BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PABs9645 1161375 1161178 -66 !not a gene!
         (66 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||B72562 hypothetical protein APE1780 - Aeropyrum pernix (str...    69  5e-12

>pir||B72562 hypothetical protein APE1780 - Aeropyrum pernix (strain K1)
           >gi|5105470|dbj|BAA80783.1| (AP000062) 255aa long
           hypothetical protein [Aeropyrum pernix]
           Length = 255
           
 Score = 69.1 bits (166), Expect = 5e-12
 Identities = 37/55 (67%), Positives = 40/55 (72%)

Query: 1   MGFLANASGVASSSGLYLFHSPSLPLNVGTPLSALIPAPVNAIAFFEEAKTLATS 55
           +G L NASGVA S G  L H+PSLPL VG PLSALIPAPVNA A  E A+ LA S
Sbjct: 150 LGSLLNASGVARSRGSNLLHNPSLPLKVGIPLSALIPAPVNATANLELARILADS 204


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.315    0.132    0.364 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22876966
Number of Sequences: 2977
Number of extensions: 771361
Number of successful extensions: 1253
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1252
Number of HSP's gapped (non-prelim): 1
length of query: 66
length of database: 189,106,746
effective HSP length: 45
effective length of query: 21
effective length of database: 162,174,831
effective search space: 3405671451
effective search space used: 3405671451
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (22.0 bits)
S2: 156 (65.2 bits)