BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2379 (atpD) DE:H+-transporting ATP synthase, subunit D
(atpD)
(214 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75028 h+-transporting ATP synthase, chain D (atpd) PAB2379... 408 e-113
pir||D71213 probable H(+)-transporting ATP synthase subunit D - ... 394 e-109
pir||T44676 H+-transporting ATP synthase, chain D [imported] - D... 317 8e-86
sp|Q58032|ATPD_METJA ATP SYNTHASE, SUBUNIT D >gi|2127951|pir||G6... 222 3e-57
pir||E69227 H+-transporting ATP synthase (EC 3.6.1.34) chain D -... 203 1e-51
sp|Q60188|ATPD_METMA ATP SYNTHASE, SUBUNIT D >gi|11267054|pir||T... 181 6e-45
gi|11498768 H+-transporting ATP synthase, subunit D (atpD) [Arch... 175 4e-43
gb|AAG20273.1| (AE005102) H+-transporting ATP synthase subunit D... 161 5e-39
dbj|BAA33198.1| (D63799) vacuolar type ATP synthase subunit [The... 138 5e-32
emb|CAC11155.1| (AL445063) vacuolar proton-ATPase subunit D rela... 136 1e-31
pir||C75485 v-type ATP synthase, D subunit - Deinococcus radiodu... 129 3e-29
sp|P43435|NTPD_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT D (NA(+)... 128 6e-29
gb|AAK40881.1| ATP synthase subunit D (atpD) [Sulfolobus solfata... 110 1e-23
emb|CAB57734.1| (Y18930) atpase gamma chain membrane-associated ... 110 1e-23
sp|O59823|VATD_SCHPO VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D... 109 2e-23
sp|P34462|VATD_CAEEL PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT D (V... 108 7e-23
emb|CAC17412.1| (AJ297976) vacuolar proton pump protein [Suberit... 103 1e-21
sp|P87220|VATD_CANAL VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D... 102 3e-21
sp|O59941|VATD_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D... 101 5e-21
gb|AAD10366.1| (U45447) vacuolar proton-ATPase subunit D [Orycto... 101 9e-21
sp|P22721|ATPD_SULAC MEMBRANE-ASSOCIATED ATPASE GAMMA CHAIN (SUL... 100 1e-20
gi|7706757 vacuolar proton pump delta polypeptide [Homo sapiens]... 100 1e-20
gb|AAD40384.1| (AF100741) vacuolar H-ATPase subunit D [Homo sapi... 100 1e-20
emb|CAB46439.1| (AJ225059) v-ATPase subunit D [Arabidopsis thali... 100 1e-20
emb|CAB65912.1| (AJ251992) vacuolar ATPase subunit D [Manduca se... 100 1e-20
gb|AAG30225.1| (AF298810) vacuolar ATPase subunit D [Mus musculus] 100 1e-20
emb|CAB72289.1| (AL138972) /prediction=(method:""genefinder"", v... 100 2e-20
pir||T49156 v-ATPase subunit D (vATPD) - Arabidopsis thaliana >g... 100 2e-20
pir||B72733 probable membrane-associated ATPase gamma chain APE0... 99 4e-20
gb|AAF58126.1| (AE003810) CG8186 gene product [Drosophila melano... 99 4e-20
sp|P39942|VATD_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D... 99 5e-20
gb|AAG22401.1| (AE003424) EG:BACR25B3.4 gene product [Drosophila... 97 2e-19
pir||A71313 probable V-type ATPase, subunit D (atpD-2) - syphili... 94 1e-18
gi|6320784 vacuolar ATPase V1 domain subunit D; Vma8p [Saccharom... 93 2e-18
gb|AAA72941.1| (M57238) ATPase gamma-subunit [Sulfolobus acidoca... 78 1e-13
gb|AAF58545.1| (AE003823) CG13167 gene product [Drosophila melan... 77 1e-13
>pir||B75028 h+-transporting ATP synthase, chain D (atpd) PAB2379 - Pyrococcus
abyssi (strain Orsay) >gi|5459178|emb|CAB50664.1|
(AJ248288) H+-transporting ATP synthase, subunit D
(atpD) [Pyrococcus abyssi]
Length = 214
Score = 408 bits (1038), Expect = e-113
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKM 60
MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKM
Sbjct: 1 MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKM 60
Query: 61 EEAFEALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRG 120
EEAFEALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRG
Sbjct: 61 EEAFEALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRG 120
Query: 121 YAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK 180
YAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK
Sbjct: 121 YAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK 180
Query: 181 NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM 214
NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM
Sbjct: 181 NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM 214
>pir||D71213 probable H(+)-transporting ATP synthase subunit D - Pyrococcus
horikoshii >gi|3258416|dbj|BAA31099.1| (AP000007) 214aa
long hypothetical H(+)-transporting ATP synthase subunit
D [Pyrococcus horikoshii]
Length = 214
Score = 394 bits (1002), Expect = e-109
Identities = 203/214 (94%), Positives = 213/214 (98%)
Query: 1 MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKM 60
MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELI+KM
Sbjct: 1 MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIRKM 60
Query: 61 EEAFEALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRG 120
EEAF +LRRAQVDVG+LRLKEI+IGVKPN+EIEI+TRNIMGVRVPLIEVPELKRKAS+RG
Sbjct: 61 EEAFNSLRRAQVDVGALRLKEIAIGVKPNKEIEIKTRNIMGVRVPLIEVPELKRKASERG 120
Query: 121 YAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK 180
YAF+STTSTVD+AAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRM+
Sbjct: 121 YAFVSTTSTVDMAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRME 180
Query: 181 NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM 214
NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM
Sbjct: 181 NTIKFIEQHLDEMERENFFRLKRVKAILEARQSM 214
>pir||T44676 H+-transporting ATP synthase, chain D [imported] - Desulfurococcus
sp. (strain SY) >gi|2104728|gb|AAB64418.1| (U96487)
V-ATPase D subunit [Desulfurococcus sp. SY]
Length = 214
Score = 317 bits (803), Expect = 8e-86
Identities = 156/211 (73%), Positives = 187/211 (87%)
Query: 1 MPEILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKM 60
M E+L +KPTRMELL LKRR++LA++GHKLLK+KQDAL+MEFFTIYDEAL LRREL KM
Sbjct: 1 MAELLNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALVMEFFTIYDEALQLRRELNLKM 60
Query: 61 EEAFEALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRG 120
+EAFEAL+ A++DVG+LRLKEIS+ VKPN E+EIR RN+M V VPLIE KR A +RG
Sbjct: 61 KEAFEALQMAEIDVGTLRLKEISLSVKPNREVEIRKRNVMAVPVPLIEAESFKRNAGERG 120
Query: 121 YAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMK 180
YAF+S+++ VD+ AEKFEEVL+LA+RLAEVEE+LKRL +EIE TKRRVNALEYIIIPRM+
Sbjct: 121 YAFVSSSAKVDLVAEKFEEVLDLAVRLAEVEETLKRLAREIEVTKRRVNALEYIIIPRME 180
Query: 181 NTIKFIEQHLDEMERENFFRLKRVKAILEAR 211
T+KFI+Q LDEMERENFFRLKRVKA++EAR
Sbjct: 181 ATVKFIKQRLDEMERENFFRLKRVKALIEAR 211
>sp|Q58032|ATPD_METJA ATP SYNTHASE, SUBUNIT D >gi|2127951|pir||G64376 H+-transporting ATP
synthase (EC 3.6.1.34) chain D - Methanococcus
jannaschii >gi|1592298|gb|AAB98610.1| (U67510)
H+-transporting ATP synthase, subunit D (atpD)
[Methanococcus jannaschii]
Length = 216
Score = 222 bits (559), Expect = 3e-57
Identities = 112/209 (53%), Positives = 157/209 (74%), Gaps = 1/209 (0%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
++ PTRMELLKLK ++KLAE+GHKLLK+K+DALIMEFF I ++A LR ++ K+ EA++
Sbjct: 3 RVNPTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEAYK 62
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNE-EIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
L AQ +G+L +KE ++ K ++ E+++ T+NIMGV VP E+ ++RK +RGY+
Sbjct: 63 DLIMAQTVMGTLAVKEAALAAKNDKLEVDMDTKNIMGVTVPTFEIYNVRRKVGERGYSPY 122
Query: 125 STTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIK 184
+S +D AA+KFEE LEL LAE+E S+K L +EI TKRRVNALEY+IIPR+K+ K
Sbjct: 123 GVSSKLDEAAKKFEEALELITELAEIETSIKLLAEEIITTKRRVNALEYVIIPRLKSLKK 182
Query: 185 FIEQHLDEMERENFFRLKRVKAILEARQS 213
+I LDEMERENFFRLK +K+ +E R++
Sbjct: 183 YISMRLDEMERENFFRLKLIKSRIEKREA 211
>pir||E69227 H+-transporting ATP synthase (EC 3.6.1.34) chain D -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622050|gb|AAB85449.1| (AE000869) ATP synthase,
subunit D [Methanobacterium thermoautotrophicum]
Length = 213
Score = 203 bits (512), Expect = 1e-51
Identities = 103/203 (50%), Positives = 145/203 (70%)
Query: 7 IKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEA 66
I PTRMELLKLK+R KLA +G+ LLKEK++ALIMEFF I + R ++ + ++EAF
Sbjct: 9 INPTRMELLKLKQREKLAVKGYSLLKEKRNALIMEFFNILERVKGSREKVEEHLKEAFSD 68
Query: 67 LRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIST 126
L AQV +G ++ ++ V+ + E++I +R+IMGV VP+++ +R +RGY + T
Sbjct: 69 LTEAQVLMGDTAVERAAMSVRESVEVDIDSRSIMGVVVPVVDARATQRTVVERGYGLVDT 128
Query: 127 TSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFI 186
+ +D AA KFEE L L I L E+E++++ L EIE TKRRVNALE+IIIPR+KNT+K+I
Sbjct: 129 SVKLDEAARKFEESLALIIELGEIEKTIRLLAGEIESTKRRVNALEHIIIPRLKNTVKYI 188
Query: 187 EQHLDEMERENFFRLKRVKAILE 209
E L+EMERENF RLK +K +E
Sbjct: 189 EMRLEEMERENFVRLKMIKKSME 211
>sp|Q60188|ATPD_METMA ATP SYNTHASE, SUBUNIT D >gi|11267054|pir||T45109 H+-transporting
ATP synthase (EC 3.6.1.34) chain D [imported] -
Methanosarcina mazei >gi|1199640|gb|AAC06377.1| (U47274)
A1AO H+ ATPase, subunit D [Methanosarcina mazei]
Length = 209
Score = 181 bits (454), Expect = 6e-45
Identities = 94/200 (47%), Positives = 135/200 (67%)
Query: 7 IKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEA 66
+KPTR EL+ LK+++KL+E GHKLLK K+D LI+EFF I +EA ++R EL ++ E
Sbjct: 6 VKPTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAFAKSTEK 65
Query: 67 LRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIST 126
+ A G + ++ + K + EI++ NIMGV VP I +++ +RGY I T
Sbjct: 66 INLASAVNGMVAVRSTAFTAKESPEIQLSGHNIMGVVVPKISSTGVRKSLYERGYGIIGT 125
Query: 127 TSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFI 186
S +D A+ +E+++E I AE+E ++KRL EIEKTKRRVNALE+ +IP + +T+K+I
Sbjct: 126 NSYIDETADAYEDLVEKIITAAELETTMKRLLDEIEKTKRRVNALEFKVIPELIDTMKYI 185
Query: 187 EQHLDEMERENFFRLKRVKA 206
L+EMEREN FRLKRVKA
Sbjct: 186 RFMLEEMERENTFRLKRVKA 205
>gi|11498768 H+-transporting ATP synthase, subunit D (atpD) [Archaeoglobus
fulgidus] >gi|7428295|pir||G69395 H+-transporting ATP
synthase (EC 3.6.1.34) chain D - Archaeoglobus fulgidus
>gi|2649414|gb|AAB90072.1| (AE001023) H+-transporting
ATP synthase, subunit D (atpD) [Archaeoglobus fulgidus]
Length = 209
Score = 175 bits (439), Expect = 4e-43
Identities = 89/201 (44%), Positives = 141/201 (69%), Gaps = 1/201 (0%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
+++PTRMEL+KL+RR+K+A RGH LLK K+D LIMEF + +EA + +++K E+A
Sbjct: 3 EVQPTRMELIKLRRRIKMATRGHALLKMKRDGLIMEFRQLLEEAKEVIGGMVQKYEKAQS 62
Query: 66 ALRRAQVDVGSLRLKEISIGV-KPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
L A G + ++ I++ + E ++ +NIMGV VP+I+ +++K ++RGY +
Sbjct: 63 KLALAIAVDGIVAVRSIALSCCQIPPEFSMKRKNIMGVVVPVIKREPIRKKPTERGYGIL 122
Query: 125 STTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIK 184
ST++ VD A E +EE+++ + +AE+E +L++L +EIE+TKRRVNALEY +IP M+ K
Sbjct: 123 STSTRVDEAVEAYEELVDAVLEVAEIETTLRKLIEEIERTKRRVNALEYRVIPTMEELAK 182
Query: 185 FIEQHLDEMERENFFRLKRVK 205
FI L+EM+REN RLK++K
Sbjct: 183 FISFKLEEMDRENIIRLKKLK 203
>gb|AAG20273.1| (AE005102) H+-transporting ATP synthase subunit D; AtpD
[Halobacterium sp. NRC-1]
Length = 224
Score = 161 bits (404), Expect = 5e-39
Identities = 83/206 (40%), Positives = 132/206 (63%)
Query: 7 IKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEA 66
IKPTR L++++ R+ L+ERGH L++K+D LIMEF I D++ +R L E A +
Sbjct: 5 IKPTRKNLMEIEDRIDLSERGHDTLEQKRDGLIMEFMDILDQSQDVRSGLEGDYETAQQK 64
Query: 67 LRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIST 126
+ A+ G + + + ++ EI + + NIMGV VP IE ++K+ RGY + T
Sbjct: 65 INMARAMEGDVAVSGAAAALEEYPEITVESMNIMGVVVPQIESTKVKKSFDKRGYGILGT 124
Query: 127 TSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFI 186
++ +D AA+ +EE+LE + AEVE ++K++ EIE TKRRVNALE+ ++P + ++I
Sbjct: 125 SARIDEAADAYEELLESIVLAAEVETAMKKMLTEIETTKRRVNALEFKLLPELHEGKEYI 184
Query: 187 EQHLDEMERENFFRLKRVKAILEARQ 212
+Q L+E ERE FR+K+VK EA++
Sbjct: 185 DQKLEEKEREEMFRMKKVKDKKEAQE 210
>dbj|BAA33198.1| (D63799) vacuolar type ATP synthase subunit [Thermus thermophilus]
Length = 215
Score = 138 bits (344), Expect = 5e-32
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 10/205 (4%)
Query: 12 MELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEALRRAQ 71
M LL+ + +++LA++G LLK+K+DAL+ EFF + EA+ R+ L + +EA+ AL AQ
Sbjct: 1 MNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAALLLAQ 60
Query: 72 VDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFISTTSTVD 131
G + ++GV P E +E N+ G +VP + KA+ A +S T
Sbjct: 61 AFDGPEVVAGAALGVPPLEGVEAEVENVWGSKVPRL-------KATFPDGALLSPVGTPA 113
Query: 132 V---AAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFIEQ 188
A+ F E IR+A E LK++G+EI+KT RRVNALE ++IP ++ I+FI+Q
Sbjct: 114 YTLEASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVIPGIRAQIRFIQQ 173
Query: 189 HLDEMERENFFRLKRVKAILEARQS 213
L++ ERE+ FRLKR+K +EAR++
Sbjct: 174 VLEQREREDTFRLKRIKGKIEAREA 198
>emb|CAC11155.1| (AL445063) vacuolar proton-ATPase subunit D related protein
[Thermoplasma acidophilum]
Length = 213
Score = 136 bits (340), Expect = 1e-31
Identities = 79/206 (38%), Positives = 124/206 (59%), Gaps = 2/206 (0%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
+ I+PTR+EL++ +RR++LA++G LLK K+ ALI EF I ++ L K++ EA
Sbjct: 7 MDIRPTRIELIRTRRRIRLAKKGLDLLKMKRSALIYEFLQISRTIRGMKENLRKEVVEAL 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
++ A V GSL L+ I+ + + I + +RN+MGV +P +EV SD Y +
Sbjct: 67 NIIKVASVLEGSLALERIA-NMSSDSRINVNSRNVMGVNIPTLEVSYNLSILSDV-YRTV 124
Query: 125 STTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIK 184
S +D + +F+++ I + E E SL+ L EI++TKRR NA+E I+IPR++ K
Sbjct: 125 SVPVAIDDSIRRFQKLFYDLILIVEKENSLRNLLMEIDRTKRRSNAIENILIPRLEYQAK 184
Query: 185 FIEQHLDEMERENFFRLKRVKAILEA 210
I+ LDE ER+ F LK +K +EA
Sbjct: 185 MIKMTLDERERDTFTTLKTIKKKIEA 210
>pir||C75485 v-type ATP synthase, D subunit - Deinococcus radiodurans (strain
R1) >gi|6458410|gb|AAF10282.1|AE001927_1 (AE001927)
v-type ATP synthase, D subunit [Deinococcus radiodurans]
Length = 224
Score = 129 bits (320), Expect = 3e-29
Identities = 74/206 (35%), Positives = 122/206 (58%), Gaps = 3/206 (1%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
+I PTR LL K +K A G LLK K+DALI EFF + +AL+ R +L + A+
Sbjct: 4 QISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLSSVSKGAYT 63
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIS 125
+L A+ ++ +S+ + ++++ +I GV+VP I +PE +A+ ++ I+
Sbjct: 64 SLFGAKAWDSPEAVESLSLAGTGDYAVDMQIESIYGVKVPKINIPE---RAAQADFSPIN 120
Query: 126 TTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKF 185
+ A+ F VLE +++A E L+R+G+EI+KT RRVNALE ++IP + + I+F
Sbjct: 121 VGARTIQASNDFGGVLEAIVKVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIHDDIRF 180
Query: 186 IEQHLDEMERENFFRLKRVKAILEAR 211
I LD+ ERE + K++KA +E +
Sbjct: 181 IRSVLDQREREAGYTQKKIKAKIEGK 206
>sp|P43435|NTPD_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT D (NA(+)-TRANSLOCATING ATPASE
SUBUNIT D) >gi|1075711|pir||F53610 H+-transporting ATP
synthase (EC 3.6.1.34) chain D - Enterococcus hirae
>gi|487280|dbj|BAA04277.1| (D17462) Na+ -ATPase subunit
D [Enterococcus hirae]
Length = 230
Score = 128 bits (318), Expect = 6e-29
Identities = 71/200 (35%), Positives = 120/200 (59%), Gaps = 1/200 (0%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L + PTRMEL +LK+++ A RGHKLLK+KQD L+ +F + + LR+ + K+ + A
Sbjct: 3 LNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTAM 62
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVP-ELKRKASDRGYAF 123
+ A+ V + E+ N I + +NIM V+VPL+ + + Y +
Sbjct: 63 KDFVLAKSTVEEAFIDELLALPAENVSISVVEKNIMSVKVPLMNFQYDETLNETPLEYGY 122
Query: 124 ISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTI 183
+ + + +D + + F ++L ++LAEVE++ + + +EIEKT+RRVNALEY+ IP+++ TI
Sbjct: 123 LHSNAELDRSIDGFTQLLPKLLKLAEVEKTCQLMAEEIEKTRRRVNALEYMTIPQLEETI 182
Query: 184 KFIEQHLDEMERENFFRLKR 203
+I+ L+E ER RL +
Sbjct: 183 YYIKMKLEENERAEVTRLSQ 202
>gb|AAK40881.1| ATP synthase subunit D (atpD) [Sulfolobus solfataricus]
Length = 213
Score = 110 bits (273), Expect = 1e-23
Identities = 58/207 (28%), Positives = 122/207 (58%), Gaps = 2/207 (0%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
K+ PT++ L++ +R+++L +LL+ K++ L++ T + + E+ ++M++ +E
Sbjct: 4 KVLPTKINLIQFRRQLRLITVIKRLLENKREVLLLYLRTYASQYEKIYNEVNEEMKKVYE 63
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIS 125
+ +A G ++E+++ KP+ E+ + I GV+VP I + K + ++ +
Sbjct: 64 SYLQAVASEGISNIEEMALSQKPSLEVNSAIKVIFGVKVPTIRLD--KSTIPAKPFSDVE 121
Query: 126 TTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKF 185
T+ + + E+ E L I L E+E +++ L E+ KT+R +N+++ I+P + +IKF
Sbjct: 122 TSPYLSESYEEMTEALNKIIELVELESTIRSLVSELRKTQRLINSIDNYILPFYRGSIKF 181
Query: 186 IEQHLDEMERENFFRLKRVKAILEARQ 212
I+Q L++ +RE F RLK ++ IL+ R+
Sbjct: 182 IKQILEDRQREEFSRLKIIRRILQRRR 208
>emb|CAB57734.1| (Y18930) atpase gamma chain membrane-associated [Sulfolobus
solfataricus]
Length = 213
Score = 110 bits (273), Expect = 1e-23
Identities = 58/207 (28%), Positives = 122/207 (58%), Gaps = 2/207 (0%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
K+ PT++ L++ +R+++L +LL+ K++ L++ T + + E+ ++M++ +E
Sbjct: 4 KVLPTKINLIQFRRQLRLITVIKRLLENKREVLLLYLRTYASQYEKIYNEVNEEMKKVYE 63
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIS 125
+ +A G ++E+++ KP+ E+ + I GV+VP I + K + ++ +
Sbjct: 64 SYLQAVASEGISNIEEMALSQKPSLEVNSAIKVIFGVKVPTIRLD--KSTIPAKPFSDVE 121
Query: 126 TTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKF 185
T+ + + E+ E L I L E+E +++ L E+ KT+R +N+++ I+P + +IKF
Sbjct: 122 TSPYLSESYEEMTEALNKIIELVELESTIRSLVSELRKTQRLINSIDNYILPFYRGSIKF 181
Query: 186 IEQHLDEMERENFFRLKRVKAILEARQ 212
I+Q L++ +RE F RLK ++ IL+ R+
Sbjct: 182 IKQILEDRQREEFSRLKIIRRILQRRR 208
>sp|O59823|VATD_SCHPO VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT)
>gi|7493600|pir||T41656 vacuolar ATP synthase subunit -
fission yeast (Schizosaccharomyces pombe)
>gi|3136032|emb|CAA19063.1| (AL023590) vacuolar ATP
synthase subunit D [Schizosaccharomyces pombe]
Length = 285
Score = 109 bits (271), Expect = 2e-23
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 3/203 (1%)
Query: 9 PTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEALR 68
PTRM L +K R+K A+ GH LLK K +AL F I ++++ + M+ A ++
Sbjct: 11 PTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGRVMQIAAFSMA 70
Query: 69 RAQVDVGSLRLKEISIGVK-PNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFISTT 127
+G+ EI VK P + + NI GV +P E+ L D +
Sbjct: 71 EVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEM-NLDESIDDFQLTGLGKG 129
Query: 128 ST-VDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFI 186
+ A + +E+ +E ++LA + + LG ++ T RRVN++E+IIIPR++NTIK+I
Sbjct: 130 GQQIQKARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVNSIEHIIIPRLENTIKYI 189
Query: 187 EQHLDEMERENFFRLKRVKAILE 209
E L+E+ERE+F RLK+V+ E
Sbjct: 190 ESELEELEREDFTRLKKVQKTKE 212
>sp|P34462|VATD_CAEEL PROBABLE VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT)
>gi|482192|pir||S40985 H+-transporting ATP synthase (EC
3.6.1.34) chain D - Caenorhabditis elegans
>gi|3877608|emb|CAA81600.1| (Z27080) similar to
membrane-associated atpase gamma chain, contains
similarity to Pfam domain: PF01813 (ATP synthase subunit
D), Score=354.0, E-value=5.2e-103, N=1~cDNA EST CEMSA49R
comes from this gene~cDNA EST yk466a12.5 comes from this
gene~cDNA ES>
Length = 257
Score = 108 bits (266), Expect = 7e-23
Identities = 66/207 (31%), Positives = 115/207 (54%), Gaps = 11/207 (5%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
+ + P+RM +K R+K A++GH LLK+K DAL + F I + + + + + M+EA
Sbjct: 9 IAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVMKEAA 68
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASD-----R 119
+L A+ G I + + ++ N++GV +P+ + + A D +
Sbjct: 69 FSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDLTGLGK 128
Query: 120 GYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRM 179
G A I+ + + + +EL + LA ++ L + I+ T RRVNA+E++IIPR+
Sbjct: 129 GGANIARLK------KNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRI 182
Query: 180 KNTIKFIEQHLDEMERENFFRLKRVKA 206
+NT+ +I LDEMERE FFR+K+++A
Sbjct: 183 ENTLTYIVTELDEMEREEFFRMKKIQA 209
>emb|CAC17412.1| (AJ297976) vacuolar proton pump protein [Suberites domuncula]
Length = 250
Score = 103 bits (255), Expect = 1e-21
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
+ + P+RM L +K R+K A++GH LLK K DAL + F I + + + + + M+EA
Sbjct: 7 INVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGEVMKEAT 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEV-----PELKRKASDR 119
+L A+ G + K + + N+ GV +P+ E + R
Sbjct: 67 FSLAEAKFVAGDFSEMVLQNVDKAKIRLHTKKDNVAGVTLPVFETYSDGSDTYELTGLSR 126
Query: 120 GYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRM 179
G +S V F + + L + LA ++ + L + I+ T RRVNA+E++IIP++
Sbjct: 127 GGQLVSKCKEV------FGKAVRLLVELASLQTAFVTLDEVIKVTNRRVNAIEHVIIPKI 180
Query: 180 KNTIKFIEQHLDEMERENFFRLKRVK 205
+ T+ +I LDE ERE F+RLK+++
Sbjct: 181 QRTLSYISIELDEREREEFYRLKKIQ 206
>sp|P87220|VATD_CANAL VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT)
>gi|2183244|gb|AAC24464.1| (AF002134) Vma8p [Candida
albicans]
Length = 267
Score = 102 bits (252), Expect = 3e-21
Identities = 66/207 (31%), Positives = 109/207 (51%), Gaps = 13/207 (6%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
++ PTRM L +K ++K A++GH LLK K +AL F I +R++ + M+ A
Sbjct: 9 QVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMGRVMQTAAF 68
Query: 66 ALRRAQVDVGSLRLKEISIGV-KPNEEIEIRTRNIMGVRVPLIE------VPELKRKASD 118
+L Q G ++ V K ++ + N+ GV +P + V + K A
Sbjct: 69 SLAEVQYATGDNISYQVQESVQKARFTVKAKQENVSGVFLPTFDSHINEDVNDFKLTALA 128
Query: 119 RGYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPR 178
RG + + + + +E + LA ++ + L + I+ T RRVNA+E++IIPR
Sbjct: 129 RGGQQVQKAKLI------YSKAVETLVELASLQTAFIILDEVIKITNRRVNAIEHVIIPR 182
Query: 179 MKNTIKFIEQHLDEMERENFFRLKRVK 205
+NTI +I LDEM+RE F+RLK+V+
Sbjct: 183 TENTIAYINGELDEMDREEFYRLKKVQ 209
>sp|O59941|VATD_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT)
>gi|2995849|gb|AAC08354.1| (AF053230) vacuolar ATPase
subunit D [Neurospora crassa]
Length = 266
Score = 101 bits (250), Expect = 5e-21
Identities = 67/211 (31%), Positives = 104/211 (48%), Gaps = 25/211 (11%)
Query: 9 PTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEALR 68
PTR L +K ++K AE GH LLK K +AL F RE+ ++++EA +
Sbjct: 12 PTRQSLGIMKAKLKGAETGHSLLKRKSEALTKRF-----------REITRRIDEAKRKMG 60
Query: 69 RAQVDVGSLRLKEISIGVKPNEEIEI-------------RTRNIMGVRVPLIEVPELKRK 115
R + + SL L E++ V N +I + N+ GV +P E + +
Sbjct: 61 RV-MQIASLSLAEVTYAVGGNIGYQIQESAKSARFRIRAKQENVSGVLLPAFEAYQAEGN 119
Query: 116 ASDRGYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYII 175
V E + +E + LA ++ + L + I+ RRVNA+E++I
Sbjct: 120 DDFAMTGLGKGGQQVQRCRETYARAVEALVELASLQTAFVILDEVIKVVNRRVNAIEHVI 179
Query: 176 IPRMKNTIKFIEQHLDEMERENFFRLKRVKA 206
IPR +NTIK+I LDE++RE F+RLK+V A
Sbjct: 180 IPRTENTIKYINSELDELDREEFYRLKKVAA 210
>gb|AAD10366.1| (U45447) vacuolar proton-ATPase subunit D [Oryctolagus cuniculus]
Length = 247
Score = 101 bits (248), Expect = 9e-21
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
++I P+RM +K R+K A+ G LLK+K DAL + F I + + + + + M EA
Sbjct: 7 IEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G I K +I + N+ GV +P+ E + +D Y
Sbjct: 67 FSLAEAKFTAGDFSTTAIQNVNKAQVKIRAKKDNVAGVTLPVFEH---YHEGTD-SYELT 122
Query: 125 STTSTVDVAAE---KFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
+ A+ + + +EL + LA ++ S L + I+ T RRVNA+E++IIPR++
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIER 182
Query: 182 TIKFIEQHLDEMERENFFRLKRVK 205
T+ +I LDE ERE F+RLK+++
Sbjct: 183 TLAYIITELDEREREEFYRLKKIQ 206
>sp|P22721|ATPD_SULAC MEMBRANE-ASSOCIATED ATPASE GAMMA CHAIN (SUL-ATPASE GAMMA) (ATP
SYNTHASE, SUBUNIT D) >gi|99258|pir||B36493
H+-transporting ATP synthase (EC 3.6.1.34) gamma chain -
Sulfolobus acidocaldarius
Length = 216
Score = 100 bits (247), Expect = 1e-20
Identities = 57/209 (27%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
KI PT++ L+ L+++++L +LL+ K++ L++ +E L E+ + ++E +E
Sbjct: 5 KILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLKEVYE 64
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIS 125
G ++ + V P+ +++ + + GVR+P++++ E + G +S
Sbjct: 65 TYLMGVSAEGISTVESYANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGDIEVS 124
Query: 126 T--TSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTI 183
T + D AE F+++LEL E+E +++ L E+ KT+R +NA++ I+P ++
Sbjct: 125 PYITKSRDAIAEAFKKILELV----EMESAIRSLSTELRKTQRLINAIDSYILPYYTSSA 180
Query: 184 KFIEQHLDEMERENFFRLKRVKAILEARQ 212
K+I+ LD+ RE F RLK ++ +L+ R+
Sbjct: 181 KYIKGVLDDRTREEFVRLKMIRKVLQRRR 209
>gi|7706757 vacuolar proton pump delta polypeptide [Homo sapiens]
>gi|11435184|ref|XP_007450.1| vacuolar proton pump delta
polypeptide [Homo sapiens]
>gi|10720351|sp|Q9Y5K8|VATD_HUMAN VACUOLAR ATP SYNTHASE
SUBUNIT D (V-ATPASE D SUBUNIT) (V-ATPASE 28 KDA
ACCESSORY PROTEIN) >gi|4929325|gb|AAD33953.1|AF145316_1
(AF145316) vacuolar proton pump delta polypeptide [Homo
sapiens] >gi|11119719|gb|AAG30726.1|AF104629_1
(AF104629) vacuolar H-ATPase subunit D; VATD [Homo
sapiens]
Length = 247
Score = 100 bits (247), Expect = 1e-20
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
++I P+RM +K R+K A+ G LLK+K DAL + F I + + + + + M EA
Sbjct: 7 IEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G I K +I + N+ GV +P+ E + +D Y
Sbjct: 67 FSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEH---YHEGTD-SYELT 122
Query: 125 STTSTVDVAAE---KFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
+ A+ + + +EL + LA ++ S L + I+ T RRVNA+E++IIPR++
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIER 182
Query: 182 TIKFIEQHLDEMERENFFRLKRVK 205
T+ +I LDE ERE F+RLK+++
Sbjct: 183 TLAYIITELDEREREEFYRLKKIQ 206
>gb|AAD40384.1| (AF100741) vacuolar H-ATPase subunit D [Homo sapiens]
Length = 247
Score = 100 bits (247), Expect = 1e-20
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
++I P+RM +K R+K A+ G LLK+K DAL + F I + + + + + M EA
Sbjct: 7 IEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G I K +I + N+ GV +P+ E + +D Y
Sbjct: 67 FSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEH---YHEGTD-SYELT 122
Query: 125 STTSTVDVAAE---KFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
+ A+ + + +EL + LA ++ S L + I+ T RRVNA+E++IIPR++
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIER 182
Query: 182 TIKFIEQHLDEMERENFFRLKRVK 205
T+ +I LDE ERE F+RLK+++
Sbjct: 183 TLAYIITELDEREREEFYRLKKIQ 206
>emb|CAB46439.1| (AJ225059) v-ATPase subunit D [Arabidopsis thaliana]
Length = 261
Score = 100 bits (247), Expect = 1e-20
Identities = 66/203 (32%), Positives = 110/203 (53%), Gaps = 4/203 (1%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L + PT L +K R+ A RGH LLK+K DAL ++F + + ++ + + + M+ +
Sbjct: 8 LNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGEMMKTSS 67
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNE-EIEIRTRNIMGVRVPLIE-VPELKRKASDRGYA 122
AL + G + VK ++ RT NI GV++P + E + K G A
Sbjct: 68 FALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLA 127
Query: 123 FISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNT 182
V + + +E+ + LA ++ S L + I+ T RRVNALE ++ P+++NT
Sbjct: 128 --RGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPKLENT 185
Query: 183 IKFIEQHLDEMERENFFRLKRVK 205
I +I+ LDE+ERE+FFRLK+++
Sbjct: 186 ISYIKGELDELEREDFFRLKKIQ 208
>emb|CAB65912.1| (AJ251992) vacuolar ATPase subunit D [Manduca sexta]
Length = 246
Score = 100 bits (247), Expect = 1e-20
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L I P+R + +K R+ A++GH LLK+K DAL + F I + + + + + M+EA
Sbjct: 7 LAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGEVMKEAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G + K +I + N+ GV +P+ E + SD
Sbjct: 67 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQ---DGSDTYELAG 123
Query: 125 STTSTVDVAAEK--FEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNT 182
+A K F+ ++L + LA ++ S L + I+ T RRVNA+E++IIPR++ T
Sbjct: 124 LARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERT 183
Query: 183 IKFIEQHLDEMERENFFRLKRVK 205
+ +I LDE+ERE F+RLK+++
Sbjct: 184 LAYIISELDELEREEFYRLKKIQ 206
>gb|AAG30225.1| (AF298810) vacuolar ATPase subunit D [Mus musculus]
Length = 247
Score = 100 bits (247), Expect = 1e-20
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
++I P+RM +K R+K A+ G LLK+K DAL + F I + + + + + M EA
Sbjct: 7 IEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G I K +I + N+ GV +P+ E + +D Y
Sbjct: 67 FSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEH---YHEGTD-SYELT 122
Query: 125 STTSTVDVAAE---KFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
+ A+ + + +EL + LA ++ S L + I+ T RRVNA+E++IIPR++
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIER 182
Query: 182 TIKFIEQHLDEMERENFFRLKRVK 205
T+ +I LDE ERE F+RLK+++
Sbjct: 183 TLAYIITELDEREREEFYRLKKIQ 206
>emb|CAB72289.1| (AL138972) /prediction=(method:""genefinder"", version:""084"",
score:""61.35""); /prediction=(method:""genscan"",
version:""1.0""); /match=(desc:""VACUOLAR PROTON-ATPASE
SUBUNIT D"", species:""Oryctolagus cuniculus (Rabbit)"",
ranges:(query:129190..12>
Length = 249
Score = 99.8 bits (245), Expect = 2e-20
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 15/208 (7%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L I P+R +K R+ A +GH LLK+K DAL M F I + + + + + M+EA
Sbjct: 7 LPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTR--NIMGVRVPLIE-----VPELKRKAS 117
+L + G + +I + +I+IRT+ N+ GV +P+ E V +
Sbjct: 67 FSLAEVKFTTGDIN--QIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGL 124
Query: 118 DRGYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIP 177
RG ++ + ++ + L ++LA ++ S L I+ T RRVNA+E++IIP
Sbjct: 125 ARGGQQLAKLK------KNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIP 178
Query: 178 RMKNTIKFIEQHLDEMERENFFRLKRVK 205
R+ TI++I LDE+ERE F+RLK+++
Sbjct: 179 RINRTIEYIISELDELEREEFYRLKKIQ 206
>pir||T49156 v-ATPase subunit D (vATPD) - Arabidopsis thaliana
>gi|7630068|emb|CAB88290.1| (AL353032) v-ATPase subunit
D (vATPD) [Arabidopsis thaliana]
Length = 261
Score = 99.8 bits (245), Expect = 2e-20
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 4/203 (1%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L + PT L +K R+ A RGH LLK+K DAL ++F + + ++ + + M+ +
Sbjct: 8 LNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDMMKTSS 67
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNE-EIEIRTRNIMGVRVPLIE-VPELKRKASDRGYA 122
AL + G + VK ++ RT NI GV++P + E + K G A
Sbjct: 68 FALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLA 127
Query: 123 FISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNT 182
V + + +E+ + LA ++ S L + I+ T RRVNALE ++ P+++NT
Sbjct: 128 --RGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPKLENT 185
Query: 183 IKFIEQHLDEMERENFFRLKRVK 205
I +I+ LDE+ERE+FFRLK+++
Sbjct: 186 ISYIKGELDELEREDFFRLKKIQ 208
>pir||B72733 probable membrane-associated ATPase gamma chain APE0402 - Aeropyrum
pernix (strain K1) >gi|5104042|dbj|BAA79358.1|
(AP000059) 204aa long hypothetical membrane-associated
ATPase gamma chain [Aeropyrum pernix]
Length = 204
Score = 99.1 bits (243), Expect = 4e-20
Identities = 58/208 (27%), Positives = 116/208 (54%), Gaps = 13/208 (6%)
Query: 9 PTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEALR 68
PT++ L++L+R + + R ++++EK++ ++ ++ E + +RE+ ++E ++
Sbjct: 3 PTKINLIRLRRELAMLRRIRRVMEEKREVILHYITSMAAEYVRYQREVYSELERIYQNYY 62
Query: 69 RAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIE-----VPELKRKASDRGYAF 123
G R + + + + E+++ TR + V+ P+ VP L A
Sbjct: 63 LGVAAEGIERARAFTAPAEGSLEVDVSTRTLFAVKTPVFSLREETVPPLPLPAGSDPKL- 121
Query: 124 ISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTI 183
S +D+ + +L+ ++LAE EE+L+RL E++ T+R +NAL+Y+I+P +N I
Sbjct: 122 --VQSILDMRS-----ILDKLLKLAEYEETLQRLISELKDTQRLINALDYVILPSYQNAI 174
Query: 184 KFIEQHLDEMERENFFRLKRVKAILEAR 211
KFI+ L++ RE+F RLK +K +EA+
Sbjct: 175 KFIKLVLEDRMREDFVRLKIIKRKMEAK 202
>gb|AAF58126.1| (AE003810) CG8186 gene product [Drosophila melanogaster]
>gi|10121397|gb|AAG13186.1|AF218238_1 (AF218238)
vacuolar proton-translocating ATPase subunit D
[Drosophila melanogaster]
Length = 246
Score = 99.1 bits (243), Expect = 4e-20
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
L I P+R + +K R+ A++GH LLK+K DAL M F I + + + + M+EA
Sbjct: 7 LPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G + + K +I + N+ GV +P+ E + SD
Sbjct: 67 FSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQ---DGSDTYELAG 123
Query: 125 STTSTVDVAAEK--FEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNT 182
+A K ++ ++L + LA ++ S L + I+ T RRVNA+E++IIPR+ T
Sbjct: 124 LARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRIDRT 183
Query: 183 IKFIEQHLDEMERENFFRLKRVK 205
+ +I LDE+ERE F+RLK+++
Sbjct: 184 LAYIISELDELEREEFYRLKKIQ 206
>sp|P39942|VATD_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT) (V-ATPASE 28
KDA ACCESSORY PROTEIN) >gi|1083086|pir||A55910
H+-transporting ATP synthase (EC 3.6.1.34) chain D -
bovine >gi|517446|gb|AAC48458.1| (U11927) vacuolar
H-ATPase subunit D [Bos gaurus]
Length = 247
Score = 98.7 bits (242), Expect = 5e-20
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 5 LKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAF 64
++I P+RM +K R+K A+ G LLK+K DAL + F I + + + + + M EA
Sbjct: 7 IEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAA 66
Query: 65 EALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFI 124
+L A+ G I K +I + N+ GV +P+ E + +D Y
Sbjct: 67 FSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEH---YHEGTD-SYELT 122
Query: 125 STTSTVDVAAE---KFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKN 181
+ A+ + + +EL + LA ++ S L + I+ T RRVN +E++IIPR++
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNRIEHVIIPRIER 182
Query: 182 TIKFIEQHLDEMERENFFRLKRVK 205
T+ +I LDE ERE F+RLK+++
Sbjct: 183 TLAYIITELDEREREEFYRLKKIQ 206
>gb|AAG22401.1| (AE003424) EG:BACR25B3.4 gene product [Drosophila melanogaster]
Length = 231
Score = 96.7 bits (237), Expect = 2e-19
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 15/196 (7%)
Query: 17 LKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEALRRAQVDVGS 76
+K R+ A +GH LLK+K DAL M F I + + + + + M+EA +L + G
Sbjct: 1 MKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAAFSLAEVKFTTGD 60
Query: 77 LRLKEISIGVKPNEEIEIRTR--NIMGVRVPLIE-----VPELKRKASDRGYAFISTTST 129
+ +I + +I+IRT+ N+ GV +P+ E V + RG ++
Sbjct: 61 IN--QIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGLARGGQQLAKLK- 117
Query: 130 VDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKFIEQH 189
+ ++ + L ++LA ++ S L I+ T RRVNA+E++IIPR+ TI++I
Sbjct: 118 -----KNYQSAVRLLVQLASLQTSFVTLDDVIKVTNRRVNAIEHVIIPRINRTIEYIISE 172
Query: 190 LDEMERENFFRLKRVK 205
LDE+ERE F+RLK+++
Sbjct: 173 LDELEREEFYRLKKIQ 188
>pir||A71313 probable V-type ATPase, subunit D (atpD-2) - syphilis spirochete
>gi|3322819|gb|AAC65514.1| (AE001228) V-type ATPase,
subunit D (atpD-2) [Treponema pallidum]
Length = 209
Score = 94.0 bits (230), Expect = 1e-18
Identities = 62/204 (30%), Positives = 113/204 (55%), Gaps = 11/204 (5%)
Query: 7 IKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFEA 66
+ PT+ L ++ ++ LA G++LL++K++ L ME ++ +E L EL K+ ++A+ +
Sbjct: 5 LAPTKSNLAYVRDQLGLARDGYRLLEQKREILFMELTSLLEEVHLLETELDKRRKQAYAS 64
Query: 67 LRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRV----PLIEVPELKRKASDRGYA 122
L + + G + ++ ++ I G+R +++ P+L+ YA
Sbjct: 65 LWQLLLAQGRDDIAACALVTPVPCRVQQEVLLIAGLRFLRLDAVMQPPKLQ-------YA 117
Query: 123 FISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNT 182
+ +++ +D A E F +L+ R+A V+ + RL E+ KT+RRVNAL IIP+M T
Sbjct: 118 ALGSSACMDRAREDFGLLLQTLTRMASVQTIVWRLASEMRKTQRRVNALSKQIIPQMCET 177
Query: 183 IKFIEQHLDEMERENFFRLKRVKA 206
+IE L+E +RE+ F LK +KA
Sbjct: 178 CMYIESVLEERDRESTFVLKSLKA 201
>gi|6320784 vacuolar ATPase V1 domain subunit D; Vma8p [Saccharomyces
cerevisiae] >gi|418399|sp|P32610|VATD_YEAST VACUOLAR ATP
SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT)
>gi|320705|pir||S30826 H+-transporting ATPase (EC
3.6.1.35) chain D, vacuolar - yeast (Saccharomyces
cerevisiae) >gi|603628|gb|AAB64991.1| (U18779) Vma8p:
subunit D of vacuolar H-ATPase [Saccharomyces
cerevisiae] >gi|1042219|gb|AAB34686.1| vacuolar
proton-translocating ATPase V1 subunit, V H(+) -ATPase
V1 subunit=VMA8 product [Saccharomyces
cerevisiae=baker's yeast, Peptide, 256 aa]
Length = 256
Score = 93.2 bits (228), Expect = 2e-18
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 37/219 (16%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
++ PTRM L +K ++K A +G+ LLK K +AL F R++ K++++A +
Sbjct: 7 QVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRF-----------RDITKRIDDAKQ 55
Query: 66 ALRRAQVDVGSLRLKEIS------IGVKPNE-------EIEIRTRNIMGVRVPLIE---- 108
+ R + + L E+S IG + E ++ R N+ GV + E
Sbjct: 56 KMGRV-MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYID 114
Query: 109 --VPELKRKASDRGYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKR 166
+ + + RG V A E + +E + LA ++ + L + I+ T R
Sbjct: 115 PEINDFRLTGLGRG------GQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNR 168
Query: 167 RVNALEYIIIPRMKNTIKFIEQHLDEMERENFFRLKRVK 205
RVNA+E++IIPR +NTI +I LDE++RE F+RLK+V+
Sbjct: 169 RVNAIEHVIIPRTENTIAYINSELDELDREEFYRLKKVQ 207
>gb|AAA72941.1| (M57238) ATPase gamma-subunit [Sulfolobus acidocaldarius]
Length = 196
Score = 77.6 bits (188), Expect = 1e-13
Identities = 47/207 (22%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 6 KIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIYDEALSLRRELIKKMEEAFE 65
KI PT++ L+ L+++++L +LL+ K++ L++ +E L E+ + ++E +E
Sbjct: 5 KILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLKEVYE 64
Query: 66 ALRRAQVDVGSLRLKEISIGVKPNEEIEIRTRNIMGVRVPLIEVPELKRKASDRGYAFIS 125
G ++ + V P+ +++ + + GVR+P++++ E + G
Sbjct: 65 TYLMGVSAEGISTVESYANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFG----- 119
Query: 126 TTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEKTKRRVNALEYIIIPRMKNTIKF 185
D+ + + +S + E+ KT+R +NA++ I+P ++ K+
Sbjct: 120 -----DIEVSPY------------ITKSRDAISTELRKTQRLINAIDSYILPYYTSSAKY 162
Query: 186 IEQHLDEMERENFFRLKRVKAILEARQ 212
I+ LD+ RE F RLK ++ +L+ R+
Sbjct: 163 IKGVLDDRTREEFVRLKMIRKVLQRRR 189
>gb|AAF58545.1| (AE003823) CG13167 gene product [Drosophila melanogaster]
Length = 373
Score = 77.3 bits (187), Expect = 1e-13
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 40/231 (17%)
Query: 3 EILKIKPTRMELLKLKRRVKLAERGHKLLKEKQDALIMEFFTIY----------DEALSL 52
+IL I P+R + +K+RV A RG LLK K+DA+ M+ + DEA+
Sbjct: 5 DILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRELRRIRFDQDMHGDEAM-- 62
Query: 53 RRELIKKMEEAF--------EALRRAQVDVGSLRLKEISI-GVKPNEEIEIRTRNIMGVR 103
R I M +A + + R+ V SLR EI I GVK N +E+ T+ +
Sbjct: 63 -RNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNT-LELETKGVGAFP 120
Query: 104 VPLIEVPELKRKASDRGYAFISTTSTVDVAAEKFEEVLELAIRLAEVEESLKRLGKEIEK 163
+ + ++ V + + + L+ + A +E ++ L +
Sbjct: 121 LAGLSCGGMQ----------------VSRIRDSYTKALKALVEFASLEYQVRMLEAASLQ 164
Query: 164 TKRRVNALEYIIIPRMKNTIKFIEQHLDEMERENFFRLKRVKA-ILEARQS 213
T RVNALE+++IP ++NT +I L+E ERE+F+RLKR +A LEA+ +
Sbjct: 165 TNMRVNALEHVVIPILQNTYNYICGELEEFEREDFYRLKRSQAKQLEAKMA 215
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.137 0.355
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63113730
Number of Sequences: 2977
Number of extensions: 2336193
Number of successful extensions: 12351
Number of sequences better than 1.0e-10: 36
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 12297
Number of HSP's gapped (non-prelim): 36
length of query: 214
length of database: 189,106,746
effective HSP length: 61
effective length of query: 153
effective length of database: 152,599,039
effective search space: 23347652967
effective search space used: 23347652967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 163 (67.9 bits)