BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PABs6737 1481237 1481443 69 !not a gene!
         (69 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H72586 hypothetical protein APE1165 - Aeropyrum pernix (str...    67  2e-11

>pir||H72586 hypothetical protein APE1165 - Aeropyrum pernix (strain K1)
          >gi|5104836|dbj|BAA80150.1| (AP000061) 128aa long
          hypothetical protein [Aeropyrum pernix]
          Length = 128
          
 Score = 67.1 bits (161), Expect = 2e-11
 Identities = 32/49 (65%), Positives = 37/49 (75%)

Query: 19 PVTSTTCIRAEAILRSSRNLFPNPLPSWAPGTRPATSIILTGISARPSL 67
          P+ STT  RA A L SSRNL P+PLP WAPGTRPATS  LTG++  PS+
Sbjct: 3  PLASTTRRRASAFLTSSRNLLPSPLPLWAPGTRPATSRSLTGMNLHPSM 51


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.130    0.414 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26344722
Number of Sequences: 2977
Number of extensions: 815866
Number of successful extensions: 2114
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2113
Number of HSP's gapped (non-prelim): 1
length of query: 69
length of database: 189,106,746
effective HSP length: 48
effective length of query: 21
effective length of database: 160,379,370
effective search space: 3367966770
effective search space used: 3367966770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 156 (65.2 bits)