BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PABs5709 1122797 1123000 68 !not a gene! (68 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|11498216 A. fulgidus predicted coding region AF0608 [Archaeog... 93 4e-19 >gi|11498216 A. fulgidus predicted coding region AF0608 [Archaeoglobus fulgidus] >gi|7451320|pir||H69325 hypothetical protein AF0608 - Archaeoglobus fulgidus >gi|2650024|gb|AAB90641.1| (AE001063) A. fulgidus predicted coding region AF0608 [Archaeoglobus fulgidus] Length = 71 Score = 92.8 bits (227), Expect = 4e-19 Identities = 45/60 (75%), Positives = 53/60 (88%) Query: 6 VVSFRIPRKLKKKMKDVVINWSEEIRKFIEAKVREYKKKKALEEIDMMLANLPKTEKGTA 65 +VSFRIP +LKK+MK++ INWSEEIRKFIEAK REY+KKKALEEI+ ML+NL EKGTA Sbjct: 1 MVSFRIPPELKKRMKEIDINWSEEIRKFIEAKSREYRKKKALEEINAMLSNLSGAEKGTA 60 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.317 0.131 0.353 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22286851 Number of Sequences: 2977 Number of extensions: 688651 Number of successful extensions: 3893 Number of sequences better than 1.0e-10: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3892 Number of HSP's gapped (non-prelim): 1 length of query: 68 length of database: 189,106,746 effective HSP length: 47 effective length of query: 21 effective length of database: 160,977,857 effective search space: 3380534997 effective search space used: 3380534997 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 156 (65.2 bits)