Pyrococcus abyssi
>PAB1457 Intein containing bacterial type II secretion system protein E
MSEEKKKVRSWIDEILSGDNLTLEAILKKSESERKEEKKEETPLPKTESLSLASILAGVQKKEETEKETETLPFAVLEKT
GGAPRLEDILKRSRPQERKEEGVGIQGILVPSSKYAGQVVRVLDVYGNVRIVRVKGEAVPIYEISVPELSREEEKLLKLV
RDRAIVEIQIDPESIPNLEERRKVFLREVRKMVKEMAPTLSEGRVELLSELIVQNMIGYGKLDPLVRDDNLEEIMVIGID
RPVYVWHRRFGMCKTNIVFKTERELLTIIERIAREVGRRIDQQNPLLDARLPDGSRVNATLPPISLDGPTLTIRKFKKDP
LTIIDLIKFRTLSSDVAAFLWLLVDGLGVKPANILVAGGTGSGKTTTLNSLAMFIPPSERVISIEDTAELQLPIEHWVRL
ETRPPNVEGKGEITMDDLVKNTLRMRPDRIIVGEVRGPEARTMFTAMNTGHDGALYYFSEIQLPNGKEFIGKLVDELFEK
YHDKIGKYKDMEYVELNEEDTFEVISIGPDLSARRHKVTHVWRRKVKDGEKLVKIRTASGKELVLTQDHPVFVLLGRDVA
RRDAGNVKVGDEIAVLNTRPDFSVLSPPAMPELLSEPFNYELSSIGDVAWDEVVEVDEIDAKGLGVEYLYDLTVDINHNY
VANGIVVSNCMGTIHSNSARETIIRLESPPMNVPKIMIPALDIIIMQVRYHTRKKGTIRRVTEIAEVSGIEGESIQLNFL
YKYDPAKDELVRTEVPSRFLQILSYHTGMSLEEIHLEIEKRKLVLDWMIEKGLRRIDEVGAQIREFYIDEEEFFKKIQRE
AATMEISRRVKEFI



Supplementary options

Additional orf sequence data

See Genomic Environment

Search GenBank with PSI-Blast at NCBI

Search Complete Genomes DataBase with Blast at LBMGE

Search InterPro Database at LBMGE

Search CDD Database at LBMGE

Determine COG functional Category (microbial)

Determine COG functional Category (eukarial)

See this orf in P. abyssi Data Base

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GenBank id: 14521589                                                                                                                                   
Gene name:  -                                                                                                                                                                                                               
COG:        NU COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis L COG1372 Intein/homing endonuclease U COG4962 Flp pilus assembly protein, ATPase CpaF  
Taxon:      272844                                                                                                                 
Lineage:    Archaea:                                                                                                                                                                                                        
            Euryarchaeota:                                                                                                                                                                                                  
            Thermococci:                                                                                                                                                                                                    
            Thermococcales:                                                                                                                                                                                                 
            Thermococcaceae:                                                                                                                                                                                                
            Pyrococcus:                                                                                                                                                                                                     
            Pyrococcus abyssi:                                                                                                                                                                                              
            Pyrococcus abyssi GE5                                                                                                                                                                                           

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