BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2429 1069686 1068580 -369 PHOSPHONOACETATE HYDROLASE related
         (369 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||A75091 phosphonoacetate hydrolase related PAB2429 - Pyrococ...   768  0.0
pir||C71052 hypothetical protein PH1114 - Pyrococcus horikoshii ...   679  0.0

>pir||A75091 phosphonoacetate hydrolase related PAB2429 - Pyrococcus abyssi
           (strain Orsay) >gi|5458542|emb|CAB50030.1| (AJ248286)
           PHOSPHONOACETATE HYDROLASE related [Pyrococcus abyssi]
           Length = 369
           
 Score =  768 bits (1962), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MKLALISLDGNGVYNLKHMPFLSELAEEGSMFIVDSIFPTLTDLVHTSVMTGVEPRIHWV 60
           MKLALISLDGNGVYNLKHMPFLSELAEEGSMFIVDSIFPTLTDLVHTSVMTGVEPRIHWV
Sbjct: 1   MKLALISLDGNGVYNLKHMPFLSELAEEGSMFIVDSIFPTLTDLVHTSVMTGVEPRIHWV 60

Query: 61  VENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPLVQDLLRQRGIRVASVSGYTMPPFSNTD 120
           VENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPLVQDLLRQRGIRVASVSGYTMPPFSNTD
Sbjct: 61  VENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPLVQDLLRQRGIRVASVSGYTMPPFSNTD 120

Query: 121 VRIFPPFFSSDELYRTHGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPE 180
           VRIFPPFFSSDELYRTHGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPE
Sbjct: 121 VRIFPPFFSSDELYRTHGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPE 180

Query: 181 SSEALKAVETVDSAVRTLWERLKNEYAFIIFADHGQESVHTWVNLREYLERNGIEVLRIS 240
           SSEALKAVETVDSAVRTLWERLKNEYAFIIFADHGQESVHTWVNLREYLERNGIEVLRIS
Sbjct: 181 SSEALKAVETVDSAVRTLWERLKNEYAFIIFADHGQESVHTWVNLREYLERNGIEVLRIS 240

Query: 241 SGGGVHVYLKNPGEKEEAYEILRRAPGVKSVFFREDLPYLDAPVSGDLIVSAKEGYWFCH 300
           SGGGVHVYLKNPGEKEEAYEILRRAPGVKSVFFREDLPYLDAPVSGDLIVSAKEGYWFCH
Sbjct: 241 SGGGVHVYLKNPGEKEEAYEILRRAPGVKSVFFREDLPYLDAPVSGDLIVSAKEGYWFCH 300

Query: 301 HRMCRGIKGRSYWVKGMHGSMNERVMKVPLIIWGLNVRREGASLYDIAPTILKFFGLEKR 360
           HRMCRGIKGRSYWVKGMHGSMNERVMKVPLIIWGLNVRREGASLYDIAPTILKFFGLEKR
Sbjct: 301 HRMCRGIKGRSYWVKGMHGSMNERVMKVPLIIWGLNVRREGASLYDIAPTILKFFGLEKR 360

Query: 361 GDMKGEPLI 369
           GDMKGEPLI
Sbjct: 361 GDMKGEPLI 369


>pir||C71052 hypothetical protein PH1114 - Pyrococcus horikoshii
           >gi|3257530|dbj|BAA30213.1| (AP000005) 370aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 370
           
 Score =  679 bits (1733), Expect = 0.0
 Identities = 314/368 (85%), Positives = 346/368 (93%)

Query: 2   KLALISLDGNGVYNLKHMPFLSELAEEGSMFIVDSIFPTLTDLVHTSVMTGVEPRIHWVV 61
           KLALISLDGNG+YNLK+MPFLSELAE+G +F VDSIFPTLTDLVHT+VMTGVEPR HWVV
Sbjct: 3   KLALISLDGNGIYNLKYMPFLSELAEKGDIFTVDSIFPTLTDLVHTTVMTGVEPRHHWVV 62

Query: 62  ENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPLVQDLLRQRGIRVASVSGYTMPPFSNTDV 121
           ENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPL+QD+LRQRG+R+ASVSGYTMPPFSN DV
Sbjct: 63  ENGYYDRLSGVRVKFYEYDVAFNPHKVIKAPLIQDILRQRGVRIASVSGYTMPPFSNVDV 122

Query: 122 RIFPPFFSSDELYRTHGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPES 181
           RIFPPFFSSDELYR HGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPES
Sbjct: 123 RIFPPFFSSDELYRRHGRDWKKDVWVLNSALYLYEECKPDLLLVHFASIDGMQHDHGPES 182

Query: 182 SEALKAVETVDSAVRTLWERLKNEYAFIIFADHGQESVHTWVNLREYLERNGIEVLRISS 241
            EALKAVETVDSA+R LWERLK+EYAFIIFADHGQE VHTWVNLREYL   GIE LR+SS
Sbjct: 183 REALKAVETVDSAIRALWERLKDEYAFIIFADHGQEEVHTWVNLREYLRNKGIETLRVSS 242

Query: 242 GGGVHVYLKNPGEKEEAYEILRRAPGVKSVFFREDLPYLDAPVSGDLIVSAKEGYWFCHH 301
           GGGVHVYLK+P E+E+AYE+LRRAPGVK+VF REDLPYL+APVSGDLIVSAKEG+WFCHH
Sbjct: 243 GGGVHVYLKDPREREDAYEVLRRAPGVKAVFLREDLPYLNAPVSGDLIVSAKEGFWFCHH 302

Query: 302 RMCRGIKGRSYWVKGMHGSMNERVMKVPLIIWGLNVRREGASLYDIAPTILKFFGLEKRG 361
           R C+GIKG+SYWV+GMHGS+NERV+KVPL++W L  ++E A+LYDIAPTILKFFG+EKR 
Sbjct: 303 RECKGIKGKSYWVRGMHGSLNERVVKVPLVLWNLEAKKEEATLYDIAPTILKFFGVEKRV 362

Query: 362 DMKGEPLI 369
           +M G+ LI
Sbjct: 363 EMIGKSLI 370


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.322    0.141    0.434 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147026519
Number of Sequences: 2977
Number of extensions: 6219714
Number of successful extensions: 11977
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11975
Number of HSP's gapped (non-prelim): 2
length of query: 369
length of database: 189,106,746
effective HSP length: 52
effective length of query: 317
effective length of database: 157,985,422
effective search space: 50081378774
effective search space used: 50081378774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 166 (69.1 bits)