BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2391 (PAB2391) DE:Hypothetical protein
(393 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75130 hypothetical protein PAB2391 - Pyrococcus abyssi (st... 788 0.0
pir||E71087 hypothetical protein PH0962 - Pyrococcus horikoshii ... 660 0.0
sp|Q60346|Y041_METJA HYPOTHETICAL PROTEIN MJ0041 >gi|2128094|pir... 320 2e-86
emb|CAC12418.1| (AL445067) conserved hypothetical protein [Therm... 256 3e-67
gb|AAG20156.1| (AE005093) Vng1982c [Halobacterium sp. NRC-1] 238 6e-62
pir||G69042 conserved hypothetical protein MTH1322 - Methanobact... 228 9e-59
gi|11498752 conserved hypothetical protein [Archaeoglobus fulgid... 222 4e-57
pir||B72639 hypothetical protein APE0546 - Aeropyrum pernix (str... 187 2e-46
emb|CAB60423.1| (AL117203) cDNA EST yk326a3.5 comes from this ge... 136 4e-31
gb|AAF51539.2| (AE003590) CG3709 gene product [Drosophila melano... 120 3e-26
pir||T31596 hypothetical protein Y48C3A.n - Caenorhabditis elegans 115 9e-25
gb|AAF79615.1|AC027665_16 (AC027665) F5M15.23 [Arabidopsis thali... 102 5e-21
>pir||F75130 hypothetical protein PAB2391 - Pyrococcus abyssi (strain Orsay)
>gi|5458270|emb|CAB49759.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 393
Score = 788 bits (2012), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MIIEKAGKILEEHNLCNHCLGRMFAKLGKGTNEERGRAIRLVLSMEINKEIEEPKNCEIC 60
MIIEKAGKILEEHNLCNHCLGRMFAKLGKGTNEERGRAIRLVLSMEINKEIEEPKNCEIC
Sbjct: 1 MIIEKAGKILEEHNLCNHCLGRMFAKLGKGTNEERGRAIRLVLSMEINKEIEEPKNCEIC 60
Query: 61 NGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGEPINREFN 120
NGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGEPINREFN
Sbjct: 61 NGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGEPINREFN 120
Query: 121 RELGKMFAKATGKVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTPAPGF 180
RELGKMFAKATGKVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTPAPGF
Sbjct: 121 RELGKMFAKATGKVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTPAPGF 180
Query: 181 DESVATIICRIFKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIEE 240
DESVATIICRIFKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIEE
Sbjct: 181 DESVATIICRIFKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIEE 240
Query: 241 EINSSRKVEVLELRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGATI 300
EINSSRKVEVLELRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGATI
Sbjct: 241 EINSSRKVEVLELRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGATI 300
Query: 301 RQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKPS 360
RQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKPS
Sbjct: 301 RQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKPS 360
Query: 361 VSEILGKEAWCELLDVLDVLEEDENVKGNSREV 393
VSEILGKEAWCELLDVLDVLEEDENVKGNSREV
Sbjct: 361 VSEILGKEAWCELLDVLDVLEEDENVKGNSREV 393
>pir||E71087 hypothetical protein PH0962 - Pyrococcus horikoshii
>gi|3257376|dbj|BAA30059.1| (AP000004) 407aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 407
Score = 660 bits (1685), Expect = 0.0
Identities = 311/391 (79%), Positives = 366/391 (93%), Gaps = 1/391 (0%)
Query: 1 MIIEKAGKILEEHNLCNHCLGRMFAKLGKGTNEERGRAIRLVLSMEINKEIEEPKNCEIC 60
MIIEKA +ILE+H LCNHCLGRMFAKLGKGTNEERG+AIRL+LSME+N+E++EP+NCE+C
Sbjct: 17 MIIEKAREILEKHPLCNHCLGRMFAKLGKGTNEERGKAIRLILSMELNREVKEPENCELC 76
Query: 61 NGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGEPINREFN 120
GIF+RM+E L+L AV+DYEF+TF+IGSRFP++ILE+EK+IWE+F ITTGEPINREFN
Sbjct: 77 QGIFRRMNELLDLVRNAVEDYEFQTFQIGSRFPKDILEKEKKIWEEFGITTGEPINREFN 136
Query: 121 RELGKMFAKATGKVPS-ERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTPAPG 179
RELGK+FAK TGK+P+ ERPDIVII++PFS KVELQVNPIY+AGRYRKLVRGIPQTPAPG
Sbjct: 137 RELGKLFAKVTGKIPNRERPDIVIIVEPFSSKVELQVNPIYVAGRYRKLVRGIPQTPAPG 196
Query: 180 FDESVATIICRIFKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIE 239
F+ES+ATIICR+FK+ F GKCIFKGAGREDVDVRTLGRGRPFVVEIK PRKR VDLK+IE
Sbjct: 197 FEESIATIICRVFKKNFRGKCIFKGAGREDVDVRTLGRGRPFVVEIKKPRKRKVDLKLIE 256
Query: 240 EEINSSRKVEVLELRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGAT 299
EEINSS KVEVLEL+FI EE+EKILT RH+K+YEALVYV++G++ EEV KVVKSL+G+
Sbjct: 257 EEINSSGKVEVLELKFITPEESEKILTARHKKIYEALVYVKDGVSAEEVEKVVKSLKGSE 316
Query: 300 IRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKP 359
I+QRTPRRVLNSR+D+VR+R+VY+ GEY+DEHHFKLKL+TDGGLYIKELISGD+GRTKP
Sbjct: 317 IKQRTPRRVLNSRADIVRVRRVYNVSGEYIDEHHFKLKLVTDGGLYIKELISGDKGRTKP 376
Query: 360 SVSEILGKEAWCELLDVLDVLEEDENVKGNS 390
SVSEILGKEAWCE+LDVLDVL+ DENV+G+S
Sbjct: 377 SVSEILGKEAWCEILDVLDVLDGDENVEGDS 407
>sp|Q60346|Y041_METJA HYPOTHETICAL PROTEIN MJ0041 >gi|2128094|pir||A64305 conserved
hypothetical protein MJ0041 - Methanococcus jannaschii
>gi|1498801|gb|AAB98022.1| (U67462) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 454
Score = 320 bits (811), Expect = 2e-86
Identities = 189/436 (43%), Positives = 253/436 (57%), Gaps = 59/436 (13%)
Query: 8 KILEEHNLCNHCLGRMFAKLGKGTNEERGRAIRLVLSMEINKEIEEPK------------ 55
+IL+++ LC+ C GR++AKL TN ERGRA++L ++E+ +I++ K
Sbjct: 23 EILKKYPLCDRCFGRLYAKLLHTTNTERGRALKLYKALELEAKIKKAKEKGINYEEELEL 82
Query: 56 ----------------------NCEICNGIF--KRMSEFLNLALEAVKDYEFETFRIGSR 91
NC C GIF ++M + LN A+E +K+Y+F+TF IG+
Sbjct: 83 LKALAKSGVDEIRLEDIEIEKENCPWCRGIFNKQKMEKLLNKAIELLKEYDFDTFLIGTH 142
Query: 92 FPREILEREKEIWEKFSITTGEPINREFNRELGKMFAKATGKVPS-ERPDIVIILDPFSR 150
P EI + EKEI +F E I +EF RE GKM A K P E PDIV+ ++P++
Sbjct: 143 IPEEIKDLEKEIETEFM----ESIKQEFGREFGKMLAVRLDKAPDKEYPDIVVHINPYTE 198
Query: 151 KVELQVNPIYIAGRYRKLVRGIPQTPAP-----------------GFDESVATIICRIFK 193
++ LQ+NP++I GRYRKLVRGIPQT P + SV II + F
Sbjct: 199 EIYLQINPLFIKGRYRKLVRGIPQTRWPCRKCRGKGCELCNYTGKKYPISVEEIIAKPFL 258
Query: 194 RYFNG-KCIFKGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIEEEINSSRKVEVLE 252
G F GAGRED+DVR LG GRPFV+EIK P+ R +DL I EEIN +VEVL
Sbjct: 259 EATKGVDAKFHGAGREDIDVRMLGDGRPFVLEIKEPKIRKIDLNKIAEEINKDGRVEVLN 318
Query: 253 LRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGATIRQRTPRRVLNSR 312
L F ++ T HRK Y ALV + IT EE+ + K L TI Q+TP+RVL+ R
Sbjct: 319 LEFGVRKDKVIFKNTPHRKTYRALVECSDKITDEELKLLEKELENRTIYQKTPKRVLHRR 378
Query: 313 SDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKPSVSEILGKEAWCE 372
+DL RIRKVY + +D++HF++ + DGGLYIKELISGD GRT PSVS IL K C+
Sbjct: 379 ADLERIRKVYKVKTSKVDDNHFEMIIYCDGGLYIKELISGDDGRTNPSVSSILNKNCICK 438
Query: 373 LLDVLDVLEEDENVKG 388
LDVL + + + KG
Sbjct: 439 ELDVLKIHDNNLLEKG 454
>emb|CAC12418.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 389
Score = 256 bits (647), Expect = 3e-67
Identities = 146/385 (37%), Positives = 228/385 (58%), Gaps = 12/385 (3%)
Query: 10 LEEHNLCNHCLGRMFAKLGKG-TNEERGRAIRLVLSMEINK---EIEEPKNCEICNGIFK 65
L + LC C GR+FA G +N ERG ++ + E + KNC+IC+GIF
Sbjct: 7 LANYRLCKRCSGRIFAYHYHGISNLERGEYLQFAIGCETGNPDFSFVDSKNCDICHGIFD 66
Query: 66 RMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGEPINREFNRELGK 125
R + +L + V D ++ TF +GS FP++ + E++I +KF ++GE I +EFNRE GK
Sbjct: 67 RFDDIYDLVAKKVGDAQYSTFLVGSVFPQDTIRMEEDIQKKFG-SSGESIKKEFNREFGK 125
Query: 126 MFAKATGKVPSE-RPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTP---APGFD 181
F+ TGK S+ PD+ I+++ V++++ IYI G+YRK R +PQT P D
Sbjct: 126 YFSARTGKEYSQDNPDLTILVNAEYLFVDVKIRSIYIYGKYRKFRRDMPQTRWIHRPNGD 185
Query: 182 ESVATIICRIFKRYFNGKCIF-KGAGREDVDVRTLGRGRPFVVEIKNPRKRNVDLKIIEE 240
+V ++I +F RY G + G+GREDVDVR LG GR FV+E++NPR R +L + +
Sbjct: 186 -TVESVIGSVFTRYAGGTNYYLHGSGREDVDVRMLGNGREFVLEVENPRYREFELDPVVK 244
Query: 241 EINSSRK-VEVLELRFINSEEAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGAT 299
EIN+S K VE+ +++F + + ++ +HRK+Y+ALV I + + +L G
Sbjct: 245 EINTSGKGVEIFDVKFSSHDAVSEVKLEKHRKVYDALVVSDRPIDESRLLEACINLTGKN 304
Query: 300 IRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKP 359
I QRTP RV RSDLVR R++ + + + ++ + + G YIKEL++GD GRT+P
Sbjct: 305 IYQRTPLRVAQRRSDLVRTRRIDQVDLVGVSANEAEILISAEAGTYIKELVNGDGGRTRP 364
Query: 360 SVSEILGKEAWCELLDVLDVLEEDE 384
S+SE+ G + LDV+ + ++
Sbjct: 365 SLSEMYGSPLNVKELDVIKICRGED 389
>gb|AAG20156.1| (AE005093) Vng1982c [Halobacterium sp. NRC-1]
Length = 425
Score = 238 bits (602), Expect = 6e-62
Identities = 152/414 (36%), Positives = 221/414 (52%), Gaps = 31/414 (7%)
Query: 2 IIEKAGKILEEHNLCNHCLGRMFAKLGKG-TNEERGRAIRLVLSMEINKEIEEPKN-CEI 59
I+E A +L E +C+ CLGR FA+ G +N ERGRA+R +++ ++ EEP+ C +
Sbjct: 3 ILEDARAVLAETPVCDACLGRCFAERSFGLSNAERGRALRTAVALADDEPYEEPEEPCWV 62
Query: 60 CNGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSIT--TGEPINR 117
C G R EF +L ++AV D F+T+++G++ P + E E + + + GEP
Sbjct: 63 CEGASGRFDEFADLVVDAVADASFDTYQVGTQAPPLVEENEAMLRDLAGLAEDAGEPFKS 122
Query: 118 EFNRELGKMFAKATG-KVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQT- 175
E NRE+GK TG +V RPD++ ++D + V++ VN ++ GRYRKL RGIPQT
Sbjct: 123 ECNREVGKRVGDRTGTEVDFGRPDVLAVIDVEAETVDVTVNSAFVYGRYRKLERGIPQTK 182
Query: 176 ---------------PAPGFD-------ESVATIICRIFKRYFNG-KCIFKGAGREDVDV 212
P P D ESV + G + F GAGRED+D
Sbjct: 183 WPCSDCNGSGTLVDSPCPHCDGTGFLYPESVEQLTAPPVVDAMGGTEASFHGAGREDIDA 242
Query: 213 RTLGRGRPFVVEIKNPRKRNVDLKIIEEEIN--SSRKVEVLELRFINSEEAEKILTTRHR 270
LG GRPFV+E+ P+ R+ D + + IN + K EV + E E++ R
Sbjct: 243 LMLGTGRPFVIEVAEPQDRHPDADALADAINDFADGKAEVEGVAVAGYEMVERVKELDAR 302
Query: 271 KLYEALVYVREGITREEVTKVVKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLD 330
K Y A V + +++ + L GATI Q TP RV + R+ LVR R VYD + D
Sbjct: 303 KRYRADVEFDAPVGDDDLRDAIDELDGATIEQETPNRVDHRRAHLVRERDVYDITADRED 362
Query: 331 EHHFKLKLLTDGGLYIKELISGDRGRTKPSVSEILGKEAWCELLDVLDVLEEDE 384
+ H +++ +GGLYIKEL+S D GRT PS++ +LG A LDV+ V E E
Sbjct: 363 DTHATVEIEGEGGLYIKELVSSDDGRTNPSLAGLLGVGAVVTALDVVAVAGETE 416
>pir||G69042 conserved hypothetical protein MTH1322 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622428|gb|AAB85800.1| (AE000896) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 406
Score = 228 bits (575), Expect = 9e-59
Identities = 157/408 (38%), Positives = 228/408 (55%), Gaps = 40/408 (9%)
Query: 4 EKAGKILE--EHNLCNHCLGRMFAKLGKGT-NEERGRAIRLVLSMEINKEIEEPKNCEIC 60
++ G +LE E +C HCLGR F L +G N RG ++ S++++ C IC
Sbjct: 5 QRLGGLLEITESRICLHCLGRHFVDLVEGPGNRLRGEKLQKKFSLKLSGP------CMIC 58
Query: 61 NGIFKRMSEFLNLALEAVKDY--EFETFRIGSRFPREILEREKEIWEKFSITTGEPINRE 118
+F R+ E + E V + E+ + +G+R P +++E + EI ++ I T E + R+
Sbjct: 59 GDVFDRIDEAAGMVKEKVDELGLEYSSVLVGTRLPPKMVELDDEIRKRLGIQT-EGLKRD 117
Query: 119 FNRELGKMFAKATG-KVPSERPDIVIILD-PFSRKVELQVNPIYIAGRYRKLVRGIPQTP 176
NRELGK K G E PD+V+++D +V +Q+NP+++ GRYRKLVRGIPQT
Sbjct: 118 LNRELGKRVVKLLGCSAEFEDPDLVVMVDFRGDIRVWIQINPLFLEGRYRKLVRGIPQTR 177
Query: 177 APG-----------------FDESVATIICRIFKRYFNGK-CIFKGAGREDVDVRTLGRG 218
P + SV +I G+ F G+GREDVDVR LG G
Sbjct: 178 WPCRKCRGRGCERCNYTGKMYPTSVEELIAGPILEASQGRDARFHGSGREDVDVRMLGTG 237
Query: 219 RPFVVEIKNPRKRNVDLKIIEEEIN--SSRKVEVLELRFINSEEAEKILTTRHR--KLYE 274
RPFV+EI+ PR RN+D + +EEE+N + VEV LRF + ++ + K+Y
Sbjct: 238 RPFVLEIREPRVRNLDPESLEEEVNRRAQGMVEVEGLRFSTRKRKVELKDSSQSRYKVYR 297
Query: 275 ALVYVREGITREEVTKVVKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHF 334
ALV + +T E++ ++ I+QRTP RV + R+D VR R+V + LD
Sbjct: 298 ALVELDGDVTDEDLERLGSL---DIIKQRTPVRVSHRRADRVRERRVLEISWNLLD-GCL 353
Query: 335 KLKLLTDGGLYIKELISGDRGRTKPSVSEILGKEAWCELLDVLDVLEE 382
+L + +GGLYIKELISGD GRT+PSVS +LG A C LDVL+V +E
Sbjct: 354 ELIIKGEGGLYIKELISGDSGRTEPSVSSVLGVPARCVALDVLEVGDE 401
>gi|11498752 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450782|pir||G69393 conserved hypothetical protein
AF1152 - Archaeoglobus fulgidus
>gi|2649435|gb|AAB90092.1| (AE001024) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 357
Score = 222 bits (561), Expect = 4e-57
Identities = 135/344 (39%), Positives = 192/344 (55%), Gaps = 24/344 (6%)
Query: 55 KNCEICNGIFKRMSEFLNLALEAVKDYEFETFRIGSRFPREILEREKEIWEKFSITTGE- 113
+ CE C F R+ EF ++ + +YEFETF +GSR + K + E S+ E
Sbjct: 18 EKCEACCNAFDRVEEFAEEIVKKMSEYEFETFNVGSRVWGSL----KALQEYLSLKGIEY 73
Query: 114 PINREFNRELGKMFAKATGKVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIP 173
I + FN +L + + TG + PDI ++ D + ELQ+ P++I GRY K VR I
Sbjct: 74 EIKQRFNTKLARAIEEKTGSKRTLNPDITVLFDLETFTFELQIRPVFIYGRYLKRVRNIS 133
Query: 174 QT-----------------PAPGFDESVATIICRIFKRYFNGK-CIFKGAGREDVDVRTL 215
QT + SV +I R F + GAGREDVD R L
Sbjct: 134 QTRWLCGYCNGEGCEVCNFTGKKYVSSVEELIAMPAVRLFKARDAKLHGAGREDVDARML 193
Query: 216 GRGRPFVVEIKNPRKRNVDLKIIEEEINSSRKVEVLELRFINSEEAEKILTTRHRKLYEA 275
G GRPFV+E+ PRKR VDLK +EE INS + V V +L + ++E+ ++ T RHRK Y A
Sbjct: 194 GTGRPFVLEVIEPRKRFVDLKELEEAINSQKWVAVRDLEYTDAEKVREVKTERHRKTYRA 253
Query: 276 LVYVREGITREEVTKVVKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFK 335
V E + RE + + ++SL+G IRQRTP RV + R+D VR+R++YDA +
Sbjct: 254 KVVFEEKVERERLIEALESLKG-EIRQRTPMRVSHRRADRVRVRRLYDARLIHHTGRVAV 312
Query: 336 LKLLTDGGLYIKELISGDRGRTKPSVSEILGKEAWCELLDVLDV 379
++ + GLYIKEL+SGD GRT+PS++E +G A + LDV+ V
Sbjct: 313 VEFEAEAGLYIKELVSGDNGRTRPSLAEKVGVNARVDRLDVIAV 356
>pir||B72639 hypothetical protein APE0546 - Aeropyrum pernix (strain K1)
>gi|5104199|dbj|BAA79514.1| (AP000060) 390aa long
hypothetical protein [Aeropyrum pernix]
Length = 390
Score = 187 bits (469), Expect = 2e-46
Identities = 122/341 (35%), Positives = 184/341 (53%), Gaps = 19/341 (5%)
Query: 57 CEICNGIFKRMSEFLNLALEA----VKDYEFETFRIGSRFPREILEREKEIWEKFSITTG 112
C +C G R+ + A+E ++ Y+ E F +G R R + E+E+ G
Sbjct: 48 CAVCGG---RLESVIASAVEEGYRLLRAYDIERFVVGVRLERGVAMAEEEVKLAAGAGYG 104
Query: 113 EPINREFNRELGKMFAKATG-KVPSERPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRG 171
E I E RE+GK+ G V + P+ ++++ V++QVN + RY KL R
Sbjct: 105 ESIKAEIRREVGKLLVSRGGVTVDFDSPEATLMVEFPGGGVDIQVNSLLYKARYWKLARN 164
Query: 172 IPQ----TPAPGFDESVATIICRIFKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKN 227
I Q TP SV + + K + + AGREDVD R LG GRP +VE+K+
Sbjct: 165 ISQAYWPTPEGPRYFSVEQALWPVLKLTGGERLVVHAAGREDVDARMLGSGRPMIVEVKS 224
Query: 228 PRKRNVDLKIIEEEINSSRKVEVLELRFINSEEAEKIL-----TTRHRKLYEALVYVREG 282
PR+R + L+ +E N+ K ++ RF + + ++ T R RK+Y ALV V G
Sbjct: 225 PRRRRIPLEELEAAANAGGK-GLVRFRFETAAKRAEVALYKEETARVRKVYRALVAVEGG 283
Query: 283 ITREEVTKVVKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLL-TD 341
++ +V + ++L GA I QRTP RVL+ R D++R R++Y + L+ +L +
Sbjct: 284 VSEVDVEGLRRALEGAVIMQRTPSRVLHRRPDILRRRRLYSLDCSPLEGAPLMECILEAE 343
Query: 342 GGLYIKELISGDRGRTKPSVSEILGKEAWCELLDVLDVLEE 382
GGLYIKEL+SGD GRT+PS +E+LG+EA C LDV+ V E
Sbjct: 344 GGLYIKELVSGDGGRTRPSFAEVLGREAVCIELDVVWVEHE 384
>emb|CAB60423.1| (AL117203) cDNA EST yk326a3.5 comes from this gene [Caenorhabditis
elegans]
Length = 487
Score = 136 bits (339), Expect = 4e-31
Identities = 98/278 (35%), Positives = 146/278 (52%), Gaps = 31/278 (11%)
Query: 129 KATGKVPSERPDIVIILDPFSR---KVELQVNPIYIAGRYRKLVRGIPQTP--------- 176
+ TG++ + I P + +++ + +P+YIAGRY K R +PQ+P
Sbjct: 178 QVTGRINEQIAKKYIFKSPTRKCTFQLQFERDPVYIAGRYCKYSRCLPQSPWSEDKDAPR 237
Query: 177 APGFDESVATIICRIFKRYFNGK-CIFKGAGREDVDVRTLGRGRPFVVEIKNPR------ 229
PG SV+ +C + K+ F F +GRED+DVR LG GRPFVVE++N R
Sbjct: 238 EPG--NSVSEKVCDLLKKQFGASDSRFVTSGREDIDVRMLGTGRPFVVELRNCRTTAPVR 295
Query: 230 --KRNVDLKIIEEEINSSRKVEVLELRFINSEEAEKILTTRH--RKLYEALVYVREGITR 285
K LK ++E IN + V+V+ L + + +EK+ RK Y A Y I+
Sbjct: 296 GIKYLETLKTVQEAINVQKDVKVVSLTRVPRDVSEKLCVGEEDKRKQYCAYCYSILPISD 355
Query: 286 EEVTKVVKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLY 345
+ T +S I Q+TP RV+ R+ L R R +Y LD+HHF+++L T G Y
Sbjct: 356 SQFT-AAQSKIPLKIVQKTPVRVMKRRALLDRERWIYSMNFLKLDDHHFEVRLETQAGTY 414
Query: 346 IKELISGDRGRTKPSVSEILGKEAWCELLDVLDVLEED 383
IKE + GD GRT+PS++E+L E +D+LE D
Sbjct: 415 IKEFVHGDFGRTRPSLAELLDVEH-----GEVDILELD 447
>gb|AAF51539.2| (AE003590) CG3709 gene product [Drosophila melanogaster]
Length = 500
Score = 120 bits (298), Expect = 3e-26
Identities = 86/246 (34%), Positives = 134/246 (53%), Gaps = 22/246 (8%)
Query: 152 VELQVNPIYIAGRYRKLVRGIPQTP-----APGFDESVATIICRIFKRYFN---GKCIFK 203
++LQ I +AGRYRKL R + TP ++S+ II R +F GK F
Sbjct: 244 IDLQGPLICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIIIRHVGPHFTEKLGKITFM 303
Query: 204 GAGREDVDVRTLGRGRPFVVEIKNPRKRNV---DLKIIEEEINSSRKVEVLELRFINSEE 260
+GREDVDVR LG+GRPFV+EI N ++ + + +E +++S V + L+ + EE
Sbjct: 304 SSGREDVDVRCLGKGRPFVLEIPNAKRSCLTKDEAFAMERAVDASGMVSIHHLQVVPREE 363
Query: 261 AEKILT--TRHRKLYEALVYVREGITREEVTKVVKSLR---GATIRQRTPRRVLNSRSDL 315
I T + +K Y AL ++E ++ K+++ L+ I+Q+TP RVL+ R
Sbjct: 364 LTHIKTGEEQKKKFYRALCALQEPVS----VKILEQLQISASFNIQQKTPIRVLHRRPLH 419
Query: 316 VRIRKVYD--AEGEYLDEHHFKLKLLTDGGLYIKELISGDRGRTKPSVSEILGKEAWCEL 373
R R +Y A+ + + ++T G YIKEL+ G+ GRT PS+S I+GK +
Sbjct: 420 TRPRTIYSVTAKVHRGNPKALIIDIVTQAGTYIKELVHGEFGRTTPSLSSIIGKPMDIQA 479
Query: 374 LDVLDV 379
LDV+ +
Sbjct: 480 LDVVGI 485
>pir||T31596 hypothetical protein Y48C3A.n - Caenorhabditis elegans
Length = 513
Score = 115 bits (285), Expect = 9e-25
Identities = 79/212 (37%), Positives = 115/212 (53%), Gaps = 17/212 (8%)
Query: 183 SVATIICRIFKRYFNGK-CIFKGAGREDVDVRTLGRGRPFVVEIKNPR--------KRNV 233
+V+ +C + K+ F F +GRED+DVR LG GRPFVVE++N R K
Sbjct: 268 NVSEKVCDLLKKQFGASDSRFVTSGREDIDVRMLGTGRPFVVELRNCRTTAPVRGIKYLE 327
Query: 234 DLKIIEEEINSSRKVEVLELRFINSEEAEKILTTRH--RKLYEALVYVREGITREEVTKV 291
LK ++E IN + V+V+ L + + +EK+ RK Y A Y I+ + T
Sbjct: 328 TLKTVQEAINVQKDVKVVSLTRVPRDVSEKLCVGEEDKRKQYCAYCYSILPISDSQFT-A 386
Query: 292 VKSLRGATIRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLTDGGLYIKELIS 351
+S I Q+TP RV+ R+ L R R +Y LD+HHF+++L T G YIKE +
Sbjct: 387 AQSKIPLKIVQKTPVRVMKRRALLDRERWIYSMNFLKLDDHHFEVRLETQAGTYIKEFVH 446
Query: 352 GDRGRTKPSVSEILGKEAWCELLDVLDVLEED 383
GD GRT+PS++E+L E +D+LE D
Sbjct: 447 GDFGRTRPSLAELLDVEH-----GEVDILELD 473
>gb|AAF79615.1|AC027665_16 (AC027665) F5M15.23 [Arabidopsis thaliana]
Length = 682
Score = 102 bits (253), Expect = 5e-21
Identities = 91/278 (32%), Positives = 129/278 (45%), Gaps = 53/278 (19%)
Query: 138 RPDIVIILDPFSRKVELQVNPIYIAGRYRKLVRGIPQTPAPGFDE-----SVATIIC-RI 191
R V++ +P V PI+ +GRY K R + Q+ DE SV I+ I
Sbjct: 419 RTFFVLVYEPCIFSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNI 478
Query: 192 FKRYFNGKCIFKGAGREDVDVRTLGRGRPFVVEIKNPRK--RNVDLKIIEEEINSSRK-- 247
F AGRED+DVR LG GRPF++E++N R+ LK +EE+IN S K
Sbjct: 479 LPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKL 538
Query: 248 VEVLELRFINSE--------EAEKILTTRHRKLYEALVYVREGITREEVTKVVKSLRGAT 299
V V +L+ I S+ EAEK +K Y ALV++ + ++ + L+
Sbjct: 539 VGVKDLKCIGSQCWAMMREGEAEK------QKQYVALVWISRPLEEKDFNS-ISCLKELK 591
Query: 300 IRQRTPRRVLNSRSDLVRIRKVYDAEGEYLDEHHFKLKLLT-----------------DG 342
I Q+TP RVL+ RS L R + + H+ L+LLT
Sbjct: 592 ILQKTPVRVLHRRSPLDREKII-----------HWLLQLLTHLIIILERWASFKFSIMQA 640
Query: 343 GLYIKELISGDRGRTKPSVSEILGKEAWCELLDVLDVL 380
G YIKE + GD GRT P + E+ + DV+ VL
Sbjct: 641 GTYIKEFVHGDLGRTTPRMHELARVRSRYRKYDVVSVL 678
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.399
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143793838
Number of Sequences: 2977
Number of extensions: 6269379
Number of successful extensions: 16216
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 16171
Number of HSP's gapped (non-prelim): 13
length of query: 393
length of database: 189,106,746
effective HSP length: 56
effective length of query: 337
effective length of database: 155,591,474
effective search space: 52434326738
effective search space used: 52434326738
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)