LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1970 pyridoxal-phosphate dependent enzyme MLFYQCREVPSMKVVLPDGRIPRRWYNILPDLPEPLDPPLDPETEEPIDIEKLKRIFAEELVKQEISRERYIEIPGELRK LYSKIGRPTPLFRATNLEKLLGTPARIYFKYEGATVTGSHKINTALAQAYYAKKQGIERLVTETGAGQWGTALSLAGALL GLKVRVYMARASYQQKPYRKTLMRIYGAEVFPSPSENTEVGKRFLKEDPNHPGSLGIAISEAIEDVLKDEKARYSLGSVL NHVLMHQTVIGLEAKEQMEEFEEPDVIIGCVGGGSNFAGLAYPFVKDVLDGKSEYEFIAVEPKAAPTMTRGVYTYDYGDS AGLTPKLKMHTLGHRYYVPPIHAGGLRYHGLAPTLSVLINHGIVKPIAYHQTEVFEAAVLFAKAEGIVPAPESAHAVKAV IDKALEARREGKEMVILFNLSGHGLLDLKGYEDYLDGKLEDYEPRDLPVKS

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14520795 Gene name: trpB-2 COG: R COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
^__________