LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB0154 tldD-like modulator of DNA gyrase, tldD protein homolog MIDELRNLIEKYSNEVKFMDIRFENTIYTEFTVENGKVEGVESNEEVGIGVRVLINGWGFASTNDLSKLEDTIKMAIKLA KVSNAEVPLYVGNPVEGKAIIKQKKDFLDVDLEEKTKLGLEVEKMIRRDKIKTSRFSYSDFVTRKIYLNSEGSVIETVVP RIYFSLSAVARSADIMQTYWKSFGGTVGWELVESVDFNYWANFISSKALSLLSARSPPSGEMPIIMDPELAGVFIHEALG HAVEADSVRQGESILSGMIGKKIGSEELTVIDDPTLPGKFGSYVYDDEGLPGKRVEIIKDGVLLNYLNDRETSKALNLVP NGHGRAQSYAHVPLVRMSNTYIAPGEWTLEEMFEEVKFGVYMIGDKGGQVDIANGSFMFGAKEGYIIKEGEIKEQVRDVG ISGNILDTLKEIKAVGRDLKIEFPGFCGKGQWVPVDDGGPHVLVKAIVGGRE

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14520446 Gene name: tldD COG: R COG0312 Predicted Zn-dependent proteases and their inactivated homologs Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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