BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2427 (pheT) DE:phenylalanyl-tRNA synthetase, subunit beta
(pheT)
(556 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75049 phenylalanine--tRNA ligase (EC 6.1.1.20) chain beta ... 1117 0.0
pir||B71111 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain ... 1023 0.0
pir||C64438 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain ... 440 e-122
pir||A69203 phenylalanine--tRNA ligase (EC 6.1.1.20) - Methanoba... 407 e-112
gi|11499019 phenylalanyl-tRNA synthetase, subunit beta (pheT) [A... 404 e-111
sp|P94283|SYFB_BORBU PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 333 4e-90
pir||S75388 probable phenylalanine--tRNA ligase (EC 6.1.1.20) be... 316 6e-85
gb|AAK40457.1| Phenylalanyl-tRNA synthetase beta subunit (pheT) ... 316 6e-85
sp|O83059|SYFB_TREPA PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 298 1e-79
gb|AAG20568.1| (AE005127) phenylalanyl-tRNA synthetase subunit b... 280 2e-74
pir||E72457 probable phenylalanyl-tRNA synthetase beta chain APE... 275 9e-73
pir||T38232 phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain... 255 8e-67
gb|AAF21173.1|AC010926_25 (AC010926) putative phenylalanyl-tRNA ... 254 2e-66
gb|AAF97193.1|AF268611_17 (AF268611) phenylalanyl-tRNA synthetas... 249 5e-65
pir||T21245 hypothetical protein F22B5.9 - Caenorhabditis elegan... 247 2e-64
pir||T18243 phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain... 247 3e-64
sp|O13432|SYFA_CANAL PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN CY... 244 2e-63
gi|5032011 phenylalanyl-tRNA synthetase beta-subunit [Homo sapie... 235 1e-60
gb|AAF29136.1|AF161521_1 (AF161521) HSPC173 [Homo sapiens] 235 1e-60
gb|AAD26855.1|AF123263_1 (AF123263) phenylalanyl tRNA synthetase... 233 4e-60
dbj|BAA95608.1| (D84430) phenylalanyl tRNA synthetase [Homo sapi... 231 2e-59
gb|AAF56268.1| (AE003747) CG5706 gene product [Drosophila melano... 231 2e-59
gi|6323089 Phenylalanyl-tRNA synthetase, alpha subunit, cytoplas... 224 2e-57
emb|CAC11691.1| (AL445064) phenylalanyl-tRNA synthetase beta cha... 217 3e-55
gb|AAA35151.1| (J03964) Phe-RNA synthetase [Saccharomyces cerevi... 133 6e-30
pir||A72330 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain ... 126 5e-28
pir||D82225 phenylalanyl-tRNA synthetase, beta chain VC1220 [imp... 122 8e-27
pir||B70449 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain ... 110 5e-23
emb|CAA37225.1| (X53057) phenylalanyl-tRNA synthetase beta subun... 101 3e-20
sp|P17922|SYFB_BACSU PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 101 3e-20
dbj|BAB06829.1| (AP001517) phenylalanyl-tRNA synthetase beta sub... 100 5e-20
emb|CAA23565.1| (V00291) phenylalanyl-tRNA synthetase alpha-subu... 93 9e-18
sp|P27002|SYFB_THETH PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 91 3e-17
pir||S22367 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain ... 91 3e-17
sp|P07395|SYFB_ECOLI PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 90 6e-17
pir||A83303 phenylalanyl-tRNA synthetase, beta subunit PA2739 [i... 89 1e-16
sp|P57230|SYFB_BUCAI PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 85 2e-15
emb|CAB72016.1| (AJ391257) phenylalanine-tRNA-synthetase beta ch... 85 2e-15
pir||A81940 probable phenylalanyl-tRNA synthetase beta chain NMA... 85 2e-15
pir||C81166 phenylalanyl-tRNA synthetase, beta chain NMB0728 [im... 83 7e-15
sp|P43820|SYFB_HAEIN PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 81 3e-14
sp|P74296|SYFB_SYNY3 PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 80 8e-14
sp|Q9ZDB4|SYFB_RICPR PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 79 1e-13
pir||B82888 phenylalanine-tRNA synthetase beta chain UU457 [impo... 78 2e-13
dbj|BAA86499.1| (AB033011) KIAA1185 protein [Homo sapiens] 75 2e-12
gi|11465812 phenylalanine tRNA synthetase [Porphyra purpurea] >g... 73 6e-12
sp|P47437|SYFB_MYCGE PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PH... 73 1e-11
pir||C82767 phenylalanyl-tRNA sinthetase beta chain XF0742 [impo... 73 1e-11
>pir||E75049 phenylalanine--tRNA ligase (EC 6.1.1.20) chain beta PAB2427
[similarity] - Pyrococcus abyssi (strain Orsay)
>gi|5458803|emb|CAB50290.1| (AJ248287) phenylalanyl-tRNA
synthetase, subunit beta (pheT) [Pyrococcus abyssi]
Length = 556
Score = 1117 bits (2857), Expect = 0.0
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW
Sbjct: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS
Sbjct: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
Query: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEIL 180
QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEIL
Sbjct: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEIL 180
Query: 181 EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDL 240
EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDL
Sbjct: 181 EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDL 240
Query: 241 KKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKD 300
KKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKD
Sbjct: 241 KKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKD 300
Query: 301 EEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAV 360
EEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAV
Sbjct: 301 EEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAV 360
Query: 361 QGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWS 420
QGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWS
Sbjct: 361 QGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWS 420
Query: 421 ALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTF 480
ALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTF
Sbjct: 421 ALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTF 480
Query: 481 TNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIE 540
TNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIE
Sbjct: 481 TNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIE 540
Query: 541 VPVVAFEIFLRPLYQP 556
VPVVAFEIFLRPLYQP
Sbjct: 541 VPVVAFEIFLRPLYQP 556
>pir||B71111 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain - Pyrococcus
horikoshii >gi|3257065|dbj|BAA29748.1| (AP000003) 556aa
long hypothetical phenylalanyl-tRNA synthetase subunit
beta chain [Pyrococcus horikoshii]
Length = 556
Score = 1023 bits (2617), Expect = 0.0
Identities = 491/555 (88%), Positives = 532/555 (95%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MPKFDVSKSDLERL+GRSFS+EEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW
Sbjct: 1 MPKFDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
SAEGVARQI+WALG++ GLP+YEVK+S+V VYVDEKLK++RPYGVYAIVEGL LDEDSLS
Sbjct: 61 SAEGVARQIKWALGIEKGLPKYEVKKSNVTVYVDEKLKDIRPYGVYAIVEGLRLDEDSLS 120
Query: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEIL 180
QMIQLQEK+ALTFGRRRREVAIGIFDF+K+KPPIYY+AAEKTEKF PLG++EE+TLEEIL
Sbjct: 121 QMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKAAEKTEKFAPLGYKEEMTLEEIL 180
Query: 181 EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDL 240
EKHEKG EYGHLIKDK YPLL+DSEGNVLSMPPIINSE TGRVTT+TK VFIDVTGW L
Sbjct: 181 EKHEKGREYGHLIKDKQFYPLLIDSEGNVLSMPPIINSEFTGRVTTDTKNVFIDVTGWKL 240
Query: 241 KKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKD 300
+KVMLALNVMVTALAERGGKIRSV+V+YKDFEI TPDLTPK FEVEL+YIRKLSGL+L D
Sbjct: 241 EKVMLALNVMVTALAERGGKIRSVRVVYKDFEIETPDLTPKEFEVELDYIRKLSGLELND 300
Query: 301 EEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAV 360
EIKELLE+MMY VE+ G+AKL YPAFRDDIMHARD+LEDVLIAYGYNNIEPEEPKLAV
Sbjct: 301 GEIKELLEKMMYEVEISRGRAKLKYPAFRDDIMHARDILEDVLIAYGYNNIEPEEPKLAV 360
Query: 361 QGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWS 420
QGRGDPFKDFEDAIRDLMVGFGLQE+MTFNLTNKEVQFKKMNIPEEEIVEIANP+SQRWS
Sbjct: 361 QGRGDPFKDFEDAIRDLMVGFGLQEVMTFNLTNKEVQFKKMNIPEEEIVEIANPISQRWS 420
Query: 421 ALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTF 480
ALRKW+LPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKT+SEPKLAVALAG+ YTF
Sbjct: 421 ALRKWILPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTVSEPKLAVALAGTGYTF 480
Query: 481 TNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIE 540
TNAKEILD+LMRHLG EYEIEE EHGSFI GR GK++VNG+++GIIGE+HPQVLENWNIE
Sbjct: 481 TNAKEILDALMRHLGFEYEIEEVEHGSFIPGRAGKIIVNGRDIGIIGEVHPQVLENWNIE 540
Query: 541 VPVVAFEIFLRPLYQ 555
VPVVAFEIFLRPLY+
Sbjct: 541 VPVVAFEIFLRPLYR 555
>pir||C64438 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain - Methanococcus
jannaschii >gi|1591750|gb|AAB99110.1| (U67553)
phenylalanyl-tRNA synthetase, subunit beta (pheT)
[Methanococcus jannaschii]
Length = 548
Score = 440 bits (1120), Expect = e-122
Identities = 246/550 (44%), Positives = 339/550 (60%), Gaps = 7/550 (1%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MP +V K+DLERLV E E+ E++ ++EE+G+ + S + NRPD
Sbjct: 1 MPTINVKKADLERLVNMPLEDEFIEEKFPMMGVEVEGIFEEDGEKIIQF-SINPNRPDYL 59
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
SAEG+AR R +G+++GL +Y+++ SDV +YV+ RPY A+V+G+ +D+ L
Sbjct: 60 SAEGLARGFRGIIGIETGLKKYDIESSDVKLYVENV--ETRPYIAMALVKGVIVDDYVLE 117
Query: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTE-KFVPLGFEEELTLEEI 179
+I LQEK+ GR R++VAIGI D +KVKPP YY+ KFVPL +EE+T EI
Sbjct: 118 SIINLQEKLHWVMGRDRKKVAIGIHDADKVKPPFYYKEVSGDGIKFVPLNSDEEMTPREI 177
Query: 180 LEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWD 239
LEKHEKGI+Y HLIKD +P+++DSEG+VLSMPPIIN ELT RVTTET+ + IDVTG D
Sbjct: 178 LEKHEKGIKYAHLIKDDK-FPIILDSEGDVLSMPPIINGELT-RVTTETRNLLIDVTGTD 235
Query: 240 LKKVMLALNVMVTALAERG-GKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDL 298
V LN++VTALAER GKI +V+VI + + P+L E YI K+ G +L
Sbjct: 236 KYAVEKTLNIIVTALAERKYGKIHAVEVIKDNQSTIYPNLKEDVLETTSEYINKVLGANL 295
Query: 299 KDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKL 358
I L R + D K K+ PA+R DI D+ E+V IAYGYN E P +
Sbjct: 296 TPGTIINYLRRCRLDAQFVDNKIKVFIPAYRVDIFGEIDIAEEVAIAYGYNKFSGEYPII 355
Query: 359 AVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQR 418
G + + D IR++MVGFG E++ L+N EV FKKM I + +E+ P S
Sbjct: 356 GTIGELNQLEKKCDFIREIMVGFGFYEVINLMLSNDEVLFKKMRIEDNNYIEVLKPASIE 415
Query: 419 WSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEY 478
+RK +LP LME L N H+E PQ+IFE+G +IDE+ ETK+ K+A + +E
Sbjct: 416 HRIVRKSILPLLMETLRINKHKELPQKIFEIGDCVVIDENAETKSRVVKKIAGVIVDNET 475
Query: 479 TFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWN 538
F K ++ L+R L +EYE++ EH SFI GR K+L +GK +G GEIHP+V+ N+
Sbjct: 476 NFNEIKSYVEGLLRELKIEYELDNFEHPSFIKGRCAKILKDGKIIGYFGEIHPEVITNFE 535
Query: 539 IEVPVVAFEI 548
+E PVV FE+
Sbjct: 536 LEFPVVGFEL 545
>pir||A69203 phenylalanine--tRNA ligase (EC 6.1.1.20) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621860|gb|AAB85273.1| (AE000855) phenylalanyl-tRNA
synthetase [Methanobacterium thermoautotrophicum]
Length = 613
Score = 407 bits (1034), Expect = e-112
Identities = 222/553 (40%), Positives = 334/553 (60%), Gaps = 12/553 (2%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MP DL+ L G E+ D++ +++D +E+ KV F NRPDL
Sbjct: 65 MPVITFDYDDLKEL-GIDIDREKLLDVLPMMGSDIEDFDDESIKVEFF-----PNRPDLL 118
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
S EGVAR +R LG++ G+P Y+V +S V V VDE + +VRPY A++E + + L
Sbjct: 119 SVEGVARSLRGFLGIEKGMPSYDVHDSGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLK 178
Query: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAE-KTEKFVPLGFEEELTLEEI 179
Q+++ QE + GR RR+VAIGI D ++V+PP Y E + F PL E+T EI
Sbjct: 179 QVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEI 238
Query: 180 LEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWD 239
LE+H KG+ Y HL++D YPL+ D G+VLSMPPIIN ELT ++T T+++ +DVTG D
Sbjct: 239 LEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELT-KLTVNTRRILVDVTGTD 297
Query: 240 LKKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLK 299
+ V LN++ T+ AE GG+I SV+V D E+ PDLTP+ V ++ +++GL+L
Sbjct: 298 DRAVRQTLNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELS 357
Query: 300 DEEIKELLERM-MYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKL 358
+E+ +LL + M + D + + PA+R DI+H D++E++ + + IEPE P +
Sbjct: 358 ADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDI 417
Query: 359 AVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQR 418
A D + + +IR++MVG G QE+M+ LT++E +++M + E+E VE+A P+SQ
Sbjct: 418 ATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQD 477
Query: 419 WSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEY 478
+ +RK LL L+EF +N HE+ PQ+IFEVG I+ ET++ KLA A+ S
Sbjct: 478 RTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSA 537
Query: 479 TFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEV---GIIGEIHPQVLE 535
FT K + +++ +LG E+ IE EH SFI GR + GK G GE+HP+V+
Sbjct: 538 GFTEIKSLAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVT 597
Query: 536 NWNIEVPVVAFEI 548
N+N+E PV+A EI
Sbjct: 598 NFNLEYPVIALEI 610
>gi|11499019 phenylalanyl-tRNA synthetase, subunit beta (pheT) [Archaeoglobus
fulgidus] >gi|7437782|pir||G69427 phenylalanyl-tRNA
synthetase, subunit beta (pheT) homolog - Archaeoglobus
fulgidus >gi|2649146|gb|AAB89822.1| (AE001005)
phenylalanyl-tRNA synthetase, subunit beta (pheT)
[Archaeoglobus fulgidus]
Length = 547
Score = 404 bits (1027), Expect = e-111
Identities = 222/561 (39%), Positives = 338/561 (59%), Gaps = 27/561 (4%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVL----YAKCELDDVWEENGKVYFKLDSKDTNR 56
MP + +LERLVG D +L C+++ V +++ V F NR
Sbjct: 1 MPVVTLYWDELERLVGAD------RDTILSRLPMLGCDIERVEDDHVDVEFF-----PNR 49
Query: 57 PDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDE 116
PDL+S EGVAR +R LG++ GL Y + + + V+E + VRP V +V+G+ + +
Sbjct: 50 PDLYSVEGVARALRGFLGIEKGLKSYSAVKGEWKITVEESVLAVRPRIVGCVVKGIRMTD 109
Query: 117 DSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTL 176
+ + ++++QE + T GR RR++AIG+ D KV P+ Y+A + FVPL F+ E+T+
Sbjct: 110 EVIRSLMEVQEDLHWTIGRNRRKMAIGVHDLSKVYFPLRYKAVDANFSFVPLDFDREMTV 169
Query: 177 EEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVT 236
EILE+H KG Y +++ K YP++VDS+ V+S PPIIN+E T RVT ET +FIDVT
Sbjct: 170 AEILEEHPKGKAYAFILEGKDSYPMIVDSKDEVISFPPIINAEKT-RVTEETTDLFIDVT 228
Query: 237 GWDLKKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGL 296
G+D + V A+ ++ LA+RGG+I SV+V+Y D +TP+L + EV+++ + L GL
Sbjct: 229 GFD-ENVDRAIAILACMLADRGGRIESVEVVYPDHVELTPNLDVRFMEVDVDEVNSLLGL 287
Query: 297 DLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEP 356
L EEIKE LE+M +S E+E K K+ P +R DIMH DV+EDV I YGY NI PE P
Sbjct: 288 SLSAEEIKESLEKMRFSCEIEGEKLKVGIPPYRADIMHEWDVIEDVAIGYGYENITPEIP 347
Query: 357 KLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKM---NIPEEEIVEIAN 413
GR P+ D +++M+G G E++TF LTN+ V ++KM P ++ V + +
Sbjct: 348 PTLTFGRTHPWNDIRSLAKEIMIGLGFTEVITFTLTNEAVMYEKMRRKGEPWKDYVPVMH 407
Query: 414 PVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVAL 473
P++ + LR LLP L+E LS N H E PQ +FEVG + ++R LA +
Sbjct: 408 PLTTEHTILRTSLLPKLLELLSYNKHHEMPQMVFEVGDVVVNSKNR-------LHLAACI 460
Query: 474 AGSEYTFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQV 533
S F+ + + ++MR L + +E+ E++ +FI GR +++V+GK VG+ GE+HP+V
Sbjct: 461 THSRANFSEIRSYVQAVMRELDLTWEVRESDDEAFIDGRRAEIVVDGKAVGVFGEVHPEV 520
Query: 534 LENWNIEVPVVAFEIFLRPLY 554
LE + + +PV AFEI L +
Sbjct: 521 LEGFELTMPVSAFEIDLSAFF 541
>sp|P94283|SYFB_BORBU PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|7437783|pir||A70164
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain pheT
- Lyme disease spirochete >gi|1785608|gb|AAB41019.1|
(U82978) phenylalanyl-tRNA synthetase beta subunit
[Borrelia burgdorferi] >gi|2688420|gb|AAC66870.1|
(AE001153) phenylalanyl-tRNA synthetase, beta subunit
(pheT) [Borrelia burgdorferi]
Length = 566
Score = 333 bits (844), Expect = 4e-90
Identities = 190/566 (33%), Positives = 323/566 (56%), Gaps = 17/566 (3%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MPK ++ K+ +G++F+ E +L+ K E D E +GK+ K++ DTNRPDLW
Sbjct: 1 MPKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKI--KIEFNDTNRPDLW 58
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVV-----VYVDEKLKNVRPYGVYAIVEGLNLD 115
S G+ARQI+ + ++ K+ D + VD K+ +RP+ + +GL ++
Sbjct: 59 SYLGLARQIKTYFFGEMPYYDFFSKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIIN 118
Query: 116 EDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELT 175
+ L +IQ QEK+ +G++RR +A+G+++ +K PI Y A+ KFVP G + EL+
Sbjct: 119 DKMLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYIASSPNHKFVPFGMDYELS 178
Query: 176 LEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDV 235
L EI EKH KG+EY H+IK+ +PLL+D NV+S PPIINS G + +F++V
Sbjct: 179 LLEINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEV 238
Query: 236 TGWDLKKVMLALNVMVTALAERGGKIRSVKVIYK-----DF-EIVTPDLTPKRFEVELNY 289
TG D + +LAL++ + G +I VK +++ DF E+V P + E +
Sbjct: 239 TGIDFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVEN 298
Query: 290 IRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYN 349
I +L G +L E I L++M + +D K ++ P +R+D +H DV+EDV+I G +
Sbjct: 299 INRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLS 358
Query: 350 NIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIV 409
+ PE PK GR P ++F +R+LMVG G QE++ + +K+ +MNI ++ +
Sbjct: 359 SFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMNINDQNFL 418
Query: 410 EIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATL--IDESRETKTISEP 467
+++NP+++ + +R ++P+L++ S +++ YP +IFE+G L +D + T T +
Sbjct: 419 KVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFT-- 476
Query: 468 KLAVALAGSEYTFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIG 527
LA ++G E +F I+ +L +L +E + E++ +I+GR +++ G +G G
Sbjct: 477 NLAFLMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFG 536
Query: 528 EIHPQVLENWNIEVPVVAFEIFLRPL 553
EI P VL N+ I +P FE+ + L
Sbjct: 537 EISPYVLNNFGIFIPCSVFEVNINKL 562
>pir||S75388 probable phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain -
Sulfolobus solfataricus >gi|1707793|emb|CAA69550.1|
(Y08257) phenylalanyl-tRNA synthetase alpha chain
[Sulfolobus solfataricus]
Length = 544
Score = 316 bits (800), Expect = 6e-85
Identities = 185/532 (34%), Positives = 305/532 (56%), Gaps = 20/532 (3%)
Query: 22 EEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPE 81
++ EDL+ K E+ V E N ++ D R DL S++G+AR I+ L + G +
Sbjct: 20 QKLEDLLFNLKSEIKPVDESNIEIEINAD-----RLDLLSSDGIARAIKGLLEKELGEAK 74
Query: 82 YEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVA 141
Y++ +++ + VD RPY + A++ +D L ++IQ QEK+ T GR+R++VA
Sbjct: 75 YDITDTEYKLIVDNV--RTRPYALAAVIYNAKID---LQELIQFQEKLHSTIGRKRKKVA 129
Query: 142 IGIFDFEKVKPP-IYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYP 200
IGI D +K+ I YR + KF+PL +EELT+ E+LEK E+G YG++ P
Sbjct: 130 IGIHDLKKIDSKRIEYREVPLSYKFIPLYEKEELTISEVLEKTEQGKLYGNISISNGVSP 189
Query: 201 LLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGK 260
+V +G VLS+PPIINS+ T ++ TK +FIDVTG + V L+++V+ LAE GG
Sbjct: 190 AIVQEDGEVLSIPPIINSDKT-KLDESTKDLFIDVTGTSFEAVAQTLDIIVSNLAEAGGT 248
Query: 261 IRSVKVIYKD--FEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELED 318
I VKVI D F+ +P L K V Y K+ G+ + +EEI + + RM + +E+
Sbjct: 249 IGRVKVIKTDNSFQQSSPLLIHKIQNVREEYANKILGIKISEEEICKHITRMRMNCNVEN 308
Query: 319 GKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLM 378
G ++ P +R DI++ D++ED+ ++ GYNN+EP + G D E +R+L
Sbjct: 309 GIIRVTVPQYRVDIINEIDIVEDIAMSIGYNNLEPSKYISTNYGSYDYLTLLERKMRELS 368
Query: 379 VGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNT 438
+G G E+ F L E I + + V+I NP+S+ ++A+R L+P L++FLS N
Sbjct: 369 IGAGFVEVFNFVLIKNE------KILDSKYVKILNPISEEYNAVRNSLIPILLDFLSKNQ 422
Query: 439 HEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEY 498
H ++P RIFE G + D S +T ++ + A A+ ++ ++ + + + +++ LG+E
Sbjct: 423 HAKFPIRIFETGDVVIYDSSTDTGFRNDKRAAYAIMDNKVSYEDVQAPIHYILKTLGIEV 482
Query: 499 EIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
+E + FI GR ++ +++G+IGEI+P VL + IE P V E+++
Sbjct: 483 NYKEENNDIFIEGRSASIVYENEKIGVIGEINPDVLIRFGIEYPTVIAELYI 534
>gb|AAK40457.1| Phenylalanyl-tRNA synthetase beta subunit (pheT) [Sulfolobus
solfataricus]
Length = 544
Score = 316 bits (800), Expect = 6e-85
Identities = 185/532 (34%), Positives = 305/532 (56%), Gaps = 20/532 (3%)
Query: 22 EEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPE 81
++ EDL+ K E+ V E N ++ D R DL S++G+AR I+ L + G +
Sbjct: 20 QKLEDLLFNLKSEIKPVDESNIEIEINAD-----RLDLLSSDGIARAIKGLLEKELGEAK 74
Query: 82 YEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVA 141
Y++ +++ + VD RPY + A++ +D L ++IQ QEK+ T GR+R++VA
Sbjct: 75 YDITDTEYKLIVDNV--RTRPYALAAVIYNAKID---LQELIQFQEKLHSTIGRKRKKVA 129
Query: 142 IGIFDFEKVKPP-IYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYP 200
IGI D +K+ I YR + KF+PL +EELT+ E+LEK E+G YG++ P
Sbjct: 130 IGIHDLKKIDSKRIEYREVPLSYKFIPLYEKEELTISEVLEKTEQGKLYGNISISNGVSP 189
Query: 201 LLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGK 260
+V +G VLS+PPIINS+ T ++ TK +FIDVTG + V L+++V+ LAE GG
Sbjct: 190 AIVQEDGEVLSIPPIINSDKT-KLDESTKDLFIDVTGTSFEAVAQTLDIIVSNLAEAGGT 248
Query: 261 IRSVKVIYKD--FEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELED 318
I VKVI D F+ +P L K V Y K+ G+ + +EEI + + RM + +E+
Sbjct: 249 IGRVKVIKTDNSFQQSSPLLIHKIQNVREEYANKILGIKISEEEICKHITRMRMNCNVEN 308
Query: 319 GKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLM 378
G ++ P +R DI++ D++ED+ ++ GYNN+EP + G D E +R+L
Sbjct: 309 GIIRVTVPQYRVDIINEIDIVEDIAMSIGYNNLEPSKYISTNYGSYDYLTLLERKMRELS 368
Query: 379 VGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNT 438
+G G E+ F L E I + + V+I NP+S+ ++A+R L+P L++FLS N
Sbjct: 369 IGAGFVEVFNFVLIKNE------KILDSKYVKILNPISEEYNAVRNSLIPILLDFLSKNQ 422
Query: 439 HEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEY 498
H ++P RIFE G + D S +T ++ + A A+ ++ ++ + + + +++ LG+E
Sbjct: 423 HAKFPIRIFETGDVVIYDSSTDTGFRNDKRAAYAIMDNKVSYEDVQAPIHYILKTLGIEV 482
Query: 499 EIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
+E + FI GR ++ +++G+IGEI+P VL + IE P V E+++
Sbjct: 483 NYKEENNDIFIEGRSASIVYENEKIGVIGEINPDVLIRFGIEYPTVIAELYI 534
>sp|O83059|SYFB_TREPA PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|7520793|pir||D71377
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain
(pheT) - syphilis spirochete >gi|3322265|gb|AAC65007.1|
(AE001186) phenylalanyl-tRNA synthetase beta subunit
(pheT) [Treponema pallidum]
Length = 604
Score = 298 bits (754), Expect = 1e-79
Identities = 174/516 (33%), Positives = 273/516 (52%), Gaps = 15/516 (2%)
Query: 48 KLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVV---------VYVDEKLK 98
K++ DTNRPDLWS G+AR +R G S +Y SD V VD +L+
Sbjct: 82 KIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFLSDRCTVRDSYGRCVVVDARLQ 141
Query: 99 NVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA 158
+RP+ + G L E L +IQ QE++A FGRRR +++G + + + P+ YRA
Sbjct: 142 TIRPFIAGFVARGTGLSEVRLWDLIQTQERLASNFGRRRCTLSLGCYRAQDICWPLAYRA 201
Query: 159 AEKTE-KFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIIN 217
E F PLG L+ E+IL +H KG EYGHL+KD PLLVD+ G VLS+ PI N
Sbjct: 202 VLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDYSFVPLLVDARGEVLSLIPITN 261
Query: 218 SELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGKIRSVKVIYK-----DFE 272
S G V T ++FI+ +G D+ V++A+N + L++ G +I V++ Y
Sbjct: 262 SASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSDMGMQIEPVQITYSFDTPWGRS 321
Query: 273 IVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDI 332
+ TP ++ EV I +L G+ L +I E RM +V+++ G + A+R+D
Sbjct: 322 VTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYRNDF 381
Query: 333 MHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLT 392
+HA D++E+V++ + P+ P GR I+ L+VGFG QE++ L
Sbjct: 382 LHAVDLIEEVMLGRTLDRFSPQVPCSFTVGRLSDLTLLTRKIKHLLVGFGYQEMIFHYLG 441
Query: 393 NKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLA 452
+ +M ++++EI NP+++ + +R+ ++P L+ + H YP RIFE+G
Sbjct: 442 SAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLLSAELKSAHALYPHRIFEIGKV 501
Query: 453 TLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEYEIEETEHGSFISGR 512
E T ++ L A E ++ ++ L+ L + Y++EE + F+ GR
Sbjct: 502 AFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLKLPYQVEEAQDPRFVLGR 561
Query: 513 VGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ V+G VGI GEIHPQVL NW+I +P A E+
Sbjct: 562 QASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGEL 597
>gb|AAG20568.1| (AE005127) phenylalanyl-tRNA synthetase subunit beta; PheY
[Halobacterium sp. NRC-1]
Length = 567
Score = 280 bits (710), Expect = 2e-74
Identities = 187/580 (32%), Positives = 284/580 (48%), Gaps = 41/580 (7%)
Query: 1 MPKFDVSKSDLERLVG-RSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDL 59
MP D+ +L RL G RS +E + E + E+ FKL+ + +R D
Sbjct: 1 MPVVDIDPDELRRLTGHRSKDDDELRQDLFGLGIEYEGETEDGD---FKLEF-EADRLDR 56
Query: 60 WSAEGVARQIRWALGLQSGL-------PEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGL 112
S EG+AR +R+ G G+ PE+ + +DV RPY A++ G+
Sbjct: 57 LSVEGIARSLRYHAGDDRGVDIPDTNAPEWAIDVTDVPAD--------RPYVTGAVIRGV 108
Query: 113 NLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPI------------YYRAAE 160
+LD D+L +IQLQEK+ T GR+R + AIGI D +K Y
Sbjct: 109 DLDADALDSLIQLQEKLHATMGRKRAKGAIGIHDLAMLKGDTVDGDGTAARSLTYTGIDP 168
Query: 161 KTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSEL 220
+ FVPL + E T ++L +H G Y L+ D YP + D G + S PP+IN
Sbjct: 169 DGDTFVPLDDDAERTPADVLTEHPTGETYADLLADHDTYPAIYDDIG-LFSFPPVINGRR 227
Query: 221 TGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTP 280
T VTT+++++F+++TG D + ++ AL RG I V V Y D E+ PD
Sbjct: 228 T-EVTTDSRELFVELTGTDQWTIDRMCAIICYALDARGATIEDVTVDYPDRELHRPDFAV 286
Query: 281 KRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLE 340
+ V + I L G++ E + +L ER D + P +R D+ H DV++
Sbjct: 287 RTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPTDDGYDVEIPPYRVDVRHPVDVVD 346
Query: 341 DVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKK 400
D+ AY +N++ P P + G E ++R +VG G ++++ FN+T++ F +
Sbjct: 347 DLGRAYDFNDLTPRYPDVNTIGGRTESSRLERSVRQALVGLGFEDLLNFNMTSEAENFDR 406
Query: 401 MNI-PEEEIV------EIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLAT 453
M + P+ + V IA P SQ ++ LR W LPSL L NTH YPQ + EVG A
Sbjct: 407 MRLTPDHDAVGAAQPATIAEPYSQDFTILRTWALPSLAMVLETNTHHAYPQDLAEVGFAA 466
Query: 454 LIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRV 513
D +T +A LA ++ ++ +AK L +L V E T H SFI GR
Sbjct: 467 HADGDTQTGVAERRTVAAVLARNDASYEDAKARLQALCDEFAVALETPPTTHPSFIDGRA 526
Query: 514 GKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRPL 553
+ ++G+ G+IGE+HP V+ ++EVPV FE L L
Sbjct: 527 ATIEIDGQPAGVIGELHPGVIVEHDVEVPVAGFEFELDAL 566
>pir||E72457 probable phenylalanyl-tRNA synthetase beta chain APE2305 -
Aeropyrum pernix (strain K1) >gi|5106006|dbj|BAA81317.1|
(AP000064) 548aa long hypothetical phenylalanyl-tRNA
synthetase beta chain [Aeropyrum pernix]
Length = 548
Score = 275 bits (696), Expect = 9e-73
Identities = 191/562 (33%), Positives = 297/562 (51%), Gaps = 30/562 (5%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLW 60
MP V + LE L G S+ E E+L+ KCE+++ E G + +++ +RPD++
Sbjct: 1 MPVIRVRRERLESLTG--LSIGELEELLFRLKCEVEE--PEEGVLEVEVNP---DRPDMY 53
Query: 61 SAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDSLS 120
EG+AR ++ G++ G E+ ++ + + V+ + RPY A+V G+N+DE L
Sbjct: 54 IGEGIARAVKGIAGVEEGWDPPELADTPLSLRVERVPQ--RPYIAAAVVYGVNVDELFLE 111
Query: 121 QMIQLQEKVALTFGRRRREVAIGIFDFEKV-KPPIYYRAAEKTEKFVPLGFE-EELTLEE 178
++IQ QEK+ + GRRR ++AIG D K+ + YR + PLG+ E++ E
Sbjct: 112 ELIQFQEKLHDSLGRRRAKIAIGFHDLAKLPSASVEYRLMTLDTRMKPLGYGGSEMSFRE 171
Query: 179 ILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGW 238
L EKG YG L +P L+ S G V++ PP+INSE+T RV T+ +FIDVTG
Sbjct: 172 FLLADEKGSLYGGLATKDNSHPFLL-SGGEVIAAPPVINSEIT-RVEPGTRDLFIDVTGT 229
Query: 239 DLKKVMLALNVMVTALAERGGKIRSVKVIYKDFEIV---TPDLTPKRFEVELNYIRKLSG 295
+ V L+++V +LAER G R +V + V TP L+ +++ + K G
Sbjct: 230 SAELVAKTLDIIVASLAEREGA-RVGRVRLEGPGAVWASTPLLSEAAAKLDPGTVSKALG 288
Query: 296 LDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEE 355
+DL EE L RM ++ G + P FR DI+ D++ED+ I+ GY + P
Sbjct: 289 VDLTPEEAALHLRRMRHNASPAGGLVNVRVPPFRVDILGEVDLVEDIAISIGYEALGPRW 348
Query: 356 PKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQ----FKKMNIPEEEIVEI 411
P G A++DL+VG G E++ LT+ + F M VE+
Sbjct: 349 PGKFHGGSLRWETHVYRAVKDLLVGLGFTEVLQLVLTSPRLVEAAGFSSM------AVEV 402
Query: 412 ANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAV 471
NPV Q +S LR LL +L++ L N H P ++FE G A +++ E KLA+
Sbjct: 403 LNPVQQEYSVLRPTLLITLLQTLRENQHRRKPVKVFEAGNAVYLEDGEPR---DEEKLAL 459
Query: 472 ALAGSEYTFTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHP 531
+ E F + + L +++R +GV++E+EE H F+ GR V V G+ +G IGE+ P
Sbjct: 460 GVLDEEAGFEDVQAPLYAVLRIMGVDFEVEEASHPMFMEGRTAAVKVGGERLGYIGEVKP 519
Query: 532 QVLENWNIEVPVVAFEIFLRPL 553
+VLE + +E PV A EI L L
Sbjct: 520 EVLEAFGLEYPVAAAEISLEVL 541
>pir||T38232 phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain [similarity] -
fission yeast (Schizosaccharomyces pombe)
>gi|2879800|emb|CAA16986.1| (AL021813) phenylalanyl-trna
synthetase, alpha chain, cytoplasmic
[Schizosaccharomyces pombe]
Length = 589
Score = 255 bits (645), Expect = 8e-67
Identities = 183/589 (31%), Positives = 291/589 (49%), Gaps = 43/589 (7%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENG------KVYFKLDSKDT 54
MP K +L + +GR ++ +E+++L ELD+ + + K+D
Sbjct: 1 MPTISCDKEELYKALGREYTTQEFDELCFQFGIELDEDTTNDPERSPSERPSLKIDIP-A 59
Query: 55 NRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNL 114
NR D+ EG+A+ + + P+Y++ S + + + +RPY AI+ G+ L
Sbjct: 60 NRYDMLCLEGIAQALN-VFNRRMATPQYKLLPSTTSLTISPETSEIRPYAAAAILRGVKL 118
Query: 115 DEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTE-KFVPLGFEEE 173
D I LQ+K+ R R VAIG DF ++ P Y A + E FVPL +E
Sbjct: 119 DPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQE 178
Query: 174 LTLEEILE--KHEKGI-EYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKK 230
+ +LE K K + Y H+I + P YP+++D++ V S+PPIINSE + +++ +T+
Sbjct: 179 INGSNLLEFYKDSKHLSRYLHIIANSPRYPVILDAKRRVCSLPPIINSEFS-KISVDTRD 237
Query: 231 VFIDVTGWDLKKVMLALNVMVTALA---ERGGKIRSVKVI--YKDFEIVTPDLTPKRFEV 285
+FIDVT D K+ + +N+M T + E I V +I + VTP+L P F+
Sbjct: 238 IFIDVTATDKTKLEIVVNMMTTMFSCYCEEPFTIEPVNIISEHNGCTRVTPNLNPTCFKA 297
Query: 286 ELNYIRKLSGLDLKDEEIKELLERMMYSVE--LEDGKAKLLY-PAFRDDIMHARDVLEDV 342
+++Y+ + GL L ++EI LL RMM + + D K L+Y P R DI+H D++ED+
Sbjct: 298 DIDYLNEACGLSLPEDEICHLLTRMMLTAKPNPNDSKTLLVYVPPLRADILHQCDIMEDL 357
Query: 343 LIAYGYNNIEPEEPKLAVQGRGDPFK--DFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKK 400
IAYGY+N++ P +V G PF+ D IR+ + G E+M F L + + +
Sbjct: 358 GIAYGYDNLKHTYPAHSVT-FGKPFEVNRLADIIRNEVAYAGWSEVMPFILCSHDENYAW 416
Query: 401 M-NIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESR 459
+ + + V++ANP + + +R LLP +++ + N + P +IFEV D SR
Sbjct: 417 LRKTDDSKAVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALPIKIFEVSDVAFCDYSR 476
Query: 460 ETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHL------------GVEYEIEETEHGS 507
E T +E L AG F +LD +M L V Y IE + +
Sbjct: 477 ERMTRNERHLCAIFAGLNSGFEQIHGLLDRVMLMLNTKRIMNPKDSDAVGYWIEAEDDST 536
Query: 508 FISGRVGKVLVN------GKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
F GR V G VG+ G +HP VLE + + A EI L
Sbjct: 537 FFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEIDL 585
>gb|AAF21173.1|AC010926_25 (AC010926) putative phenylalanyl-tRNA synthetase beta-subunit;
PheHB; 86609-90570 [Arabidopsis thaliana]
Length = 598
Score = 254 bits (641), Expect = 2e-66
Identities = 177/598 (29%), Positives = 294/598 (48%), Gaps = 56/598 (9%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENG----------------K 44
MP V + L +G S++ E++E+L ELDDV E +
Sbjct: 1 MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEE 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEV----KESDVVVYVDEKLKNV 100
+ +K++ NRPDL EG+A+ +R + Q +P Y + K+ + + V + +
Sbjct: 61 IIYKIEIP-ANRPDLLCLEGLAQSLRVFIEKQE-IPTYTLADISKDKILQMNVKPETSKI 118
Query: 101 RPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAE 160
RP+ V A++ G+ DE + I LQ+K+ RRR VAIG D + ++ P Y A
Sbjct: 119 RPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALP 178
Query: 161 KTE-KFVPLGFEEELTLEEILEKHEKGI---EYGHLIKDKPHYPLLVDSEGNVLSMPPII 216
T+ FVPL + +E++E ++ + ++ H+I++ P +P+L DS+ VLS+PPII
Sbjct: 179 PTDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPII 238
Query: 217 NSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE---RGGKIRSVKVIYKDFE- 272
N + +T +TK VFI+ T DL K + LN MVT +E R +I V+V Y D +
Sbjct: 239 NGAHSA-ITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKS 297
Query: 273 IVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGK-----AKLLYPA 327
+ PDL EV L++I G+ LK E++ LL RM E K+ P
Sbjct: 298 YIYPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPP 357
Query: 328 FRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIM 387
R D++H DV+EDV IAYG+NNI +P + + D +R + E++
Sbjct: 358 SRSDVLHPCDVMEDVAIAYGFNNIPTRKP---ASIKPLTLNELTDLLRIEIAMCVYTEVV 414
Query: 388 TFNLTNKEVQFKKMNIPE-EEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRI 446
T+ L + + F +N + V + NP S + A+R+ L+P L++ + +N P +I
Sbjct: 415 TWLLCSHKENFAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVGHNNKYPKPIKI 474
Query: 447 FEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE--------- 497
FE+ ++DES++ + LA G+ F ++D +M + +
Sbjct: 475 FEISDVVMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNV 534
Query: 498 -------YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
Y ++ ++ F+ GR ++V GK +G G +HP+VL N++I P E+
Sbjct: 535 PINEKDGYYVKLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLEL 592
>gb|AAF97193.1|AF268611_17 (AF268611) phenylalanyl-tRNA synthetase beta subunit [uncultured
marine group II euryarchaeote 37F11]
Length = 524
Score = 249 bits (630), Expect = 5e-65
Identities = 148/499 (29%), Positives = 261/499 (51%), Gaps = 38/499 (7%)
Query: 79 LPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLDEDS-----LSQMIQLQEKVALTF 133
L + + +S + + VD +LK +RP + A+V+GL + +DS + ++ QEK+
Sbjct: 20 LEDLALTDSGIEITVDPELKTIRPIILGAVVKGLQMKDDSEMDSFIKNLMDHQEKLHFAL 79
Query: 134 GRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLI 193
GR RR +IG+ D ++ P RA +T F+PL + E+ +E IL +H KG++Y HL+
Sbjct: 80 GRGRRRASIGVHDLNSIQAPFSVRAVPRTHSFIPLATDTEMDIETILSQHPKGVDYAHLL 139
Query: 194 KDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTA 253
P++ D+ G+VLS PPIIN T V + T+ +FIDVTGWD + L ++
Sbjct: 140 DGMEKVPVIEDATGSVLSFPPIINGSHT-TVHSGTRDLFIDVTGWDRRACESCLMLVALQ 198
Query: 254 LAERGGKIRSVKVI-YKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERM-- 310
+RGG+I+SV + + + P+ TP + + ++ + G +L D+E+K + RM
Sbjct: 199 AKQRGGEIQSVNLTDCNGRQEIVPNWTPVQHRIPERLVKTILGRELTDDEMKHSITRMGG 258
Query: 311 ---------------MYSVE-LEDGKAKLLY--PAFRDDIMHARDVLEDVLIAYGYNNIE 352
+S++ DG+ L + P +R DI+H D++ED+ I +G+ ++
Sbjct: 259 KFVRRDAARPEEIQIGHSMQYAHDGENMLCFEMPRWRFDILHPVDIVEDLAIGHGFEDLG 318
Query: 353 PEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMN-IPEEEIVEI 411
+ P+ + + IR + G +I + L+N+ QF++M P EI +I
Sbjct: 319 EDVPRAPMNAIPRSDEHLRRRIRTSLQGMSFMQIQSLTLSNEFDQFERMRWTPTNEITQI 378
Query: 412 ANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAV 471
NP++Q + +R++LLP L+ L+ N H + PQ ++E+G ++ E +LA
Sbjct: 379 TNPITQEHTMMRQFLLPGLLRLLATNRHHDLPQSVYELGTVVRDHKNME-------RLAF 431
Query: 472 ALAGSEYTFTNAKEILDSLMRHLGVEYEIEE---TEHGSFISGRVGKVLVNGKEVGIIGE 528
A F + + + +R +G + + E G +++GR KVL+ G+ VG GE
Sbjct: 432 ITAERSGGFAAIRGRIQAFLRDMGADEVVIEPLPDNEGPWLAGRAAKVLIKGEWVGCFGE 491
Query: 529 IHPQVLENWNIEVPVVAFE 547
I P + + + + VP+ A E
Sbjct: 492 IDPAIGQTFELLVPMNAAE 510
>pir||T21245 hypothetical protein F22B5.9 - Caenorhabditis elegans
>gi|3876233|emb|CAA90360.1| (Z50044) similar to
phenylalanyl-tRNA synthetase~cDNA EST EMBL:T01401 comes
from this gene~cDNA EST yk303c5.3 comes from this
gene~cDNA EST yk303c5.5 comes from this gene~cDNA EST
yk452d5.3 comes from this gene~cDNA EST yk452d5.5 comes
from this gene [>
Length = 591
Score = 247 bits (624), Expect = 2e-64
Identities = 184/596 (30%), Positives = 294/596 (48%), Gaps = 51/596 (8%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE----------------NGK 44
MP + K L++ R +S +E+++L ELD++ E N +
Sbjct: 1 MPTVGIKKVILDKHFKRVYSEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQ 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVV------VYVDEKLK 98
+K+D NR DL S EG+AR IR + +P K +DV + V ++
Sbjct: 61 EVYKIDIP-ANRYDLLSVEGLARAIRI---FKQEIPSPAYKYADVPKTGLQKIIVKKETA 116
Query: 99 NVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA 158
VRP+ V A++ ++ D DS + I LQ+K+ R+R VAIG D + ++ P YRA
Sbjct: 117 QVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRA 176
Query: 159 -AEKTEKFVPLGFEEELTLEEIL-----EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSM 212
A K KF PL +E T EE++ + H K Y +I++ P YP++ D G V SM
Sbjct: 177 EAPKDIKFKPLNQTKEYTAEELMTLYSTDSHLKA--YLPIIQNHPVYPVIYDKNGVVCSM 234
Query: 213 PPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGK---IRSVKVIYK 269
PPIIN E ++T TK VFI+ T D +K + L+ +VT ++ K I V+V+Y+
Sbjct: 235 PPIINGE-HSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTIEQVEVVYE 293
Query: 270 DFEI--VTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKA-KLLYP 326
+ + + P L+ + V I G++LKDEE+ LL +M E+ + K++ P
Sbjct: 294 ETGVKELYPLLSYREMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVAAKETLKIVVP 353
Query: 327 AFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEI 386
R DI+HA D+ EDV +A+GYNN+ + P+ P D +R + G E
Sbjct: 354 PTRHDILHACDIAEDVGVAFGYNNLITKLPESNTVAVAFPINKLCDNLRIEIAAAGWTEA 413
Query: 387 MTFNLTNKEVQFKKMNIPE--EEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ 444
+ F L +++ K+ P+ V I NP + + R LLP L++ LS+N P
Sbjct: 414 LNFALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTLSSNRDMPLPL 473
Query: 445 RIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHL-------GVE 497
++FE+ + D + + +E +LA F + LD +MR L G
Sbjct: 474 KLFELQDVIVKDSNTDVGARNERRLAAVYYNRAAGFEIIQGFLDRIMRMLNVNPARDGTG 533
Query: 498 YEIEETEHGSFISGRVGKVL-VNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
Y IE E+ ++ GR K++ G +G IG +HP+V+ ++ + +P A EI + P
Sbjct: 534 YYIEADENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEINVEP 589
>pir||T18243 phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain [similarity] -
yeast (Candida albicans) >gi|3859677|emb|CAA22014.1|
(AL033503) phenylalanyl-tRNA synthetase [Candida
albicans]
Length = 592
Score = 247 bits (623), Expect = 3e-64
Identities = 177/589 (30%), Positives = 291/589 (49%), Gaps = 44/589 (7%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELD-----DVWEENGKVYFKLDSKDTN 55
MP V K DL +L+GRS++ EE+++L ELD DV + + K++ N
Sbjct: 1 MPTIPVDKEDLFKLLGRSYTTEEFDELCFQFGIELDEDTTEDVKGTDERPQLKIEVP-AN 59
Query: 56 RPDLWSAEGVARQIRWALGLQSGLPEYEVKES--DVVVYVDEKLKNVRPYGVYAIVEGLN 113
R D+ EG+A+ + LG S P Y++ S ++ + + E +R Y AI+ +N
Sbjct: 60 RYDMLCIEGIAQALNEFLGNTSA-PNYKLSPSKPEISLTIKESTYPIRQYAASAILRNVN 118
Query: 114 LDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA-AEKTEKFVPLGFEE 172
LDE + I LQ+K+ R R VAIG D + + PP Y A A K F PL +
Sbjct: 119 LDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLTPPFTYEALAPKDIVFKPLNQTK 178
Query: 173 ELTLEEILEKHEKGIEYG---HLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETK 229
E+ EE++E +EK G H+IKD P YP+++D+ V S+PPIINS+ ++T TK
Sbjct: 179 EINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASLPPIINSD-HSKITLNTK 237
Query: 230 KVFIDVTGWDLKKVMLALNVMVTALA---ERGGKIRSVKVI--YKDFEIVTPDLTPKRFE 284
V+IDVTG D K + +N +V + + +I V++I + + V P++TP+ +
Sbjct: 238 NVWIDVTGTDRTKTEIVINQLVAMFSRYCKEPFEIEPVQIISEHNNETRVCPNITPRTAK 297
Query: 285 VELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLL---YPAFRDDIMHARDVLED 341
E++YI GL+ EEI +LL++M + +L P R DI+H D++ED
Sbjct: 298 AEISYINSCVGLNYSGEEISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMED 357
Query: 342 VLIAYGYNNIEPEEPKL-AVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKK 400
V I YGY+N++ +P+ ++ P D +R G E+M L++ + F
Sbjct: 358 VAIGYGYDNLKKTKPQAESLVAAPLPVNKVADILRLASSQAGYLEVMPLTLSSHDENFAW 417
Query: 401 MNIPEE--EIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDES 458
+ ++ + V++ NP + + +R LLP +++ + N P ++FE G L +
Sbjct: 418 LKQKDDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLPIKVFECGDIVLKNPE 477
Query: 459 RETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE------------YEIEE-TEH 505
E ++ A G F + +L +M+ + Y IEE E+
Sbjct: 478 LERGAFNQRNWAALYVGKTSGFEMVQGLLGKIMQTMRTPWLENPSKDQRRGYWIEEDKEN 537
Query: 506 GSFISGRVGKVL------VNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+F GR K+ K +G IG +HP+V+ N++I + EI
Sbjct: 538 TTFFPGRGAKIYFRNADNAEAKAIGSIGVLHPEVMNNFDIPYAASSVEI 586
>sp|O13432|SYFA_CANAL PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN CYTOPLASMIC
(PHENYLALANINE--TRNA LIGASE ALPHA CHAIN) (PHERS)
>gi|2792023|emb|CAA73166.1| (Y12589) phenylalanyl-tRNA
synthetase [Candida albicans]
Length = 593
Score = 244 bits (616), Expect = 2e-63
Identities = 177/590 (30%), Positives = 288/590 (48%), Gaps = 45/590 (7%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELD-----DVWEENGKVYFKLDSKDTN 55
MP V K DL +L+GRS++ EE+++L ELD DV + + K++ N
Sbjct: 1 MPTIPVDKGDLFKLLGRSYTTEEFDELCFQFGIELDEDTTEDVKGTDERPQLKIEVP-AN 59
Query: 56 RPDLWSAEGVARQIRWALGLQSGLPEYEVKES--DVVVYVDEKLKNVRPYGVYAIVEGLN 113
R D+ EG+A+ + LG S P Y++ S ++ + + E +R Y AI+ +N
Sbjct: 60 RYDMLCIEGIAQALNEFLGNTSA-PNYKLSPSKPEISLTIKESTYPIRQYAASAILRNVN 118
Query: 114 LDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA-AEKTEKFVPLGFEE 172
LDE + I LQ+K+ R R VAIG D + + PP Y A A K F PL +
Sbjct: 119 LDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDSLTPPFTYEALAPKDIVFKPLNQTK 178
Query: 173 ELTLEEILEKHEKGIEYG---HLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETK 229
E+ EE++E +EK G H+IKD P YP+++D+ V S+PPIINS+ ++T TK
Sbjct: 179 EINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASLPPIINSD-HSKITLNTK 237
Query: 230 KVFIDVTGWDLKKVMLALNVMVTALA---ERGGKIRSVKVI--YKDFEIVTPDLTPKRFE 284
V+IDVTG D K + +N +V + + +I V++I + + V P++TP+ +
Sbjct: 238 NVWIDVTGTDRTKTEIVINQLVAMFSRYCKEPFEIEPVQIISEHNNETRVCPNITPRTAK 297
Query: 285 VELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLL---YPAFRDDIMHARDVLED 341
E++YI GLD EEI +LL++M + +L P R DI+H D++ED
Sbjct: 298 AEISYINSCVGLDYSGEEISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMED 357
Query: 342 VLIAYGYNNIEPEEP--KLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFK 399
V I YGY+N++ ++ P D +R G E+M L++ + F
Sbjct: 358 VAIGYGYDNLKKDQTLRSKVFSCCPLPVNKVADILRLASSQAGYLEVMPLTLSSHDENFA 417
Query: 400 KMNIPEE--EIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLIDE 457
+ ++ + V++ NP + + +R LLP +++ + N P ++FE G L +
Sbjct: 418 WLKQKDDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLPIKVFECGDIVLKNP 477
Query: 458 SRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE------------YEIEE-TE 504
E ++ A G F + +L +M+ + Y IEE E
Sbjct: 478 ELERGAFNQRNWAALYVGKTSGFEMVQGLLGKIMQTMRTPWLENPSKDQRRGYWIEEDKE 537
Query: 505 HGSFISGRVGKVL------VNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ +F GR K+ K +G IG +HP+V+ N++I + EI
Sbjct: 538 NTTFFPGRGAKIYFRNADNAEAKAIGSIGVLHPEVMNNFDIPYAASSVEI 587
>gi|5032011 phenylalanyl-tRNA synthetase beta-subunit [Homo sapiens]
>gi|4104933|gb|AAD02220.1| (AF042346) putative
phenylalanyl-tRNA synthetase beta-subunit; PheHB [Homo
sapiens]
Length = 589
Score = 235 bits (592), Expect = 1e-60
Identities = 169/595 (28%), Positives = 291/595 (48%), Gaps = 51/595 (8%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE----------------NGK 44
MP V + L + +GR+++ EE+++L ELD++ E +
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIRW------ALGLQSGLPEYEVKESDVVVYVDEKLK 98
V +K+D NR DL EG+ R ++ A + +P+ ++++ + + E+
Sbjct: 61 VLYKIDVP-ANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQK----LIITEETA 115
Query: 99 NVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA 158
+RP+ V A++ + +D I+LQEK+ R+R VAIG D + + P Y A
Sbjct: 116 KIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTA 175
Query: 159 AEKTE-KFVPLGFEEELTLEEIL-----EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSM 212
++ KF PL +E T E++ + H K Y H+I++KP YP++ DS G VLSM
Sbjct: 176 KRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK--HYLHIIENKPLYPVIYDSNGVVLSM 233
Query: 213 PPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE---RGGKIRSVKVIYK 269
PPIIN + + R+T T+ +FI+ TG D K + L+++VT +E + + +V++
Sbjct: 234 PPIINGDHS-RITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFP 292
Query: 270 DFEIVT-PDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVEL--EDGKAKLLYP 326
+ + T P+L ++ V + I K G+ E + +LL RM E+ + + ++ P
Sbjct: 293 NGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIP 352
Query: 327 AFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEI 386
R DI+HA D++ED IAYGYNNI+ PK P + +R M G E
Sbjct: 353 PTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEA 412
Query: 387 MTFNLTNKEVQFKKM--NIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ 444
+TF L ++E K+ +I + V I+NP + + R LLP L++ ++ N P
Sbjct: 413 LTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPL 472
Query: 445 RIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE------- 497
++FE+ + D + + + L F +LD +M+ L V
Sbjct: 473 KLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGG 532
Query: 498 YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
Y I+ +E +F GR ++ G+ VG +G +HP V+ + + +P + EI + P
Sbjct: 533 YVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGP 587
>gb|AAF29136.1|AF161521_1 (AF161521) HSPC173 [Homo sapiens]
Length = 589
Score = 235 bits (592), Expect = 1e-60
Identities = 169/595 (28%), Positives = 291/595 (48%), Gaps = 51/595 (8%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE----------------NGK 44
MP V + L + +GR+++ EE+++L ELD++ E +
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIRW------ALGLQSGLPEYEVKESDVVVYVDEKLK 98
V +K+D NR DL EG+ R ++ A + +P+ ++++ + + E+
Sbjct: 61 VLYKIDVP-ANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQK----LIITEETA 115
Query: 99 NVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA 158
+RP+ V A++ + +D I+LQEK+ R+R VAIG D + + P Y A
Sbjct: 116 KIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTA 175
Query: 159 AEKTE-KFVPLGFEEELTLEEIL-----EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSM 212
++ KF PL +E T E++ + H K Y H+I++KP YP++ DS G VLSM
Sbjct: 176 KRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK--HYLHIIENKPLYPVIYDSNGVVLSM 233
Query: 213 PPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE---RGGKIRSVKVIYK 269
PPIIN + + R+T T+ +FI+ TG D K + L+++VT +E + + +V++
Sbjct: 234 PPIINGDHS-RITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENRFTVEAAEVVFP 292
Query: 270 DFEIVT-PDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVEL--EDGKAKLLYP 326
+ + T P+L ++ V + I K G+ E + +LL RM E+ + + ++ P
Sbjct: 293 NGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIP 352
Query: 327 AFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEI 386
R DI+HA D++ED IAYGYNNI+ PK P + +R M G E
Sbjct: 353 PTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEA 412
Query: 387 MTFNLTNKEVQFKKM--NIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ 444
+TF L ++E K+ +I + V I+NP + + R LLP L++ ++ N P
Sbjct: 413 LTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPL 472
Query: 445 RIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE------- 497
++FE+ + D + + + L F +LD +M+ L V
Sbjct: 473 KLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGG 532
Query: 498 YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
Y I+ +E +F GR ++ G+ VG +G +HP V+ + + +P + EI + P
Sbjct: 533 YVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGP 587
>gb|AAD26855.1|AF123263_1 (AF123263) phenylalanyl tRNA synthetase beta subunit [Mus musculus]
Length = 589
Score = 233 bits (588), Expect = 4e-60
Identities = 169/591 (28%), Positives = 292/591 (48%), Gaps = 43/591 (7%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE---------NGK------- 44
MP V + L + +GR+++ EE+++L ELD++ E +GK
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDV 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIR-WALGLQSGLPEYEVKESDVV-VYVDEKLKNVRP 102
V +K+D NR DL EG+AR ++ + +++ + + + + D+ + + E+ VRP
Sbjct: 61 VLYKIDVP-ANRYDLLCLEGLARGLQVFKERIKAPVYKRVMPKGDIQKLVITEETAKVRP 119
Query: 103 YGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKT 162
+ V A++ + +D I+LQEK+ R+R VAIG D + + P Y A +
Sbjct: 120 FAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPS 179
Query: 163 E-KFVPLGFEEELTLEEIL-----EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPII 216
+ KF PL +E T E++ + H K Y H+I+ KP YP++ DS G VLSMPPII
Sbjct: 180 DIKFKPLNKTKEYTACELMNIYKTDNHLK--HYLHIIESKPLYPVIYDSNGVVLSMPPII 237
Query: 217 NSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGK---IRSVKVIYKDFEI 273
N + ++T T+ +FI+ TG D K + L+++VT +E + +V+V+ + +
Sbjct: 238 NGNHS-KITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKS 296
Query: 274 VT-PDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVEL--EDGKAKLLYPAFRD 330
T P+L ++ V + I K G+ + +LL RM E+ + + ++ P R
Sbjct: 297 STFPELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRA 356
Query: 331 DIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFN 390
D++HA D++ED IAYGYNNI+ PK P + +R M G E +TF
Sbjct: 357 DVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFA 416
Query: 391 LTNKEVQFKK--MNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFE 448
L ++E K ++I + V I+NP + + R LLP L++ ++ N P ++FE
Sbjct: 417 LCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFE 476
Query: 449 VGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE-------YEIE 501
+ + D ++ + L F +LD +M+ L V Y I+
Sbjct: 477 ISDVVVKDSGKDVGAKNYRHLCAVYYSKTPGFEIIHGLLDRIMQLLDVPPGEESGGYMIK 536
Query: 502 ETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
+ +F GR ++ V G+ +G +G +HP V+ + + +P + EI + P
Sbjct: 537 ASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEP 587
>dbj|BAA95608.1| (D84430) phenylalanyl tRNA synthetase [Homo sapiens]
Length = 589
Score = 231 bits (583), Expect = 2e-59
Identities = 168/595 (28%), Positives = 290/595 (48%), Gaps = 51/595 (8%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE----------------NGK 44
MP V + L + +GR+++ EE+++L ELD++ E +
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60
Query: 45 VYFKLDSKDTNRPDLWSAEGVARQIRW------ALGLQSGLPEYEVKESDVVVYVDEKLK 98
V +K+D NR DL EG+ R ++ A + +P+ ++++ + + E+
Sbjct: 61 VLYKIDVP-ANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQK----LIITEETA 115
Query: 99 NVRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA 158
+RP+ V A++ + +D I+LQEK+ R+R VAIG D + + P Y A
Sbjct: 116 KIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTA 175
Query: 159 AEKTE-KFVPLGFEEELTLEEIL-----EKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSM 212
++ KF PL +E T E++ + H K Y H+I++KP YP++ DS G VLSM
Sbjct: 176 KRPSDIKFKPLNKTKEYTACELMNIYKTDNHLK--HYLHIIENKPLYPVIYDSNGVVLSM 233
Query: 213 PPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE---RGGKIRSVKVIYK 269
PPIIN + + R+T T+ +FI+ TG D K + L+++VT +E + + +V++
Sbjct: 234 PPIINGDHS-RITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFP 292
Query: 270 DFEIVT-PDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVEL--EDGKAKLLYP 326
+ + T P+L ++ V + I K G+ E + +LL RM E+ + + ++ P
Sbjct: 293 NGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIP 352
Query: 327 AFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEI 386
R DI+HA D++ED IAYGYNNI+ PK P + +R M G E
Sbjct: 353 PTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEA 412
Query: 387 MTFNLTNKEVQFKKM--NIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ 444
+TF L ++E K+ +I + V I+NP + + R LLP L++ ++ N P
Sbjct: 413 LTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPL 472
Query: 445 RIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE------- 497
++FE+ + D + + + L F +LD +M+ L V
Sbjct: 473 KLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGG 532
Query: 498 YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
Y I+ +E +F GR ++ + VG +G +HP V+ + + +P + EI + P
Sbjct: 533 YVIKASEGPAFFPGRCAEIFARVQSVGKLGVLHPDVITKFELTMPCSSLEINIGP 587
>gb|AAF56268.1| (AE003747) CG5706 gene product [Drosophila melanogaster]
Length = 589
Score = 231 bits (582), Expect = 2e-59
Identities = 164/592 (27%), Positives = 285/592 (47%), Gaps = 45/592 (7%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEE-----------------NG 43
MP V + L +G++++ +E++DL ELD+V E +
Sbjct: 1 MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASE 60
Query: 44 KVYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGL--PEYEVKE--SDVVVYVDEKLKN 99
++ +++D NR DL EG+ + L Q L P+++ E V+ +D
Sbjct: 61 EIIYRIDIP-ANRYDLLCLEGLVTGL---LVFQGKLKPPKFQFVELAKRQVLKIDPSTAQ 116
Query: 100 VRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAA 159
+RPY V A++ + + S + I LQ+K+ R+R VAIG D + ++ P Y A
Sbjct: 117 IRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEAL 176
Query: 160 EKTE-KFVPLGFEEELTLEEILE---KHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPI 215
+ KF PL +E+T E+++ H + +Y +I++ P YP++ D+ VLS+PPI
Sbjct: 177 APDQIKFKPLNQTKEMTGSELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPI 236
Query: 216 INSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGKIRSVK---VIYKDFE 272
IN + + ++T +TK VFI+ T D K + L+ +V +E + +V+ V+ D
Sbjct: 237 INGDHS-KITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGS 295
Query: 273 IVT-PDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDD 331
+++ P+L + + + G+D E++ ++L RM +++ + P R D
Sbjct: 296 VISYPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHD 355
Query: 332 IMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNL 391
++HA D+ EDV IAYGYNNI+ P + P + +R+ + G E +TF L
Sbjct: 356 VIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQLREQVAQAGFTEALTFTL 415
Query: 392 TNKEVQFKKM--NIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEV 449
+++ +K+ NI V I NP + + +R LLP L++ L N P ++FE+
Sbjct: 416 CSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLPLKLFEI 475
Query: 450 GLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE---------YEI 500
+ DES E +E ++ F +LD +M+ L V Y +
Sbjct: 476 SDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKSASGTKGYYL 535
Query: 501 EETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRP 552
+ TE S+ GR V+ +G +G IG +HP VL+ + + P A E + P
Sbjct: 536 QATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVEFTIEP 587
>gi|6323089 Phenylalanyl-tRNA synthetase, alpha subunit, cytoplasmic; Frs1p
[Saccharomyces cerevisiae]
>gi|1711628|sp|P15624|SYFA_YEAST PHENYLALANYL-TRNA
SYNTHETASE ALPHA CHAIN CYTOPLASMIC (PHENYLALANINE--TRNA
LIGASE ALPHA CHAIN) (PHERS) >gi|2144558|pir||YFBYBC
phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain,
cytosolic [validated] - yeast (Saccharomyces cerevisiae)
>gi|1181281|emb|CAA64307.1| (X94607) phenylalanyl-tRNA
synthetase alpha subunit [Saccharomyces cerevisiae]
>gi|1360406|emb|CAA97591.1| (Z73232) ORF YLR060w
[Saccharomyces cerevisiae]
Length = 595
Score = 224 bits (566), Expect = 2e-57
Identities = 159/584 (27%), Positives = 289/584 (49%), Gaps = 49/584 (8%)
Query: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELD-DVWEENGKV----YFKLDSKDTN 55
MP V+K L L+G++++ +E+++L E+D D EE K KLD N
Sbjct: 1 MPTVSVNKQQLFDLLGKNYTSQEFDELCFEFGMEMDEDTTEEALKTGEEPELKLDIS-AN 59
Query: 56 RPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKNVRPYGVYAIVEGLNLD 115
R DL EG+++ + L + P+Y++ + + +D+ + +RP+ A++ + L+
Sbjct: 60 RYDLLCIEGISQSLNEYLERKER-PDYKLSKPTTKLIIDKSTEQIRPFATAAVLRNIKLN 118
Query: 116 EDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRA-AEKTEKFVPLGFEEEL 174
E S + I LQ+K+ R R VA+G D + ++ P +YRA K KFVPL +E
Sbjct: 119 EKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFHYRALPPKDIKFVPLNQTQEF 178
Query: 175 TLEEILEKHEKGIE------YGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTET 228
T ++++E ++ + Y H+I+D P +P+++DS+ V S+PP+INSE +++ T
Sbjct: 179 TGDKLIEFYKSPEQKNNIGRYVHIIEDSPVFPVIMDSKDRVCSLPPLINSE-HSKISVNT 237
Query: 229 KKVFIDVTGWDLKKVMLALNVMVTALA---ERGGKIRSVKVI--YKDFEIVTPDLTPKRF 283
+ + ID+T D K + LN++ T + + + V+++ + + P+ +
Sbjct: 238 RNILIDITATDKTKAEIVLNILTTMFSRYCDEPFTVEPVEIVSEHNGQSRLAPNFNDRIM 297
Query: 284 EVELNYIRKLSGLDLKDEEIKELLERM-MYSVELEDGKAKLL--YPAFRDDIMHARDVLE 340
+V + YI GLD +EI L++M +++V+ ++ K L P R DI+HA D++E
Sbjct: 298 DVSIKYINSCLGLDQSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIME 357
Query: 341 DVLIAYGYNNIEPEEPKLA---VQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQ 397
D + YG+NN+ P+ KL+ + P D R E++ L + +
Sbjct: 358 DAAVGYGFNNL-PKGEKLSNANFIAKPLPINKVSDIFRVASSQATWVEVLPLTLCSHDEN 416
Query: 398 FKKMNIPE--EEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLI 455
FK + + + V++ANP + + +R LLP +++ + N P ++FE G
Sbjct: 417 FKFLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLPIKVFETGDVVFK 476
Query: 456 DESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE-------------YEIEE 502
D+ E K +E A G F + +L +M+ E Y IEE
Sbjct: 477 DDKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIEE 536
Query: 503 TEH-GSFISGRVGKVLVNGKE------VGIIGEIHPQVLENWNI 539
+ ++ GR KV+ KE +G +G +HP+V+ N+++
Sbjct: 537 DDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNFDV 580
>emb|CAC11691.1| (AL445064) phenylalanyl-tRNA synthetase beta chain related protein
[Thermoplasma acidophilum]
Length = 543
Score = 217 bits (547), Expect = 3e-55
Identities = 158/526 (30%), Positives = 261/526 (49%), Gaps = 39/526 (7%)
Query: 40 EENGKVYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLKN 99
+E K+ F D RPDL+S + +QI+ + + + ++++ V V V + +++
Sbjct: 37 DEELKIEFNPD-----RPDLFSFPTLMKQIKIFFYGEVEIRKPQIRDDAVKVTVSKGVRD 91
Query: 100 VRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAA 159
+RPY I EG ++ ++I QE + + G+ R ++AIGI D EK I+Y
Sbjct: 92 IRPYFSALIAEGSSIGVH-FDELINYQEILHASIGKDRSKMAIGIHDLEKTGDSIHYTTV 150
Query: 160 EKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSE 219
+ ++ E T++ I++ HEKGI YG L+ + D+EGN+LS+PPI+NS
Sbjct: 151 SRNQRMQTYDGMEG-TVDWIIKNHEKGIAYGRLLPGTGRSVAITDNEGNILSLPPIVNS- 208
Query: 220 LTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGGKIRSVKVI---YKDFEIVTP 276
R+ TKK F+D+TG DL V A ++M + +IR+ + ++ EI+
Sbjct: 209 YRSRIDEGTKKFFVDITGTDLNSVKFAHHLMSNFFSSLKYRIRTPSIDGLPSRETEIIRA 268
Query: 277 D----LTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDI 332
+ P R +E + G + EE L RM Y E + + P +R D+
Sbjct: 269 FDFRIMRPARRSIE-----RYLGEKMDSEETITHLRRMGYVAEPGYPEIAVYVPGYRVDV 323
Query: 333 MHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPF--KDFEDAIRDLMVGFGLQEIMTFN 390
M D++ED+L + G NIE E ++ + G+P +D RD M+G G QE+MTF
Sbjct: 324 MGEADIIEDILKSKGIENIE--EKQIFIGKFGEPLFMNKVKDLARDTMIGLGFQEVMTFV 381
Query: 391 LTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVG 450
L+ + V I NP S+ +S +R + P L++ ++ N PQRIFE+G
Sbjct: 382 LSPASYLQEYTG-----GVRIQNPKSEDYSVIRDKIYPDLLDLIARNKKHSLPQRIFEIG 436
Query: 451 LATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEYE--IEETEHGSF 508
+ + R L+ +A + F+ AK + + E + + +GS
Sbjct: 437 DKIVGGKQRTA-------LSCVIADTRSEFSTAKSYMQGFLARFTSENPVIVPQMIYGS- 488
Query: 509 ISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRPLY 554
I GR G + + K +G+IGEIHP LE +++ VPV FEI L ++
Sbjct: 489 IDGRSGSIKIGEKIIGVIGEIHPAFLERFSLAVPVSFFEIDLDEIF 534
>gb|AAA35151.1| (J03964) Phe-RNA synthetase [Saccharomyces cerevisiae]
Length = 383
Score = 133 bits (331), Expect = 6e-30
Identities = 96/370 (25%), Positives = 176/370 (46%), Gaps = 35/370 (9%)
Query: 203 VDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALA---ERGG 259
+DS+ V S+PP+INSE + +++ T+ + ID+T D K + LN++ T + +
Sbjct: 1 MDSKDRVCSLPPLINSEHS-KISVNTRNILIDITATDKTKAEIVLNILTTMFSRYCDEPF 59
Query: 260 KIRSVKVI--YKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERM-MYSVEL 316
+ V+++ + + P+ + +V + YI GLD +EI L++M +++V+
Sbjct: 60 TVEPVEIVSEHNGQSRLAPNFNDRIMDVSIKYINSCLGLDQSADEIAHCLKKMSLHAVQS 119
Query: 317 EDGKAKLLY--PAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQG---RGDPFKDFE 371
++ K L P R DI+HA D++ED + YG+NN+ P+ KL+ + P
Sbjct: 120 KEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNL-PKGEKLSNANFIAKPLPINKVS 178
Query: 372 DAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEE--IVEIANPVSQRWSALRKWLLPS 429
D R E++ L + + FK + + + V++ANP + + +R LLP
Sbjct: 179 DIFRVASSQATWVEVLPLTLCSHDENFKFLRQSDNDDLAVKLANPKTLEYQVVRTTLLPG 238
Query: 430 LMEFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDS 489
+++ + N P ++FE G D+ E K +E A G F + +L
Sbjct: 239 ILKTVKENRKHSLPIKVFETGDVVFKDDKLERKAYNERHWAAIYVGKNSGFEIIQGLLGK 298
Query: 490 LMRHLGVE-------------YEIEETEH-GSFISGRVGKVLVNGKE------VGIIGEI 529
+M+ E Y IEE + ++ GR KV+ KE +G +G +
Sbjct: 299 IMQTFRTEWIADYGAAASGRGYWIEEDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVL 358
Query: 530 HPQVLENWNI 539
HP+V+ N+++
Sbjct: 359 HPEVMMNFDV 368
>pir||A72330 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain - Thermotoga
maritima (strain MSB8)
>gi|4981353|gb|AAD35904.1|AE001749_7 (AE001749)
phenylalanyl-tRNA synthetase, beta subunit [Thermotoga
maritima]
Length = 788
Score = 126 bits (314), Expect = 5e-28
Identities = 141/569 (24%), Positives = 243/569 (41%), Gaps = 70/569 (12%)
Query: 37 DVWEENGKVYFKLDSKDT-NRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDE 95
+V EE G LD + T NRPD S GVAR++ G P+ +V D V D
Sbjct: 145 NVVEEYGLNERVLDIEITPNRPDCLSIIGVARELSALSGRPLNKPQPDVSFVDEDVQFDV 204
Query: 96 KLKNVRPYGVYA--IVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPP 153
++++V Y+ I++G+ + + L +L VA G+ V
Sbjct: 205 EIEDVEGCPRYSARIMKGVTVKDSPLWMKARL--------------VAAGVRSLNNVVDA 250
Query: 154 IYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHY-----PLLVDSEGN 208
Y E L + I+ K KG E L+ +K + L+ D E N
Sbjct: 251 TNYVMIELGHPVHAFDLNR-LKNKRIVVKSAKGGERVLLLDEKEYELKGGEVLITDGE-N 308
Query: 209 VLSMPPIINSELTGRVTTETKKVFIDVTGWD---LKKVMLALNVMVTA------------ 253
VL++ I+ +G V +T+ + ++V +D ++K AL + +
Sbjct: 309 VLALGGIMGGMESG-VYDDTRDLVLEVAYFDPVRIRKAAKALGISSESSYRFERGVDPND 367
Query: 254 -------LAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKEL 306
LAE K+ V+ K +++ + PK+ + I K+ G K EE ++
Sbjct: 368 VELVSLRLAELIQKLAGGYVLRKFWDVYPRKIEPKKVMLRKARIEKILGT--KVEEPGDI 425
Query: 307 LERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDP 366
L R+ + VE ++L P FR D+ D++E++ YGY +E + + RG
Sbjct: 426 LRRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIYGYEKVESKVISVPAVNRGWG 485
Query: 367 FKD-FEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKW 425
K F I M G G E++TF+ + + + KK + + E + ++NP++ +R
Sbjct: 486 EKQLFRREISQFMKGMGFDEVVTFSFVDSQ-KVKKWPLVDREPIALSNPIASDMDVMRTS 544
Query: 426 LLPSLMEFLSNN-THEEYPQRIFEVGLATLIDES--RETKTISEPKLAVALAGSEYT--- 479
SL++ L+ N + ++FE+G + RE +T+S + G +YT
Sbjct: 545 QFYSLIQVLAENFKRQNRDLKLFEIGKIYFKENGNFREIETLSAMSCGLENPG-DYTDKR 603
Query: 480 ---FTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLEN 536
F K +LD L LGV E R ++ V +E+G IG + P++L+
Sbjct: 604 SVSFYTIKGVLDELFFRLGVNVVYRAAEIPGLFPTRSARIYVENREIGFIGMVDPKLLDE 663
Query: 537 WNIEVPVVAFEIFL---------RPLYQP 556
++++ FEI + RP Y+P
Sbjct: 664 YDVKEDTYFFEIDMELLRKYASKRPAYRP 692
>pir||D82225 phenylalanyl-tRNA synthetase, beta chain VC1220 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655701|gb|AAF94379.1| (AE004202) phenylalanyl-tRNA
synthetase, beta chain [Vibrio cholerae]
Length = 795
Score = 122 bits (304), Expect = 8e-27
Identities = 129/532 (24%), Positives = 229/532 (42%), Gaps = 48/532 (9%)
Query: 54 TNRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDV--VVYVDEKLKNVRPYGVYAIVEG 111
+NR D +S G+AR++ P + + + +D K P + IV+
Sbjct: 164 SNRADCFSIRGLAREVGVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKN 223
Query: 112 LNLDEDSLSQMIQLQEKVALTFGRRRREVAIGI--------------FDFEKVKPPIYYR 157
+N+ + + +QEK+ G R + + I FD K++ I R
Sbjct: 224 VNVQAQT---PLWMQEKLRRC-GIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVR 279
Query: 158 AAEKTEKFVPL-GFEEELTLEE-ILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPI 215
AE+ EK L G E +L + ++ +K + + + H + D++ +L
Sbjct: 280 LAEQDEKLTLLDGSEAKLNADTLVIADQQKALAIAGVFGGE-HSGVSTDTKDVLLECAFF 338
Query: 216 INSELTGRVTT---ETKKVFIDVTGWDLKKVMLALNVMVTALAER-GGKIRSVKVIYKDF 271
+ GR + T G D A+ L E GG + V
Sbjct: 339 APDHIRGRARSYGLHTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAA 398
Query: 272 EIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDD 331
++ P+ R + + KL G + D ++ E+LER+ VE + P +R D
Sbjct: 399 DLPKPNQVALR----RSKLDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFD 454
Query: 332 IMHARDVLEDVLIAYGYNNIEPEEPKLAV-QGRGDPFKDFEDAIRDLMVGFGLQEIMTFN 390
I +D++E+V YGYNNI + P A+ + K +RDL+V G QE +T++
Sbjct: 455 IAIEQDLVEEVGRIYGYNNIPNQAPVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYS 514
Query: 391 LTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ-RIFEV 449
E Q K+ +P + + + NP+S SA+R L+ L+ + +N + P+ R+FE
Sbjct: 515 FVEPEQQ--KLVVPGVDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEY 572
Query: 450 GLATLIDESRETKTISEPKLAVALAGSE-----------YTFTNAKEILDSLMR--HLGV 496
GL + D + E EP LA ++G+ F + K L++++ G
Sbjct: 573 GLRFIPDAAAENGMRQEPMLAGVISGARGEEHWNMETATVDFFDMKGDLEAVLELTAKGK 632
Query: 497 EYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
Y T+H + G+ ++V+GK +G+IG +HP++ + + + FEI
Sbjct: 633 AYSFAATKHPALHPGQAAAIMVDGKAIGVIGTVHPELERKFGLNGRTIVFEI 684
>pir||B70449 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain - Aquifex
aeolicus >gi|2984040|gb|AAC07582.1| (AE000753)
phenylalanyl-tRNA synthetase beta subunit [Aquifex
aeolicus]
Length = 775
Score = 110 bits (272), Expect = 5e-23
Identities = 131/526 (24%), Positives = 234/526 (43%), Gaps = 74/526 (14%)
Query: 55 NRPDLWSAEGVARQIRWALGLQSGLPE---YEVKESDVVVYVDEKLKNVRPYGVYAIVEG 111
NR D+ S GVAR + L PE YE + DE K R GV ++EG
Sbjct: 164 NRGDMLSVRGVARDLSAIFRLPKKKPEEPTYEETGEFFIEIEDEDCKRYR--GV--VIEG 219
Query: 112 LNLDED--------------SLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYR 157
+ + E S++ ++ + V L G+ + FD KV+ I R
Sbjct: 220 VEIKESPLYIKKRLWQCGIKSINNVVDITNYVMLRDGQ-----PLHAFDLSKVEGGIIVR 274
Query: 158 AAEKTEKFVPLGFEEELTLEEILEKHEK-----------GIEYGHLIKDKPHYPLLVDSE 206
+A+K EK + L EE E+IL ++ G+E G IK+ LL +
Sbjct: 275 SAKKGEKIITLDGEERELDEDILVIADREKPLAVAGVIGGLESG--IKENTKDILLESAY 332
Query: 207 GNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMV-TALAERGGKIRSVK 265
N P + + ++ +T+ + D+++V A + V L GGK++ VK
Sbjct: 333 FN-----PFRVRKASKKLGIQTESSYRFERNVDIERVDRAQDYAVYLILKHAGGKVKVVK 387
Query: 266 VIYKDFEIVTPDLTPKR-FEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLL 324
+Y++ PK+ F + YIR +G K+EE+KE+L+ + E+ ++L
Sbjct: 388 DVYRE------KYKPKKVFLPQGKYIR-YAGESYKNEEVKEILDALEIPNEIMRCGVEVL 440
Query: 325 YPAFRD-DIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGL 383
P+ R DI D++E+++ GY + E KL + +KD ++ + GL
Sbjct: 441 VPSHRSFDIQRDVDLIEEIMRVKGYEHYTSETLKL--PSIANLWKDNLLEVKKYLRDKGL 498
Query: 384 QEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLME-FLSNNTHEEY 442
E++ F+ + ++ ++ +N+P E+ E+ NP++ +R L+ SL+ + N+ + Y
Sbjct: 499 TEVINFSFEDSKL-YELLNLPLPEL-EVINPLNPTQRYMRNTLITSLLRTAVYNDRNYNY 556
Query: 443 PQRIFEVGLATLIDESRETKTISEPKLAVALAGSE-YTFTNAK-------EILDSLMRHL 494
Q +FE+G K E +L + L G++ T K EI+ +
Sbjct: 557 DQAVFELGKVFF-------KEGEENRLGILLKGNKPRTLKEEKWEPYDLTEIIAGIFALF 609
Query: 495 GVEYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIE 540
G+E E + G+V + G+ VG G++HP++ + ++
Sbjct: 610 GLEPEFRNAKRNFLHPYVQGEVYLEGEFVGFFGKLHPKIAKELELK 655
>emb|CAA37225.1| (X53057) phenylalanyl-tRNA synthetase beta subunit (AA 1-804)
[Bacillus subtilis]
Length = 804
Score = 101 bits (248), Expect = 3e-20
Identities = 123/545 (22%), Positives = 227/545 (41%), Gaps = 66/545 (12%)
Query: 55 NRPDLWSAEGVARQIRWALGLQSGLPE--YEVKESDVVVYVDEKLKNVRPYGVYA--IVE 110
NR D + GVA ++ L + LP+ Y Y+ K+++ +Y I++
Sbjct: 172 NRADAMNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIK 231
Query: 111 GLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVK--PPIY---YRAAEKTEKF 165
+ + L +L + G R + I +F ++ P++ Y E
Sbjct: 232 NVTIAPSPLWMQTKL-----MNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVV 286
Query: 166 VPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVT 225
V E E+ + L+ E+ + HL V + G + V
Sbjct: 287 VRKAAENEMIVT--LDDQERKLSADHL----------VITNGTKAQAVAGVMGGAESEVQ 334
Query: 226 TETKKVFIDVTGWDLKKVM-----LALNVMVTALAERGGKIRSVKV----------IYKD 270
+TK + ++ ++ +KV L L + E+G V++ +Y
Sbjct: 335 EDTKTILLEAAYFNGQKVRKASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAG 394
Query: 271 FEIVTPDLTPKRFEVELNYIR-------KLSGLDLKDEEIKELLERMMYSVELEDGKAKL 323
E++ + +E N I + GL + EE+ + +R+ ++V D +
Sbjct: 395 GEVLAGTVEEDHLTIEANNIHVSADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVV 454
Query: 324 LYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLA-VQGRGDPFKDFEDAIRDLMVGFG 382
P+ R DI D++E+ YGY+NI P+ A G P++ +R + G G
Sbjct: 455 TVPSRRGDITIEEDLIEEAARLYGYDNIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAG 514
Query: 383 LQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEY 442
L + +T++LTN E + I + +A P+S+ S LR L+P+L++ +S N +
Sbjct: 515 LSQAITYSLTN-EKKATAFAIEKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQT 573
Query: 443 PQ-RIFEVGLATLIDESRETKTISEPKLAVALAG-----------SEYTFTNAKEILDSL 490
++EVG + + + +TK + ++A A+ G F K I++ L
Sbjct: 574 DSVALYEVG-SVFLTKEEDTKPVETERVAGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGL 632
Query: 491 MRHLGVEYEIE--ETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ L V IE ++E GR +L+NG +G IG++HP + + +I+ V FE+
Sbjct: 633 LDKLNVLDSIEFVQSERKQLHPGRTANILLNGSLIGFIGQVHPSLEKELDIKETYV-FEL 691
Query: 549 FLRPL 553
L L
Sbjct: 692 DLHAL 696
>sp|P17922|SYFB_BACSU PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|7428487|pir||YFBSB
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain -
Bacillus subtilis >gi|1770031|emb|CAA99564.1| (Z75208)
phenylalanyl-tRNA synthetase beta subunit [Bacillus
subtilis] >gi|2635328|emb|CAB14823.1| (Z99118)
phenylalanyl-tRNA synthetase (beta subunit) [Bacillus
subtilis]
Length = 804
Score = 101 bits (248), Expect = 3e-20
Identities = 123/545 (22%), Positives = 227/545 (41%), Gaps = 66/545 (12%)
Query: 55 NRPDLWSAEGVARQIRWALGLQSGLPE--YEVKESDVVVYVDEKLKNVRPYGVYA--IVE 110
NR D + GVA ++ L + LP+ Y Y+ K+++ +Y I++
Sbjct: 172 NRADAMNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIK 231
Query: 111 GLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVK--PPIY---YRAAEKTEKF 165
+ + L +L + G R + I +F ++ P++ Y E
Sbjct: 232 NVTIAPSPLWMQTKL-----MNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVV 286
Query: 166 VPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVT 225
V E E+ + L+ E+ + HL V + G + V
Sbjct: 287 VRKAAENEMIVT--LDDQERKLSADHL----------VITNGTKAQAVAGVMGGAESEVQ 334
Query: 226 TETKKVFIDVTGWDLKKVM-----LALNVMVTALAERGGKIRSVKV----------IYKD 270
+TK + ++ ++ +KV L L + E+G V++ +Y
Sbjct: 335 EDTKTILLEAAYFNGQKVRKASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAG 394
Query: 271 FEIVTPDLTPKRFEVELNYIR-------KLSGLDLKDEEIKELLERMMYSVELEDGKAKL 323
E++ + +E N I + GL + EE+ + +R+ ++V D +
Sbjct: 395 GEVLAGTVEEDHLTIEANNIHVSADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVV 454
Query: 324 LYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLA-VQGRGDPFKDFEDAIRDLMVGFG 382
P+ R DI D++E+ YGY+NI P+ A G P++ +R + G G
Sbjct: 455 TVPSRRGDITIEEDLIEEAARLYGYDNIPSTLPETAGTTGGLTPYQAKRRKVRRFLEGAG 514
Query: 383 LQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEY 442
L + +T++LTN E + I + +A P+S+ S LR L+P+L++ +S N +
Sbjct: 515 LSQAITYSLTN-EKKATAFAIEKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQT 573
Query: 443 PQ-RIFEVGLATLIDESRETKTISEPKLAVALAG-----------SEYTFTNAKEILDSL 490
++EVG + + + +TK + ++A A+ G F K I++ L
Sbjct: 574 DSVALYEVG-SVFLTKEEDTKPVETERVAGAVTGLWRKQLWQGEKKPVDFFVVKGIVEGL 632
Query: 491 MRHLGVEYEIE--ETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ L V IE ++E GR +L+NG +G IG++HP + + +I+ V FE+
Sbjct: 633 LDKLNVLDSIEFVQSERKQLHPGRTANILLNGSLIGFIGQVHPSLEKELDIKETYV-FEL 691
Query: 549 FLRPL 553
L L
Sbjct: 692 DLHAL 696
>dbj|BAB06829.1| (AP001517) phenylalanyl-tRNA synthetase beta subunit [Bacillus
halodurans]
Length = 808
Score = 100 bits (246), Expect = 5e-20
Identities = 87/314 (27%), Positives = 148/314 (46%), Gaps = 23/314 (7%)
Query: 237 GWDLKKVMLALNVMVTALAE-RGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSG 295
G D K+V A T +AE GG + V + I P ++ + L ++ + G
Sbjct: 372 GVDPKRVREAAARAATLIAEVAGGTVVGGVVEAGELAIEEPVVS-----LNLPHMNQRLG 426
Query: 296 LDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEE 355
++L +E+ + +R+ ++ +E+ ++ P+ R DI D+ E+V YGY+NI
Sbjct: 427 MELSHDEVAAIFDRLGFAYTVENDTFEVTAPSRRGDIRIEEDLFEEVARLYGYDNIPTTF 486
Query: 356 P-KLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEI-VEIAN 413
P +G ++ IR + G GL E+MT++LT++E + E+ + + +A
Sbjct: 487 PVGGTTRGGLTDYQQKRRKIRRYLEGAGLFEVMTYSLTSEEKEKGLQGENEDYLPIRVAM 546
Query: 414 PVSQRWSALRKWLLPSLMEFLSNNTHEEYPQR-IFEVGLATLIDESRETKTISEPK-LAV 471
P+S+ S +R L+P L++ + N + + I+E+G L E TK E + LA
Sbjct: 547 PMSEERSTMRTSLVPHLLDVVQYNLNRKQEALFIYELGSVFLSKEETLTKQPEEREMLAG 606
Query: 472 ALAG-----------SEYTFTNAKEILDSLMRHLGVEYEI--EETEHGSFISGRVGKVLV 518
AL G F K IL+ + LG+ ++ E E GR V V
Sbjct: 607 ALTGFWTEHLWQGEKKAVDFFVVKGILEGMFAELGLSEKVTFERGEQPGMHPGRTANVKV 666
Query: 519 NGKEVGIIGEIHPQ 532
NG+ VG G+IHP+
Sbjct: 667 NGRAVGFAGQIHPE 680
>emb|CAA23565.1| (V00291) phenylalanyl-tRNA synthetase alpha-subunit (pheT; EC
6.1.1.20) [Escherichia coli]
Length = 795
Score = 92.8 bits (227), Expect = 9e-18
Identities = 125/552 (22%), Positives = 230/552 (41%), Gaps = 66/552 (11%)
Query: 46 YFKLD------SKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEVKES--DVVVYVDEKL 97
Y KLD S NR D GVAR + L +G PE + D + + +
Sbjct: 150 YLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNQLAAGNPEIVPVGATIDDTLPITVEA 209
Query: 98 KNVRPYGVYAIVEGLNLDED---------------SLSQMIQLQEKVALTFGRRRREVAI 142
P + +V+G+N+ S+ ++ + V L G+ +
Sbjct: 210 PEACPRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQ-----PM 264
Query: 143 GIFDFEKVKPPIYYRAAEKTEKFVPL-GFEEELTLEE-ILEKHEKGIEYGHLIKDKPHYP 200
FD ++++ I R A++ E V L G E +L + ++ H K + G + + H
Sbjct: 265 HAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGE-HSG 323
Query: 201 LLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAER--- 257
+ +++ +L +TGR + D + + V AL A R
Sbjct: 324 VNDETQNVLLECAFFSPLSITGRARRHG--LHTDASHRYERGVDPALQHKAMERATRLLI 381
Query: 258 ---GGKIRSVKVIYKDFEIVTPDLTPKRFEVEL--NYIRKLSGLDLKDEEIKELLERMMY 312
GG+ V +I PKR + L + + +L G + DE++ ++L R+
Sbjct: 382 DICGGEAGPV------IDITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGC 435
Query: 313 SVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEP--KLAVQGRGDPFKDF 370
V + + + P++R D+ D++E+V YGYNNI P+EP + + G
Sbjct: 436 EVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNI-PDEPVQRSLIMGTHREADLS 494
Query: 371 EDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSL 430
++ L+ G QE++T++ + +VQ +M P E + + +P+S SA+R L L
Sbjct: 495 LKRVKTLLNDKGYQEVITYSFVDPKVQ--QMIHPGVEALLLPSPISVEMSAMRLSLWTGL 552
Query: 431 M-EFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEY----------- 478
+ + N ++ RIFE GL + D + LA + G+ Y
Sbjct: 553 LATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETV 612
Query: 479 TFTNAKEILDSLMRHLGV--EYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLEN 536
F + K L+S++ G E E + + G+ + + G+ +G +G +HP++
Sbjct: 613 DFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERK 672
Query: 537 WNIEVPVVAFEI 548
++ + FE+
Sbjct: 673 LDLNGRTLVFEL 684
>sp|P27002|SYFB_THETH PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|2781286|pdb|1PYS|B Chain B,
Phenylalanyl-Trna Synthetase From Thermus Thermophilus
>gi|7245470|pdb|1EIY|B Chain B, The Crystal Structure Of
Phenylalanyl-Trna Synthetase From Thermus Thermophilus
Complexed With Cognate Trnaphe >gi|6980403|pdb|1B7Y|B
Chain B, Phenylalanyl Trna Synthetase Complexed With
Phenylalaninyl- Adenylate >gi|7245815|pdb|1B70|B Chain
B, Phenylalanyl Trna Synthetase Complexed With
Phenylalanine >gi|48252|emb|CAA46560.1| (X65609)
phenylalanine--tRNA ligase [Thermus thermophilus]
>gi|48255|emb|CAA78105.1| (Z12118) Phenylalanyl tRNA
Synthetase,beta subunit [Thermus thermophilus]
>gi|2624414|emb|CAA75645.1| (Y15464) phenylalanyl-tRNA
synthetase (beta subunit) [Thermus thermophilus]
Length = 785
Score = 91.3 bits (223), Expect = 3e-17
Identities = 79/287 (27%), Positives = 130/287 (44%), Gaps = 28/287 (9%)
Query: 280 PKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVL 339
P+ Y +L G + E +L+R+ VE E ++ P+ R D+ D++
Sbjct: 401 PEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLV 460
Query: 340 EDVLIAYGYNNIEPEEPKL--AVQGRG--DPFKDFEDAIRDLMVGFGLQEIMTFNLTNKE 395
E+V GY I P A RG P++ E +R+++ G G QE+ T++ + E
Sbjct: 461 EEVARIQGYETIPLALPAFFPAPDNRGVEAPYRK-EQRLREVLSGLGFQEVYTYSFMDPE 519
Query: 396 VQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQR--IFEVGLAT 453
++ + ++ + NP++ +ALR L P L+ L N + P+R +FEVG
Sbjct: 520 -DARRFRLDPPRLL-LLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVG--- 574
Query: 454 LIDESRETKTISEPKLAVALAGSEYTFTNAKE----------ILDSLMRHLGVEYEIEET 503
R + E LA L G AKE L++L LG+ + +E
Sbjct: 575 -----RVFREREETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGLAFRVEAQ 629
Query: 504 EHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
G G+VLV G+EVG +G +HP++ + + PV FE+ L
Sbjct: 630 AFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELELP-PVHLFELRL 675
>pir||S22367 phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain - Thermus
aquaticus
Length = 785
Score = 91.3 bits (223), Expect = 3e-17
Identities = 79/287 (27%), Positives = 130/287 (44%), Gaps = 28/287 (9%)
Query: 280 PKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVL 339
P+ Y +L G + E +L+R+ VE E ++ P+ R D+ D++
Sbjct: 401 PEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLV 460
Query: 340 EDVLIAYGYNNIEPEEPKL--AVQGRG--DPFKDFEDAIRDLMVGFGLQEIMTFNLTNKE 395
E+V GY I P A RG P++ E +R+++ G G QE+ T++ + E
Sbjct: 461 EEVARIQGYETIPLALPAFFPAPDNRGVEAPYRK-EQRLREVLSGLGFQEVYTYSFMDPE 519
Query: 396 VQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQR--IFEVGLAT 453
++ + ++ + NP++ +ALR L P L+ L N + P+R +FEVG
Sbjct: 520 -DARRFRLDPPRLL-LLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVG--- 574
Query: 454 LIDESRETKTISEPKLAVALAGSEYTFTNAKE----------ILDSLMRHLGVEYEIEET 503
R + E LA L G AKE L++L LG+ + +E
Sbjct: 575 -----RVFREREETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGLAFRVEAQ 629
Query: 504 EHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
G G+VLV G+EVG +G +HP++ + + PV FE+ L
Sbjct: 630 AFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELELP-PVHLFELRL 675
>sp|P07395|SYFB_ECOLI PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|2118345|pir||I41284
phenylalanine--tRNA ligase (EC 6.1.1.20) beta-subunit -
Escherichia coli >gi|7428486|pir||SYECFB
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain -
Escherichia coli >gi|146346|gb|AAA51470.1| (K02844)
phenylalanyl-tRNA synthetase beta-subunit [Escherichia
coli] >gi|1742793|dbj|BAA15481.1| (D90813)
Phenylalanine--tRNA ligase (EC 6.1.1.20) b chain
[Escherichia coli] >gi|1742806|dbj|BAA15493.1| (D90814)
Phenylalanine--tRNA ligase (EC 6.1.1.20) b chain
[Escherichia coli] >gi|1788006|gb|AAC74783.1| (AE000266)
phenylalanine tRNA synthetase, beta-subunit [Escherichia
coli K12]
Length = 795
Score = 90.1 bits (220), Expect = 6e-17
Identities = 126/556 (22%), Positives = 231/556 (40%), Gaps = 74/556 (13%)
Query: 46 YFKLD------SKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVVVYVDEKLK- 98
Y KLD S NR D GVAR + + + LP + + V +D+ L
Sbjct: 150 YLKLDDNTIEISVTPNRADCLGIIGVARDV----AVLNQLPLVQPEIVPVGATIDDTLPI 205
Query: 99 -----NVRPYGVYAIVEGLNLDED---------------SLSQMIQLQEKVALTFGRRRR 138
P + +V+G+N+ S+ ++ + V L G+
Sbjct: 206 TVEAPEACPRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQ--- 262
Query: 139 EVAIGIFDFEKVKPPIYYRAAEKTEKFVPL-GFEEELTLEE-ILEKHEKGIEYGHLIKDK 196
+ FD ++++ I R A++ E V L G E +L + ++ H K + G + +
Sbjct: 263 --PMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGE 320
Query: 197 PHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE 256
H + +++ +L +TGR + D + + V AL A
Sbjct: 321 -HSGVNDETQNVLLECAFFSPLSITGRARRHG--LHTDASHRYERGVDPALQHKAMERAT 377
Query: 257 R------GGKIRSVKVIYKDFEIVTPDLTPKRFEVEL--NYIRKLSGLDLKDEEIKELLE 308
R GG+ V +I PKR + L + + +L G + DE++ ++L
Sbjct: 378 RLLIDICGGEAGPV------IDITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILR 431
Query: 309 RMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLA--VQGRGDP 366
R+ V + + + P++R D+ D++E+V YGYNNI P+EP A + G
Sbjct: 432 RLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNI-PDEPVQASLIMGTHRE 490
Query: 367 FKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWL 426
++ L+ G QE++T++ + +VQ +M P E + + +P+S SA+R L
Sbjct: 491 ADLSLKRVKTLLNDKGYQEVITYSFVDPKVQ--QMIHPGVEALLLPSPISVEMSAMRLSL 548
Query: 427 LPSLM-EFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEY------- 478
L+ + N ++ RIFE GL + D + LA + G+ Y
Sbjct: 549 WTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLA 608
Query: 479 ----TFTNAKEILDSLMRHLGV--EYEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQ 532
F + K L+S++ G E E + + G+ + + G+ +G +G +HP+
Sbjct: 609 KETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPE 668
Query: 533 VLENWNIEVPVVAFEI 548
+ ++ + FE+
Sbjct: 669 LERKLDLNGRTLVFEL 684
>pir||A83303 phenylalanyl-tRNA synthetase, beta subunit PA2739 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9948817|gb|AAG06127.1|AE004702_4 (AE004702)
phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas
aeruginosa]
Length = 792
Score = 89.3 bits (218), Expect = 1e-16
Identities = 111/504 (22%), Positives = 220/504 (43%), Gaps = 80/504 (15%)
Query: 92 YVDEKLKNV---RPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFE 148
Y+ ++NV RP ++ + D S+ ++ + V + G+ + FD
Sbjct: 215 YLGRVIRNVDLSRPTPLWMVERLRRSDIRSIDPVVDVTNYVMIELGQ-----PMHAFDLA 269
Query: 149 KVKPPIYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGN 208
++ + R AE EK V L +E+TL L++
Sbjct: 270 EINGGVRVRMAEDGEKLVLLD-GQEITLRADT--------------------LVIADHQR 308
Query: 209 VLSMPPIINSELTGRVTTETKKVFIDVTGWDL-----KKVMLALNVMVTALAERG----- 258
L++ ++ E +G V+ T+ +F++ +D K L+ + ERG
Sbjct: 309 ALAIAGVMGGEHSG-VSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFERGVDSQL 367
Query: 259 ---GKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLE------- 308
R+ ++I +IV + P +V ++ K++ + L+ E + ++L
Sbjct: 368 ARKAMERATRLI---LDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQMLGMPLDAAE 424
Query: 309 --RMMYSVELE-----DGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQ 361
R++ ++EL +G+ + P+ R DI D++E++ YGYN + P+ +
Sbjct: 425 IVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQARLA 484
Query: 362 GRGDP-FKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWS 420
P + +R L+V G QE +TF+ + + F+ + P + + +ANP+S +
Sbjct: 485 PNNKPEARAALPLLRRLLVARGYQEAITFSFIDPAL-FELFD-PGTQPLTLANPISADMA 542
Query: 421 ALRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLATLIDESRETKTISEPKLAVALAGSEYT 479
A+R L P L++ L +N + + + R+FE GL + + K E LA A+ G
Sbjct: 543 AMRSSLWPGLVKALQHNLNRQQSRVRLFESGLR-FVGQLEGLK--QEAMLAGAICGKRLP 599
Query: 480 -----------FTNAKEILDSLMRHLGV--EYEIEETEHGSFISGRVGKVLVNGKEVGII 526
F +AK +++++ G ++ EH + G+ ++ G+ VG +
Sbjct: 600 EGWANGRDGVDFFDAKADVEAVLASAGALGDFSFVPGEHPALHPGQTARIEREGRLVGYL 659
Query: 527 GEIHPQVLENWNIEVPVVAFEIFL 550
G +HP++ + ++E PV FE+ L
Sbjct: 660 GALHPELAKKLDLEQPVFLFELLL 683
>sp|P57230|SYFB_BUCAI PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|10038813|dbj|BAB12848.1|
(AP001118) phenylalanyl-tRNA synthetase beta chain
[Buchnera sp. APS]
Length = 795
Score = 85.0 bits (207), Expect = 2e-15
Identities = 120/547 (21%), Positives = 228/547 (40%), Gaps = 74/547 (13%)
Query: 54 TNRPDLWSAEGVARQIRWALGLQSG------LPEYEVKESDVVVYVDEKLKNVRPYGVYA 107
+NRPD S G++R I L+ +P K+ ++ + D++ N +G
Sbjct: 164 SNRPDGLSILGLSRNIAAINDLRISPLKNRLVPAVIQKKINIDIQADKECMNF--FG--R 219
Query: 108 IVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVP 167
I+E +N++ D+ F +++ + + I+Y E + P
Sbjct: 220 IIENININVDT-------------PFWMKKKLFFSNVLSENIITNIIHYVLIELGQ---P 263
Query: 168 LGFEEELTLEEIL----EKHEKGIEYGHLIKDKPHYPLLVDSEGN-VLSMPPIINSELTG 222
L + + + + +HE+ + + IK + +LV S+ N +LS+P INS +
Sbjct: 264 LNILDADNINDSIIVRMARHEEDLFLKNNIKISLNENILVFSDSNKILSLPGNINSNIVD 323
Query: 223 RVTTETKKVFIDVTGWDLKKVMLALNVM------------VTALAERGGKIRSVKVIYKD 270
V TK +F+ + K + + M V + + +I K
Sbjct: 324 -VDKNTKNIFLSSYLINRKYISYIIKKMNMNTVLEYHYYGVDPFLQNYAIEYATDLILKI 382
Query: 271 FEIVTPDLTPKR--FEVELNY--------IRKLSGLDLKDEEIKELLERMMYSVELEDGK 320
V + K+ F++ N + K+ G + I ++L R+ Y ++ +
Sbjct: 383 CGGVPGPINEKKCNFQIHKNNTIRLHHERLNKIIGFFIDTSVISKILYRLDYQLKFQKTF 442
Query: 321 AKLLYPAFRDDIMHARDVLEDVLIAYGYNNIE--PEEPKLAVQGRGDPFKDFEDAIRDLM 378
++ P++R DI+ DV+ D+L Y YNN+ P + L + + ++
Sbjct: 443 WDVISPSWRFDILIEEDVIGDILRIYEYNNVHLIPLKEFLNCSKKNELTDSLLKKSAVIL 502
Query: 379 VGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLS-NN 437
+ G E++ + + ++Q + P EE + ++NP+SQ S +R L P L++ +S N
Sbjct: 503 INQGYHEVINYGFIDPKIQ--NLIFPNEENLLLSNPISQDMSCMRLSLWPGLLKNISYNK 560
Query: 438 THEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGS-----------EYTFTNAKEI 486
++ RIFE GL ID+ E LA A++G+ + F + K
Sbjct: 561 NRQQKSIRIFESGLCFSIDKRENLGIRQEIFLAAAISGNYIKENWYYNIRKMDFYDLKGD 620
Query: 487 LDSLMRHLGVEYEIE---ETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPV 543
L+S++ + EIE + HG + + +G IG I P++ + N+
Sbjct: 621 LESILESICQLNEIEFRRKKIHG-LHPEQSASIYFRNYLIGSIGAIDPRLEKALNVSSTT 679
Query: 544 VAFEIFL 550
FEI L
Sbjct: 680 FLFEISL 686
>emb|CAB72016.1| (AJ391257) phenylalanine-tRNA-synthetase beta chain [Neisseria
meningitidis]
Length = 694
Score = 85.0 bits (207), Expect = 2e-15
Identities = 62/285 (21%), Positives = 141/285 (48%), Gaps = 27/285 (9%)
Query: 281 KRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLE 340
K+ + L ++ + G+D+ E+++ +L+ + E ++ P+FR DI D++E
Sbjct: 403 KQVGLRLGRLKTVLGVDIPSEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIE 462
Query: 341 DVLIAYGYNNIEPEEPKLAVQGRGDPFKDFED-----AIRDLMVGFGLQEIMTFNLTNKE 395
++ YGY NI P GR + E A+ + M G +E++++ N+
Sbjct: 463 EIGRVYGYENI----PDDYTSGRLKMLELPETRRPRFAVYNEMAARGYREVVSYAFVNE- 517
Query: 396 VQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLATL 454
Q+++ + + + NP++ +++ +R L+ L+E L NN + + + R+FE+ A +
Sbjct: 518 -QWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEI--ARV 574
Query: 455 IDESRETKTISEPKLAVALAGS-----------EYTFTNAKEILDSLMRHLGVEYEIEET 503
+ + + + ++ G+ F + K +++L+++ VE+ +T
Sbjct: 575 FGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKNKAVEF--VKT 632
Query: 504 EHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ + GR ++ +GK +G +GE+HP+ L+ +++ + FEI
Sbjct: 633 GYPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEI 677
>pir||A81940 probable phenylalanyl-tRNA synthetase beta chain NMA0937 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379641|emb|CAB84208.1| (AL162754) putative
phenylalanyl-tRNA synthetase beta chain [Neisseria
meningitidis Z2491]
Length = 787
Score = 85.0 bits (207), Expect = 2e-15
Identities = 62/285 (21%), Positives = 141/285 (48%), Gaps = 27/285 (9%)
Query: 281 KRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLE 340
K+ + L ++ + G+D+ E+++ +L+ + E ++ P+FR DI D++E
Sbjct: 403 KQVGLRLGRLKTVLGVDIPSEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIE 462
Query: 341 DVLIAYGYNNIEPEEPKLAVQGRGDPFKDFED-----AIRDLMVGFGLQEIMTFNLTNKE 395
++ YGY NI P GR + E A+ + M G +E++++ N+
Sbjct: 463 EIGRVYGYENI----PDDYTSGRLKMLELPETRRPRFAVYNEMAARGYREVVSYAFVNE- 517
Query: 396 VQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLATL 454
Q+++ + + + NP++ +++ +R L+ L+E L NN + + + R+FE+ A +
Sbjct: 518 -QWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEI--ARV 574
Query: 455 IDESRETKTISEPKLAVALAGS-----------EYTFTNAKEILDSLMRHLGVEYEIEET 503
+ + + + ++ G+ F + K +++L+++ VE+ +T
Sbjct: 575 FGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKNKAVEF--VKT 632
Query: 504 EHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
+ + GR ++ +GK +G +GE+HP+ L+ +++ + FEI
Sbjct: 633 GYPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEI 677
>pir||C81166 phenylalanyl-tRNA synthetase, beta chain NMB0728 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7225955|gb|AAF41141.1| (AE002427) phenylalanyl-tRNA
synthetase, beta chain [Neisseria meningitidis MC58]
Length = 787
Score = 83.1 bits (202), Expect = 7e-15
Identities = 60/284 (21%), Positives = 139/284 (48%), Gaps = 25/284 (8%)
Query: 281 KRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLE 340
K+ + L+ ++ + G+D+ E+++ +L+ + E ++ P+FR DI D++E
Sbjct: 403 KQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIE 462
Query: 341 DVLIAYGYNNIEPEEPKLAVQGRGDPFKDFED-----AIRDLMVGFGLQEIMTFNLTNKE 395
++ YGY NI P GR + E A+ + M G +E++++ ++
Sbjct: 463 EIGRVYGYENI----PDDYTSGRLKMLELPETRRPRFAVYNEMAARGYREVVSYAFVDE- 517
Query: 396 VQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRIFEVGLATLI 455
Q+++ + + + NP++ +++ +R L+ L+E L NN + + R+ +A +
Sbjct: 518 -QWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQ-NRVCVFEIARVF 575
Query: 456 DESRETKTISEPKLAVALAGS-----------EYTFTNAKEILDSLMRHLGVEYEIEETE 504
+ + + + ++ G+ F + K +++L+++ VE+ +T
Sbjct: 576 SKGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKADVENLLKNKAVEFV--KTG 633
Query: 505 HGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
H + GR ++ +GK +G +GE+HP+ L+ +++ + FEI
Sbjct: 634 HPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEI 677
>sp|P43820|SYFB_HAEIN PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|1075134|pir||I64115
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain -
Haemophilus influenzae >gi|1574770|gb|AAC22958.1|
(U32810) phenylalanyl-tRNA synthetase, beta subunit
(pheT) [Haemophilus influenzae Rd]
Length = 795
Score = 81.1 bits (197), Expect = 3e-14
Identities = 119/555 (21%), Positives = 214/555 (38%), Gaps = 96/555 (17%)
Query: 55 NRPDLWSAEGVARQIRWALGLQSGLPEYEVKESDVV--VYVDEKLKNVRPYGVYAIVEGL 112
NR D S G+AR+I +E + + V +D + P + +++ +
Sbjct: 165 NRADCLSIAGIAREIGVVNKQLVNQLHFEAAPATISDKVQIDLQAPEACPRYLLRVIKNV 224
Query: 113 NLDEDS---------------LSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYR 157
N+ S + ++ + + L FG+ + FD KV P+ R
Sbjct: 225 NVKAPSPMWMQEKLRRCGIRSIDPIVDITNYILLEFGQ-----PMHAFDAAKVTQPVQVR 279
Query: 158 AAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIIN 217
A++ E+ V L G K + + L+ D G L+M I
Sbjct: 280 FAKEGEELVLLD--------------------GSTAKLQSNTLLIADQNGP-LAMAGIFG 318
Query: 218 SELTGRVTTETKKVFIDVT--------------------------GWDLKKVMLALNVMV 251
+G V +ETK V ++ G D + A+
Sbjct: 319 GAASG-VNSETKDVILESAFFAPLAIAGRARQYGLHTDASHRFERGVDFELARKAMERAT 377
Query: 252 TALAER-GGKIRSVKVIYKDFEIVTPDLTPKRFEVEL--NYIRKLSGLDLKDEEIKELLE 308
L E GG+ + E + PK V+L + + L G ++ + E+
Sbjct: 378 ALLLEICGGEAGEI------CEASSETHLPKVNTVQLRRSKLDALLGHHIETGSVTEIFH 431
Query: 309 RMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFK 368
R+ + V + + ++R DI D++E+V YGYN+I P + R
Sbjct: 432 RLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNSIPNNAPLAHLCMREHKES 491
Query: 369 DFEDA-IRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLL 427
D + A I+ +V QE +T++ + ++Q + P +E + + NP+S SA+R L+
Sbjct: 492 DLDLARIKTALVDADYQEAITYSFVDPKIQ--SLLHPHQEALVLPNPISVEMSAMRVSLI 549
Query: 428 PSLM-EFLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPKLAVALAGSEYT--FTNAK 484
L+ L N ++ R+FE GL + D + E E L+ + G+ + +
Sbjct: 550 SGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEFVLSAVITGTAKSEHWAGKA 609
Query: 485 EILDSLMRHLGVEYEIEETEHGSFIS-----------GRVGKVLVNGKEVGIIGEIHPQV 533
E +D +E + TE G + G+ + ++G+E+G IG IHP +
Sbjct: 610 ESVDFFDLKGDLESVLSLTEGGHRVRFVAKQFDALHPGQSAAIELDGQEIGFIGAIHPSI 669
Query: 534 LENWNIEVPVVAFEI 548
+ + FEI
Sbjct: 670 SQKLGLNGKTFVFEI 684
>sp|P74296|SYFB_SYNY3 PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|7437787|pir||S75931 hypothetical
protein - Synechocystis sp. (strain PCC 6803)
>gi|1653476|dbj|BAA18390.1| (D90913) phenylalanyl-tRNA
synthetase [Synechocystis sp.]
Length = 810
Score = 79.6 bits (193), Expect = 8e-14
Identities = 128/565 (22%), Positives = 230/565 (40%), Gaps = 87/565 (15%)
Query: 51 SKDTNRPDLWSAEGVARQIRWALGLQSGLPEYE---VKESDVVVYVDEKLKNVRPYGVYA 107
S NR D S GVAR++ G + LPE + V + D+ + V E P V
Sbjct: 163 SPTANRADALSMVGVAREVAALTGGKLSLPEIKAVSVSDQDLPISVTEP--QACPTYVGT 220
Query: 108 IVEGLNL--DEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVK--PPIYYRAAEKTE 163
++ G+ + D L Q + L G R + + ++ ++ P++ +K +
Sbjct: 221 VIRGVKVGPSPDWLQQRL-------LAAGTRPINNVVDVTNYVLLEWGQPLHSFDQDKLQ 273
Query: 164 KFV-PLGFEEELTLEEILEKHEKGIEYGHLIKDKPHYPLLVDSEGNVLSMPPIINSELTG 222
V P GF + E+ EK I + LLV + +++ ++ T
Sbjct: 274 TLVGPEGFALGV---RFAEEGEKLITLDDQERTLQPQNLLVTANDQPVAIAGVMGGAAT- 329
Query: 223 RVTTETKKVFIDVTGWD---LKKVMLALNVMVTALA--ERGGKIRSVKV-IYKDFEIVTP 276
V T+ + ++ +D ++K A+N+ + ERG ++V +++ ++T
Sbjct: 330 EVDENTQNIVLETALFDGVTIRKSSKAINLRSESSTRYERGVNRCELEVALHRAIALMTE 389
Query: 277 -----------------------DLTPKRFEVELNYIRKLSGL-DLKDEEIKELLERMMY 312
+L +R + L + +G+ ++ E+++ +L +
Sbjct: 390 LAGGTVVRQGKADQRQDRGEAIINLRLERLQQLLGKVNTPTGIGNITAEDVERILTDLGC 449
Query: 313 SVELEDGKAKLLY----PAFRD-DIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPF 367
+ + ++ P++R DI D++E+V YGY++ + P + G P
Sbjct: 450 GLTRQSDSDTPVWAVTVPSYRQRDIEREIDLIEEVARLYGYDHFCEQLPSNTIAGGLSPS 509
Query: 368 KDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLL 427
E A+R+ G GL E++ ++L P V +ANP+ +SALR LL
Sbjct: 510 YQAELALREACRGVGLTEVVHYSLVK----------PHGSEVMLANPLFAEYSALRTNLL 559
Query: 428 PSLME-FLSNNTHEEYPQRIFEVGLATLIDESRETKTISEPK-LAVALAGSEYT------ 479
L+ F +N FEVG +E I E LA GS+ T
Sbjct: 560 DGLITAFANNQAQNNGALNAFEVGRVFWQNEG----DIGEADHLAGICGGSQITEGTWPQ 615
Query: 480 --------FTNAKEILDSLMRHLGVEYEIE-ETEHGSFISGRVGKVLVNGKEVGIIGEIH 530
+ +AK +L+++ + LG + + GR + NG +G G++H
Sbjct: 616 GGKPQPMSWYDAKGLLEAIFQRLGATVTYSGDHQDPRLHPGRTALLSCNGTVLGRFGQLH 675
Query: 531 PQVLENWNIEVPVVAFEIFLRPLYQ 555
PQ+ + V AFEI L PLYQ
Sbjct: 676 PQLRREKGLIDEVYAFEITLTPLYQ 700
>sp|Q9ZDB4|SYFB_RICPR PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|7437792|pir||A71700
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain
(pheT) RP418 - Rickettsia prowazekii
>gi|3860975|emb|CAA14875.1| (AJ235271) PHENYLALANYL-TRNA
SYNTHETASE BETA CHAIN (pheT) [Rickettsia prowazekii]
Length = 815
Score = 78.8 bits (191), Expect = 1e-13
Identities = 81/366 (22%), Positives = 169/366 (46%), Gaps = 33/366 (9%)
Query: 204 DSEGNVLSMPPIINSELTG----RVTTETKKVFIDVTGWDLKKVMLALNVMVTALAERGG 259
DS NV+ N+++ R+ +T + + D ALN+ + G
Sbjct: 347 DSTTNVILEAACFNAKMVAASGRRLKIDTDARYRNERNIDRNFTEKALNIATNLILSICG 406
Query: 260 KIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDG 319
+V+ ++ + K + + ++ K++G+ L +EI+++L ++ + +++
Sbjct: 407 NCEVSEVV----KVGEQEPQKKPLDFSVYFLEKITGIKLSIQEIEDILNKLGFITDVKGD 462
Query: 320 KAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEE-PKLAVQGRGDPFKDFEDAIRDLM 378
K++ P++R DI D+ E+++ YGY+ IE + P+L +K + + ++
Sbjct: 463 IIKVIAPSWRHDINILEDIAEEIVRIYGYDKIESIKLPELYQNNNLREYKRIS-SFKRIL 521
Query: 379 VGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNT 438
G E++T + + E K+ +E + + NP+S + +R +LP+L+ +S N
Sbjct: 522 ASKGYDEVVTNSFMSSEDA--KLFAELKEGLFLLNPMSIEENYMRPTVLPNLISIVSKNL 579
Query: 439 HEEYPQR-IFEVGLATL---IDESRETKTISEP--KLAVALAGSEYTFTNAKEILDSLMR 492
+ FEVG + + I+ + T IS G Y + K L+ ++
Sbjct: 580 ARDVKDMAFFEVGPSFVNLNIESTYLTAIISGAFNNKNPHSFGRNYDIFDIKGDLEQVIE 639
Query: 493 HLGVEYE----IEETEHGSF------ISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVP 542
+ G+ + I+ET + I+ R+GK L+ G G+IHP++L+ ++I
Sbjct: 640 YAGLSLDKCIVIDETVLPQYYHPTRAINIRLGKNLL-----GHFGQIHPKILKYYDINQE 694
Query: 543 VVAFEI 548
+ AFE+
Sbjct: 695 IFAFEL 700
>pir||B82888 phenylalanine-tRNA synthetase beta chain UU457 [imported] -
Ureaplasma urealyticum
>gi|6899450|gb|AAF30869.1|AE002142_3 (AE002142)
phenylalanine-tRNA synthetase beta chain [Ureaplasma
urealyticum]
Length = 772
Score = 78.4 bits (190), Expect = 2e-13
Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 17/265 (6%)
Query: 286 ELNYIRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIA 345
++N + G ++ + + L+R+ Y + K+ L+ P+ R D+++ DV ED++
Sbjct: 405 KINQVSDFVGAEIDLDTAQTFLKRLGYKIN----KSNLITPSHRYDVLNEFDVYEDIMKK 460
Query: 346 YGYNNIEPEEPKLAVQG-RGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIP 404
I+P+ + + DFE + D +V GL E T+NL N+ +
Sbjct: 461 ISIQEIKPQPISFDILNFENNLAYDFEKKVSDFLVDQGLFECKTYNLKNQTQAHEFNFFN 520
Query: 405 EEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYP-QRIFEVGLATLIDESRET-- 461
++ EI NP S S L+ L SL+E L N +++ + IFE+ +D S++T
Sbjct: 521 FKQAYEINNPTSNMRSHLKLNNLNSLLEVLEYNQNQKNELENIFEISKINPVDSSQQTVL 580
Query: 462 -----KTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVEYEIEETE--HGSFISGRVG 514
K + K+ +L + F K +L +L+ L ++Y ++ + + + ++
Sbjct: 581 SIILCKPLINSKINDSLIVN--NFVTTKALLHALLTKLNIDYAYDKNHVVNELYDNNQLA 638
Query: 515 KVLVNGKEVGIIGEIHPQVLENWNI 539
+ N + G IG++ QV + + +
Sbjct: 639 LINANKQVFGFIGQLKNQVKKTYGL 663
>dbj|BAA86499.1| (AB033011) KIAA1185 protein [Homo sapiens]
Length = 403
Score = 75.3 bits (182), Expect = 2e-12
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 18/165 (10%)
Query: 89 VVVYVDEKLKNVRPYGVYAIVEGLNLDE-DSLSQMIQLQEKVALTFGRRRREVAIGIFDF 147
+ V V ++++VRPY V A+V G++L ++L + + Q K+ +R + +
Sbjct: 141 LTVRVSPEVRDVRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHEL 200
Query: 148 EKVKPPIYYRAAEKTE-KFVPLGFEE--------ELTLEEILEKHEKGIE-------YGH 191
VK P+ Y A + K VPLG +E +L LE ++ +K + Y H
Sbjct: 201 RAVKGPLLYCARPPQDLKIVPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLH 260
Query: 192 LIKDKPHYPLLVDSEGNVLSMPPIINSELTGRVTTETKKVFIDVT 236
L+ +YP LVD++G+V+S PPI NSE T +V T +F++VT
Sbjct: 261 LLDGNENYPCLVDADGDVISFPPITNSEKT-KVKKTTSDLFLEVT 304
>gi|11465812 phenylalanine tRNA synthetase [Porphyra purpurea]
>gi|1711629|sp|P51346|SYFB_PORPU PHENYLALANYL-TRNA
SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE BETA
CHAIN) (PHERS) >gi|2147898|pir||S73267
phenylalanine--tRNA ligase (EC 6.1.1.20) - red alga
(Porphyra purpurea) chloroplast
>gi|1276812|gb|AAC08232.1| (U38804) phenylalanine tRNA
synthetase [Porphyra purpurea]
Length = 720
Score = 73.4 bits (177), Expect = 6e-12
Identities = 121/590 (20%), Positives = 238/590 (39%), Gaps = 111/590 (18%)
Query: 34 ELDDVWEEN--GKVYFKLDSKDT-NRPDLWSAEGVARQI----RWALGLQSGLPEYEVKE 86
E++DV N G + LD T NR D+ S G++R++ + + + +P + +
Sbjct: 54 EVEDVEMVNIDGHKDYILDVTSTANRSDVLSMIGLSREVSALTQADIVKTADIPSAGLFD 113
Query: 87 SDVVVYVDEKLKNVRPYGVYAIVEGLNLDED--------------SLSQMIQLQEKVALT 132
+ + D+ L N Y V AI++ + + + S + +I + + L
Sbjct: 114 NISTIISDDSLLNCSYY-VSAIMDNIVIQDSPKWLKNRLYSCGFISQNLIIDISNYIMLK 172
Query: 133 FGRRRREVAIGIFDFEKVKPPIYYRAAEKTEKFVPLGFEEELTLEEILEKHEKGIEYGHL 192
+G+ I I D +K+ A TE ++ + + ++ ++ K I
Sbjct: 173 WGQ-----PINIIDLKKI-------ADTNTESYIEITSNFCSSKQKSVKLDNKDIALSRD 220
Query: 193 IKDKPHYPLLVDSEGNVLSMPPI-INSELTGRVTTETKKVFIDVTGWDLKKVM-----LA 246
+ L+ N+ S+ I IN E V TK +FI+ + V +
Sbjct: 221 V-------LITQINNNITSIAGIGINQEF--HVDQNTKLIFIEAAIFKEAVVRKSSRSIG 271
Query: 247 LNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKR----------------FEVELNYI 290
+ + ERG I + + Y++ + +LT + ++ L I
Sbjct: 272 IRTESSIRQERGLNIDNGRSAYRETLSLLIELTHGKVKATFLKKETENSTLNIDISLKKI 331
Query: 291 RKLSGLDLKD---------EEIKELLERMMYSVELEDGKA-KLLYPAFRD-DIMHARDVL 339
+ + G +KD +EI+ L+ + + + +D K ++ P++R D+ D++
Sbjct: 332 QDVLG-PIKDNHTVRFLSFDEIENTLKSLQFKITKKDVKKFNVIIPSYRKYDVFREIDIV 390
Query: 340 EDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFK 399
E++ YGYN + + PK+ ++F D IR+++ GL E++ ++L + +
Sbjct: 391 EEIARVYGYNQFQSKIPKIQFTKHPSSRRNFIDQIRNILRNLGLTELVHYSLVKSKGE-- 448
Query: 400 KMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQRI--FEVGLATLIDE 457
+ + NP+ + +S LR LL L+ + N ++ Q + FE+G +
Sbjct: 449 ---------INLKNPLIKDYSTLRSSLLEGLINASAYNI-KQSNQTVDGFEIG---TVFN 495
Query: 458 SRETKTISEPKLAVALAGS------------EYTFTNAKEILDSLMRHLGVEYEIEETEH 505
+ K I KLA+ L GS + AK I+++ R L + + E
Sbjct: 496 LKRNKIIETTKLAIILGGSLDIRSEWSEPAHSLNWYEAKGIIENFFRKLNKSIQWVKRES 555
Query: 506 G----SFISGRVGKVLV-NGKEVGIIGEIHPQVLENWNIEVPVVAFEIFL 550
+FI L N +G+ GE++ + + EI L
Sbjct: 556 SNDQINFIQNNKSATLTYNNDNIGLFGELNELTSSQFGFNTELFVLEIDL 605
>sp|P47437|SYFB_MYCGE PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE
BETA CHAIN) (PHERS) >gi|1361745|pir||E64221
phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain -
Mycoplasma genitalium >gi|3844792|gb|AAC71413.1|
(U39699) phenylalanyl-tRNA synthetase, subunit beta
(pheT) [Mycoplasma genitalium]
Length = 806
Score = 72.6 bits (175), Expect = 1e-11
Identities = 71/295 (24%), Positives = 138/295 (46%), Gaps = 40/295 (13%)
Query: 281 KRFEVELNYIRKLSGLDLK---DEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARD 337
K+ V + IR+L G++ K D+ IK+ L ++ + V+ + L P++R DI +D
Sbjct: 416 KKLTVNFHKIRQLIGIEKKELTDQTIKKSLSQLGFKVDNQ----LLKIPSYRQDINTWQD 471
Query: 338 VLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDL---MVGFGLQEIMTFNLTNK 394
+ E+++ N ++P + + + +A+ L + G ++T+ LT++
Sbjct: 472 ISEEIVKLIDINKLKPIGITSSFNFEKSSYFNTFNALTKLRKKLQTLGFHNVITYQLTDQ 531
Query: 395 EVQ--FKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFL-SNNTHEEYPQRIFEVGL 451
+ F N+ E + I NPVSQ S +R L+ SL++ L +NN ++ IFE
Sbjct: 532 KSAKTFNLFNL--ENFITIKNPVSQNHSVMRVSLIDSLLKVLKTNNNYKNELVNIFEFSF 589
Query: 452 ATLIDESRETKTISEPKLAVALAGSEYTFTNA--------------KEILDSLMRHLGVE 497
KT + +L +A+ E FT++ K + ++ +LG
Sbjct: 590 ---------IKTQNNSELHLAVLWVEKLFTSSFNPMQGISNDVFTMKGLAKLIVANLGFS 640
Query: 498 YEIEETEHGS-FISGRVGKVLVNGKEVGIIGEIHPQVLENWNI-EVPVVAFEIFL 550
+ E + F++ + K++V +++G IG I +L N+++ P+ EI L
Sbjct: 641 CDFEPLDDSDYFVNNQSLKIVVFNEQIGFIGLIKESLLNNYDLNNKPIYCLEINL 695
>pir||C82767 phenylalanyl-tRNA sinthetase beta chain XF0742 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9105632|gb|AAF83552.1|AE003916_6 (AE003916)
phenylalanyl-tRNA sinthetase beta chain [Xylella
fastidiosa]
Length = 792
Score = 72.6 bits (175), Expect = 1e-11
Identities = 63/278 (22%), Positives = 123/278 (43%), Gaps = 17/278 (6%)
Query: 290 IRKLSGLDLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYN 349
I +L G+ + D E++ +L + V + +++ P+ R DI D++E+++ GY
Sbjct: 412 IARLLGIVIDDVEVERILHALGMQVTTQAEGWRVVAPSRRFDIAIEEDLIEELVRIRGYE 471
Query: 350 NIEPEEPKLAVQGRGDPFKDFED--AIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEE 407
++ P + P + D ++R ++ LQE + + + E+ ++ + +
Sbjct: 472 HLPTALP-IGASHIAMPSETRLDMTSVRRQLIARELQETINYAFIDAEL-LRRWQLNTGQ 529
Query: 408 IVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLATLIDESRETKTISE 466
++ + NP+S + +R LLP L+ L N + + R+FE+G + +
Sbjct: 530 VM-LMNPLSAELAVIRPRLLPGLVAALGRNIARQLERVRLFELGNVFTASDEAGAAPLET 588
Query: 467 PKLAVALAGSEYT-----------FTNAKEILDSLMRHLGVEYEIEETEHGSFISGRVGK 515
+A A+ G + F + K L+SL G + GR
Sbjct: 589 QHVAAAVCGDAFALQWGEQARKVDFYDLKGDLESLAAASGAVLTFHSSAQPWGHPGRSAD 648
Query: 516 VLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEIFLRPL 553
V + +G IG++HP + + I V V+AFE+ L PL
Sbjct: 649 VWCDDTCIGWIGQLHPALTQTLEINVDVIAFELALEPL 686
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.138 0.395
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213621210
Number of Sequences: 2977
Number of extensions: 9499019
Number of successful extensions: 25944
Number of sequences better than 1.0e-10: 48
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 25746
Number of HSP's gapped (non-prelim): 58
length of query: 556
length of database: 189,106,746
effective HSP length: 58
effective length of query: 498
effective length of database: 154,394,500
effective search space: 76888461000
effective search space used: 76888461000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 167 (69.5 bits)