LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO0220 transcription elongation factor NusA MTRANVRDCIIDNENNRIIFLVDSKDMGVAIGKSGINVKKLKKIIGKDIELVAYSDNLEELVKNLMSPARVRSVKVVNTS SKKSVYINIDPQDKGLAIGKNGRNVARAKLILKRYMDIDNVVIV

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897168 Gene name: nusA COG: K COG0195 Transcription elongation factor Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO0220
hypothetical
1
nusA
Transcription termination factor nusA homolog, putative
Transcription
1
single function



RNA polymerase and transcription factors
04/22/01 00:00:00
terminal
status:good K COG0195 Transcription Transcription terminator NusA

CROSS REFERENCES:
pI: 10,61
MW: 13812,13
GenBank: 13813357
SCOP superfamily: => 
SCOP assignment: 18-62 3.8e-03 KH-domain