Similarity searches are performed with RPS-BLAST (BLAST 2.2.x NCBI, Altschul et al., 1997, Nucleic Acids Res. 25:3389-3402) Submit your sequence and select the CDD DataBase you want to match.
>r_klactV4633 Similar to YOL081w SP|P19158 IRA2 GTPase-activating protein for RAS proteins {P2.138.f2.1} MSEAHNVLTDVTAFLLSQLDPLLPVNSHVKTFEEVERDPYFTNIRLSLFNLVVSHGYSAISPAIVAKLEQIANLSKDKNQ DFDILLTLVVLLRMFTDTSEIYWRNLDPEYKLNYSLSDDSAFSRFYNGYSVQMASLHTIRPKPLSPQIANSFLQLLSRIK SNKRVIKMLNSMLKSLHGGSSSSLYPSQGKDNSNSDAKKSKYYTYLVDVLDQHCAYLFKYIAASNPHEFHSFIRSVIITP LLVAHTHTESEIAPYLCYFSFHYITSETLPSFLDVLQRMVVRMKKSIHQEILLYFASESIQSWIMARPHDYLRVIEGLQK NSSDPALQNIQKISTSLFEDVFSSFNIERILTEGAISSATSPTVISPQELSSHLDPFEEYAIYDEESSSGHSRTASTSSG RSGYNAPYYGPQFELNDDTEDMTRVSVLTFATLMLMLSPDIFEEINNTSLKNIPDDALGTDEDTDAFDDKSSSDSPFLSR SSSSTLKSSRSSKFGLKKIRNQLTSLNHVTNKKTKFLLTILKNINGNNIISEYSILDTLRVLILISKLSTSPLLREADSS VSYFTRRLFFLMCDLLQLGSEKDAKRNPMVAHCLAKFPQSHFKLQVDYFYVACSLDADAFLEKLSDFIKRKHSGISHIRM ITDGFCIYFNNATMHNTKDRIMTRIDDFLKDTACEMANILLSESNLFDEHASEVVDSIFELKPGDYSKGYQKIQFNASPL PSSSPAFMNFFSRTGDSTPTSKSTSTTSSSSLSPVEGVSAAIAGKNLRDIVAPTARRPSKSSFASLRETSSPNEGEKSTN TIRTIIDKNIKSPLRVGSMLRKTSQESISSATVKNIRDTLERHEQETTQSARIILINIFSIYKGMTRYYYMTYDEDSDTT VYLRDFNRTIKPVFASLVDDNESLFDTARGIISSVITQLKEPQVDITAFRSVCYVGSAYLLSLMGTTLFDLNLSDLKREQ LLKPLVDLWTARIGIAKTYEMNDSLSDLLEEEALTFHLIRGSVGRALFCSLYSNNTAIHKLLKTAFKLFTEEIRIHQLLH EDDVDDIDDDHELDFANVEFFQVMCRDNYVSTGVVAFQRRLRTDILKYIKFPDKIVFDVSHLIYKRWYDASLKPSLSTSE TSHFRNYAGFLAASCGIFSTINDSTQHHFPLLHEMKKSVEAKVSYFVGKQCSWLNNEDLLTRENSKDILATELHPLAFDA LFAALRQRIDELKDINIVEKDNELSFILLEQVIMVVRMILERDDTSEVLIIVSLPLLNLIDDILRIVDTIDKSSPKYFKC VIHLSKMLKSFQHSESSICIAGYMVVKNRWLRLVTQWFQSAIFKEFDLLNLSKSHRDMDLEKRDMDYLYIDTTIESSKAI AYLTKDLVLEAPQSMSEIELQRSKSVVFGNYFNILLKALEKSTNVENFPSTLRHKIASLNENIIISLTNLLIANVDVGLN HATPIGYSNNRNIRLAFMNVFVNIVSSFDISNNRTKRKRDEIVEEVVLMTLKRPTLLSKACRICPASDIDALASSIVYFF DVKNAAHIIVTELVREEIGNATRHMEILRRNSCATRALSMLARLKGMDYLSNILKPILEELINSKECFDVEKLDPNDVDA PRNLMLFKKYMTKVVDAITGSVDSFPPQFFVICQAIHSSASERFPEYADIAVGSFLFLRFFCPALVSPDSEEIVDSLTPK ARKSSMSLAKVIQNIANGSVNSIKWKILESESEFLKNCSNKIFEFLSVVSDKNRKVKINLRMQNRVLPNEFSFLHKFLYY HGLEMRNALIEDIKSFDDLATVRETAEAVDELLSLMGQPRMEFKNEIPAYIREHSETSSELYEFMIKQAVKCPETPENEC KFVQESVTSEGLPVVIFNWCEYQKDGNDDVETLIYLIFQIYSKVMTKKHFFVTDCTGFDGVRQPKNRFVKLSSLFFNLIP AEGLANCETFYFFNPTPIYLEWWTEFQNSHANIFQNMNVSMSFLNTDSDPKLIKALGLSDYSKEVYHDVRVTLHDVSLYD EAKRQFSPVTLKVGNKYFQIVHDSAWTLKASDASDTIVINPNDVYEIAEVASTSVSRITGVSSEFCFELRNRKRLIMSSP KYLEILKMFYYSQAKILEEFNDNEYSDISSRHSKEAIKTADIVSHLLLVALVGLGGDDEIRVVSYNLLSSMHTTFSLNMG HLLPKTPDIYISEDPNPIFEPLIKTLAETSPELTSYYLKYSIDLLENGEHDLHFIANLLRTMRYWAKNLSKHVFLADDQK GPEIATKLVRRLVKLTVQQNQPTSLYLDYIWPVLVHDSCLLKEVIEEVVGHCMDRAAEGVDWHPACKILLRAPTIDITGV IIKRVIDITHSFLPNLKEETNVNSWTELIILVHLCSSLFCDSPLLVDIYMPEVLYIVSLLIDVGSTEMRLSLHKLLMNAC QSLLSNASLPKYNRRNLYEIQKIFSDQKMKIMFGFSQERGRVLQNFSASSFLTKFTTLEHFVNNLMSLMDNGSLINVEQW KTRYMQYIMGTVFHVQSFLSARAMMILGIVSKEGISDGLLLNLLRQSMVIVAMPDVNDEQIFFVISTFFTYTKAVIGVDP QSPLLPKLFWLASSISFSINMMIYQSGLLFMSSTAQHLSLGSMEKMDRGEIPEPLIKQLMAQRNFGENILRQVEAMGDLR VTESNFSHVMISLICKGLLIPYTRATSLSSLVVFFKLFYFELMFGPNEDYLIFMFFIFILQRPSAFLKCMEDVDMDTDVV QLDDRNKIHKSLLDWLVKFSPDACLTMYKASLYFSCKATDEQGKVRFMLVYRHLMQHNLKAAFKLYPFVLNELRRLSKYS NNSSTVLLSFEIIKMAVKSKEYLKLPMIEKEMYKKLEERGLTGIKSIPFENELANDVLTGVRENPIITYERKKLAVMLLS KVISSASER
Display full alignements in /Graphics Before submission you must select at least one Conserved Domain DataBase . Pairwise Master-slave with identities Master-slave no identities Flat master-slave Flat master-slave, no identities Master-slave no identities & blunt ends Flat master-slave, no identities & blunt ends Output Alignment: (options not available with blastx and tblastx)
Expect value (E)
[Real]
Query sequence type
Protein Nucleic
Filter query sequence (DUST with blastn, SEG with others)
True False
X dropoff value for gapped alignment (in bits)
[Integer]
Number of one-line descriptions (V)
Number of alignments to show (B)
DataBase administrator