Genomapper BLAST  psiBLAST  Mulalbla  Multalin  Genes & Genomes  BLAST (restricted)  Genome Guts  COG Guess  INTERPROScan  CDD search  Pattern search  Sequence Patterns  COG Trees  Genome Syntenizer
Pyrococcus abyssi
>PAB2163 RPA41 subunit of the hetero-oligomeric complex involved in homologous recombination
MVNVKNRNILRYSKVVDMTVLTKDRIIEIIERKTGMSREEIEEEIRKIMEEDPYLSEQGAAALLAERLGIDLIEKEEVSL
MRISELYPGMDPREVNVVGRVLKKYPPREYTRKDGSVGRVASLIIYDDSGRARVVLWDAKVSEYYNKIEVGDVIKVLDAQ
VKESLSGLPELHINFRARIILNPDDPRVEMIPPLEEVRVATYTRKKIKDIEAGDRFVEVRGTIAKVYRVLTYDACPECKK
KVDYDEGLGVWICPEHGEVQPIKMTILDFGLDDGTGYIRVTLFGDDAEELLGVSPEEIAEKIKELEESGLTTKEAARKLA
EDEFYNIIGREIVVRGNVIEDRFLGLILRASSWEDVDYRREIERIKEELEKLGVM

Supplementary options
Additional orf sequence data See Genomic Environment
Search GenBank with PSI-Blast at NCBI Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE Search CDD Database at LBMGE
Determine COG functional Category (microbial) Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base
__________ GenBank id: 14520503 Gene name: - COG: L COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
__________