E G+ + R
Sbjct: 183 GGGKSTLIS------QIVKGAAADVFIFALICQRGREVREFVERH-------LGEEGLRR 229
Query: 720 TVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEM 779
+++ TS+ R +AEYFR+ G VAL+ DS +R+ A+REI E
Sbjct: 230 AIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEP 289
Query: 780 PGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRV 839
P G+P + + L ERAG +G GS++ V G +P+ + + +
Sbjct: 290 PTRRGFPPSVFAALPGLLERAG----MGER---GSITAFYTVLVEGDGTGDPIAEESRGI 342
Query: 840 VKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKES 899
V L LA R HFPAI+ L S S +DAV H+ ++ +LL + +
Sbjct: 343 VDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFR-------DLLARYA 395
Query: 900 ELQEIVRI----VGPDALPERERAILLVARMLREDYLQQDAFDEVDTY 943
E + ++ + G D P +RA+ + + +++L+Q DEV +
Sbjct: 396 ECEFLINVGEYKQGGD--PLTDRAVASIGEL--KEFLRQSE-DEVSDF 438
>pir||C81970 H+-transporting ATP synthase (EC 3.6.1.34) beta chain NMA0519
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379262|emb|CAB83811.1| (AL162753) ATP
synthase beta chain [Neisseria meningitidis Z2491]
Length = 465
Score = 90.9 bits (222), Expect = 6e-17
Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 33/290 (11%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L++N H + + ++ G GER E D E +KD ++++
Sbjct: 157 NMMELINNIAKAH-------SGLSVFAGVGERTREGNDFYHE---MKDSN----VLDKVA 202
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRD------MGYDVALMADSTSRWAEALREISGR 775
++ N P R TG+T+AEYFRD G DV D+ R+ A E+S
Sbjct: 203 MVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSAL 262
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
L MP GY LA ++ ER T GS++ I AV P D ++P
Sbjct: 263 LGRMPSAVGYQPTLAEEMGCLQERITSTQT-------GSITSIQAVYVPADDLTDPSPAT 315
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELL 895
T + L D+A +PA++ L S S +D + + E + L
Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMV------LGQEHYDVARGVQSTL 369
Query: 896 QKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCP 945
QK EL++I+ I+G D L + ++ ++ AR ++ Q EV T P
Sbjct: 370 QKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSP 419
>pir||G82715 ATP synthase, beta chain XF1143 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106107|gb|AAF83953.1|AE003950_3
(AE003950) ATP synthase, beta chain [Xylella fastidiosa]
Length = 466
Score = 90.9 bits (222), Expect = 6e-17
Identities = 96/351 (27%), Positives = 148/351 (41%), Gaps = 50/351 (14%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L++N H + + ++ G GER E D E +KD ++++
Sbjct: 157 NMMELINNIAKAH-------SGLSVFAGVGERTREGNDFYHE---MKDSN----VLDKVA 202
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRD------MGYDVALMADSTSRWAEALREISGR 775
++ N P R TG+T+AEYFRD G DV L D+ R+ A E+S
Sbjct: 203 MVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVSAL 262
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
L MP GY LA ++ ER GS++ I AV P D ++P
Sbjct: 263 LGRMPSAVGYQPTLAEEMGVLQERITSTAN-------GSITSIQAVYVPADDLTDPSPAT 315
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELL 895
T + L +A +PA++ L S S +D + + E + + L
Sbjct: 316 TFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPL------IIGEEHYNTTQRVQQTL 369
Query: 896 QKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRV 955
QK +L++I+ I+G D L E ++ + AR + + Q EV T P K V +
Sbjct: 370 QKYKDLKDIIAILGMDELSEDDKLAVSRARKIERFFSQPFHVAEVFTGA-PGKYVPLKET 428
Query: 956 LLNFYDKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNE 1006
+ F +AI G E LP E+ M VG I+ +I+K N+
Sbjct: 429 IRGF-----KAIVDG----EYDHLP--EQAFYM-----VGNIEEVIEKANK 463
>sp|P50003|ATPB_PRODI ATP SYNTHASE BETA CHAIN >gi|285202|pir||A42697 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Prochloron didemni
>gi|150558|gb|AAA25556.1| (M86384) ATP synthase beta
subunit [Prochloron didemni]
Length = 483
Score = 89.7 bits (219), Expect = 1e-16
Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 663 MPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVL 722
M L++N H V ++ G GER E D+ E + K + L
Sbjct: 172 MMELINNIAINH-------GGVSVFGGVGERTREGNDLYNEMIESKVINADNLNESKIAL 224
Query: 723 IANTSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPG 781
+ N P AR + +T+AEYFRD+ DV L D+ R+ +A E+S L MP
Sbjct: 225 VYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 284
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
GY L + + + ER + + GS++ I AV P D ++P T +
Sbjct: 285 AVGYQPTLGTDVGDLQERI-------TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 337
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L LA + +PA++ L S S + A V + LQ+ EL
Sbjct: 338 GTTVLSRGLASKGIYPAVDPLDSTSTMLQA------GIVGEDHYNTARAVQSTLQRYKEL 391
Query: 902 QEIVRIVGPDALPERERAILLVARMLREDYLQQDAF-DEVDTYCP 945
Q+I+ I+G D L E +R I+ AR + E +L Q F EV T P
Sbjct: 392 QDIIAILGLDELSEEDRLIVDRARKV-ERFLSQPFFVAEVFTGAP 435
>sp|P07890|ATPB_SYNP6 ATP SYNTHASE BETA CHAIN >gi|67844|pir||PWYCB H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Synechococcus sp.
(strain PCC 6301) >gi|48024|emb|CAA29362.1| (X05925)
beta-subunit (AA 1-484) [Synechococcus PCC6301]
Length = 484
Score = 89.3 bits (218), Expect = 2e-16
Identities = 76/273 (27%), Positives = 117/273 (42%), Gaps = 22/273 (8%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L++N +H V ++ G GER E D+ +EF + + L+
Sbjct: 175 LINNIAKEH-------GGVSVFGGVGERTREGNDLYQEFKESGVIDEKNIANSKVALVYG 227
Query: 726 TSNMPVAAREASIYTGITIAEYFRDMG-YDVALMADSTSRWAEALREISGRLEEMPGEEG 784
N P AR + +T+AE+FRD+ DV L D+ R+ +A E+S L MP G
Sbjct: 228 QMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVG 287
Query: 785 YPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFW 844
Y L + + + ER + GS++ I AV P D ++P T +
Sbjct: 288 YQPTLGTDVGQLQERITSTLE-------GSITSIQAVYVPADDLTDPAPATTFAHLDATT 340
Query: 845 ALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEI 904
L LA + +PA++ L S S + V E LQ+ ELQ+I
Sbjct: 341 VLSRGLASKGIYPAVDPLDSTSTMLQP------SIVGEEHYRTARAVQSTLQRYKELQDI 394
Query: 905 VRIVGPDALPERERAILLVARMLREDYLQQDAF 937
+ I+G D L E +R + AR + E +L Q F
Sbjct: 395 IAILGLDELSEEDRQTVARARKI-EKFLSQPFF 426
>dbj|BAA23755.1| (AB009314) proton-translocating ATPase, beta subunit [Streptococcus
bovis]
Length = 469
Score = 88.9 bits (217), Expect = 2e-16
Identities = 86/324 (26%), Positives = 143/324 (43%), Gaps = 40/324 (12%)
Query: 666 LLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIAN 725
L+HN +H + ++ G GER E D+ E + ++E+T ++
Sbjct: 168 LIHNIAQEH-------GGISVFTGVGERTREGNDLYWEMKE-------SGVIEKTAMVFG 213
Query: 726 TSNMP-VAAREASIYTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEE 783
N P + AR TG+TIAEYFRD+ G DV L D+ R+ +A E+S L MP
Sbjct: 214 QRNEPTLGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAV 273
Query: 784 GYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVF 843
GY LA+++ + ER + S +V + + P D+++P +
Sbjct: 274 GYQPTLATEMGQLQER------ITSTKKV-LLHQSKPSTVPADDYTDPAPATAFAHLDST 326
Query: 844 WALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQE 903
L+ L + +PA++ L S S + + V E + + +LQ+ ELQ+
Sbjct: 327 TNLERKLTQMGIYPAVDPLASSSRALAP------EIVGQEHYEVATEVQRVLQRYRELQD 380
Query: 904 IVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVD-------TYCPPEKQVT-MMRV 955
I+ I+G D L + E+ LV R R + F+ + +Y P + V +
Sbjct: 381 IIAILGMDELSDEEKT--LVGRARRIQFFLSQNFNVAEQFTGMPGSYVPVAETVRGFKEI 438
Query: 956 LLNFYDKTMEAISRGV-PLEEIAK 978
L YD E R V P+E++ +
Sbjct: 439 LEGKYDDLPEDAFRNVGPIEDVVE 462
>pir||H71143 probable ribonucleoside-diphosphate reductase - Pyrococcus
horikoshii >gi|3256754|dbj|BAA29437.1| (AP000002) 1291aa
long hypothetical ribonucleoside-diphosphate reductase
[Pyrococcus horikoshii]
Length = 1291
Score = 87.4 bits (213), Expect = 7e-16
Identities = 137/520 (26%), Positives = 219/520 (41%), Gaps = 129/520 (24%)
Query: 224 QAKGGTAAIPGPFGSGKCVDGDTLVLTKEFGLIKIKDLYKILDGK--GKKTV------NG 275
+AKGG P CV GDT +LT E G +KI+DL+++ + G+K V G
Sbjct: 456 EAKGGPIRATNP-----CVVGDTRILTPE-GYLKIEDLFRMAKERNNGEKVVAVEGIAEG 509
Query: 276 NEEWT---------ELERPITLYGYKDGKI------VEIKATHVYKGFSAGMIEIRTRTG 320
EE+ E E+ + +Y GK +E+KA +V+K + I+T+ G
Sbjct: 510 GEEFAYPVAILLPNEEEKEV-IYETVHGKQLAIADPIEVKA-YVWKVGKKKVARIKTKEG 567
Query: 321 RKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKKIDGGERVKLNIRVEQKRG 380
+I T HK+ +TK+G + E DLK+GD I++ + VE G
Sbjct: 568 YEIIATLDHKI----MTKDGWKAVE----DLKEGDLIVLPR-----------FEVEDNFG 608
Query: 381 KKIRIPDVLDEKLAEFLGYLIADGTLKP--RTVAIYNN---DESLLRRANELANELFNIE 435
+ + E LA LG+LI DG + + V Y N +E + ++ +E+ + FN +
Sbjct: 609 S-----ESIGEDLAFVLGWLIGDGYINTDDKRVWFYFNAEKEEEIAQKISEILKKRFNSK 663
Query: 436 GKIVKGRTVKALLIHSKALVEFFSKLGVPRNKKARTWKVPKELLISEPEVVKAFIKAYIM 495
+ + + L + +A +FF K+ V N K +VP+ + +P ++AF++
Sbjct: 664 AEPHRYGSEIKLGVRGEAY-KFFEKI-VKTNDK----RVPEIVYHLKPNEIRAFLRGLFT 717
Query: 496 CDGYYDENKGEIEIVTASEEAAYGFSYLLAKLGIYAIIRE----------------KIIG 539
DGY D N G I + + S E LL GI + I E K+
Sbjct: 718 ADGYVD-NDGAIRLTSKSRELLRDVQDLLLLFGIISKIYERPYKGTFEYTTKEGEKKVYT 776
Query: 540 DKVYYRVVISGESN---LEKLGIE------------RVGRGYTSYDIVPVEVEELYNALG 584
+ YY +VI+ S EK+G E ++ Y + V + EE+ L
Sbjct: 777 AQGYYELVIANYSRKLFAEKIGFEGEKQKKIKLNKTKIDEPYARVESVEIIGEEIVYDLT 836
Query: 585 RPYAELKRAGIEIHNYLS--------GENMSYEMFR------KFAKFVGMEEIAENHLTH 630
P IH+Y+S GE YE AKFV + EN +
Sbjct: 837 VP---------GIHSYISNGFISHNCGEEPLYEYESCNLASINLAKFVKYD---ENGKPY 884
Query: 631 VLFDEIVEIRYISEGQEVYDVTTETHNFIGGNMPTLLHNT 670
+DE + I + + D + + F +P + HNT
Sbjct: 885 FDWDEYAYV--IQKVTKYLDNAIDVNKF---PLPEIDHNT 919
>sp|P22550|VATB_CANTR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KD SUBUNIT)
>gi|102004|pir||S13080 H+-transporting ATPase (EC
3.6.1.35) chain B, vacuolar - yeast (Candida tropicalis)
>gi|2654|emb|CAA38656.1| (X54875) vacuolar ATPase subunit
b [Candida tropicalis]
Length = 511
Score = 86.6 bits (211), Expect = 1e-15
Identities = 77/297 (25%), Positives = 139/297 (45%), Gaps = 30/297 (10%)
Query: 717 MERTVLIANTSNMPVAAREASIYTGITIAEY--FRDMGYDVALMADSTSRWAEALREISG 774
+ERT L N +N P R + +T AE+ ++ + + ++ D +S +A+ALRE+S
Sbjct: 235 LERTTLFLNLANDPTIERIITPRLALTTAEFLAYQTERHVLTILTDMSS-YADALREVSA 293
Query: 775 RLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQ 834
EE+PG GYP Y+ + L+ YERAGRV + R GS++ + ++ P D + P+
Sbjct: 294 AREEVPGRRGYPGYMYTDLSTIYERAGRV-----EGRNGSITQVPILTMPNDDITHPIPD 348
Query: 835 NTLRVVKVFWALDADLARRRHFPAINWLTSYS-LYVDAVKDWWHKNVDPEWKAMRDKAME 893
T + + +D L R +P IN L S S L A+ + + K D + +
Sbjct: 349 LTGYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSAIGEGMTR------KDHGDVSNQ 402
Query: 894 LLQKES---ELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQV 950
L K + + + +VG +AL ++ L ++++ Q A++ + + +
Sbjct: 403 LYAKYAIGKDAAAMKAVVGEEALSTEDKLSLEFLEKFEKNFISQGAYENRTIF----ESL 458
Query: 951 TMMRVLLNFYDKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQ 1007
+ LL Y K M L I+ + E GR + + D + + DK+ ++
Sbjct: 459 DLAWSLLRIYPKEM--------LNRISPKILEEFYGRDREQDDDEEEEEDPDKSGDK 507
>sp|Q08637|NTPB_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT B (NA(+)-TRANSLOCATING ATPASE
SUBUNIT B) >gi|421414|pir||B46733 Na+-transporting
ATPase (EC 3.6.1.-) chain B - Enterococcus hirae
>gi|391682|dbj|BAA02970.1| (D13816) Na+ -ATPase beta
subunit [Enterococcus hirae] >gi|487279|dbj|BAA04276.1|
(D17462) Na+ -ATPase subunit B [Enterococcus hirae]
Length = 458
Score = 85.4 bits (208), Expect = 3e-15
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 17/280 (6%)
Query: 658 FIGGNMP--TLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKP 715
F G +P L Q + SD V++ G E +E+F + TG
Sbjct: 150 FSGSGLPHKELAAQIARQATVLDSSDDFAVVFAAIGITFEEAEFFMEDFRQ-----TGA- 203
Query: 716 LMERTVLIANTSNMPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISG 774
++R+V+ N +N P R A+ +T AEY + G V ++ + +AEALREIS
Sbjct: 204 -IDRSVMFMNLANDPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISA 262
Query: 775 RLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQ 834
E+PG GYP YL + LA +ERAGR+ L GSV+ I ++ P D + P+
Sbjct: 263 ARREVPGRRGYPGYLYTNLATLFERAGRIRGL-----KGSVTQIPILTMPEDDKTHPIPD 317
Query: 835 NTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMEL 894
T + + L +L + P I+ L S S D K + A ++
Sbjct: 318 LTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLKD--KGTGAGKTREDHAATMNQLFAA 375
Query: 895 LQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQ 934
+ + +E+ ++G AL + ++ A +Y+ Q
Sbjct: 376 YAQGKQAKELAVVLGESALSDIDKIYAKFAERFENEYVNQ 415
>gb|AAD55091.1|AF179250_1 (AF179250) vacuolar-type H+ transporting ATPase B1 subunit
[Anguilla anguilla]
Length = 503
Score = 85.4 bits (208), Expect = 3e-15
Identities = 72/273 (26%), Positives = 123/273 (44%), Gaps = 17/273 (6%)
Query: 717 MERTVLIANTSNMPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISGR 775
M+ L N +N P R + +T AEY V ++ S +AEALRE+S
Sbjct: 245 MDNVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLVILTDMSSYAEALREVSAA 304
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
EE+PG G+P Y+ + LA YERAGRV + R GS++ I ++ P D + P+
Sbjct: 305 REEVPGRRGFPGYMYTDLATIYERAGRV-----EGRNGSITQIPILTMPNDDITHPIPDL 359
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYS-LYVDAVKDWWHKNVDPEWKAMRDKAMEL 894
T + + +D L R+ +P IN L S S L A+ + + + + ++
Sbjct: 360 TGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRK---DHADVSNQLYAC 416
Query: 895 LQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMR 954
++Q + +VG +AL + L + ++++ Q +D Y + + +
Sbjct: 417 YAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQGPYDNRTVY----ETLDIGW 472
Query: 955 VLLNFYDKTMEAISRGVPLEEIAKLPVREEIGR 987
LL + K M + +P +A+ RE R
Sbjct: 473 QLLRIFPKEM---LKRIPQSTLAEFYPRESAAR 502
>gb|AAD33861.1| (AF140022) V-type ATPase B subunit [Oncorhynchus mykiss]
Length = 502
Score = 85.0 bits (207), Expect = 4e-15
Identities = 72/273 (26%), Positives = 123/273 (44%), Gaps = 17/273 (6%)
Query: 717 MERTVLIANTSNMPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISGR 775
M+ L N +N P R + +T AEY V ++ S +AEALRE+S
Sbjct: 244 MDNVCLFLNLANDPTIERIITPRLALTSAEYLAYQCEKHVLVILTDMSSYAEALREVSAA 303
Query: 776 LEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQN 835
EE+PG G+P Y+ + LA YERAGRV + R GS++ I ++ P D + P+
Sbjct: 304 REEVPGRRGFPGYMYTDLATIYERAGRV-----EGRNGSITQIPILTMPNDDITHPIPDL 358
Query: 836 TLRVVKVFWALDADLARRRHFPAINWLTSYS-LYVDAVKDWWHKNVDPEWKAMRDKAMEL 894
T + + +D L R+ +P IN L S S L A+ + + + + ++
Sbjct: 359 TGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRK---DHADVSNQLYAC 415
Query: 895 LQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMR 954
++Q + +VG +AL + L + ++++ Q +D Y + + +
Sbjct: 416 YAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQGPYDNRTVY----ETLDIGW 471
Query: 955 VLLNFYDKTMEAISRGVPLEEIAKLPVREEIGR 987
LL + K M + +P +A+ RE R
Sbjct: 472 QLLRIFPKEM---LKRIPQSTLAEFYPRESAAR 501
>sp|Q58446|RPA2_METJA DNA-DIRECTED RNA POLYMERASE SUBUNIT A" >gi|2127865|pir||B64430
DNA-directed RNA polymerase (EC 2.7.7.6) subunit A''
(intein-containing) - Methanococcus jannaschii
>gi|1591697|gb|AAB99047.1| (U67547) DNA-directed RNA
polymerase, subunit A'' (rpoA2) [Methanococcus
jannaschii]
Length = 859
Score = 83.9 bits (204), Expect = 8e-15
Identities = 123/492 (25%), Positives = 205/492 (41%), Gaps = 64/492 (13%)
Query: 248 VLTKEFGLIKIKDLYKILDGKGKK---TVNGNEEWTELERPITLYGY---KDGKIVEIKA 301
++ KE IK ++ K++D ++ GN E +L PI +Y +D K+ +
Sbjct: 83 IIIKEGEFIKPVEIGKLVDEMIERFGFEKIGNSEVCDL--PIDIYALSLDQDEKVHWKRI 140
Query: 302 THVYKGFSAG-MIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVA 360
+ G +I+I+T++GR+I TP H V + +I V +LK GDRI V
Sbjct: 141 ISCIRHKHNGKLIKIKTKSGREITATPYHSF----VIRKDNKIIPVKGSELKIGDRIPVV 196
Query: 361 KKIDGGERVKLNI-----------RVEQKRGKKIR---IPD--VLDEKLAEFLGYLIADG 404
K I +NI + K KI IP+ LD F+G +A+G
Sbjct: 197 KHIPANCVEAINISDYVSGNYVVDNINNKIAPKINGKSIPNNIKLDYDFGYFIGIYLAEG 256
Query: 405 TLKPRTVAIYNNDESLLRRANELANELFNIEGKIVKGRTVKA---LLIHSKALVEFFSKL 461
++ V+I N DE +L + A++L G+ + I+S L EF S
Sbjct: 257 SVTKYFVSISNVDELILNKIRAFADKLGLNYGEYDNNNGFAESHDIRIYSSTLAEFLSNF 316
Query: 462 GVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYGFS 521
G N K K+ + + + E V+ I+ Y DG + ++ I + + S+E G +
Sbjct: 317 GTSSNTK----KIAEFVFGANKEFVRGLIRGYFDGDGNVNADRKVIRVTSNSKELIDGIA 372
Query: 522 YLLAKLGIYAI----------IREKIIGDKVYYRVVISGE---SNLEKL-GIERVGRGYT 567
LLA+ I++I I K + + S E S LE+L + Y
Sbjct: 373 ILLARFNIFSIKTKTKNQFVLIIPHRYAKKFHEEINFSVEKKKSELERLVSSLNDDKTYD 432
Query: 568 SYDIVPVEVEELYNALGR--PYAELKRAGIEIHNYLSGENMSYEMFR----KFAKFVGME 621
S D++P + + LG Y ++ E + + + R K V +
Sbjct: 433 SIDMIP-SIGDALTKLGEKVDYPKVILKKFERKQKIGRATLQRHLRRIEELAVKKGVNIL 491
Query: 622 EIAENHL------THVLFDEIVEIRYIS-EGQEVYDVTTETHNFIGGNMPTLLHNTVTQH 674
+ E L + V++DEIV+I IS + + VYD++ E L HNT+
Sbjct: 492 ALKEYWLLKKAVESDVIWDEIVKIEEISCDKKYVYDISVEGLETFTTFDGVLTHNTMRTF 551
Query: 675 QLAKWSDAQVVI 686
A ++ V +
Sbjct: 552 HYAGVAEINVTL 563
>pir||C71110 hypothetical protein PH0650 - Pyrococcus horikoshii
>gi|3257058|dbj|BAA29741.1| (AP000003) 1136aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 1136
Score = 81.1 bits (197), Expect = 5e-14
Identities = 109/453 (24%), Positives = 188/453 (41%), Gaps = 117/453 (25%)
Query: 312 MIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKK--------- 362
+I I+TRTG ++ +T H LF NG +R+ A +LK GDR+ V
Sbjct: 531 LIRIKTRTGNEVILTRSHPLFA---FSNGDVVRKE-AGNLKVGDRVAVMMNPPKPPQTKA 586
Query: 363 -IDGGERVKLNIRVEQKRGK-KIRIPDV-----------------------LDEKLAEFL 397
+D K++ GK I++P+ +DEKL+
Sbjct: 587 VVDLSIYAKISDYYLVPNGKGMIKVPNKGLPPEKAQYLVSVNSHPVKLVREVDEKLSYLA 646
Query: 398 GYLIADGTLKPRTV---AIYNNDESLLRRANELANELFNIEGKIVKGRTVKALLIHSKAL 454
G ++ DG + A +++++ + + +++ + N + + + + SK
Sbjct: 647 GVILGDGYISSNGYYISATFDDEDYMEAFVSVISDFIPNYIPNVKENGKYMVVTVGSKIF 706
Query: 455 VEFFSKL-GVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTAS 513
E S++ G+P+ +K W VP ++++S ++++ FI DGY DEN I +VT S
Sbjct: 707 AEMLSRIFGIPKGRKLE-WDVP-DIVLSNDDLMRYFIAGLFDADGYVDEN--SIILVTKS 762
Query: 514 EEAAYGFSYLLAKLGIYAI---IREKIIGDKVYYRVVISGESNLEK-------------- 556
E A Y L +LGI + ++ K + +RV+ISG +L K
Sbjct: 763 ENVARKIWYALQRLGIISTVSRVKNKGFKEGEIFRVIISGVDDLAKFARSIPLHHSRKRA 822
Query: 557 -----LGIERVGRGYTSYDIVPVEVE---ELYNALGRPYAELKRAGIEIHNYLSGENMSY 608
L ++ RG +Y VP+ E L LG +EL + + ++ +GE +S
Sbjct: 823 KLMEVLKTKKTHRGRRAYR-VPISAEMIAPLRQMLGLTVSELSK----LASHYAGEKVSE 877
Query: 609 EMFR-----------------------KFAKFVGMEE----------IAENHLTHVLFDE 635
+ R + AK VG EE IAE V +DE
Sbjct: 878 SLIRHVEKGRVKEIRRSTLRGIALALQQVAKDVGDEEAWVKARRLQLIAEG---DVYWDE 934
Query: 636 IVEIRYISEG----QEVYDVTTE-THNFIGGNM 663
+V + + + VYD+T E HN++ +
Sbjct: 935 VVSVEEVDPKELGIEYVYDLTVEDDHNYVANGI 967
>emb|CAB75846.1| (AJ250266) ATP synthase beta chain [Amphidinium operculatum]
Length = 548
Score = 80.0 bits (194), Expect = 1e-13
Identities = 82/296 (27%), Positives = 124/296 (41%), Gaps = 29/296 (9%)
Query: 686 IYIGCGERGNEMTDVLEEFPK----LKDPKTGKPLME---RTVLIANTSNMPVAAREASI 738
++ G GER E D+ E + L + P + L+ N AR
Sbjct: 257 LFSGIGERSREANDLYVEMQESGIILLAEDSSNPYFSAESKVALVFGQMNDTPGARFRVA 316
Query: 739 YTGITIAEYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFY 797
+T+AEYFRD+ G D+ + D+ R+ +A E+S L MP GY LA+++
Sbjct: 317 NAALTMAEYFRDVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQ 376
Query: 798 ERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFP 857
ER V TL GS++ I AV P D ++P + L LA + +P
Sbjct: 377 ERI--VPTL-----FGSITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYP 429
Query: 858 AINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERE 917
A++ L S S + A V + ++ L + ELQ+++ I+G D L E +
Sbjct: 430 AVDPLASTSKALTA------SFVGERHYNVAQSIIQCLNRYKELQDLIAILGLDELSESD 483
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNF-------YDKTMEA 966
R +L R + E +L Q F P K V + L F YD EA
Sbjct: 484 RLSVLRGRKI-ERFLSQPFFVAEVFSRTPGKYVKVEEALDGFDGILTGRYDDRAEA 538
>sp|P11593|VATB_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT B (V-ATPASE 57 KD SUBUNIT)
>gi|83766|pir||A30800 H+-transporting ATPase (EC
3.6.1.35) 57K chain, vacuolar - Neurospora crassa
>gi|168928|gb|AAA33622.1| (J03956) vacuolar ATPase vma-2
[Neurospora crassa]
Length = 513
Score = 78.8 bits (191), Expect = 3e-13
Identities = 67/251 (26%), Positives = 112/251 (43%), Gaps = 20/251 (7%)
Query: 719 RTVLIANTSNMPVAAREASIYTGITIAEYFR-DMGYDVALMADSTSRWAEALREISGRLE 777
RT L N +N P R + +T AEY+ + V ++ S + +ALRE+S E
Sbjct: 231 RTTLFLNLANDPTIERIITPRLALTTAEYYAYQLEKHVLVILTDLSSYCDALREVSAARE 290
Query: 778 EMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTL 837
E+PG G+P Y+ + L+ YERAGRV R GS++ I ++ P D + P+ T
Sbjct: 291 EVPGRRGFPGYMYTDLSTIYERAGRVAG-----RNGSITQIPILTMPNDDITHPIPDLTG 345
Query: 838 RVVKVFWALDADLARRRHFPAINWLTSYS-LYVDAVKDWWHKNVDPEWKAMRDKAMELLQ 896
+ + +D L R +P IN L S S L A+ + + K D + +L
Sbjct: 346 YITEGQIFVDRGLHNRGIYPPINVLPSLSRLMKSAIGEGMTR------KDHGDVSNQLYA 399
Query: 897 KES---ELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMM 953
K + + + +VG +AL ++ L ++ Q ++ + + + +
Sbjct: 400 KYAIGRDAAAMKAVVGEEALSNEDKLSLEFLDKFERSFIAQGPYESRTIF----ESLDLA 455
Query: 954 RVLLNFYDKTM 964
LL Y K M
Sbjct: 456 WSLLRIYRKDM 466
>sp|O66907|ATPA_AQUAE ATP SYNTHASE ALPHA CHAIN >gi|7436078|pir||G70359 ATP synthase F1
alpha subunit - Aquifex aeolicus
>gi|2983261|gb|AAC06855.1| (AE000701) ATP synthase F1
alpha subunit [Aquifex aeolicus]
Length = 503
Score = 78.4 bits (190), Expect = 4e-13
Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 37/342 (10%)
Query: 676 LAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAARE 735
LA+ + IY+ G++ + ++E + + ME T ++ +++ P + +
Sbjct: 185 LAQKNSDVYCIYVAVGQKRAAIARLIELLER-------EGAMEYTTVVVASASDPASLQY 237
Query: 736 ASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASK 792
+ + G TI EYFRD G ++ D S+ AEA R++S + PG E YP YL S+
Sbjct: 238 LAPFVGCTIGEYFRDNGKHALIIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSR 297
Query: 793 LAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLAR 852
L E R L D GS++ + + GD + + N + + L+ADL
Sbjct: 298 LLE------RAAKLNDDLGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEADLFN 351
Query: 853 RRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDA 912
+ PAIN S S A + KAM+ A L + ++ +E+ V +
Sbjct: 352 KGIRPAINVGLSVSRVGGAA----------QIKAMKQVAGTLRLELAQFRELEAFVQFAS 401
Query: 913 LPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVP 972
++ + + + L+Q+ ++ + P EKQ+ ++ + Y +P
Sbjct: 402 ELDKATQQQINRGLRLVELLKQEPYNPI----PVEKQIVLIYAGTHGY-------LDDIP 450
Query: 973 LEEIAKLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKK 1014
+E + K PD+ K + K +E+ E+ K+
Sbjct: 451 VESVRKFEKELYAYLDNERPDILKEISEKKKLDEELEKKIKE 492
>sp|Q07405|ATPA_MYXXA ATP SYNTHASE ALPHA CHAIN (59 KD MEMBRANE-ASSOCIATED GTP-BINDING
PROTEIN) >gi|286117|dbj|BAA03725.1| (D16176) proton
translocating ATPase [Myxococcus xanthus]
>gi|741014|prf||2006275A 59kD membrane-associated
GTP-binding protein [Myxococcus xanthus]
Length = 515
Score = 78.0 bits (189), Expect = 5e-13
Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 49/346 (14%)
Query: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
IY+ G++ + + V+E+ + ME T ++A+ ++ P + + Y G+ +
Sbjct: 194 IYVAIGQKQSTVAQVVEKLNRYG-------AMEYTTVVASNASDPAPMQFFAPYAGVAMG 246
Query: 746 EYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERAGR 802
EYFRD ++ D S+ A A R++S L PG E YP Y+ S+L E R
Sbjct: 247 EYFRDNKMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYVHSRLLE------R 300
Query: 803 VVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWL 862
L + GS++ + + GD S + N + + L+ DL PAIN
Sbjct: 301 AAKLSDEEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAINVG 360
Query: 863 TSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIV--GPDALPERERAI 920
S S A + KAM+ A + + ++ +E+ G D + +
Sbjct: 361 LSVSRVGSAA----------QIKAMKQVAGTMKLELAQYRELAAFAQFGSDLDKATQETL 410
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAKLP 980
ARM+ + L+Q ++ + P EKQV + N D R +P ++ +
Sbjct: 411 ARGARMV--ELLKQGQYEPM----PVEKQVMQIYAATNRDDPKKRGWIRDIPTADVVRW- 463
Query: 981 VRE--EIGRMKFEPDVGK-----------IKALIDKTNEQFEELFK 1013
+RE E K P+V K IK + K +F E+F+
Sbjct: 464 MREFLEFADGK-HPNVAKDLASKRELTADIKTALSKAITEFNEVFQ 508
>sp|Q02848|ATPA_ANTSP ATP SYNTHASE ALPHA CHAIN >gi|485445|pir||S26962 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - red alga
(Antithamnion sp.) chloroplast (strain LB 95.79)
>gi|14177|emb|CAA44984.1| (X63382) atpA [Antithamnion
sp.]
Length = 505
Score = 76.1 bits (184), Expect = 2e-12
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 47/339 (13%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V +Y+ G++ + + V+ + K +E T+++A ++ P + + YTG
Sbjct: 195 VCVYVAIGQKASSVAQVVSTLEE-------KGALEYTIVVAANADEPATLQYIAPYTGAA 247
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
+AEYF G ++ D ++ A+A R++S L PG E YP YL S+L E
Sbjct: 248 LAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE----- 302
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L D GS++ + + GD S + N + + L DL PAIN
Sbjct: 303 -RAAKLNQDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAIN 361
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMEL---LQKESELQEIVRIVGPDALPERE 917
S S A + KAM+ A +L L + +EL+ + L +
Sbjct: 362 VGISVSRVGSAA----------QIKAMKQVAGKLKLELAQFAELEAFSQFASD--LDKAT 409
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIA 977
+ L + LRE Q ++ P E+Q ++ +N Y +E L ++
Sbjct: 410 QNQLARGQRLREILKQAQ-----NSPIPVEEQTAIIYAGINGYLDEVE-------LSQVK 457
Query: 978 K--LPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKK 1014
L +RE++ K P+ G+ K N EE+ KK
Sbjct: 458 DFVLALREDLRNSK--PEFGESILSTKKLNPDSEEILKK 494
>gb|AAB88551.1| (AF036246) putative F1-ATP synthase alpha subunit [Rickettsia
prowazekii]
Length = 512
Score = 76.1 bits (184), Expect = 2e-12
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 34/292 (11%)
Query: 669 NTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSN 728
N H L SD IY+ G++ + + +++ KL+D M+ T+++ T++
Sbjct: 185 NQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVK---KLEDAGA----MDYTIVVLATAS 237
Query: 729 MPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA- 787
+ + + Y+ ++ EYFRD G ++ D S+ A A R+IS L PG E YP
Sbjct: 238 EAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGD 297
Query: 788 --YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWA 845
YL S+L E R + + GS++ + + GD S + N + +
Sbjct: 298 VFYLHSRLLE------RAAKMSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIF 351
Query: 846 LDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKA--MELLQKESELQE 903
L++DL + PA+N S S A + KAM+ A ++L + +E
Sbjct: 352 LESDLFYKGIRPAVNVGISVSRVGSAA----------QIKAMKQVAGSVKLELAQFRERE 401
Query: 904 IVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRV 955
G D P + I R++ + L+QD + CP E+Q+ + V
Sbjct: 402 SFSQFGSDLDPATQAQIEHGKRLV--EILKQDQYHP----CPVEEQIVSIYV 447
>gi|11466784 ATPase alpha subunit [Oryza sativa] >gi|114521|sp|P12084|ATPA_ORYSA
ATP SYNTHASE ALPHA CHAIN >gi|67827|pir||PWRZA
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
rice chloroplast >gi|11979|emb|CAA33993.1| (X15901)
ATPase alpha subunit [Oryza sativa]
>gi|226696|prf||1603356X ATPase alpha [Oryza sativa]
Length = 507
Score = 75.7 bits (183), Expect = 2e-12
Identities = 81/298 (27%), Positives = 126/298 (42%), Gaps = 30/298 (10%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
+ +Y+ G+R + + V+ F + + ME T+++A ++ P + + YTG
Sbjct: 193 ICVYVAIGQRASSVAQVVTTFHE-------EGAMEYTIVVAEMADSPATLQYLAPYTGAA 245
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
+AEYF ++ D S+ A+A R++S L PG E YP YL S+L E
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE----- 300
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L S GS++ + V GD S + N + + L ADL PAIN
Sbjct: 301 -RAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAI 920
S S A + K V + K +EL Q +ELQ + AL + +
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSK------LELAQ-FAELQAFAQFA--SALDKTSQNQ 410
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAK 978
L R LRE Q A P E+Q+ + + Y ++E L+E+ K
Sbjct: 411 LARGRRLRELLKQSQA-----NPLPVEEQIATIYIGTRGYLDSLEIGQVKKFLDELRK 463
>sp|P12112|ATPA_WHEAT ATP SYNTHASE ALPHA CHAIN >gi|67828|pir||PWWTA H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - wheat chloroplast
>gi|552976|gb|AAA84725.1| (M16842) ATP synthase alpha
subunit [Triticum aestivum]
Length = 504
Score = 75.7 bits (183), Expect = 2e-12
Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 30/298 (10%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
+ +Y+ G+R + + V+ F + + ME T+++A ++ P + + YTG
Sbjct: 193 ICVYVAIGQRASSVAQVVTTFHE-------EGAMEYTIVVAEMADSPATLQYLAPYTGAA 245
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
+AEYF ++ D S+ A+A R++S L PG E YP YL S+L E
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE----- 300
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L S GS++ + V GD S + N + + L ADL PAIN
Sbjct: 301 -RAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAI 920
S S A + K V + K +EL Q +ELQ + AL + +
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSK------LELAQ-FAELQAFAQFA--SALDKTSQNQ 410
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAK 978
L R LRE Q A P E+Q+ + Y ++E L+E+ K
Sbjct: 411 LARGRRLRELLKQSQA-----NPLPVEEQIATIYTGTRGYLDSLEIEQVNKFLDELRK 463
>sp|Q58242|Y832_METJA HYPOTHETICAL PROTEIN MJ0832 >gi|2129243|pir||H64403
ribonucleoside-triphosphate reductase (EC 1.17.4.2),
anaerobic (intein-containing) - Methanococcus jannaschii
>gi|1591520|gb|AAB98834.1| (U67527) anaerobic
ribonucleoside-triphosphate reductase (nrdD)
[Methanococcus jannaschii]
Length = 1750
Score = 75.7 bits (183), Expect = 2e-12
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 44/320 (13%)
Query: 389 LDEKLAEFLGYLIADGTLKPRTVAIYNNDESLLRRANELANELFNIEGKI--VKG--RTV 444
LDEK +G +++G + V I + ++ + E+ E+ + VKG R
Sbjct: 1279 LDEKFGYLIGAFLSEGHWNDKCVEISSTNKEFIENLVEIIEEILGKDAYYITVKGDKRRY 1338
Query: 445 KALLIH--SKALVEFFSKLGVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDG--YY 500
K L + +K + F LG+ NK + ++P +L+S +K IK YI DG Y
Sbjct: 1339 KDLYVIGLNKTVAMIFESLGL--NKLSSNKEIPS-ILLSNETFLKGLIKGYIDGDGSIYV 1395
Query: 501 DENKGE--IEIVTASEEAAYGFSYLLAKLGI---YAIIREKIIGD--KVYYRVVISGESN 553
DE+K + I + T SE L LGI +I ++ + + + Y + I+G+ N
Sbjct: 1396 DESKRDYSIRLYTTSETLRDTLCLALKILGINYRLSIDKKSKVNENWRDCYVIKITGKEN 1455
Query: 554 LEKL-GIERVGRGYTSYDIVPVEVEELYNALGRPYAELK---RAGIEIHNYLSGENMSYE 609
+EKL +E G D++P ++ E + + Y++ + R GI+++N E++
Sbjct: 1456 IEKLLDVEIKNNG--GKDVIP-KIAEKFKEIINQYSQREWKERFGIDVNNLHIWEDLKKG 1512
Query: 610 MFRKF-AKFV-----GMEEIAENHL-----------THVLFDEIVEIRYISEGQE-VYDV 651
++ AK V ++EI E + +LF+ I IR + E E VYD+
Sbjct: 1513 YMSRYRAKKVLNIMKNVKEIEEKYGRLLDKIGQLIDNDLLFERIKSIRVLDEIPEYVYDI 1572
Query: 652 TTE-THNFIGGNMPTLLHNT 670
+ E T NFIGG LHNT
Sbjct: 1573 SVEGTENFIGGEGFICLHNT 1592
>sp|O50288|ATPA_RICPR ATP SYNTHASE ALPHA CHAIN >gi|7436072|pir||E71641 ATP synthase alpha
chain (atpA) RP803 - Rickettsia prowazekii
>gi|3861330|emb|CAA15229.1| (AJ235273) ATP SYNTHASE
ALPHA CHAIN (atpA) [Rickettsia prowazekii]
Length = 512
Score = 75.7 bits (183), Expect = 2e-12
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 34/292 (11%)
Query: 669 NTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSN 728
N H L SD IY+ G++ + + +++ KL+D M+ T+++ T++
Sbjct: 185 NQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVK---KLEDAGA----MDYTIVVLATAS 237
Query: 729 MPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA- 787
+ + + Y+ ++ EYFRD G ++ D S+ A A R+IS L PG E YP
Sbjct: 238 EAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGD 297
Query: 788 --YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWA 845
YL S+L E R + + GS++ + + GD S + N + +
Sbjct: 298 VFYLHSRLLE------RAAKMSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIF 351
Query: 846 LDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKA--MELLQKESELQE 903
L++DL + PA+N S S A + KAM+ A ++L + +E
Sbjct: 352 LESDLFYKGIRPAVNVGISVSRVGSAA----------QIKAMKQVAGSVKLELAQFRERE 401
Query: 904 IVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRV 955
G D P + I R++ + L+QD + CP E+Q+ + V
Sbjct: 402 SFSQFGSDLDPATKAQIEHGKRLV--EILKQDQYHP----CPVEEQIVSIYV 447
>sp|Q05372|ATPA_SYNP1 ATP SYNTHASE ALPHA CHAIN >gi|480492|pir||S36965 H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Synechococcus sp
>gi|49219|emb|CAA49875.1| (X70431) ATP synthase (alpha)
[Synechococcus sp.]
Length = 503
Score = 74.9 bits (181), Expect = 4e-12
Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 47/339 (13%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
+ +Y+ G++ + + V+ + + ++ T+++A ++ P A + + YTG +
Sbjct: 193 ICVYVAIGQKASSVAQVVNVLRE-------RGALDYTIVVAANASDPAALQYLAPYTGAS 245
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
IAEYF G ++ D S+ A+A R++S L PG E YP YL S+L E
Sbjct: 246 IAEYFMYQGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE----- 300
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L GS++ + V GD S + N + + L +DL PAIN
Sbjct: 301 -RAAKLNDALGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGLRPAIN 359
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMEL---LQKESELQEIVRIVGPDALPERE 917
S S A + KAM+ A +L L + ELQ + L +
Sbjct: 360 AGISVSRVGSAA----------QIKAMKQVAGKLKLELAQFDELQAFAQFASD--LDKAT 407
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIA 977
+ L + LRE L+Q + + P E QV + N Y +P+E +A
Sbjct: 408 QNQLARGQRLRE-ILKQPQYSPI----PVEYQVATIYAGTNGY-------LDDIPVEAVA 455
Query: 978 KL--PVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKK 1014
K +R+ + K P G+ K +E E L K+
Sbjct: 456 KFVAGLRDYLATSK--PQYGEAVRSSQKLDETAEALLKE 492
>sp|P20022|ATPB_METTL ATP SYNTHASE BETA CHAIN >gi|80952|pir||S05029 H+-transporting ATP
synthase (EC 3.6.1.34) beta chain - Methanococcus
thermolithotrophicus (fragment) >gi|226413|prf||1511093A
H ATPase regulatory subunit [Methanococcus
thermolithotrophicus]
Length = 253
Score = 74.5 bits (180), Expect = 5e-12
Identities = 58/184 (31%), Positives = 89/184 (47%), Gaps = 27/184 (14%)
Query: 658 FIGGNMPTLLHNTVTQHQLAKWSDAQ------VVIYIGCGERGNEMTDVLEEFPKLKDPK 711
F G +P HNT+ Q+A+ + + V++ G E +EEF K
Sbjct: 87 FSGSGLP---HNTLAA-QIARQAKVRGEGEQFAVVFAAMGITNEEANYFMEEFKK----- 137
Query: 712 TGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYF---RDMGYDVALMADSTSRWAEA 768
+E V+ N +N P R + +T AEY +DM + + ++ D T+ + EA
Sbjct: 138 --PGALENAVVFINLANDPAIERIITPRLALTTAEYLAYEKDM-HVLVVLTDMTN-YCEA 193
Query: 769 LREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDF 828
LREI+ E+PG GYP Y+ + LA YERAGRV R G+V+ I ++ P D
Sbjct: 194 LREIAAARNEVPGRRGYPGYMYTDLATLYERAGRV-----KGRKGTVTQIPILTMPHDDI 248
Query: 829 SEPV 832
+ P+
Sbjct: 249 THPI 252
>gi|11465708 ATP synthase CF1 alpha chain [Porphyra purpurea]
>gi|1703661|sp|P51242|ATPA_PORPU ATP SYNTHASE ALPHA CHAIN
>gi|2147444|pir||S73163 H+-transporting ATP synthase (EC
3.6.1.34) alpha chain - red alga (Porphyra purpurea)
chloroplast >gi|1276708|gb|AAC08128.1| (U38804) ATP
synthase CF1 alpha chain [Porphyra purpurea]
Length = 504
Score = 74.5 bits (180), Expect = 5e-12
Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 43/337 (12%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
V +Y+ G++ + + V+ + K ++ T+++ ++ P + + YTG
Sbjct: 193 VCVYVAIGQKASSVAQVVSSLQE-------KGALDYTIIVTANADSPATLQYIAPYTGAA 245
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
+AEYF G ++ D ++ A+A R++S L PG E YP YL S+L E
Sbjct: 246 LAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE----- 300
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L SD GS++ + + GD S + N + + L DL PAIN
Sbjct: 301 -RAAKLNSDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAIN 359
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMEL---LQKESELQEIVRIVGPDALPERE 917
S S A + KAM+ A +L L + +EL+ + L +
Sbjct: 360 VGISVSRVGSAA----------QIKAMKQVAGKLKLELAQFAELEAFSQFASD--LDKAT 407
Query: 918 RAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIA 977
+ L + LRE Q ++ P E+Q ++ +N Y ++ I+ + I
Sbjct: 408 QNQLARGQRLREILKQAQ-----NSPIPVEEQTAIIYTGINGY---LDDIAVNKVPDFII 459
Query: 978 KLPVREEIGRMKFEPDVGKIKALIDKTNEQFEELFKK 1014
KL RE++ K P+ G+ K + EEL KK
Sbjct: 460 KL--REDLKNSK--PEFGESIRSSKKLDTASEELLKK 492
>emb|CAB95752.1| (AJ247127) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 74.5 bits (180), Expect = 5e-12
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD K ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHE---MKDSK----VLDKVA 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 48 LVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ ER + + GS++ + AV P D ++P
Sbjct: 108 AVGYQPTLAEEMGLLQERI-------TSTKEGSITSVQAVYVPADDLTDP 150
>sp|P27179|ATPA_SYNY3 ATP SYNTHASE ALPHA CHAIN >gi|67817|pir||PWYBA H+-transporting ATP
synthase (EC 3.6.1.34) alpha chain - Synechocystis sp.
(strain PCC 6803) >gi|47513|emb|CAA41135.1| (X58128)
ATPase subunit alpha [Synechocystis PCC6803]
>gi|1651808|dbj|BAA16735.1| (D90900) ATP synthase a
subunit [Synechocystis sp.]
Length = 503
Score = 74.1 bits (179), Expect = 7e-12
Identities = 82/346 (23%), Positives = 147/346 (41%), Gaps = 47/346 (13%)
Query: 680 SDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIY 739
S+ + +Y+ G++ + + ++ D T K M T+++A +N P + + Y
Sbjct: 189 SEDVICVYVAIGQKASTVAQII-------DTLTEKGAMAYTIVVAANANDPATLQYLAPY 241
Query: 740 TGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEF 796
TG T+AE+F G ++ D S+ A+A R++S + PG E YP Y+ S+L E
Sbjct: 242 TGATLAEHFMYQGKSTLVIYDDLSKQAQAYRQMSLLMRRPPGREAYPGDVFYIHSRLLE- 300
Query: 797 YERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHF 856
R L GS++ + + GD S + N + + L DL
Sbjct: 301 -----RAAKLSDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFR 355
Query: 857 PAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMEL---LQKESELQEIVRIVGPDAL 913
PAIN S S A + KAM+ A +L L + +EL+ + L
Sbjct: 356 PAINAGISVSRVGSAA----------QTKAMKKVAGKLKLELAQFAELEAFSQFASD--L 403
Query: 914 PERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPL 973
+A L + LR+ L+Q + + +QV + LN Y T +P+
Sbjct: 404 DAATQAQLARGQRLRQ-LLKQPENSPLSVW----EQVAISYAGLNGYIDT-------IPV 451
Query: 974 EEIAKLP--VRE--EIGRMKFEPDVGKIKALIDKTNEQFEELFKKY 1015
+++ + +R+ + + K+ + KAL D+ +E K++
Sbjct: 452 DKVTEFAQGLRDYLKANKAKYVEIINSSKALTDEAETLLKEGIKEF 497
>pir||S37647 H+-transporting ATP synthase (EC 3.6.1.34) beta chain - Buchnera
aphidicola (fragment) >gi|312026|emb|CAA78853.1|
(Z15147) Beta subunit of ATPase [Buchnera aphidicola]
>gi|8977790|emb|CAB95753.1| (AJ247128) putative ATP
synthetase beta-subunit [Buchnera aphidicola]
Length = 151
Score = 73.7 bits (178), Expect = 9e-12
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E +KD K ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHE---MKDSK----VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 48 LVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ ER + + GS++ + AV P D ++P
Sbjct: 108 AVGYQPTLAGEMGLLQERI-------TSTKEGSITSVQAVYVPADDLTDP 150
>emb|CAB95755.1| (AJ247130) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 73.0 bits (176), Expect = 2e-11
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E K ++++
Sbjct: 2 NMMELIRNIALEH-------SGYSVFTGVGERTREGNDFYHEMKASK-------VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R + +TG+TIAE FRD+G DV L D+ R+ A E+S L +P
Sbjct: 48 LVYGQMNEPPGNRLRAAFTGLTIAEKFRDIGKDVLLFIDNIYRYTLAGTEVSALLGRIPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ ER + + GS++ I AV P D ++P
Sbjct: 108 AVGYQPTLAEEMGLLQERI-------TSTKKGSITSIQAVYVPADDLTDP 150
>pir||D71480 probable flagellum-specific ATP synthase - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3329173|gb|AAC68312.1|
(AE001342) Flagellum-specific ATP Synthase [Chlamydia
trachomatis]
Length = 434
Score = 72.2 bits (174), Expect = 3e-11
Identities = 57/160 (35%), Positives = 79/160 (48%), Gaps = 18/160 (11%)
Query: 642 ISEGQEVYDVTTETHNFIGGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVL 701
I EGQ V + +E GG +LL +AK S + + GERG E+ D +
Sbjct: 154 IGEGQRV-GIFSEP----GGGKSSLLST------IAKGSQQTINVIALIGERGREVRDYV 202
Query: 702 EEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADS 761
+ K G +RTV+IA+T+ A++ + ITIAEYFRD G V DS
Sbjct: 203 NQH------KEGLAA-QRTVIIASTAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDS 255
Query: 762 TSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAG 801
SRW E+L+E++ E Y A + +AEF ERAG
Sbjct: 256 LSRWIESLQEVAIARGETLSTHHYAASVFHHVAEFLERAG 295
>sp|P05493|ATP0_PEA ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL >gi|541972|pir||JN0769
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
garden pea mitochondrion >gi|13381|emb|CAA28964.1|
(X05366) alpha-subunit (AA1-507) [Pisum sativum]
>gi|286140|dbj|BAA03524.1| (D14698) F1 ATPase alpha
subunit [Pisum sativum]
Length = 507
Score = 71.8 bits (173), Expect = 4e-11
Identities = 82/350 (23%), Positives = 147/350 (41%), Gaps = 58/350 (16%)
Query: 665 TLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIA 724
T+L+ + S+ +Y+ G++ + + +++ + +E ++L+A
Sbjct: 184 TILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN-------ALEYSILVA 236
Query: 725 NTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
T++ P + + Y+G + EYFRD G ++ D S+ A A R++S L PG E
Sbjct: 237 ATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 296
Query: 785 YPA---YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
+P YL S+L E R GS++ + + GD S + N + +
Sbjct: 297 FPGDVFYLHSRLLE------RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITD 350
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L+ +L R PAIN S S A + KAM+ L + ++
Sbjct: 351 GQICLETELFYRGIRPAINVGLSVSRVGSAA----------QLKAMKQVCGSLKLELAQY 400
Query: 902 QEIVRIV--GPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLN- 958
+E+ G D L +A+L L E L+Q + + P EKQ+ ++ +N
Sbjct: 401 REVAAFAQFGSD-LDAATQALLNRGARLTE-VLKQPQYAPL----PIEKQILVIYAAVNG 454
Query: 959 FYDKTMEAISRGVPLEEIAKL------PVREEI---------GRMKFEPD 993
F D+ +PL++IA+ +++E+ G K EPD
Sbjct: 455 FCDR--------MPLDKIAQYERDILSTIKQELLQSLKGGLTGERKIEPD 496
>pir||A26760 H+-transporting ATP synthase (EC 3.6.1.34) alpha chain - garden pea
mitochondrion >gi|357982|prf||1305286A ATPase alpha,F1
[Arachis hypogaea]
Length = 507
Score = 71.8 bits (173), Expect = 4e-11
Identities = 82/350 (23%), Positives = 147/350 (41%), Gaps = 58/350 (16%)
Query: 665 TLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIA 724
T+L+ + S+ +Y+ G++ + + +++ + +E ++L+A
Sbjct: 184 TILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN-------ALEYSILVA 236
Query: 725 NTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
T++ P + + Y+G + EYFRD G ++ D S+ A A R++S L PG E
Sbjct: 237 ATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 296
Query: 785 YPA---YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
+P YL S+L E R GS++ + + GD S + N + +
Sbjct: 297 FPGDVFYLHSRLLE------RAAKWSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITD 350
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L+ +L R PAIN S S A + KAM+ L + ++
Sbjct: 351 GQICLETELFYRGIRPAINVGLSVSRVGSAA----------QLKAMKQVCGSLKLELAQY 400
Query: 902 QEIVRIV--GPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLN- 958
+E+ G D L +A+L L E L+Q + + P EKQ+ ++ +N
Sbjct: 401 REVAAFAQFGSD-LDAATQALLNRGARLTE-VLKQPQYAPL----PIEKQILVIYAAVNG 454
Query: 959 FYDKTMEAISRGVPLEEIAKL------PVREEI---------GRMKFEPD 993
F D+ +PL++IA+ +++E+ G K EPD
Sbjct: 455 FCDR--------MPLDKIAQYERDILSTIKQELLQSLKGGLTGERKIEPD 496
>dbj|BAA00131.1| (D00193) F1 ATPase alpha-subunit type 4 [Pisum sativum]
Length = 507
Score = 71.8 bits (173), Expect = 4e-11
Identities = 82/350 (23%), Positives = 147/350 (41%), Gaps = 58/350 (16%)
Query: 665 TLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIA 724
T+L+ + S+ +Y+ G++ + + +++ + +E ++L+A
Sbjct: 184 TILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN-------ALEYSILVA 236
Query: 725 NTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEG 784
T++ P + + Y+G + EYFRD G ++ D S+ A A R++S L PG E
Sbjct: 237 ATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 296
Query: 785 YPA---YLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVK 841
+P YL S+L E R GS++ + + GD S + N + +
Sbjct: 297 FPGDVFYLHSRLLE------RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITD 350
Query: 842 VFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESEL 901
L+ +L R PAIN S S A + KAM+ L + ++
Sbjct: 351 GQICLETELFYRGIRPAINVGLSVSRVGSAA----------QLKAMKQVCGSLKLELAQY 400
Query: 902 QEIVRIV--GPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLN- 958
+E+ G D L +A+L L E L+Q + + P EKQ+ ++ +N
Sbjct: 401 REVAAFAQFGSD-LDAATQALLNRGARLTE-VLKQPQYAPL----PIEKQILVIYAAVNG 454
Query: 959 FYDKTMEAISRGVPLEEIAKL------PVREEI---------GRMKFEPD 993
F D+ +PL++IA+ +++E+ G K EPD
Sbjct: 455 FCDR--------MPLDKIAQYERDILSTIKQELLQSLKAGLTGERKIEPD 496
>emb|CAB95750.1| (AJ247125) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 71.8 bits (173), Expect = 4e-11
Identities = 52/170 (30%), Positives = 77/170 (44%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E + D K ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHE---MNDSK----VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 48 LVYGQMNEPPGNRLRVAFTGLTIAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ ER + + GS++ + AV P D ++P
Sbjct: 108 AVGYQPTLAEEMGLLQERI-------TSTKKGSITSVQAVYVPADDLTDP 150
>emb|CAB95762.1| (AJ247137) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 71.8 bits (173), Expect = 4e-11
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + +++G GER E D E KT K ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFVGVGERTREGNDFYHEM------KTSK-VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+TIAE FRD G+DV L D+ R+ A E+S L +P
Sbjct: 48 LVYGQMNEPPGNRLRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRIPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY L+ ++ ER + + GS++ I A+ P D ++P
Sbjct: 108 AVGYQPTLSEEMGMLQERI-------TSTKNGSITSIQAIYVPADDLTDP 150
>emb|CAB95761.1| (AJ247136) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 71.4 bits (172), Expect = 5e-11
Identities = 52/170 (30%), Positives = 77/170 (44%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N QH + ++ G GER E D E KT K ++++
Sbjct: 2 NMMELIRNIAVQH-------SGYSVFTGVGERTREGNDFYYEM------KTSK-VLDKVA 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
LI N P R +TG+T++E FRD G DV L D+ R+ A E+S L +P
Sbjct: 48 LIYGQMNEPPGNRLRVAFTGLTVSEKFRDSGKDVLLFIDNIYRYVLAGTEVSALLGRIPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY L+ ++ ER + + GS++ I AV P D ++P
Sbjct: 108 AVGYQPTLSEEMGILQERI-------TSTKKGSITSIQAVYVPADDLTDP 150
>emb|CAB95751.1| (AJ247126) putative ATP synthetase beta-subunit [Buchnera
aphidicola]
Length = 151
Score = 71.0 bits (171), Expect = 6e-11
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E + ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHEMKESN-------VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
LI N P R + +TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 48 LIYGQMNEPPGNRLRAAFTGLTIAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ GR+ + + GS++ + AV P D ++P
Sbjct: 108 AVGYQPTLAGEMGLL---QGRITST----KTGSITSVQAVYVPADDLTDP 150
>emb|CAB95764.1| (AJ247139) putative ATP synthetase beta-subunit [secondary
endosymbiont of Chaitophorus leucomelas]
Length = 151
Score = 71.0 bits (171), Expect = 6e-11
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 662 NMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTV 721
NM L+ N +H + ++ G GER E D E + ++++
Sbjct: 2 NMMELIRNIAIEH-------SGYSVFTGVGERTREGNDFYHEMKESN-------VLDKVS 47
Query: 722 LIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPG 781
L+ N P R TG+TIAE FRD G DV L D+ R+ A E+S L MP
Sbjct: 48 LVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPS 107
Query: 782 EEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEP 831
GY LA ++ ER + + GS++ I AV P D ++P
Sbjct: 108 AVGYQPTLAGEMGTLQERI-------TSTKTGSITSIQAVYVPADDLTDP 150
>gi|11467189 ATPase alpha subunit [Zea mays] >gi|114518|sp|P05022|ATPA_MAIZE ATP
SYNTHASE ALPHA CHAIN >gi|279574|pir||PWZMA
H+-transporting ATP synthase (EC 3.6.1.34) alpha chain -
maize chloroplast >gi|12403|emb|CAA28876.1| (X05255)
CF(1) alpha subunit (AA 1-507) [Zea mays]
>gi|552733|gb|AAA84474.1| (M27557) phosphorylation
coupling factor proteolipid subunit (atpH) [Zea mays]
>gi|902219|emb|CAA60283.1| (X86563) ATPase alpha subunit
[Zea mays]
Length = 507
Score = 70.6 bits (170), Expect = 8e-11
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 30/298 (10%)
Query: 684 VVIYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGIT 743
+ +Y+ G+R + + V+ F + + ME T+++A ++ P + + YTG
Sbjct: 193 ICVYVAIGQRASSVAQVVTTFHE-------EGAMEYTIVVAEMADSPATLQYLAPYTGAA 245
Query: 744 IAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPA---YLASKLAEFYERA 800
+AEYF ++ D S+ A+A R++S L PG E Y YL S+L E
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYLGDVFYLHSRLLE----- 300
Query: 801 GRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAIN 860
R L S GS++ + V GD S + N + + L ADL PAIN
Sbjct: 301 -RAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359
Query: 861 WLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAI 920
S S A + K V + K +EL Q +ELQ + AL + +
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSK------LELAQ-FAELQAFAQFA--SALDKTSQNQ 410
Query: 921 LLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPLEEIAK 978
L R LRE L+Q + + P E+QV + Y ++E L+E+ K
Sbjct: 411 LARGRRLRE-LLKQSQSNPL----PVEEQVATIYTGTRGYLDSLEIEQVKKFLDELRK 463
>pir||D81743 virulence ATPase, probable TC0090 [imported] - Chlamydia muridarum
(strain Nigg) >gi|7190124|gb|AAF38970.1| (AE002276)
virulence ATPase, putative [Chlamydia muridarum]
Length = 434
Score = 70.6 bits (170), Expect = 8e-11
Identities = 53/160 (33%), Positives = 80/160 (49%), Gaps = 18/160 (11%)
Query: 642 ISEGQEVYDVTTETHNFIGGNMPTLLHNTVTQHQLAKWSDAQVVIYIGCGERGNEMTDVL 701
I EGQ V + +E GG +LL +AK S + + GERG E+ D +
Sbjct: 154 IGEGQRV-GIFSEP----GGGKSSLLST------IAKGSQQTINVIALIGERGREVRDYV 202
Query: 702 EEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADS 761
+ K G +RT+++ +T++ A++ + ITIAEYFRD G V + DS
Sbjct: 203 NQH------KEGLAA-QRTIIVVSTAHETAASKVIAGRAAITIAEYFRDQGARVLFIMDS 255
Query: 762 TSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAG 801
SRW E+L+E++ E Y A + ++EF ERAG
Sbjct: 256 LSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAG 295
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.139 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 389177503
Number of Sequences: 2977
Number of extensions: 17769695
Number of successful extensions: 51146
Number of sequences better than 1.0e-10: 1182
Number of HSP's better than 0.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 1090
Number of HSP's that attempted gapping in prelim test: 46579
Number of HSP's gapped (non-prelim): 3171
length of query: 1017
length of database: 189,106,746
effective HSP length: 59
effective length of query: 958
effective length of database: 153,796,013
effective search space: 147336580454
effective search space used: 147336580454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 170 (70.6 bits)