LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO0439 tRNA splicing endonuclease MVKALLVGSKVLVPSIDESRYLYSNGFYGKPIGISKPKGPKDIVRPLELSLIESVYLTKKGLINVVDKNGDLLEYKKLYE YSAMKINKFEILYKVYEDLREKGFIVRSGVKYGADFAVYTLGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTKKRL VLALVDRKSEGIRYIMFKWVKM

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897369 Gene name: - COG: J COG1676 tRNA splicing endonuclease Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO0439
hypothetical
1

tRNA  intron endonuclease, putative
Translation
16
single function
3.1.27.9

M.jannaschii homolog
Translation factors
04/22/01 00:00:00
terminal
status:good J COG1676 Translation, ribosomal structure and biogenesis tRNA splicing endonuclease

CROSS REFERENCES:
pI: 10,18
MW: 20710,21
GenBank: 13813592
SCOP superfamily: => 
SCOP assignment: 87-181 9.5e-26 tRNA splicing endonuclease, C-terminal domain
SCOP assignment: 2-81 3.6e-08 tRNA splicing endonuclease, N-terminal domain