BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2433 (PAB1681) DE:GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE
related protein
(424 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75080 glucose-1-phosphate thymidylyltransferase related pr... 840 0.0
pir||E71065 hypothetical protein PH1219 - Pyrococcus horikoshii ... 689 0.0
pir||H70418 glucose-1-phosphate thymidylyltransferase - Aquifex ... 460 e-128
gi|11497879 A. fulgidus predicted coding region AF0263 [Archaeog... 423 e-117
gi|11499880 A. fulgidus predicted coding region AF2299 [Archaeog... 130 4e-29
pir||E72632 hypothetical protein APE1516 - Aeropyrum pernix (str... 91 2e-17
gi|11498742 glucose-1-phosphate cytidylyltransferase (rfbF) [Arc... 82 1e-14
pir||D75005 cdp-diacylglycerol--glycerol-3-phosphate 3 -phosphat... 80 5e-14
sp|O58215|Y460_PYRHO HYPOTHETICAL PROTEIN PH0460 >gi|7450723|pir... 79 1e-13
gi|11499333 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphati... 75 1e-12
>pir||D75080 glucose-1-phosphate thymidylyltransferase related protein PAB2433 -
Pyrococcus abyssi (strain Orsay)
>gi|5458457|emb|CAB49945.1| (AJ248286)
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE related
protein [Pyrococcus abyssi]
Length = 424
Score = 840 bits (2146), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MKAVILAAGYGTRMGEKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYEEF 60
MKAVILAAGYGTRMGEKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYEEF
Sbjct: 1 MKAVILAAGYGTRMGEKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYEEF 60
Query: 61 LKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGLIA 120
LKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGLIA
Sbjct: 61 LKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGLIA 120
Query: 121 DRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKEVV 180
DRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKEVV
Sbjct: 121 DRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKEVV 180
Query: 181 ELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKIST 240
ELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKIST
Sbjct: 181 ELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKIST 240
Query: 241 RISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARARMQ 300
RISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARARMQ
Sbjct: 241 RISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARARMQ 300
Query: 301 TSKFGGYFDSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC 360
TSKFGGYFDSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC
Sbjct: 301 TSKFGGYFDSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC 360
Query: 361 VDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKTRYA 420
VDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKTRYA
Sbjct: 361 VDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKTRYA 420
Query: 421 QDEG 424
QDEG
Sbjct: 421 QDEG 424
>pir||E71065 hypothetical protein PH1219 - Pyrococcus horikoshii
>gi|3257636|dbj|BAA30319.1| (AP000005) 423aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 423
Score = 689 bits (1758), Expect = 0.0
Identities = 323/417 (77%), Positives = 383/417 (91%)
Query: 1 MKAVILAAGYGTRMGEKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYEEF 60
MKAVILAAGYGTRMGEK KGLIK+AGRE++YRTI+NL+K GI EF+IVTNE+Y++ YE F
Sbjct: 1 MKAVILAAGYGTRMGEKPKGLIKVAGRELIYRTIRNLIKLGITEFIIVTNEKYREFYERF 60
Query: 61 LKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGLIA 120
+K I ++VN NPERGNGFSLH+AKDYVSG+FVLVMSDHVYEE+FYE+A+ GEGLIA
Sbjct: 61 VKENKINAKIIVNQNPERGNGFSLHVAKDYVSGRFVLVMSDHVYEEKFYELAINGEGLIA 120
Query: 121 DRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKEVV 180
DR P+YVDV+EATKVK+E R++EIGK LKEW+A+DTGFFILDDSIF++T++L QEKEVV
Sbjct: 121 DRNPKYVDVEEATKVKIEGMRVVEIGKKLKEWNAVDTGFFILDDSIFEITTRLVQEKEVV 180
Query: 181 ELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKIST 240
EL+DVVKE KLKVTFVDGLFWMDVDTPE++KKA+KLIV SVKGVGDGFISR+LNRK+ST
Sbjct: 181 ELRDVVKEAKLKVTFVDGLFWMDVDTPEELKKAKKLIVAHSVKGVGDGFISRYLNRKVST 240
Query: 241 RISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARARMQ 300
IS+ LV+HVTPNQMT++TF FGI SAL+NF+++P+AGILYQ+SSILDGVDGEIARARMQ
Sbjct: 241 WISSHLVDHVTPNQMTLITFTFGIISALVNFVNIPLAGILYQISSILDGVDGEIARARMQ 300
Query: 301 TSKFGGYFDSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC 360
TSKFGGYFDSILDRYVD +FLL LAYVS+ +PLWW++A +A+FSSAMVSYSTERF+GAYC
Sbjct: 301 TSKFGGYFDSILDRYVDLSFLLTLAYVSLADPLWWSVATLAIFSSAMVSYSTERFRGAYC 360
Query: 361 VDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKT 417
DAYKVIPALRK+PGKRDERIF M+ TL+GWIKALF++LAIWST RVI+T+YLV+T
Sbjct: 361 ADAYKVIPALRKIPGKRDERIFTIMIFTLLGWIKALFILLAIWSTLRVIITIYLVRT 417
>pir||H70418 glucose-1-phosphate thymidylyltransferase - Aquifex aeolicus
>gi|2983786|gb|AAC07344.1| (AE000737)
glucose-1-phosphate thymidylyltransferase [Aquifex
aeolicus]
Length = 428
Score = 460 bits (1172), Expect = e-128
Identities = 228/421 (54%), Positives = 313/421 (74%), Gaps = 12/421 (2%)
Query: 3 AVILAAGYGTRMG----EKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYE 58
AVILA G G R+ E K L+K+AGRE++YRTIK L G+ FVIV N++++ +
Sbjct: 5 AVILAGGEGNRLKPLTEEVPKALLKVAGRELLYRTIKQLQDVGVKNFVIVVNKKFEGKVK 64
Query: 59 EFLKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGL 118
FLK +N + V+ N +PE+ NG+SL++AK + G+F +VMSDH+YE+ F E AV+G+GL
Sbjct: 65 AFLKEHNFEAEVIPNEHPEKENGYSLYLAKGRIKGEFAVVMSDHIYEKAFLEKAVEGKGL 124
Query: 119 IADRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKE 178
I DR Y++ +EATKVK E+ RI IGK L+++D DTGFF+LD+SIF+V + +E++
Sbjct: 125 IVDRLGLYINKNEATKVKCEEGRIKYIGKNLEKYDGFDTGFFVLDESIFEVAEEALKEQK 184
Query: 179 VVELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKI 238
+ + ++ K ++ T V G FWMDVDTPED++KA+K +V T++KGVGDGFISR+LNRK+
Sbjct: 185 KLTMSELAKRAQIPCTEVSGYFWMDVDTPEDVEKAKKYLVKTAIKGVGDGFISRNLNRKV 244
Query: 239 STRISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARAR 298
STRIS LV+ TPNQ+T++TFL G+FSAL+ + S + GIL Q++S+LDG+DGE+ARA+
Sbjct: 245 STRISPYLVDKFTPNQLTVLTFLLGMFSALVAYFSPALGGILLQINSMLDGLDGEVARAQ 304
Query: 299 MQTSKFGGYFDSILDRYVDFTFLLILAYVSIREPLW----WAIAAIAMFSSAMVSYSTER 354
M+T+KFG + DS+LDRYVDF FL LA +P W W A A+F S MVSYSTER
Sbjct: 305 MRTTKFGAWLDSVLDRYVDFAFLSALA--MHLKPSWDFMPWVFA--ALFGSVMVSYSTER 360
Query: 355 FKGAYCVDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYL 414
+KGAYC DAY VI LR + GKRDERIF+ M+ T++GWIKALF++LAI + RVI+T+YL
Sbjct: 361 YKGAYCEDAYAVIKELRYLLGKRDERIFMIMIFTILGWIKALFVVLAIITNLRVILTIYL 420
Query: 415 V 415
V
Sbjct: 421 V 421
>gi|11497879 A. fulgidus predicted coding region AF0263 [Archaeoglobus fulgidus]
>gi|7429846|pir||G69282 hypothetical protein AF0263 -
Archaeoglobus fulgidus >gi|2650378|gb|AAB90972.1|
(AE001087) A. fulgidus predicted coding region AF0263
[Archaeoglobus fulgidus]
Length = 490
Score = 423 bits (1077), Expect = e-117
Identities = 219/420 (52%), Positives = 297/420 (70%), Gaps = 11/420 (2%)
Query: 1 MKAVILAAGYGTRMGEKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDAYEEF 60
MKAVILAAG GTR+G K L+++ G EI+ RT+K L+ + EF+IV + RY D + F
Sbjct: 73 MKAVILAAGLGTRLGGVPKPLVRVGGCEIILRTMK-LLSPHVSEFIIVAS-RYADDIDAF 130
Query: 61 LKRYNIKGTVVVNPNPERGNGFSLHIAKDYVSGKFVLVMSDHVYEERFYEVAVKGEGLIA 120
LK +V + PE+GNG+SL +AK++V +F+L M DHVY ++F E AV+GEG+IA
Sbjct: 131 LKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDRFILTMGDHVYSQQFIEKAVRGEGVIA 190
Query: 121 DRRPRYVDVDEATKVKVEKDRIIEIGKGLKEWDALDTGFFILDDSIFDVTSKLAQEKEVV 180
DR PR+VD+ EATK++VE R+ +IGK L+E+D +DTGFF+LDDSIF+ KL +++E +
Sbjct: 191 DREPRFVDIGEATKIRVEDGRVAKIGKDLREFDCVDTGFFVLDDSIFEHAEKL-RDREEI 249
Query: 181 ELKDVVKEVKLKVTFVDGLFWMDVDTPEDIKKARKLIVYTSVKGVGDGFISRHLNRKIST 240
L ++VK +L VT+VDG WMDVDT ED+++A + +V +VKG GDGFISR +NRKIST
Sbjct: 250 PLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRALVSAAVKGSGDGFISRKINRKIST 309
Query: 241 RISALLVEHVTPNQMTIVTFLFGIFSALMNFISVPIAGILYQVSSILDGVDGEIARARMQ 300
RISA +V V PNQMT+++FL G FSAL +F S+P+AG+LYQ SSILDG DGEIARA ++
Sbjct: 310 RISAAIVNKVNPNQMTLISFLVGAFSALASFFSIPLAGLLYQFSSILDGCDGEIARASLK 369
Query: 301 TSKFGGYFDSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC 360
SK GGY DSILDR+VDF FL I+A + P +A A+F S MVSY++E++K +
Sbjct: 370 MSKKGGYVDSILDRFVDFLFLAIIA---LLYPKTATVAMFAIFGSVMVSYTSEKYKAEFG 426
Query: 361 VDAYKVIPALRKVPGKRDERIFLTMLLTLVG-----WIKALFLILAIWSTFRVIVTVYLV 415
+ L +PGKRDERIFL M+ L+ WI +FL +A S RV+VT+ V
Sbjct: 427 ESIFGKFRVLNYIPGKRDERIFLIMIFCLLSAISLQWIFWMFLFVAAISLTRVVVTLLAV 486
>gi|11499880 A. fulgidus predicted coding region AF2299 [Archaeoglobus fulgidus]
>gi|7483801|pir||C69537 hypothetical protein AF2299 -
Archaeoglobus fulgidus >gi|2648223|gb|AAB88959.1|
(AE000945) A. fulgidus predicted coding region AF2299
[Archaeoglobus fulgidus]
Length = 344
Score = 130 bits (323), Expect = 4e-29
Identities = 87/297 (29%), Positives = 156/297 (52%), Gaps = 31/297 (10%)
Query: 137 VEKDRIIEIGKGLKEWDALDTGFFILDD--SIFDVTSKLAQEKEVVELKDVVKEVKLKVT 194
+E+D ++E G+ + D G+F D ++FD + + EK + E+
Sbjct: 60 LERDLLLE-GRKILVSDGFTVGYFFGGDFRTVFDGNLQSSIEKYLSLNNLESYEI----- 113
Query: 195 FVDGLFWMDVDTPEDIKKARKLIVYTSVKGVG--------DGFISRHLNRKISTRISALL 246
W + +++K A KL++ + +K DG+I+R +NRK+S RIS LL
Sbjct: 114 ------WAIKLSNDNLKTAEKLLLSSLIKAKRTGLKPAYYDGWIAREINRKVSLRISRLL 167
Query: 247 VE-HVTPNQMTIVTFLFGIFSA----LMNFISVPIAGILYQVSSILDGVDGEIARARMQT 301
+ VTPNQ+T+ +F + + L ++++ +AG++ Q+ SI+DG DGEIAR +
Sbjct: 168 ADTSVTPNQITVFSFFLSLVGSALFLLNSYLTTLLAGVIIQLHSIIDGCDGEIARLKFME 227
Query: 302 SKFGGYFDSILDRYVDFTFLLILAYV-SIREPLWWAIAAIAMFSSAMVSYSTERFKGAYC 360
SK+G + D +LDRY DF + + YV S P++W I +A F+S M++Y+ ++F AY
Sbjct: 228 SKYGAWLDGVLDRYSDFIIVFSITYVLSASNPVYWIIGFLAAFASLMIAYTGDKFVAAY- 286
Query: 361 VDAYKVIPALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKT 417
+ Y P +P RD R+ + ++V +I+A+ F + + +++
Sbjct: 287 MRTYS--PEGFAIPITRDFRLLIIFACSVVNLPSLALVIIALLGNFEALRRIVALRS 341
>pir||E72632 hypothetical protein APE1516 - Aeropyrum pernix (strain K1)
>gi|5105201|dbj|BAA80515.1| (AP000061) 223aa long
hypothetical protein [Aeropyrum pernix]
Length = 223
Score = 91.3 bits (223), Expect = 2e-17
Identities = 63/199 (31%), Positives = 108/199 (53%), Gaps = 15/199 (7%)
Query: 227 DGFISRHLNRKISTRISALLVE---HVTPNQMTIVTFLFGIFSALMNFIS---VPIAGIL 280
DG +SR LNR+I++ I++ ++ +TPN +++++FL +AL FI+ + + G+L
Sbjct: 20 DGPVSRFLNRRIASAIASAIIALNLPLTPNMLSLISFLTAAAAAL--FIAGGQLLVGGLL 77
Query: 281 YQVSSILDGVDGEIARARMQTSKFGGYFDSILDRYVDFTFLLILAYVSIREP--LWWAI- 337
Q+SS+LDGVDG +AR SK GG+ D++LDRY D L LAY ++ WA+
Sbjct: 78 VQLSSVLDGVDGIVARRLRAASKAGGFLDTMLDRYADTVIYLALAYAAVATHGLETWAVL 137
Query: 338 -AAIAMFSSAMVSYSTERFKGAYCVDAYKVIPALRKVPGKRDERIFLTMLLTLVGW-IKA 395
A +A+ MVSY R G + + RD R+ + ++T G ++A
Sbjct: 138 TAVLAVSGDIMVSYLHTR--GERDAGVHPSLVGPLDSLASRDVRLLIVAVITAAGRPLEA 195
Query: 396 LFLILAIWSTFRVIVTVYL 414
+ + + + + ++YL
Sbjct: 196 MAAVALLSHAYVAVKSIYL 214
>gi|11498742 glucose-1-phosphate cytidylyltransferase (rfbF) [Archaeoglobus
fulgidus] >gi|7483308|pir||E69392 glucose-1-phosphate
cytidylyltransferase (rfbF) homolog - Archaeoglobus
fulgidus >gi|2649448|gb|AAB90104.1| (AE001025)
glucose-1-phosphate cytidylyltransferase (rfbF)
[Archaeoglobus fulgidus]
Length = 241
Score = 82.3 bits (200), Expect = 1e-14
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 1 MKAVILAAGYGTRMG----EKAKGLIKIAGREIVYRTIKNLMKQGIGEFVIVTNERYKDA 56
M+AVILAAG+G+R+G E K L+KI R ++Y T++ LM+ GI + V+VT +
Sbjct: 1 MEAVILAAGFGSRLGHHTREIPKALLKIGKRPLIYYTVQTLMENGIRDVVVVTGHK-GYV 59
Query: 57 YEEFLKRYNIKGTVVVNPNPERGNG-FSLHIAKDYVSGKFVLVMSDHVYEERFYEV--AV 113
E+L ++++ V N ++ N +SL++A D+VS F ++ SD ++ + +
Sbjct: 60 LREYLSQFDLNFKFVHNSLYKKTNNIYSLYLAMDHVSKGFYILNSDVLFHPGIFRELHSS 119
Query: 114 KGEGLIADRRPRYVDVDEATKVKVEKDRIIEIGKGL--KEWDALDTGFFILDDSIFD--- 168
E LI +E KVK+E + I K L E D G ++++I D
Sbjct: 120 TKENLILSVDTFKELGEEEMKVKIEDGVVKRISKQLNPSEADGEYIGIARVEENIIDDLY 179
Query: 169 --VTSKLAQEKEVVELKDVVKE-----VKLKVTFVDGLFWMDVDTPEDIKKAR 214
V+ + ++ V ++ + + + GL W+++DTP D+ KAR
Sbjct: 180 NHVSRVMERKGRRVFYEEAFQSMMDDGIAVYYETTKGLPWIEIDTPADLMKAR 232
>pir||D75005 cdp-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase
(pgsa) PAB1041 - Pyrococcus abyssi (strain Orsay)
>gi|5458996|emb|CAB50482.1| (AJ248288)
CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA) [Pyrococcus abyssi]
Length = 186
Score = 80.0 bits (194), Expect = 5e-14
Identities = 55/172 (31%), Positives = 89/172 (50%), Gaps = 15/172 (8%)
Query: 250 VTPNQMTIVTFLFGIFSALMNFISVPI-AGILYQVSSILDGVDGEIARARMQTSKFGGYF 308
+TPNQ+T++ FL + ++ ++ I AG + + S+LD +DG +ARA + S+FGG+
Sbjct: 25 LTPNQVTLLGFLLTLIASYEFYLGNQIVAGTIMAIGSLLDALDGALARATGKVSRFGGFL 84
Query: 309 DSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYCVDAYKVIP 368
DS LDR D L+ +A ++ + W +A +A+ S MVSY A C
Sbjct: 85 DSTLDRLSDGALLVGIALGNLID---WRVAFLALIGSYMVSY-------ARCRAELAGSG 134
Query: 369 ALRKVPGKRDERIFLTMLLTLVG--WIKALFLILAIWSTFRVIVTVYLVKTR 418
L +R ER+ + M+ +L+ WI + + W TF I VY + R
Sbjct: 135 TLAVGIAERGERLIIIMIFSLINRVWIGVYLVAVLSWVTF--IQRVYEARKR 184
>sp|O58215|Y460_PYRHO HYPOTHETICAL PROTEIN PH0460 >gi|7450723|pir||E71157 hypothetical
protein PH0460 - Pyrococcus horikoshii
>gi|3256863|dbj|BAA29546.1| (AP000002) 188aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 188
Score = 78.8 bits (191), Expect = 1e-13
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 250 VTPNQMTIVTFLFGIFSALMNFISVPI-AGILYQVSSILDGVDGEIARARMQTSKFGGYF 308
+TPNQ+TI+ FL + ++ ++ I AGI+ V + LD +DG +ARA + SKFGG+
Sbjct: 25 ITPNQLTIIGFLITLLASYEFYLQNQILAGIILAVGAFLDALDGALARATGKVSKFGGFL 84
Query: 309 DSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYCVDAYKVIP 368
DS +DR D + L +A + + W + + + S MVSYS C
Sbjct: 85 DSTIDRLSDASILFGIALGGL---VRWDVTFLTLIGSYMVSYSR-------CRAELAGSG 134
Query: 369 ALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKTR 418
L +R ERI + + +L +K ++AI S I VY K R
Sbjct: 135 TLAIGIAERGERIIIIFIASLFNAVKIGVYLVAILSWITFIQRVYEAKKR 184
>gi|11499333 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
(pgsA-2) [Archaeoglobus fulgidus]
>gi|7450716|pir||G69467
CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA-2) homolog -
Archaeoglobus fulgidus >gi|2648809|gb|AAB89506.1|
(AE000982) CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase (pgsA-2) [Archaeoglobus
fulgidus]
Length = 172
Score = 75.3 bits (182), Expect = 1e-12
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 250 VTPNQMTIVTFLFGIFSALMNFIS-VPIAGILYQVSSILDGVDGEIARARMQTSKFGGYF 308
V PN +T+ +F + S+ + + A I +SS+ D +DG +AR T+KFGGY
Sbjct: 10 VKPNHLTLAGLVFALISSYLIIEGRILHASIFVLLSSLCDLLDGALARKAELTTKFGGYL 69
Query: 309 DSILDRYVDFTFLLILAYVSIREPLWWAIAAIAMFSSAMVSYSTERFKGAYCVDAYKVIP 368
DS+ DRYVD + L + W A+AM + +VSY+ R A +I
Sbjct: 70 DSVTDRYVDVILFISLGIYGVD----WVAIAMAMSGALLVSYTRAR--------AETIIE 117
Query: 369 ALRKVPGKRDERIFLTMLLTLVGWIKALFLILAIWSTFRVIVTVYLVKTR 418
+R ER+ + +L L G+I LI+A+ S + V +R
Sbjct: 118 KCDVGIAERSERLLILLLGMLTGYIYEAVLIIAVLSHITALHRVVYTYSR 167
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.324 0.141 0.408
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147213186
Number of Sequences: 2977
Number of extensions: 6057127
Number of successful extensions: 14816
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 14795
Number of HSP's gapped (non-prelim): 10
length of query: 424
length of database: 189,106,746
effective HSP length: 55
effective length of query: 369
effective length of database: 156,189,961
effective search space: 57634095609
effective search space used: 57634095609
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (22.0 bits)
S2: 166 (69.1 bits)