BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB7067 (rpl37AE) DE:LSU ribosomal protein L37AE (rpl37AE)
(83 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75218 lsu ribosomal protein l37ae (rpl37ae) PAB7067 - Pyro... 174 2e-43
sp|O74106|R37A_PYRHO 50S RIBOSOMAL PROTEIN L37AE >gi|7441208|pir... 164 1e-40
sp|O26777|R37A_METTH 50S RIBOSOMAL PROTEIN L37AE >gi|7441207|pir... 116 4e-26
gi|11497677 LSU ribosomal protein L37AE (rpl37AE) [Archaeoglobus... 111 2e-24
sp|P54051|R37A_METJA 50S RIBOSOMAL PROTEIN L37AE >gi|2144783|pir... 103 5e-22
gb|AAG18838.1| (AE004988) Vng0239c [Halobacterium sp. NRC-1] 99 9e-21
sp|Q9YC06|R37A_AERPE 50S RIBOSOMAL PROTEIN L37AE >gi|7521373|pir... 90 3e-18
pdb|1FFK|W Chain W, Crystal Structure Of The Large Ribosomal Sub... 87 4e-17
emb|CAC12417.1| (AL445067) probable ribosomal protein L37 [Therm... 80 7e-15
sp|O96184|R37A_PLAFA 60S RIBOSOMAL PROTEIN L37A >gi|7441205|pir|... 79 9e-15
sp|O61598|R37A_OSTOS 60S RIBOSOMAL PROTEIN L37A >gi|2996185|gb|A... 78 3e-14
sp|Q9ZRS8|R37A_PSEMZ 60S RIBOSOMAL PROTEIN L37A >gi|4090257|emb|... 77 3e-14
sp|P43209|R37A_BRARA 60S RIBOSOMAL PROTEIN L37A >gi|421866|pir||... 76 6e-14
pir||JE0321 ribosomal protein, Ddl37a - slime mold (Dictyosteliu... 76 6e-14
sp|Q9XHE4|R37A_GOSHI 60S RIBOSOMAL PROTEIN L37A >gi|4741896|gb|A... 76 1e-13
sp|O94686|RL43_SCHPO 60S RIBOSOMAL PROTEIN L43 (L37) >gi|7490041... 75 1e-13
emb|CAC01519.1| (AL391034) 60s ribosomal protein L37a/L43A [Schi... 75 1e-13
pir||T26996 hypothetical protein Y48B6A.2 - Caenorhabditis elega... 75 2e-13
sp|O17307|R37A_SCHMA 60S RIBOSOMAL PROTEIN L37A >gi|2565332|gb|A... 74 3e-13
sp|O61462|R37A_CRYST 60S RIBOSOMAL PROTEIN L37A >gi|3098458|gb|A... 74 4e-13
gb|AAF52217.1| (AE003608) CG5827 gene product [Drosophila melano... 72 1e-12
emb|CAB86710.1| (AL163505) 60S ribosomal protein L37a [Leishmani... 72 1e-12
gi|6322554 Ribosomal protein L43B; Rpl43bp [Saccharomyces cerevi... 71 2e-12
gb|AAF01526.1|AC009991_22 (AC009991) putative 60S ribosomal prot... 71 3e-12
gi|4506643 ribosomal protein L37a [Homo sapiens] >gi|6677785|ref... 68 2e-11
sp|P32046|R37A_CHICK 60S RIBOSOMAL PROTEIN L37A >gi|283916|pir||... 68 2e-11
dbj|BAA21635.1| (AB005904) ribosomal protein L37 [Schizosaccharo... 66 6e-11
>pir||E75218 lsu ribosomal protein l37ae (rpl37ae) PAB7067 - Pyrococcus abyssi
(strain Orsay) >gi|5457705|emb|CAB49196.1| (AJ248283)
LSU ribosomal protein L37AE (rpl37AE) [Pyrococcus
abyssi]
Length = 83
Score = 174 bits (436), Expect = 2e-43
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG
Sbjct: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
Query: 61 AIFAGGAYLPVTPAGKVAKRVVE 83
AIFAGGAYLPVTPAGKVAKRVVE
Sbjct: 61 AIFAGGAYLPVTPAGKVAKRVVE 83
>sp|O74106|R37A_PYRHO 50S RIBOSOMAL PROTEIN L37AE >gi|7441208|pir||B71204 probable
ribosomal protein L37 - Pyrococcus horikoshii
>gi|3258342|dbj|BAA31025.1| (AP000007) 86aa long
hypothetical 50S ribosomal protein L37 [Pyrococcus
horikoshii]
Length = 86
Score = 164 bits (412), Expect = 1e-40
Identities = 77/83 (92%), Positives = 81/83 (96%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
MSGTKKVGSAGRFG RYGLKIRRRVAAVEAKMRQKHVCPVCGRRAV+RISTGIWQC KCG
Sbjct: 4 MSGTKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCG 63
Query: 61 AIFAGGAYLPVTPAGKVAKRVVE 83
AIFAGGAYLPVTPAGKVA+R++E
Sbjct: 64 AIFAGGAYLPVTPAGKVARRIME 86
>sp|O26777|R37A_METTH 50S RIBOSOMAL PROTEIN L37AE >gi|7441207|pir||G69190 ribosomal
protein L37a - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621766|gb|AAB85186.1| (AE000848)
ribosomal protein L37a [Methanobacterium
thermoautotrophicum]
Length = 89
Score = 116 bits (289), Expect = 4e-26
Identities = 51/83 (61%), Positives = 63/83 (75%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
M+ TKKVG GRFGPRYG K +R V +E +M++KHVCP C R V+R S GIW+C+KCG
Sbjct: 1 MARTKKVGITGRFGPRYGRKAKRAVKKIEEEMKRKHVCPSCDRPGVKRESRGIWKCRKCG 60
Query: 61 AIFAGGAYLPVTPAGKVAKRVVE 83
A+F GGAYLPVTP GK A R ++
Sbjct: 61 AVFTGGAYLPVTPMGKTAARNIK 83
>gi|11497677 LSU ribosomal protein L37AE (rpl37AE) [Archaeoglobus fulgidus]
>gi|3914531|sp|O30179|R37A_ARCFU 50S RIBOSOMAL PROTEIN
L37AE >gi|7441209|pir||A69257 LSU ribosomal protein
L37AE (rpl37AE) homolog - Archaeoglobus fulgidus
>gi|2650586|gb|AAB91165.1| (AE001102) LSU ribosomal
protein L37AE (rpl37AE) [Archaeoglobus fulgidus]
Length = 83
Score = 111 bits (275), Expect = 2e-24
Identities = 49/82 (59%), Positives = 61/82 (73%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
M TKKV SAGRFGPRYGL++RR +EA RQK+VC CG++AV+R TGIW+C+ CG
Sbjct: 1 MGRTKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCG 60
Query: 61 AIFAGGAYLPVTPAGKVAKRVV 82
FAGG Y PVTP GK+ ++ V
Sbjct: 61 YKFAGGCYQPVTPGGKIVEKSV 82
>sp|P54051|R37A_METJA 50S RIBOSOMAL PROTEIN L37AE >gi|2144783|pir||A64374 ribosomal
protein L37a - Methanococcus jannaschii
>gi|1591302|gb|AAB98587.1| (U67508) LSU ribosomal
protein L37AE [Methanococcus jannaschii]
Length = 92
Score = 103 bits (254), Expect = 5e-22
Identities = 49/81 (60%), Positives = 56/81 (68%)
Query: 2 SGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGA 61
S TKKVG GRFGPRYGLKIR RV VE K ++K+ CPVCG ++R ST IW C KCGA
Sbjct: 3 SHTKKVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCGFPKLKRASTSIWVCGKCGA 62
Query: 62 IFAGGAYLPVTPAGKVAKRVV 82
AGGAY P T AGK + +
Sbjct: 63 KIAGGAYTPETGAGKAVMKAI 83
>gb|AAG18838.1| (AE004988) Vng0239c [Halobacterium sp. NRC-1]
Length = 105
Score = 99.1 bits (243), Expect = 9e-21
Identities = 45/82 (54%), Positives = 52/82 (62%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCG 60
M+ GSAGRFG RYG RRRV+ +E M + H CP CG AV R TGIWQC KCG
Sbjct: 11 MANQSSTGSAGRFGARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCG 70
Query: 61 AIFAGGAYLPVTPAGKVAKRVV 82
+AGGAY P TP+GK R +
Sbjct: 71 YKYAGGAYQPQTPSGKTVTRSI 92
>sp|Q9YC06|R37A_AERPE 50S RIBOSOMAL PROTEIN L37AE >gi|7521373|pir||D72623 probable
ribosomal protein L37 APES054 - Aeropyrum pernix
(strain K1) >gi|5105128|dbj|BAA80442.1| (AP000061) 86aa
long hypothetical 50S ribosomal protein L37 [Aeropyrum
pernix]
Length = 86
Score = 90.5 bits (221), Expect = 3e-18
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 1 MSGTKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRR-AVRRISTGIWQCKKC 59
M TK VG AGR+GPRYG+ +R+RV + A+ Q H CP CG VRR+S G+W C+KC
Sbjct: 1 MGRTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKC 60
Query: 60 GAIFAGGAYLPVTPAGKVAKRVV 82
G +AG AY P + K KR +
Sbjct: 61 GNTWAGAAYTPRSGLAKYFKRYI 83
>pdb|1FFK|W Chain W, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 73
Score = 87.0 bits (212), Expect = 4e-17
Identities = 41/70 (58%), Positives = 47/70 (66%)
Query: 11 GRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIFAGGAYLP 70
GRFGPRYGLKIR RV VE K ++K+ CPVCG ++R ST IW C CG AGGAY P
Sbjct: 3 GRFGPRYGLKIRVRVRDVEIKHKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGGAYTP 62
Query: 71 VTPAGKVAKR 80
T AGK +
Sbjct: 63 ETVAGKAVMK 72
>emb|CAC12417.1| (AL445067) probable ribosomal protein L37 [Thermoplasma
acidophilum]
Length = 80
Score = 79.6 bits (193), Expect = 7e-15
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
T KVG AGRFGPRYG+ IR+ + + + + CP C ++ V+R++ GIWQC+ CG F
Sbjct: 5 TVKVGVAGRFGPRYGVTIRKEWSEIYKQKIALYTCPSCKKKRVKRVANGIWQCRHCGYKF 64
Query: 64 AGGAYLP 70
AGG+Y P
Sbjct: 65 AGGSYTP 71
>sp|O96184|R37A_PLAFA 60S RIBOSOMAL PROTEIN L37A >gi|7441205|pir||C71614 ribosomal
protein L37A PFB0455w - malaria parasite (Plasmodium
falciparum) >gi|3845189|gb|AAC71880.1| (AE001396)
ribosomal protein L37A [Plasmodium falciparum]
Length = 96
Score = 79.2 bits (192), Expect = 9e-15
Identities = 33/79 (41%), Positives = 47/79 (58%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+++ +E K++C CG+ A +R GIW+CKKC
Sbjct: 5 TKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCKRKV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
GGA+ TPA AK +
Sbjct: 65 CGGAWSLTTPAAVAAKSTI 83
>sp|O61598|R37A_OSTOS 60S RIBOSOMAL PROTEIN L37A >gi|2996185|gb|AAC08431.1| (AF052737)
60S ribosomal protein [Ostertagia ostertagi]
Length = 91
Score = 77.6 bits (188), Expect = 3e-14
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ V +E ++ CP CG+ A+RR + GIW C KC
Sbjct: 5 TKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCKKTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY+ T A + V
Sbjct: 65 AGGAYVYGTVAAATVRSTV 83
>sp|Q9ZRS8|R37A_PSEMZ 60S RIBOSOMAL PROTEIN L37A >gi|4090257|emb|CAA10493.1| (AJ131732)
ribosomal protein L37A [Pseudotsuga menziesii]
Length = 92
Score = 77.3 bits (187), Expect = 3e-14
Identities = 32/79 (40%), Positives = 46/79 (57%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKK G G++G RYG +R+++ +E K C CG+ AV+R + GIW CK CG +
Sbjct: 5 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVK 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY TP+ + +
Sbjct: 65 AGGAYTLNTPSAVTVRSTI 83
>sp|P43209|R37A_BRARA 60S RIBOSOMAL PROTEIN L37A >gi|421866|pir||S34661 ribosomal
protein L37a, cytosolic - turnip
>gi|347062|gb|AAA51421.1| (L21897) ribosomal protein
[Brassica rapa] >gi|395077|emb|CAA80864.1| (Z24739)
ribosomal protein L37a [Brassica rapa]
Length = 93
Score = 76.5 bits (185), Expect = 6e-14
Identities = 31/65 (47%), Positives = 42/65 (63%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG IR+++ +E K+ C CG+ V+R + GIW CK CG +
Sbjct: 5 TKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVK 64
Query: 64 AGGAY 68
AGGAY
Sbjct: 65 AGGAY 69
>pir||JE0321 ribosomal protein, Ddl37a - slime mold (Dictyostelium discoideum)
Length = 91
Score = 76.5 bits (185), Expect = 6e-14
Identities = 33/79 (41%), Positives = 46/79 (57%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R++V +E + C CG+ AVRR S GIW+C C +
Sbjct: 5 TKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCRKVL 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGA+ T AG + +
Sbjct: 65 AGGAWTMSTAAGATVRSTI 83
>sp|Q9XHE4|R37A_GOSHI 60S RIBOSOMAL PROTEIN L37A >gi|4741896|gb|AAD28753.1|AF127042_1
(AF127042) 60S ribosomal protein L37a [Gossypium
hirsutum]
Length = 92
Score = 75.7 bits (183), Expect = 1e-13
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW CK CG +
Sbjct: 5 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVK 64
Query: 64 AGGAY 68
AGGAY
Sbjct: 65 AGGAY 69
>sp|O94686|RL43_SCHPO 60S RIBOSOMAL PROTEIN L43 (L37) >gi|7490041|pir||T40691 60s
ribosomal protein l43 - fission yeast
(Schizosaccharomyces pombe) >gi|4455775|emb|CAB36864.1|
(AL035536) 60s ribosomal protein L43/L37a-2
[Schizosaccharomyces pombe]
Length = 94
Score = 75.3 bits (182), Expect = 1e-13
Identities = 34/81 (41%), Positives = 47/81 (57%), Gaps = 2/81 (2%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQC--KKCGA 61
TKKVG G++G RYG +RR V +E + ++ CP CGR V+R + GIW+C K C
Sbjct: 5 TKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSK 64
Query: 62 IFAGGAYLPVTPAGKVAKRVV 82
AGGA+ T A A+ +
Sbjct: 65 TLAGGAWTVTTAAATSARSTI 85
>emb|CAC01519.1| (AL391034) 60s ribosomal protein L37a/L43A [Schizosaccharomyces
pombe]
Length = 94
Score = 75.3 bits (182), Expect = 1e-13
Identities = 34/81 (41%), Positives = 47/81 (57%), Gaps = 2/81 (2%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQC--KKCGA 61
TKKVG G++G RYG +RR V +E + ++ CP CGR V+R + GIW C K C
Sbjct: 5 TKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKK 64
Query: 62 IFAGGAYLPVTPAGKVAKRVV 82
+ AGGA+ T A A+ +
Sbjct: 65 VLAGGAWTVTTAAATSARSTI 85
>pir||T26996 hypothetical protein Y48B6A.2 - Caenorhabditis elegans
>gi|5824797|emb|CAB54440.1| (AL110490) predicted using
Genefinder~contains similarity to Pfam domain: PF01780
(Ribosomal L37ae protein family), Score=200.8,
E-value=7e-57, N=1~cDNA EST yk108g2.3 comes from this
gene; cDNA EST yk108g2.5 comes from this gene~cDNA EST
yk166b9.3 come>
Length = 91
Score = 74.5 bits (180), Expect = 2e-13
Identities = 29/66 (43%), Positives = 42/66 (62%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ +E ++ C CG+ A++R +TGIW C KC +
Sbjct: 5 TKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVV 64
Query: 64 AGGAYL 69
AGGAY+
Sbjct: 65 AGGAYV 70
>sp|O17307|R37A_SCHMA 60S RIBOSOMAL PROTEIN L37A >gi|2565332|gb|AAB81969.1| (AF025539)
ribosomal protein smL37a [Schistosoma mansoni]
Length = 91
Score = 74.1 bits (179), Expect = 3e-13
Identities = 30/79 (37%), Positives = 47/79 (58%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ + +E K+ C CG+ +++R + GIW+CK C +
Sbjct: 4 TKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACKKVV 63
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY+ T A + +
Sbjct: 64 AGGAYVCSTTAATTIRAAI 82
>sp|O61462|R37A_CRYST 60S RIBOSOMAL PROTEIN L37A >gi|3098458|gb|AAC15655.1| (AF040712)
60S ribosomal protein L37A [Cryptochiton stelleri]
Length = 92
Score = 73.7 bits (178), Expect = 4e-13
Identities = 32/79 (40%), Positives = 46/79 (57%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ V +E K+ C CG+ A++R + GIW CK C +
Sbjct: 5 TKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRKVV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGA++ T A + V
Sbjct: 65 AGGAWVYSTMAAVTVRSAV 83
>gb|AAF52217.1| (AE003608) CG5827 gene product [Drosophila melanogaster]
Length = 92
Score = 72.2 bits (174), Expect = 1e-12
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ V +E K+ C CG+ +++R GIW CK+C
Sbjct: 5 TKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGA++ T A + V
Sbjct: 65 AGGAWVYSTTAAASVRSAV 83
>emb|CAB86710.1| (AL163505) 60S ribosomal protein L37a [Leishmania major]
Length = 92
Score = 72.2 bits (174), Expect = 1e-12
Identities = 33/79 (41%), Positives = 41/79 (51%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
T K+G GR+G RYG R+R +E KH C CG+ A RR + GIW+C C
Sbjct: 5 TVKMGVMGRYGTRYGANPRKRAKKLEVSQHAKHFCSFCGKFAFRRKAVGIWRCDGCSKTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY TP + V
Sbjct: 65 AGGAYTLSTPNNSTVRSTV 83
>gi|6322554 Ribosomal protein L43B; Rpl43bp [Saccharomyces cerevisiae]
>gi|6325300|ref|NP_015368.1| Ribosomal protein L43A;
Rpl43ap [Saccharomyces cerevisiae]
>gi|1346945|sp|P49631|RL43_YEAST 60S RIBOSOMAL PROTEIN
L43 (L37A) (YL35) >gi|1084777|pir||S54068 ribosomal
protein L37a.e, cytosolic - yeast (Saccharomyces
cerevisiae) >gi|805027|emb|CAA89164.1| (Z49219) unknown
[Saccharomyces cerevisiae] >gi|1314115|emb|CAA94991.1|
(Z71255) unknown [Saccharomyces cerevisiae]
>gi|1370300|emb|CAA97993.1| (Z73616) 10 kDa protein of
60S ribosomal subunit [Saccharomyces cerevisiae]
>gi|2131104|emb|CAA89623.1| (Z49594) ORF YJR094w-a
[Saccharomyces cerevisiae] >gi|2131105|emb|CAA89625.1|
(Z49595) ORF YJR094w-a [Saccharomyces cerevisiae]
Length = 92
Score = 71.4 bits (172), Expect = 2e-12
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +RR+V +E + ++ C CG++ V+R + GIW C C
Sbjct: 5 TKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY T A + +
Sbjct: 65 AGGAYTVSTAAAATVRSTI 83
>gb|AAF01526.1|AC009991_22 (AC009991) putative 60S ribosomal protein L37a [Arabidopsis
thaliana]
Length = 92
Score = 70.6 bits (170), Expect = 3e-12
Identities = 29/79 (36%), Positives = 44/79 (54%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKK G++G RYG +R+++ +E K+ C CG+ +V+R GIW CK CG +
Sbjct: 5 TKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVK 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGAY T + + +
Sbjct: 65 AGGAYTMNTASAVTVRSTI 83
>gi|4506643 ribosomal protein L37a [Homo sapiens]
>gi|6677785|ref|NP_033110.1| ribosomal protein L37a
[Mus musculus] >gi|11430428|ref|XP_002637.1| ribosomal
protein L37a [Homo sapiens]
>gi|132945|sp|P12751|R37A_HUMAN 60S RIBOSOMAL PROTEIN
L37A >gi|71373|pir||R5RT37 ribosomal protein L37a,
cytosolic [validated] - rat >gi|478320|pir||JN0875
ribosomal protein L37a - human >gi|631760|pir||S42109
ribosomal protein L37a, cytosolic - mouse
>gi|36134|emb|CAA47244.1| (X66699) ribosomal protein
L37a [Homo sapiens] >gi|57123|emb|CAA32232.1| (X14069)
ribosomal protein L37a (AA 1 - 92) [Rattus rattus]
>gi|292439|gb|AAA60280.1| (L06499) ribosomal protein
L37a [Homo sapiens] >gi|312414|emb|CAA51758.1| (X73331)
ribosomal protein L37a [Mus musculus]
Length = 92
Score = 67.9 bits (163), Expect = 2e-11
Identities = 29/79 (36%), Positives = 42/79 (52%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ V +E K+ C CG+ ++R + GIW C C
Sbjct: 5 TKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGA+ T + K +
Sbjct: 65 AGGAWTYNTTSAVTVKSAI 83
>sp|P32046|R37A_CHICK 60S RIBOSOMAL PROTEIN L37A >gi|283916|pir||S24170 ribosomal
protein L37a - chicken >gi|222866|dbj|BAA03209.1|
(D14167) ribosomal protein L37a [Gallus gallus]
Length = 92
Score = 67.9 bits (163), Expect = 2e-11
Identities = 29/79 (36%), Positives = 42/79 (52%)
Query: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
TKKVG G++G RYG +R+ V +E K+ C CG+ ++R + GIW C C
Sbjct: 5 TKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKTV 64
Query: 64 AGGAYLPVTPAGKVAKRVV 82
AGGA+ T + K +
Sbjct: 65 AGGAWTYNTTSAVTVKSAI 83
>dbj|BAA21635.1| (AB005904) ribosomal protein L37 [Schizosaccharomyces pombe]
Length = 85
Score = 66.3 bits (159), Expect = 6e-11
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 11 GRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQC--KKCGAIFAGGAY 68
G++G RYG +RR V +E + ++ CP CGR V+R + GIW+C K C AGGA+
Sbjct: 3 GKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAW 62
Query: 69 LPVTPAGKVAKRVV 82
T A A+ +
Sbjct: 63 TVTTAAATSARSTI 76
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.326 0.139 0.438
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29894128
Number of Sequences: 2977
Number of extensions: 920989
Number of successful extensions: 4461
Number of sequences better than 1.0e-10: 27
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4434
Number of HSP's gapped (non-prelim): 27
length of query: 83
length of database: 189,106,746
effective HSP length: 46
effective length of query: 37
effective length of database: 161,576,344
effective search space: 5978324728
effective search space used: 5978324728
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 158 (66.0 bits)