| Clone | Coding Genes |
Genes with COG |
Number of COG Categories | Number of COG funtions |
COG functional categories | COG functions |
|---|---|---|---|---|---|---|
| LUAcid_AD106_G4 | 35 | 28 | 10 | 27 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism H Coenzyme transport and metabolism I Lipid transport and metabolism J Translation, ribosomal structure and biogenesis K Transcription L Replication, recombination and repair R General function prediction only S Function unknown | COG0247 Fe-S oxidoreductase COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG1757 Na+/H+ antiporter COG0405 Gamma-glutamyltransferase COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III COG0024 Methionine aminopeptidase COG0162 Tyrosyl-tRNA synthetase COG0621 2-methylthioadenine synthetase COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) COG0454 Histone acetyltransferase HPA2 and related acetyltransferases COG0632 Holliday junction resolvasome, DNA-binding subunit COG0817 Holliday junction resolvasome, endonuclease subunit COG2255 Holliday junction resolvasome, helicase subunit COG2801 Transposase and inactivated derivatives COG0612 Predicted Zn-dependent peptidases COG0820 Predicted Fe-S-cluster redox enzyme COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG0217 Uncharacterized conserved protein |
| LUAcid_AD248_D7 | 26 | 22 | 8 | 21 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism G Carbohydrate transport and metabolism J Translation, ribosomal structure and biogenesis K Transcription R General function prediction only S Function unknown | COG0247 Fe-S oxidoreductase COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG1413 FOG: HEAT repeat COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG4993 Glucose dehydrogenase COG0024 Methionine aminopeptidase COG0162 Tyrosyl-tRNA synthetase COG0454 Histone acetyltransferase HPA2 and related acetyltransferases COG0612 Predicted Zn-dependent peptidases COG0820 Predicted Fe-S-cluster redox enzyme COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG1262 Uncharacterized conserved protein |
| LUAcid_AD370_D1 | 31 | 24 | 12 | 24 | C Energy production and conversion E Amino acid transport and metabolism G Carbohydrate transport and metabolism H Coenzyme transport and metabolism I Lipid transport and metabolism J Translation, ribosomal structure and biogenesis L Replication, recombination and repair M Cell wall/membrane/envelope biogenesis P Inorganic ion transport and metabolism R General function prediction only S Function unknown V Defense mechanisms | COG0554 Glycerol kinase COG2421 Predicted acetamidase/formamidase COG0002 Acetylglutamate semialdehyde dehydrogenase COG0405 Gamma-glutamyltransferase COG0548 Acetylglutamate kinase COG2303 Choline dehydrogenase and related flavoproteins COG0477 Permeases of the major facilitator superfamily COG0001 Glutamate-1-semialdehyde aminotransferase COG0416 Fatty acid/phospholipid biosynthesis enzyme COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) COG0441 Threonyl-tRNA synthetase COG0629 Single-stranded DNA-binding protein COG1533 DNA repair photolyase COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase COG1091 dTDP-4-dehydrorhamnose reductase COG0725 ABC-type molybdate transport system, periplasmic component COG0456 Acetyltransferases COG1399 Predicted metal-binding, possibly nucleic acid-binding protein COG2041 Sulfite oxidase and related enzymes COG2945 Predicted hydrolase of the alpha/beta superfamily COG4146 Predicted symporter COG1359 Uncharacterized conserved protein COG2331 Uncharacterized protein conserved in bacteria COG0577 ABC-type antimicrobial peptide transport system, permease component |
| LUAcid_KM3_A5 | 25 | 21 | 6 | 18 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism G Carbohydrate transport and metabolism J Translation, ribosomal structure and biogenesis R General function prediction only | COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG1757 Na+/H+ antiporter COG0405 Gamma-glutamyltransferase COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG0477 Permeases of the major facilitator superfamily COG0162 Tyrosyl-tRNA synthetase COG0251 Putative translation initiation inhibitor, yjgF family COG0621 2-methylthioadenine synthetase COG0612 Predicted Zn-dependent peptidases COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase |
| LUAcid_KM3_B4 | 22 | 11 | 8 | 11 | E Amino acid transport and metabolism G Carbohydrate transport and metabolism H Coenzyme transport and metabolism J Translation, ribosomal structure and biogenesis M Cell wall/membrane/envelope biogenesis Q Secondary metabolites biosynthesis, transport and catabolism R General function prediction only S Function unknown | COG2303 Choline dehydrogenase and related flavoproteins COG2133 Glucose/sorbosone dehydrogenases COG4833 Predicted glycosyl hydrolase COG4993 Glucose dehydrogenase COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C COG0162 Tyrosyl-tRNA synthetase COG1696 Predicted membrane protein involved in D-alanine export COG1228 Imidazolonepropionase and related amidohydrolases COG1881 Phospholipid-binding protein COG2391 Predicted transporter component COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain |
| LUAcid_KM3_B8D2 | 36 | 29 | 10 | 28 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism G Carbohydrate transport and metabolism J Translation, ribosomal structure and biogenesis K Transcription L Replication, recombination and repair M Cell wall/membrane/envelope biogenesis R General function prediction only S Function unknown | COG0247 Fe-S oxidoreductase COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG1413 FOG: HEAT repeat COG1757 Na+/H+ antiporter COG0405 Gamma-glutamyltransferase COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG4993 Glucose dehydrogenase COG0024 Methionine aminopeptidase COG0162 Tyrosyl-tRNA synthetase COG0621 2-methylthioadenine synthetase COG0454 Histone acetyltransferase HPA2 and related acetyltransferases COG0632 Holliday junction resolvasome, DNA-binding subunit COG0817 Holliday junction resolvasome, endonuclease subunit COG2255 Holliday junction resolvasome, helicase subunit COG3468 Type V secretory pathway, adhesin AidA COG0612 Predicted Zn-dependent peptidases COG0820 Predicted Fe-S-cluster redox enzyme COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG0217 Uncharacterized conserved protein COG1262 Uncharacterized conserved protein |
| LUAcid_KM3_D9 | 30 | 21 | 7 | 20 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism H Coenzyme transport and metabolism J Translation, ribosomal structure and biogenesis R General function prediction only S Function unknown | COG0247 Fe-S oxidoreductase COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG1757 Na+/H+ antiporter COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis COG0162 Tyrosyl-tRNA synthetase COG0251 Putative translation initiation inhibitor, yjgF family COG0621 2-methylthioadenine synthetase COG0612 Predicted Zn-dependent peptidases COG0820 Predicted Fe-S-cluster redox enzyme COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG3391 Uncharacterized conserved protein |
| LUAcid_KM3_F8 | 27 | 14 | 7 | 14 | C Energy production and conversion E Amino acid transport and metabolism G Carbohydrate transport and metabolism H Coenzyme transport and metabolism I Lipid transport and metabolism M Cell wall/membrane/envelope biogenesis R General function prediction only | COG1625 Fe-S oxidoreductase, related to NifB/MoaA family COG0260 Leucyl aminopeptidase COG0591 Na+/proline symporter COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily COG1109 Phosphomannomutase COG0001 Glutamate-1-semialdehyde aminotransferase COG0113 Delta-aminolevulinic acid dehydratase COG0294 Dihydropteroate synthase and related enzymes COG0558 Phosphatidylglycerophosphate synthase COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily COG0457 FOG: TPR repeat COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) COG2936 Predicted acyl esterases |
| LUAcid_KM3_G1 | 24 | 17 | 6 | 16 | C Energy production and conversion E Amino acid transport and metabolism F Nucleotide transport and metabolism J Translation, ribosomal structure and biogenesis R General function prediction only S Function unknown | COG0247 Fe-S oxidoreductase COG0277 FAD/FMN-containing dehydrogenases COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases COG0405 Gamma-glutamyltransferase COG2755 Lysophospholipase L1 and related esterases COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG0162 Tyrosyl-tRNA synthetase COG0251 Putative translation initiation inhibitor, yjgF family COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III COG1262 Uncharacterized conserved protein |
| LUAcid_KM4_H7 | 33 | 27 | 10 | 27 | F Nucleotide transport and metabolism H Coenzyme transport and metabolism I Lipid transport and metabolism J Translation, ribosomal structure and biogenesis K Transcription L Replication, recombination and repair O Posttranslational modification, protein turnover, chaperones P Inorganic ion transport and metabolism R General function prediction only S Function unknown | COG0015 Adenylosuccinate lyase COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain COG0150 Phosphoribosylaminoimidazole (AIR) synthetase COG0151 Phosphoribosylamine-glycine ligase COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases COG1182 Acyl carrier protein phosphodiesterase COG0162 Tyrosyl-tRNA synthetase COG0621 2-methylthioadenine synthetase COG0583 Transcriptional regulator COG3145 Alkylated DNA repair protein COG0555 ABC-type sulfate transport system, permease component COG1495 Disulfide bond formation protein DsbB COG0038 Chloride channel protein EriC COG1118 ABC-type sulfate/molybdate transport systems, ATPase component COG1613 ABC-type sulfate transport system, periplasmic component COG4208 ABC-type sulfate transport system, permease component COG0431 Predicted flavoprotein COG0612 Predicted Zn-dependent peptidases COG0820 Predicted Fe-S-cluster redox enzyme COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I COG1408 Predicted phosphohydrolases COG3826 Uncharacterized protein conserved in bacteria |