BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2395 378437 378036 -134 !not a gene!
         (134 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C71195 hypothetical protein PH1834 - Pyrococcus horikoshii ...   107  6e-23

>pir||C71195 hypothetical protein PH1834 - Pyrococcus horikoshii
           >gi|3258271|dbj|BAA30954.1| (AP000007) 111aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 111
           
 Score =  107 bits (264), Expect = 6e-23
 Identities = 55/80 (68%), Positives = 64/80 (79%)

Query: 1   MPLAIPLRISSLTSPGTAKEKKKAIGLPPIAAISLTFIVTTFLPASSGVMKSGTSVFQTS 60
           +PLAIPL + S    GT +EKK A G PPIAA+SLTFIVTTF PASSGV+KSGTSV  TS
Sbjct: 30  IPLAIPLNVFSSVFSGTPREKKNASGNPPIAAMSLTFIVTTFFPASSGVIKSGTSVLHTS 89

Query: 61  ISDVTSSQELLSLMNPASSP 80
           +SDVT++QE L+L  PASSP
Sbjct: 90  MSDVTNNQESLNLTKPASSP 109


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.317    0.131    0.356 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43846266
Number of Sequences: 2977
Number of extensions: 1468147
Number of successful extensions: 3786
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3785
Number of HSP's gapped (non-prelim): 1
length of query: 134
length of database: 189,106,746
effective HSP length: 59
effective length of query: 75
effective length of database: 153,796,013
effective search space: 11534700975
effective search space used: 11534700975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)