Sulfolobus solfataricus P2 complete genome sequencing project

Homed at LBMGE Orsay, France

 

Transcription and regulation

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Gene #   Gene Name Description                                                                EC number Coding type   Optional coding type
SSO0034  soj       SOJ protein                                                                          Regulation    
SSO0103  cinA      Competence damage protein                                                            Regulation    
SSO0356            Phosphate regulatory protein, putative                                               Regulation    
SSO0581            GTP binding protein, hypothetical                                                    Regulation    
SSO0669            Iron-dependent repressor                                                             Regulation    
SSO0939            Pre mRNA splicing protein                                                            Regulation    RNA modification
SSO1859  htpX-1    Heat shock protein                                                                   Regulation    
SSO2694  htpX-like Heat shock protein X, protease htpX homolog, putative                                Regulation    Chaperones
SSO3136            Regulatory protein, putative                                                         Regulation    
SSO3182            Serine/threonine protein kinase, putative                                            Regulation    
SSO3207            Ser/thr protein kinase, putative                                           2.7.1.-   Regulation    
SSO3231  htpX-2    Heat shock protein                                                                   Regulation    
SSO0016            Transcription regulator (exsB) related protein                                       Transcription RNA polymerase and transcription factors
SSO0048            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO0071  rpoD      DNA-directed RNA polymerase, subunit D                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0157            Transcriptional regulator                                                            Transcription RNA polymerase and transcription factors
SSO0220  nusA      Transcription termination factor nusA homolog, putative                              Transcription RNA polymerase and transcription factors
SSO0223  rpoA2     DNA-directed RNA polymerase, subunit A''                                   2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0225  rpoA1     DNA-directed RNA polymerase, subunit A'                                    2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0227  rpoB1     DNA-directed RNA polymerase, subunit B'                                    2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0266  tfE       Transcription Factor E (TFE), TFIIE alpha subunit homolog                            Transcription RNA polymerase and transcription factors
SSO0270  MBP-like  Multiprotein Bridging Factor (MBP-like), putative                                    Transcription 
SSO0277  rpoG      DNA-directed RNA polymerase, subunit G                                     2.7.7.6   Transcription 
SSO0291  rpoM-1    DNA-directed RNA polymerase, subunit M                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0347  nusG      Transcription termination antitermination factor                                     Transcription RNA polymerase and transcription factors
SSO0386            mRNA 3'-end processing factor, putative                                              Transcription RNA modification
SSO0415  rpoE1     DNA-directed RNA polymerase, subunit E'                                    2.7.7.6   Transcription RNA polymerase and transcription factors
SSO0446  TFB-1     Transcription initiation factor IIB (TFIIB) homolog                                  Transcription RNA polymerase and transcription factors
SSO0458            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO0606            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO0751  rpoF      DNA-directed RNA polymerase, subunit F                                     2.7.7.6   Transcription 
SSO0761            mRNA 3'-end processing factor, putative                                              Transcription RNA modification
SSO0940            Fibrillarin-like pre-rRNA processing protein                                         Transcription 
SSO0943            N2,N2 dimethylguanosine tRNA methyltransferase                             2.1.1.32  Transcription RNA modification
SSO0946  TFB-2     Transcription initiation factor IIB (TFIIB) homolog                                  Transcription RNA polymerase and transcription factors
SSO0951  tfIID     TATA box binding protein, hypothetical                                               Transcription RNA polymerase and transcription factors
SSO10340           Transcription regulator, putative                                                    Transcription RNA polymerase and transcription factors
SSO1039            tRNA nucleotidyltransferase                                                2.7.7.25  Transcription RNA modification
SSO1082            Transcriptional regulator, marR family, putative                                     Transcription RNA polymerase and transcription factors
SSO1101            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO1108            Transcriptional regulator Lrs14                                                      Transcription RNA polymerase and transcription factors
SSO1110            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO11412           Copper binding protein                                                               Transcription RNA polymerase and transcription factors
SSO1255            Transcriptional regulator                                                            Transcription RNA polymerase and transcription factors
SSO1352            Transcriptional regulator, marR family, putative                                     Transcription RNA polymerase and transcription factors
SSO1588            Transcription regulator                                                              Transcription 
SSO2131            Transcriptional regulator homolog (Lrp/AsnC family)                                  Transcription RNA polymerase and transcription factors
SSO2206  tenA-1    Transcriptional activator                                                            Transcription RNA polymerase and transcription factors
SSO2347  asnC      Transcriptional regulatory protein, AsnC family                                      Transcription RNA polymerase and transcription factors
SSO2446  rtcA      RNA 3' terminal phosphate cyclase (RNA 3' phosphate cyclase) (RNA cyclase) 6.5.1.4   Transcription RNA modification
SSO2450            TATA binding protein (TBP)-interacting protein (TIP49-like), putative                Transcription 
SSO2474            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO2478            Transcriptional regulatory protein, Sir2 protein homolog                             Transcription RNA polymerase and transcription factors
SSO2506            Transcriptional regulator, putative                                                  Transcription RNA polymerase and transcription factors
SSO2598  tenA-2    Transcriptional activator                                                            Transcription RNA polymerase and transcription factors
SSO2652            Transcriptional regulatory protein (Lrp/AsnC family)                                 Transcription RNA polymerase and transcription factors
SSO2688  merR      Mercury resistance operon repressor, probable                                        Transcription RNA polymerase and transcription factors
SSO3155  wrbA      Tryptophan repressor binding protein                                                 Transcription 
SSO3254  rpoB2     DNA-directed RNA polymerase, subunit B''                                   2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5140  rpoN      DNA-directed RNA polymerase, subunit N                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5410  snRNP-1   Small nuclear riboprotein protein                                                    Transcription RNA modification
SSO5468  rpoH      DNA-directed RNA polymerase, subunit H                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5522            Regulatory protein, AsnC family, putative                                            Transcription RNA polymerase and transcription factors
SSO5576  rpoM-like DNA-directed RNA polymerase, putative subunit M                            2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5577  rpoL      DNA-directed RNA polymerase, subunit L                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5798  rpoE2     DNA-directed RNA polymerase, subunit E''                                   2.7.7.6   Transcription RNA polymerase and transcription factors
SSO5865  rpoP      DNA-directed RNA polymerase, subunit P                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO6454  snRNP-2   Small nuclear riboprotein protein                                                    Transcription RNA modification
SSO6768  rpoK      DNA-directed RNA polymerase subunit K                                      2.7.7.6   Transcription RNA polymerase and transcription factors
SSO9221  rpoM-2    DNA-directed RNA polymerase, subunit M                                     2.7.7.6   Transcription RNA polymerase and transcription factors
SSO9953            Transcription regulator, putative                                                    Transcription RNA polymerase and transcription factors