LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Acidobacteria uncultured clone L35893_AD248_D7 >LUAcid_AD248_D7_22 thiamine pyrophosphate-requiring enzyme MATKKRMSKRTKRGNVKSRRNFMRQAVLGSAGATVAALGTAGVANAAEEDVKPIVVPSEF EKSKRATLPTVDFPMSGAQVFARACKEEGVKGLFCCPGNYDVVHAIMDTGIPTYSGRHEG SLCHAADAFCRATGEVAATSGTEGPGFTDMIGAISAANSARSPILVLASNKTIFAEDTEQ GIQDQYQQPLTEGIKKYGKRLITPSRTWEYAGYAFRQLKGGVPKPVHIDFPAEIARARFD DATELEFFYDKTKYRTETKPHPDPKAIDRAVQMLRTAERPIIVSSNGVFYSKAWSALRRL AERAQIPVVESGAMKGQFPADHELSVDAAPMALMSADVVLLVGQYCMPTLGEFAFGPDTR YIRIDPEAEDIGRNLPIDLGIVSDERAALEALADAMPRQRHEAWVREVAQARQAFEAENE EYYQTGLTYTDAVHPAVIAKELADFVHNGEIPPDRTTILQGGYGIARYTRRYLRSFRPGQ IVNGAYQYGAIGPDVGYTVGVAAAVRHGIGAQADFQGHPIIAVTGDAGFGYTAMELETLS KYRLPAVLIVYNNNAWGTWSGQANNTLGLPVHLFQENLRYDKLGEALGTHGEYVTKAAEM RPALERAYQVALDESRPSIINVQAKKEFWQRDQYPPGFLGKVEPGVMSYYH

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)

^__________ GenBank id: 100000140303 Gene name: COG: E Amino acid transport and metabolism Taxon: 114706 Lineage: Bacteria: Acidobacteria: Acidobacteriia: Acidobacteriales: Acidobacteriaceae: Acidobacterium: environmental samples: uncultured Acidobacterium sp.
^__________