LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB2414 Alpha-glucan phosphorylase MKVDNSVKERILRRLPENISKLADLAYNYWWSWDTKAMKLWQRIDEEHWREYKNPVKLLLEVPESRLRQLSRDDSFLDLY ELVIERFENYMRATTTWMTMNYPRWDKPIVYLCMEYGIGKSLPIYSGGLGILAGDHLKTASDLGLPLIAIGLLYKHGYFK QEIDRDGRQIEKFPEYNIREMPIRQVLNNDGTPLLIDVPIEDRIVKARVFLVEVGRVKLYLLDTDVPENREDDRRICDYL YNAEPDKRIKQEILIGIGGMRLLKALEIEPGVIHLNEGHPSFANFERIRWFMEKGLTFEEALELVRATSVFTTHTPVPAG HDVFPVDFVREKLRLFLRDLPQDKFLGLGKVTPEDTNFNMTVLSIRTSEFVNAVSKLHAKVTREMWSNLWPGVPTDEIPI DAITNGVHTPTWVNENLAKLYDIYIGKIWREHVNLEGIWYAIERIPDSELWEAHLKAKREVIELIRRKIMKRNERLGIDE PLPDIDENALIIGFARRFATYKRAILLFTDLERLKRIVNNPERPVYIIFGGKAHPMDEAGKEFLRRVYEVSQMPEFKGKI ILIENYDMGSARILVSGVDVWLNTPRRPLEASGTSGMKAGLNGVINLSVFDGWWVEGYNGRNGWVIGDATLEPETEADDY LDAMSLYDLLENVVVPLYYENRSAWIRMMKESIMSIAPRFSTYRMVKEYISKFYSRAMETGVYLSRDNFKWAKELAKWKE KIRREWGEVEIEDAKVSEDSIEVTLRLGNLRPEDVRVELYYGVKGDGKIAEPSTVELRKMKELGDGRYVYSYSGKALKYI NHDCWHYSVRVYAYHSMIPGKFLLGGYIKWKVLKN

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14520864 Gene name: agpa COG: G COG0058 Glucan phosphorylase Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
^__________