BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2432 (thiM) DE:hydroxyethylthiazole kinase (thiM)
(268 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UZQ4|THIM_PYRAB HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 525 e-148
sp|O58877|THIM_PYRHO HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 432 e-120
sp|P39593|THIM_BACSU HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 207 9e-53
pdb|1ESJ|A Chain A, Crystal Structure Of Thiazole Kinase Mutant ... 203 1e-51
pdb|1EKK|A Chain A, Crystal Structure Of Hydroxyethylthiazole Ki... 203 2e-51
dbj|BAB07068.1| (AP001518) hydroxyethylthiazole kinase [Bacillus... 192 3e-48
gi|11499657 hydroxyethylthiazole kinase (thiM) [Archaeoglobus fu... 189 2e-47
sp|Q57233|THIM_HAEIN HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 183 1e-45
dbj|BAB03021.1| (AP001297) hydoxyethylthiazole kinase-like prote... 180 1e-44
sp|Q9RGS6|THIM_STACA HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 170 2e-41
sp|Q9ZKZ9|THIM_HELPJ HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 156 3e-37
sp|P40386|THI4_SCHPO PROBABLE THIAMINE BIOSYNTHETIC BIFUNCTIONAL... 155 4e-37
pir||E64625 hydroxyethylthiazole kinase (EC 2.7.1.50) - Helicoba... 154 1e-36
sp|O25516|THIM_HELPY HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 154 1e-36
sp|P76423|THIM_ECOLI HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 146 2e-34
sp|P55883|THIM_SALTY HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BET... 145 5e-34
dbj|BAA76743.1| (D88442) hydoxyethylthiazole kinase [Escherichia... 134 8e-31
dbj|BAA89257.1| (AB024693) OrfG [Leptospira interrogans serovar ... 127 1e-28
gi|6325042 TMP pyrophosphorylase, hydroxyethylthiazole kinase; T... 99 5e-20
>sp|Q9UZQ4|THIM_PYRAB HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|7434092|pir||E75087
hydroxyethylthiazole kinase (thim) PAB2432 - Pyrococcus
abyssi (strain Orsay) >gi|5458514|emb|CAB50002.1|
(AJ248286) hydroxyethylthiazole kinase (thiM)
[Pyrococcus abyssi]
Length = 268
Score = 525 bits (1338), Expect = e-148
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MNALNFIVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLA 60
MNALNFIVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLA
Sbjct: 1 MNALNFIVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLA 60
Query: 61 DAVVINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVL 120
DAVVINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVL
Sbjct: 61 DAVVINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVL 120
Query: 121 KGNFGEISSLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKV 180
KGNFGEISSLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKV
Sbjct: 121 KGNFGEISSLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKV 180
Query: 181 FAIYNGHKLLERVTGTGCIVTAITGAFVAVTEPLRAAISSLVVFGIAAEKAYEEAKYPGS 240
FAIYNGHKLLERVTGTGCIVTAITGAFVAVTEPLRAAISSLVVFGIAAEKAYEEAKYPGS
Sbjct: 181 FAIYNGHKLLERVTGTGCIVTAITGAFVAVTEPLRAAISSLVVFGIAAEKAYEEAKYPGS 240
Query: 241 FHVKLYDWLYRIDGEVIRKYAKVREVGV 268
FHVKLYDWLYRIDGEVIRKYAKVREVGV
Sbjct: 241 FHVKLYDWLYRIDGEVIRKYAKVREVGV 268
>sp|O58877|THIM_PYRHO HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|7434093|pir||G71057
hypothetical protein PH1157 - Pyrococcus horikoshii
>gi|3257574|dbj|BAA30257.1| (AP000005) 265aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 265
Score = 432 bits (1098), Expect = e-120
Identities = 216/263 (82%), Positives = 238/263 (90%)
Query: 4 LNFIVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAV 63
+ FI+EAL VR+R+PLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMI LADAV
Sbjct: 1 MKFIIEALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIRLADAV 60
Query: 64 VINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGN 123
VINIGTLDS WR+SM+KA EIANE+ KPIVLDPVGAGATK RT+V+LEIL RGV VLKGN
Sbjct: 61 VINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGN 120
Query: 124 FGEISSLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAI 183
FGEIS+LLGE GKTRGVDS EY EE+AK L ++AA+EFNTTVAVTGAVDYVSDG + FA+
Sbjct: 121 FGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAV 180
Query: 184 YNGHKLLERVTGTGCIVTAITGAFVAVTEPLRAAISSLVVFGIAAEKAYEEAKYPGSFHV 243
YNGH+LL RVTGTGC+V A+TGAFVAVTEPL+A S+LV FGIAAEKAYEEAKYPGSFHV
Sbjct: 181 YNGHELLGRVTGTGCMVAALTGAFVAVTEPLKATTSALVTFGIAAEKAYEEAKYPGSFHV 240
Query: 244 KLYDWLYRIDGEVIRKYAKVREV 266
KLYDWLYRI+ VIR YAKVREV
Sbjct: 241 KLYDWLYRINENVIRTYAKVREV 263
>sp|P39593|THIM_BACSU HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|629032|pir||S39680
hydroxyethylthiazole kinase (EC 2.7.1.50) thiK -
Bacillus subtilis >gi|5821947|pdb|1C3Q|A Chain A,
Crystal Structure Of Native Thiazole Kinase In The
Monoclinic Form >gi|5821949|pdb|1C3Q|B Chain B, Crystal
Structure Of Native Thiazole Kinase In The Monoclinic
Form >gi|5821951|pdb|1C3Q|C Chain C, Crystal Structure
Of Native Thiazole Kinase In The Monoclinic Form
>gi|413949|emb|CAA51581.1| (X73124) ipa-25d [Bacillus
subtilis] >gi|2636365|emb|CAB15856.1| (Z99123)
hydroxyethylthiazole kinase [Bacillus subtilis]
Length = 272
Score = 207 bits (522), Expect = 9e-53
Identities = 118/265 (44%), Positives = 178/265 (66%), Gaps = 6/265 (2%)
Query: 9 EALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIG 68
+ L VR+ PLVH+ITN VV N TAN LLALGASPVMA+A+EE+ +M +A A+V+NIG
Sbjct: 8 KCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIG 67
Query: 69 TLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEI 127
TL ++MI A + ANE P++LDPVGAGAT RT+ A +I+ + + ++GN EI
Sbjct: 68 TLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEI 127
Query: 128 SSLLGEFG-KTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNG 186
+ +G +GVD+ E + + LA AA++ NT +A+TG VD ++D V+ ++NG
Sbjct: 128 AHTVGVTDWLIKGVDAGEGGGDIIR-LAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNG 186
Query: 187 HKLLERVTGTGCIVTAITGAFVAVTE-PLRAAISSLVVFGIAAEKAYEEA--KYPGSFHV 243
HKLL +VTG GC++T++ GAF AV E PL AAI+++ +G+AA+ A ++ K PGSF +
Sbjct: 187 HKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQI 246
Query: 244 KLYDWLYRIDGEVIRKYAKVREVGV 268
+L + L + + ++++A + V V
Sbjct: 247 ELLNKLSTVTEQDVQEWATIERVTV 271
>pdb|1ESJ|A Chain A, Crystal Structure Of Thiazole Kinase Mutant (C198s)
>gi|10121010|pdb|1ESJ|B Chain B, Crystal Structure Of
Thiazole Kinase Mutant (C198s) >gi|10121011|pdb|1ESJ|C
Chain C, Crystal Structure Of Thiazole Kinase Mutant
(C198s) >gi|10121012|pdb|1ESQ|A Chain A, Crystal
Structure Of Thiazole Kinase Mutant (C198s) With Atp And
Thiazole Phosphate. >gi|10121013|pdb|1ESQ|B Chain B,
Crystal Structure Of Thiazole Kinase Mutant (C198s) With
Atp And Thiazole Phosphate. >gi|10121014|pdb|1ESQ|C
Chain C, Crystal Structure Of Thiazole Kinase Mutant
(C198s) With Atp And Thiazole Phosphate
Length = 284
Score = 203 bits (512), Expect = 1e-51
Identities = 117/265 (44%), Positives = 177/265 (66%), Gaps = 6/265 (2%)
Query: 9 EALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIG 68
+ L VR+ PLVH+ITN VV N TAN LLALGASPVMA+A+EE+ +M +A A+V+NIG
Sbjct: 20 KCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIG 79
Query: 69 TLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEI 127
TL ++MI A + ANE P++LDPVGAGAT RT+ A +I+ + + ++GN EI
Sbjct: 80 TLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEI 139
Query: 128 SSLLGEFG-KTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNG 186
+ +G +GVD+ E + + LA AA++ NT +A+TG VD ++D V+ ++NG
Sbjct: 140 AHTVGVTDWLIKGVDAGEGGGDIIR-LAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNG 198
Query: 187 HKLLERVTGTGCIVTAITGAFVAVTE-PLRAAISSLVVFGIAAEKAYEEA--KYPGSFHV 243
HKLL +VTG G ++T++ GAF AV E PL AAI+++ +G+AA+ A ++ K PGSF +
Sbjct: 199 HKLLTKVTGAGSLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQI 258
Query: 244 KLYDWLYRIDGEVIRKYAKVREVGV 268
+L + L + + ++++A + V V
Sbjct: 259 ELLNKLSTVTEQDVQEWATIERVTV 283
>pdb|1EKK|A Chain A, Crystal Structure Of Hydroxyethylthiazole Kinase In The R3
Form With Hydroxyethylthiazole >gi|10120993|pdb|1EKK|B
Chain B, Crystal Structure Of Hydroxyethylthiazole
Kinase In The R3 Form With Hydroxyethylthiazole
>gi|10120994|pdb|1EKQ|A Chain A, Crystal Structure Of
Hydroxyethylthiazole Kinase In R3 Space Group
>gi|10120995|pdb|1EKQ|B Chain B, Crystal Structure Of
Hydroxyethylthiazole Kinase In R3 Space Group
Length = 272
Score = 203 bits (511), Expect = 2e-51
Identities = 117/265 (44%), Positives = 177/265 (66%), Gaps = 6/265 (2%)
Query: 9 EALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIG 68
+ L VR+ PLVH+ITN VV N TAN LLALGASPVMA+A+EE+ +M +A A+V+NIG
Sbjct: 8 KCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIG 67
Query: 69 TLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEI 127
TL ++MI A + ANE P++LDPVGAGAT RT+ A +I+ + + ++GN EI
Sbjct: 68 TLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEI 127
Query: 128 SSLLGEFG-KTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNG 186
+ +G +GVD+ E + + LA AA++ NT +A+TG VD ++D V+ ++NG
Sbjct: 128 AHTVGVTDWLIKGVDAGEGGGDIIR-LAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNG 186
Query: 187 HKLLERVTGTGCIVTAITGAFVAVTE-PLRAAISSLVVFGIAAEKAYEEA--KYPGSFHV 243
HKLL +VTG G ++T++ GAF AV E PL AAI+++ +G+AA+ A ++ K PGSF +
Sbjct: 187 HKLLTKVTGAGXLLTSVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQI 246
Query: 244 KLYDWLYRIDGEVIRKYAKVREVGV 268
+L + L + + ++++A + V V
Sbjct: 247 ELLNKLSTVTEQDVQEWATIERVTV 271
>dbj|BAB07068.1| (AP001518) hydroxyethylthiazole kinase [Bacillus halodurans]
Length = 261
Score = 192 bits (484), Expect = 3e-48
Identities = 117/258 (45%), Positives = 164/258 (63%), Gaps = 7/258 (2%)
Query: 10 ALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGT 69
++ +RK PL+H +TN VV N TAN LLA+GASPVMA+A+EE+ +M +A+A+++NIGT
Sbjct: 2 SIEMLRKSNPLIHCMTNVVVTNFTANGLLAVGASPVMAYAKEEVADMAKVANALLLNIGT 61
Query: 70 LDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEIS 128
L + +MI A + AN+ P+VLDPVGAGAT RT+ IL + VT+++GN GEI+
Sbjct: 62 LSAESIDNMIIAGKAANKAGAPVVLDPVGAGATVFRTESCKRILKEVDVTIVRGNGGEIA 121
Query: 129 SLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHK 188
+L + G +GVD S D + + LA AA N+ V VTG VD V+DG YNGH
Sbjct: 122 ALSDQAGTVKGVDGS-IDSDPVE-LAKHAANVLNSAVVVTGEVDVVTDGTGTVCGYNGHP 179
Query: 189 LLERVTGTGCIVTAITGAFVAV-TEPLRAAIS-SLVVFGIAAEKAYEE--AKYPGSFHVK 244
L +V GTGC+ AI AF ++ T+ I LV +G+AAEKAYEE AK GSF
Sbjct: 180 WLTKVVGTGCLSGAIVAAFASLKTDDFLEVIGYGLVAYGVAAEKAYEETKAKGYGSFQTA 239
Query: 245 LYDWLYRIDGEVIRKYAK 262
+ L R+ E ++++ +
Sbjct: 240 FLNQLGRLTDEDVKQHGR 257
>gi|11499657 hydroxyethylthiazole kinase (thiM) [Archaeoglobus fulgidus]
>gi|9910883|sp|O28204|THIM_ARCFU HYDROXYETHYLTHIAZOLE
KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE KINASE)
(THZ KINASE) (TH KINASE) >gi|7434091|pir||B69509
hydroxyethylthiazole kinase (EC 2.7.1.50) -
Archaeoglobus fulgidus >gi|2648451|gb|AAB89174.1|
(AE000960) hydroxyethylthiazole kinase (thiM)
[Archaeoglobus fulgidus]
Length = 268
Score = 189 bits (476), Expect = 2e-47
Identities = 101/241 (41%), Positives = 156/241 (63%), Gaps = 4/241 (1%)
Query: 18 KPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTLDSWWRKS 77
KP+VH+ITN+V MN +AN +A+GASP+M+ A E++E++ +A +++INIGTLD + ++
Sbjct: 21 KPVVHHITNYVAMNDSANITIAIGASPIMSFAHGEIDELVSIASSLLINIGTLDEYIIQA 80
Query: 78 MIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGNFGEISSLLGEFGKT 137
++ AV+ A P++LDPVG+GATKLRT AL + + GV V+KGN GEI SLL + G
Sbjct: 81 VMLAVKSAKSKGVPVLLDPVGSGATKLRTSTALSVAEEGVDVIKGNQGEILSLLRKEGVV 140
Query: 138 RGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKLLERVTGTG 197
RGVD S+ E A V A++F V TG D +SDG V+ + NG ++L R+T +G
Sbjct: 141 RGVD-SKVTAEAADV--KEVARKFGLVVVATGKEDLISDGRSVYVMRNGTEMLGRITASG 197
Query: 198 CIVTAITGAFVAVTEP-LRAAISSLVVFGIAAEKAYEEAKYPGSFHVKLYDWLYRIDGEV 256
C++ ++ +F+AV + L A++ L + +A E A E++ SF L D + +I E
Sbjct: 198 CMLGSVIASFMAVQKDFLLASLEGLACYNVAGELAAEKSSGTASFRSNLIDEISKITAEK 257
Query: 257 I 257
+
Sbjct: 258 V 258
>sp|Q57233|THIM_HAEIN HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|1074395|pir||H64151
hydroxyethylthiazole kinase (EC 2.7.1.50) - Haemophilus
influenzae (strain Rd KW20) >gi|1573389|gb|AAC22073.1|
(U32725) hydroxyethylthiazole kinase [Haemophilus
influenzae Rd]
Length = 265
Score = 183 bits (461), Expect = 1e-45
Identities = 102/259 (39%), Positives = 164/259 (62%), Gaps = 5/259 (1%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L+++R++ PL+HNITN V N +AN LLALGASP+M+ EE++E+ ++ A+VINIGTL
Sbjct: 8 LSKIREQNPLIHNITNIVAANFSANGLLALGASPLMSANVEEMQEVPKISQALVINIGTL 67
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEISS 129
R++M++A + ANE+ P+VLDPVG GAT R + E+L + +++GN GE+++
Sbjct: 68 IGKDREAMLQAGKTANEVGIPVVLDPVGVGATSYRRETIRELLAEVKFALIRGNAGELAA 127
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
+ GE + +GVD+ + E K +A A+ + TV ++GAVD VSDG + ++NG L
Sbjct: 128 IAGETWQAKGVDAGQ-GEVDLKAVAEKVAQRYGCTVLISGAVDIVSDGTQTATVHNGTSL 186
Query: 190 LERVTGTGCIVTAITGAFVAVTEP--LRAAISSLVVFGIAAEKAYEE-AKYPGSFHVKLY 246
+VT +GC+++A+ AF+AV+E A + + V + IA E A + G F ++L
Sbjct: 187 FPKVTASGCLLSAVCAAFLAVSEGNYFSATLEACVAYTIAGECAAQGLTTQVGQFQIRLL 246
Query: 247 DWLYRIDGEVIRKYAKVRE 265
D L + E I + ++ E
Sbjct: 247 DELAALSPETIGQRGRINE 265
>dbj|BAB03021.1| (AP001297) hydoxyethylthiazole kinase-like protein [Arabidopsis
thaliana]
Length = 276
Score = 180 bits (453), Expect = 1e-44
Identities = 103/260 (39%), Positives = 150/260 (57%), Gaps = 4/260 (1%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L VR++ PLV ITNFV M+ AN LL+ GASP M H+ E+ + A+ +N+GTL
Sbjct: 18 LTAVRQQSPLVQCITNFVSMDLVANTLLSAGASPAMVHSVVEIPDFTPHIHALCVNVGTL 77
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGNFGEISSL 130
W SM A E+A++++KP VLDP + R K LE+++ TV+KGN EI +L
Sbjct: 78 TPDWLPSMKAAAELASQLRKPWVLDPAAVSCSGFRLKACLELIELKPTVIKGNGSEIIAL 137
Query: 131 -LGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
G+T+G DSS ++ A A S A VAV+GAVD V+DG +V ++NG K+
Sbjct: 138 SSASRGQTKGADSS-HESTDAIEAAKSLAMSSGAVVAVSGAVDIVTDGKQVIGVHNGTKM 196
Query: 190 LERVTGTGCIVTAITGAFVAV--TEPLRAAISSLVVFGIAAEKAYEEAKYPGSFHVKLYD 247
++++T TGC + + AF+A+ + L A +S++ VFGIA E A P S + L D
Sbjct: 197 MQQITATGCSLAGLIVAFLAIDSSRVLEATVSAMAVFGIAGELGEAMANGPASLRMHLID 256
Query: 248 WLYRIDGEVIRKYAKVREVG 267
LY +D + K V +G
Sbjct: 257 CLYGLDETTVLKRVNVTRLG 276
>sp|Q9RGS6|THIM_STACA HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE)
>gi|6707003|gb|AAF25543.1|AF109218_3 (AF109218) ThiM
[Staphylococcus carnosus]
Length = 264
Score = 170 bits (426), Expect = 2e-41
Identities = 101/261 (38%), Positives = 151/261 (57%), Gaps = 7/261 (2%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L+++R PLV TN VV N TAN LL+LGASP M+ A +E E+ +A +V+INIGTL
Sbjct: 5 LDQIRTEHPLVICYTNDVVKNFTANGLLSLGASPTMSEAPQEAEDFYPVAGSVLINIGTL 64
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDR-GVTVLKGNFGEISS 129
+M++ +IANE + P+V DPV GA+K R L + TV+KGN EI +
Sbjct: 65 TKHHEHAMLENAKIANETETPLVFDPVAVGASKYRKDFCKYFLKKIKPTVIKGNASEILA 124
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
L+ + +G DS+ D +A A KE+ T + +TG D + KV + NG
Sbjct: 125 LIDDTATMKGTDSA--DNLDVVDIAEKAYKEYQTAIILTGETDVIVQDNKVVKLSNGSHF 182
Query: 190 LERVTGTGCIVTAITGAFV-AVTEP-LRAAISSLVVFGIAAEKAYE--EAKYPGSFHVKL 245
L ++TG GC++ A+ GAF+ T P + I ++ V+ IAAE+A + ++K PG+F +
Sbjct: 183 LAKITGAGCLLGAVVGAFLFRNTHPSIETLIEAVSVYNIAAERAEQLSDSKGPGTFLTQF 242
Query: 246 YDWLYRIDGEVIRKYAKVREV 266
D LYRID + + + + EV
Sbjct: 243 IDALYRIDSDAVAENCNLEEV 263
>sp|Q9ZKZ9|THIM_HELPJ HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|7434090|pir||A71890
hydroxyethylthiazole kinase - Helicobacter pylori
(strain J99) >gi|4155339|gb|AAD06352.1| (AE001508)
HYDROXYETHYLTHIAZOLE KINASE [Helicobacter pylori J99]
Length = 259
Score = 156 bits (390), Expect = 3e-37
Identities = 91/237 (38%), Positives = 142/237 (59%), Gaps = 8/237 (3%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L E+R+++PLVHNITN+VV AN LLALG SP+M+ A E+ ++ ++DA+ INIGTL
Sbjct: 2 LKELRQKRPLVHNITNYVVAQFVANGLLALGVSPLMSDAIAEMPDLAKISDALAINIGTL 61
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILD-RGVTVLKGNFGEISS 129
+ +A++ + KPIVLDPVG A+ LR +LE+L+ +G++ L+GN E+ S
Sbjct: 62 NERTILCAKEAIKRYKALNKPIVLDPVGCSASALRYDTSLELLESKGISTLRGNAAELGS 121
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
L+G +++G+DS + AA++++ +TG DYVSDG KV +I G +
Sbjct: 122 LVGISCESKGLDSKH--SATPIEIVKRAAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEY 179
Query: 190 LERVTGTGCIVTAITGAFVAV-TEPLRAAISSLVVFGIAA----EKAYEEAKYPGSF 241
L +TG GC+ A +F+++ +PL + + + AA +KA E GSF
Sbjct: 180 LAAITGAGCLHAAACASFLSLKKDPLDSMVQLCAFYKQAAFSAQKKALENNGSNGSF 236
>sp|P40386|THI4_SCHPO PROBABLE THIAMINE BIOSYNTHETIC BIFUNCTIONAL ENZYME [INCLUDES:
THIAMINE-PHOSPHATE PYROPHOSPHORYLASE (TMP
PYROPHOSPHORYLASE) (TMP-PPASE); HYDROXYETHYLTHIAZOLE
KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE KINASE)
(THZ KINASE) (TH KINASE)] >gi|629908|pir||S44183
thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) /
hydroxyethylthiazole kinase (EC 2.7.1.50) thi4 - fission
yeast (Schizosaccharomyces pombe)
>gi|473357|emb|CAA55402.1| (X78824) thi4
[Schizosaccharomyces pombe] >gi|2388929|emb|CAB11664.1|
(Z98977) probable thiamine biosynthetic bifunctional
enzyme [includes:thiamine-phosphate pyrophosphorylase]
[Schizosaccharomyces pombe]
Length = 518
Score = 155 bits (389), Expect = 4e-37
Identities = 96/267 (35%), Positives = 153/267 (56%), Gaps = 14/267 (5%)
Query: 4 LNFIVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAV 63
LN I AL +++ PL+H++TN V N +AN LA SP M + +E+ + A+
Sbjct: 239 LNQIPAALQKLKDFTPLIHHLTNAVAKNFSANVTLAAYGSPTMGESYDEVADFAKAPGAL 298
Query: 64 VINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRG-VTVLKG 122
V+NIG L++ K+ I A ++ N++ +P++LDPV GAT R+KV +L+ ++KG
Sbjct: 299 VLNIGILEN--TKTYIHAAQVNNDLARPVILDPVAVGATTARSKVINTLLNYAYYDIIKG 356
Query: 123 NFGEISSLLGEFGKTRGVDSSEYDEEKAKVLAL-SAAKEFNTTVAVTGAVDYVSDGGKVF 181
N GEI +L GE G RGVDS A++ A+ A E VA++GAVD +SDG +
Sbjct: 357 NEGEIMNLAGEQGLMRGVDSISQHTLAARITAVHRLAVERRCVVAMSGAVDVISDGNSTY 416
Query: 182 AIYNGHKLLERVTGTGCIVTAITG--AFVAVTEPLRAAISSLVVFGIAAEKAYEE----- 234
I NG+ LL ++T +GC + ++ G A + + L AAI++ +++ IA+E A E
Sbjct: 417 VIKNGNPLLGQITASGCSLGSVMGVTASICQNDKLLAAITATLLYNIASELAVEAKNSCG 476
Query: 235 ---AKYPGSFHVKLYDWLYRIDGEVIR 258
+ PG+F D L+++ E I+
Sbjct: 477 DLLVQGPGTFIPIFVDKLHQLINETIK 503
>pir||E64625 hydroxyethylthiazole kinase (EC 2.7.1.50) - Helicobacter pylori
(strain 26695) >gi|2313976|gb|AAD07891.1| (AE000595)
thiamin phosphate pyrophosphorylase/hyroxyethylthiazole
kinase (thiM) [Helicobacter pylori 26695]
Length = 273
Score = 154 bits (385), Expect = 1e-36
Identities = 91/237 (38%), Positives = 142/237 (59%), Gaps = 8/237 (3%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L E+R+++PLVHNITN+V AN LLALGASP+M+ A +E+ ++ ++DA+ INIGTL
Sbjct: 16 LKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRDLAKISDALAINIGTL 75
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEISS 129
+ +A++ + KPIVLDPVG A+ LR +LE+L G++ L+GN E+ S
Sbjct: 76 NDRAILCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKSGGISALRGNAAELGS 135
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
L+G +++G+DS+ D + AA++++ +TG DYVSDG KV +I G +
Sbjct: 136 LVGISCESKGLDSN--DAATPVEIIKLAAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEY 193
Query: 190 LERVTGTGCIVTAITGAFVAV-TEPLRAAISSLVVFGIAA----EKAYEEAKYPGSF 241
L +TG GC+ A +F+++ +PL + ++ AA +K E GSF
Sbjct: 194 LALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKVLENNGSNGSF 250
>sp|O25516|THIM_HELPY HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE)
Length = 259
Score = 154 bits (385), Expect = 1e-36
Identities = 91/237 (38%), Positives = 142/237 (59%), Gaps = 8/237 (3%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L E+R+++PLVHNITN+V AN LLALGASP+M+ A +E+ ++ ++DA+ INIGTL
Sbjct: 2 LKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRDLAKISDALAINIGTL 61
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEIL-DRGVTVLKGNFGEISS 129
+ +A++ + KPIVLDPVG A+ LR +LE+L G++ L+GN E+ S
Sbjct: 62 NDRAILCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKSGGISALRGNAAELGS 121
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
L+G +++G+DS+ D + AA++++ +TG DYVSDG KV +I G +
Sbjct: 122 LVGISCESKGLDSN--DAATPVEIIKLAAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEY 179
Query: 190 LERVTGTGCIVTAITGAFVAV-TEPLRAAISSLVVFGIAA----EKAYEEAKYPGSF 241
L +TG GC+ A +F+++ +PL + ++ AA +K E GSF
Sbjct: 180 LALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKVLENNGSNGSF 236
>sp|P76423|THIM_ECOLI HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE) >gi|7427961|pir||G64977
hydroxyethylthiazole kinase (EC 2.7.1.50) - Escherichia
coli (strain K-12) >gi|1736828|dbj|BAA15972.1| (D90848)
Thi4 protein [Escherichia coli]
>gi|1788421|gb|AAC75165.1| (AE000299)
hydoxyethylthiazole kinase [Escherichia coli K12]
Length = 262
Score = 146 bits (366), Expect = 2e-34
Identities = 93/248 (37%), Positives = 132/248 (52%), Gaps = 2/248 (0%)
Query: 10 ALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGT 69
AL+ + PLVH +TN VV TAN LLALGASP M EE + +A A++IN+GT
Sbjct: 14 ALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGT 73
Query: 70 LDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGNFGEISS 129
L ++M AVE A + P LDPV GA R E+L ++GN EI +
Sbjct: 74 LTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMA 133
Query: 130 LLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKL 189
L G RGVD+++ A A + A+E V VTG +DYV+DG ++ I+ G L
Sbjct: 134 LAGIANGGRGVDTTD-AAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPL 192
Query: 190 LERVTGTGCIVTAITGAFVAVT-EPLRAAISSLVVFGIAAEKAYEEAKYPGSFHVKLYDW 248
+ +V GTGC ++A+ A A+ + L S+ A E+A ++ PGSF D
Sbjct: 193 MTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDA 252
Query: 249 LYRIDGEV 256
L+++ EV
Sbjct: 253 LWQLTQEV 260
>sp|P55883|THIM_SALTY HYDROXYETHYLTHIAZOLE KINASE (4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE
KINASE) (THZ KINASE) (TH KINASE)
>gi|1842117|gb|AAB66491.1| (U87940) hydroxyethyl
thiazole kinase [Salmonella typhimurium]
Length = 265
Score = 145 bits (362), Expect = 5e-34
Identities = 94/250 (37%), Positives = 133/250 (52%), Gaps = 10/250 (4%)
Query: 11 LNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTL 70
L R PL H +TN VV TAN LLALGASP M E +A+A++IN+GTL
Sbjct: 15 LKHFRALSPLTHCMTNDVVQTFTANTLLALGASPAMVIDPVEARPFAAIANALLINVGTL 74
Query: 71 DSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGNFGEISSL 130
+ +M AVE A + K P LDPV GA + R + L++L ++GN EI +L
Sbjct: 75 TASRADAMRAAVESAYDAKTPWTLDPVAVGALEFRRRFCLDLLSLRPAAIRGNASEILAL 134
Query: 131 LGEFGKTRGVDSSEYDEEKAKVLALSA----AKEFNTTVAVTGAVDYVSDGGKVFAIYNG 186
G RGVD++E A + AL A A++ + V VTG +DYV++G + +I G
Sbjct: 135 SGMALGGRGVDTTE-----AALAALPAAQALARQIDCIVVVTGEIDYVTNGQRTLSIPGG 189
Query: 187 HKLLERVTGTGCIVTAITGAFVAVT-EPLRAAISSLVVFGIAAEKAYEEAKYPGSFHVKL 245
L+ R+ GTGC ++A+ A A+ L S+ +A + A E ++ PGSF
Sbjct: 190 DPLMTRIVGTGCALSAVVAASCALPGAALDNVASACCWMKLAGQAAAERSEGPGSFIPAF 249
Query: 246 YDWLYRIDGE 255
D LY +D E
Sbjct: 250 LDALYHLDVE 259
>dbj|BAA76743.1| (D88442) hydoxyethylthiazole kinase [Escherichia coli]
Length = 235
Score = 134 bits (335), Expect = 8e-31
Identities = 86/234 (36%), Positives = 122/234 (51%), Gaps = 2/234 (0%)
Query: 24 ITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADAVVINIGTLDSWWRKSMIKAVE 83
+TN VV TAN LLALGASP M EE + +A A++IN+GTL ++M AVE
Sbjct: 1 MTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVE 60
Query: 84 IANEMKKPIVLDPVGAGATKLRTKVALEILDRGVTVLKGNFGEISSLLGEFGKTRGVDSS 143
A + P LDPV GA R E+L ++GN EI +L G RGVD++
Sbjct: 61 QAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTT 120
Query: 144 EYDEEKAKVLALSAAKEFNTTVAVTGAVDYVSDGGKVFAIYNGHKLLERVTGTGCIVTAI 203
+ A A + A+E V VTG +DYV+DG ++ I+ G L+ +V GTGC + +
Sbjct: 121 D-AAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALXXV 179
Query: 204 TGAFVAVT-EPLRAAISSLVVFGIAAEKAYEEAKYPGSFHVKLYDWLYRIDGEV 256
A A+ + L S+ A E+A ++ PGSF D L+++ EV
Sbjct: 180 VAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEV 233
>dbj|BAA89257.1| (AB024693) OrfG [Leptospira interrogans serovar
icterohaemorrhagiae]
Length = 211
Score = 127 bits (317), Expect = 1e-28
Identities = 78/211 (36%), Positives = 121/211 (56%), Gaps = 2/211 (0%)
Query: 46 MAHAEEELEEMIGLADAVVINIGTLDSWWRKSMIKAVEIANEMKKPIVLDPVGAGATKLR 105
M A+EE E +A ++INIGT+ S +M A E A++ K P VLDPV GA R
Sbjct: 1 MVIAKEEAGEFAKIASGLLINIGTVTSNDAITMKIAAEAAHQAKIPWVLDPVAVGALGFR 60
Query: 106 TKVALEILDRGVTVLKGNFGEISSLLGEFGKTRGVDSSEYDEEKAKVLALSAAKEFNTTV 165
T++A E+L+ TV++GN EI +L G G +GVDS+ + A LA A++ +
Sbjct: 61 TELAKELLNFKPTVIRGNASEILALAGTDGGGKGVDSTALSSD-ALPLAQMLAEKTGAVI 119
Query: 166 AVTGAVDYVSDGGKVFAIYNGHKLLERVTGTGCIVTAITGAFVAV-TEPLRAAISSLVVF 224
A++G +DYV++G + +I G ++ +VTG GC + + +F+ V +PLRA ++ VF
Sbjct: 120 AISGEIDYVTNGKETISISGGDPIMTKVTGVGCSLGGVIASFLGVQKDPLRATATASAVF 179
Query: 225 GIAAEKAYEEAKYPGSFHVKLYDWLYRIDGE 255
IA ++ + +K GSF V D L + E
Sbjct: 180 AIAGTRSAKISKGSGSFAVNFLDQLNLLSTE 210
>gi|6325042 TMP pyrophosphorylase, hydroxyethylthiazole kinase; Thi6p
[Saccharomyces cerevisiae]
>gi|1174673|sp|P41835|THI6_YEAST THIAMINE BIOSYNTHETIC
BIFUNCTIONAL ENZYME [INCLUDES: THIAMINE-PHOSPHATE
PYROPHOSPHORYLASE (TMP PYROPHOSPHORYLASE) (TMP-PPASE);
HYDROXYETHYLTHIAZOLE KINASE
(4-METHYL-5-BETA-HYDROXYETHYLTHIAZOLE KINASE) (THZ
KINASE) (TH KINASE)] >gi|1078413|pir||A55145
thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) /
hydroxyethylthiazole kinase (EC 2.7.1.50) THI6 - yeast
(Saccharomyces cerevisiae) >gi|633125|dbj|BAA06703.1|
(D31908) thiamin biosynthetic bifunctional enzyme
[Saccharomyces cerevisiae] >gi|1370444|emb|CAA97929.1|
(Z73570) ORF YPL214c [Saccharomyces cerevisiae]
Length = 540
Score = 99.1 bits (243), Expect = 5e-20
Identities = 80/276 (28%), Positives = 137/276 (48%), Gaps = 33/276 (11%)
Query: 7 IVEALNEVRKRKPLVHNITNFVVMNTTANALLALGASPVMAHAEEELEEMIGLADA-VVI 65
I +++V +PLV +ITN V N AN LALG+SP+M+ E E+ E+ + +A +++
Sbjct: 251 IQNVISQVSNNRPLVQHITNKVHQNFGANVTLALGSSPIMSEIESEVSELARIPNASLLL 310
Query: 66 NIGTLDSWWRKSMIK-AVEIANEMKKPIVLDPVGAGATKLRTKVALEILDRG-VTVLKGN 123
N G++ M+K A+ NE+ +PI DPVG AT+ R + +L G +KGN
Sbjct: 311 NTGSVAP---IEMLKAAINAYNEVNRPITFDPVGYSATETRLCLNNTLLTYGQFACIKGN 367
Query: 124 FGEISSLLG-EFGKTRGVDSSEYDEEKAKVLALS--AAKEFNTTVAVTGAVDYVSDG--G 178
EI SL K +GVDSS ++ + A ++ T TG D V+DG G
Sbjct: 368 CSEILSLAKLNNHKMKGVDSSSGKTNIDTLVRATQIVAFQYRTVAVCTGEFDCVADGTFG 427
Query: 179 KVFAIYNGHK------------------LLERVTGTGCIVTAITGAFV----AVTEPLRA 216
+ + +G + ++ +T +GC + + +F+ + + A
Sbjct: 428 GEYKLSSGTEGITAEDLPCVIIEDGPIPIMGDITASGCSLGSTIASFIGGLDSTGKLFDA 487
Query: 217 AISSLVVFGIAAEKAYEEAKYPGSFHVKLYDWLYRI 252
+ +++++ A + A + GSFHV+L D LY++
Sbjct: 488 VVGAVLLYKSAGKLASTRCQGSGSFHVELIDALYQL 523
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.135 0.375
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90015569
Number of Sequences: 2977
Number of extensions: 3421715
Number of successful extensions: 14275
Number of sequences better than 1.0e-10: 19
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14220
Number of HSP's gapped (non-prelim): 19
length of query: 268
length of database: 189,106,746
effective HSP length: 59
effective length of query: 209
effective length of database: 153,796,013
effective search space: 32143366717
effective search space used: 32143366717
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)