International Summer School

   From Genome to Life:

    Structural, Functional and Evolutionary approaches

 


 GASCUEL Olivier

LIRMM, 161 rue Ada,, 34392 - Montpellier, France

title: Phylogeny reconstruction methods: basic principles and comparisons 

  • Biological and mathematical fundaments of molecular phylogenies 
  • Parsimony methods
  • Stochastic models of sequence evolution 
  • Distance based methods 
  • Maximum-likelihood approaches
  • Theoretical results: long branch attraction, statistical consistency, time complexity 
  • Simulation results
  • Discussion

ADDITIONAL DATA



HTTP LINKs:

- "Transparencies" :

http://www.lirmm.fr/w3ifa/MAAS/GascuelCargese.pdf

-"Reconstructing the duplication history of tandemly repeated genes" :

http://www.molbiolevol.org/cgi/content/abstract/19/3/278