LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1349 Beta galactosidase, putative (EC 3.2.1.23) MVIVEVSYSSKFYTIDGEELPIYGGTLQFFRVPRNAWKDRLEKMKRHGLNAVDTYVAWNWHEPQEGSFDFTGETHPQRDL VGFLELAEDMGFYVLIRPGPYICGEWRNGGIPQWLIDKHPEILAKGPNGSLPNDIYYPPITYLHPIYLEYVMKWYEAVFP IIREHLYTNGGSIITVTIDDEPSYWETIFQPFLTDYNEPITREGGLWHKWLEMNYSIDELGERYGVDISDYGDIKPPSDF SEPLTKILDWHHFKIWMINEYVRRLYEKMKDYVDVPITLLDPYLLLAAWRYFYEYVKENNLNIHLWTEFWYSFYRSFDFK EDKLGHLYYKIGLYRYYIGKMGTPPLSIETQSSLANVIEVDEAELLYSLLPALGIHNVNYYLYVGGENPRGYESHNGVTW DVYSPIGLDGRERQHVEAIKWIGKFLRSNKDFGKSEVKFKVAFGVYEPYEPLALWGYRPENFKESVNLNEYLLGERGLLT LLAMSNVPFDVVDLETSSLEELLEYEQLWVYSLDFMASDVQRKLVEYVKEGGSLVIMPMLPYLDENMRECRILEEELGVK VSDEVARDNFRLIPYVSVDSDGIDRMLVRNVVREVKGGEPIAWVGDKVVASLVRKGKGSAIILGFRLQYYSSYHDMHRKF VDKILKLQGIERDFEVTDRDILVIPRKDYLVLINPRGHRVLGKVKYDDLEMPRLLEGIEMKTRGSLFLPLRKKIGEYELL YSTATLLRVEGNELTFRNHLSNRSEVALKGVDSIEVRGGKVEKFASEGDAKVFVIGHEGKEFTVVLR

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521734 Gene name: - COG: G COG1874 Beta-galactosidase Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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